Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:33:37 (2667049): wrapper (7.7.26015): starting
20:33:37 (2667049): wrapper: running run_atlas (--nthreads 6)
[2025-10-13 20:33:37] Arguments: --nthreads 6
[2025-10-13 20:33:37] Threads: 6
[2025-10-13 20:33:37] Checking for CVMFS
[2025-10-13 20:33:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 20:33:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 20:33:37] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 20:33:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 20:33:37] 2.11.5.0 3102357 5207 88076 151660 3 57 42917701 52428800 101 130560 0 11737034 99.997 185907 15 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.35.143:3126 1
[2025-10-13 20:33:37] CVMFS is ok
[2025-10-13 20:33:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 20:33:37] Checking for apptainer binary...
[2025-10-13 20:33:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 20:33:37] Running /usr/bin/apptainer --version
[2025-10-13 20:33:37] apptainer version 1.3.6-1.el9
[2025-10-13 20:33:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 20:33:38] testio002
[2025-10-13 20:33:38] apptainer works
[2025-10-13 20:33:38] Set ATHENA_PROC_NUMBER=6
[2025-10-13 20:33:38] Set ATHENA_CORE_NUMBER=6
[2025-10-13 20:33:38] Starting ATLAS job with PandaID=6840961626
[2025-10-13 20:33:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 21:49:58]  *** The last 200 lines of the pilot log: ***
[2025-10-13 21:49:58] 2025-10-13 12:49:02,206 | INFO     | time since job start (4518s) is within the limit (172800.0s)
[2025-10-13 21:49:58] 2025-10-13 12:49:02,584 | INFO     | monitor loop #346: job 0:6840961626 is in state 'finished'
[2025-10-13 21:49:58] 2025-10-13 12:49:02,584 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 21:49:58] 2025-10-13 12:49:04,211 | INFO     | time since job start (4520s) is within the limit (172800.0s)
[2025-10-13 21:49:58] 2025-10-13 12:49:05,087 | INFO     | monitor loop #347: job 0:6840961626 is in state 'finished'
[2025-10-13 21:49:58] 2025-10-13 12:49:05,087 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 21:49:58] 2025-10-13 12:49:06,216 | INFO     | time since job start (4522s) is within the limit (172800.0s)
[2025-10-13 21:49:58] 2025-10-13 12:49:07,274 | INFO     | PID=2670873 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 21:49:58] 2025-10-13 12:49:07,274 | INFO     | .. there are 2 such processes running
[2025-10-13 21:49:58] 2025-10-13 12:49:07,590 | INFO     | monitor loop #348: job 0:6840961626 is in state 'finished'
[2025-10-13 21:49:58] 2025-10-13 12:49:07,590 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 21:49:58] 2025-10-13 12:49:08,274 | INFO     | time since job start (4524s) is within the limit (172800.0s)
[2025-10-13 21:49:58] 2025-10-13 12:49:10,093 | INFO     | monitor loop #349: job 0:6840961626 is in state 'finished'
[2025-10-13 21:49:58] 2025-10-13 12:49:10,093 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 21:49:58] 2025-10-13 12:49:10,280 | INFO     | time since job start (4526s) is within the limit (172800.0s)
[2025-10-13 21:49:58] 2025-10-13 12:49:12,285 | INFO     | time since job start (4528s) is within the limit (172800.0s)
[2025-10-13 21:49:58] 2025-10-13 12:49:12,596 | INFO     | monitor loop #350: job 0:6840961626 is in state 'finished'
[2025-10-13 21:49:58] 2025-10-13 12:49:12,596 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 21:49:58] 2025-10-13 12:49:14,291 | INFO     | time since job start (4530s) is within the limit (172800.0s)
[2025-10-13 21:49:58] 2025-10-13 12:49:15,099 | INFO     | monitor loop #351: job 0:6840961626 is in state 'finished'
[2025-10-13 21:49:58] 2025-10-13 12:49:15,099 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 21:49:58] 2025-10-13 12:49:16,296 | INFO     | time since job start (4532s) is within the limit (172800.0s)
[2025-10-13 21:49:58] 2025-10-13 12:49:17,602 | INFO     | monitor loop #352: job 0:6840961626 is in state 'finished'
[2025-10-13 21:49:58] 2025-10-13 12:49:17,602 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 21:49:58] 2025-10-13 12:49:18,301 | INFO     | time since job start (4534s) is within the limit (172800.0s)
[2025-10-13 21:49:58] 2025-10-13 12:49:20,105 | INFO     | monitor loop #353: job 0:6840961626 is in state 'finished'
[2025-10-13 21:49:58] 2025-10-13 12:49:20,105 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 21:49:58] 2025-10-13 12:49:20,306 | INFO     | time since job start (4536s) is within the limit (172800.0s)
[2025-10-13 21:49:58] 2025-10-13 12:49:22,311 | INFO     | time since job start (4538s) is within the limit (172800.0s)
[2025-10-13 21:49:58] 2025-10-13 12:49:22,608 | INFO     | monitor loop #354: job 0:6840961626 is in state 'finished'
[2025-10-13 21:49:58] 2025-10-13 12:49:22,608 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 21:49:58] 2025-10-13 12:49:24,316 | INFO     | time since job start (4540s) is within the limit (172800.0s)
[2025-10-13 21:49:58] 2025-10-13 12:49:25,111 | INFO     | monitor loop #355: job 0:6840961626 is in state 'finished'
[2025-10-13 21:49:58] 2025-10-13 12:49:25,111 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 21:49:58] 2025-10-13 12:49:25,860 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 21:49:58] 2025-10-13 12:49:25,861 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4199.5753125
[2025-10-13 21:49:58] 2025-10-13 12:49:25,862 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6840961626/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 21:49:58] 2025-10-13 12:49:25,862 | INFO     | extracted standard info from prmon json
[2025-10-13 21:49:58] 2025-10-13 12:49:25,862 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 21:49:58] 2025-10-13 12:49:25,862 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 21:49:58] 2025-10-13 12:49:25,862 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 21:49:58] 2025-10-13 12:49:25,862 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 21:49:58] 2025-10-13 12:49:25,863 | INFO     | fitting pss+swap vs Time
[2025-10-13 21:49:58] 2025-10-13 12:49:25,863 | INFO     | sum of square deviations: 89127252.5
[2025-10-13 21:49:58] 2025-10-13 12:49:25,863 | INFO     | sum of deviations: -5432812591.500001
[2025-10-13 21:49:58] 2025-10-13 12:49:25,863 | INFO     | mean x: 1760357528.5
[2025-10-13 21:49:58] 2025-10-13 12:49:25,863 | INFO     | mean y: 2529292.196969697
[2025-10-13 21:49:58] 2025-10-13 12:49:25,863 | INFO     | -- intersect: 107306325584.7689
[2025-10-13 21:49:58] 2025-10-13 12:49:25,863 | INFO     | intersect: 107306325584.7689
[2025-10-13 21:49:58] 2025-10-13 12:49:25,863 | INFO     | chi2: 0.030744663748923404
[2025-10-13 21:49:58] 2025-10-13 12:49:25,863 | INFO     | -- intersect: 107306325584.7689
[2025-10-13 21:49:58] 2025-10-13 12:49:25,863 | INFO     | current memory leak: -60.96 B/s (using 66 data points, chi2=0.03)
[2025-10-13 21:49:58] 2025-10-13 12:49:25,863 | INFO     | could have reported an average CPU frequency of 4278 MHz (6 samples)
[2025-10-13 21:49:58] 2025-10-13 12:49:25,863 | INFO     | ..............................
[2025-10-13 21:49:58] 2025-10-13 12:49:25,863 | INFO     | . Timing measurements:
[2025-10-13 21:49:58] 2025-10-13 12:49:25,863 | INFO     | . get job = 0 s
[2025-10-13 21:49:58] 2025-10-13 12:49:25,863 | INFO     | . initial setup = 4 s
[2025-10-13 21:49:58] 2025-10-13 12:49:25,863 | INFO     | . payload setup = 1 s
[2025-10-13 21:49:58] 2025-10-13 12:49:25,863 | INFO     | . stage-in = 0 s
[2025-10-13 21:49:58] 2025-10-13 12:49:25,863 | INFO     | . payload execution = 4450 s
[2025-10-13 21:49:58] 2025-10-13 12:49:25,863 | INFO     | . stage-out = 0 s
[2025-10-13 21:49:58] 2025-10-13 12:49:25,863 | INFO     | . log creation = 0 s
[2025-10-13 21:49:58] 2025-10-13 12:49:25,863 | INFO     | ..............................
[2025-10-13 21:49:58] 2025-10-13 12:49:25,893 | INFO     | 
[2025-10-13 21:49:58] 2025-10-13 12:49:25,893 | INFO     | job summary report
[2025-10-13 21:49:58] 2025-10-13 12:49:25,893 | INFO     | --------------------------------------------------
[2025-10-13 21:49:58] 2025-10-13 12:49:25,893 | INFO     | PanDA job id: 6840961626
[2025-10-13 21:49:58] 2025-10-13 12:49:25,893 | INFO     | task id: 46676269
[2025-10-13 21:49:58] 2025-10-13 12:49:25,893 | INFO     | errors: (none)
[2025-10-13 21:49:58] 2025-10-13 12:49:25,893 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 21:49:58] 2025-10-13 12:49:25,893 | INFO     | pilot state: finished 
[2025-10-13 21:49:58] 2025-10-13 12:49:25,893 | INFO     | transexitcode: 0
[2025-10-13 21:49:58] 2025-10-13 12:49:25,893 | INFO     | exeerrorcode: 0
[2025-10-13 21:49:58] 2025-10-13 12:49:25,893 | INFO     | exeerrordiag: 
[2025-10-13 21:49:58] 2025-10-13 12:49:25,893 | INFO     | exitcode: 0
[2025-10-13 21:49:58] 2025-10-13 12:49:25,893 | INFO     | exitmsg: OK
[2025-10-13 21:49:58] 2025-10-13 12:49:25,893 | INFO     | cpuconsumptiontime: 24460 s
[2025-10-13 21:49:58] 2025-10-13 12:49:25,893 | INFO     | nevents: 400
[2025-10-13 21:49:58] 2025-10-13 12:49:25,893 | INFO     | neventsw: 0
[2025-10-13 21:49:58] 2025-10-13 12:49:25,894 | INFO     | pid: 2677688
[2025-10-13 21:49:58] 2025-10-13 12:49:25,894 | INFO     | pgrp: 2677688
[2025-10-13 21:49:58] 2025-10-13 12:49:25,894 | INFO     | corecount: 6
[2025-10-13 21:49:58] 2025-10-13 12:49:25,894 | INFO     | event service: False
[2025-10-13 21:49:58] 2025-10-13 12:49:25,894 | INFO     | sizes: {0: 2348857, 1: 2349119, 10: 2349147, 4456: 2384301, 4529: 2384439}
[2025-10-13 21:49:58] 2025-10-13 12:49:25,894 | INFO     | --------------------------------------------------
[2025-10-13 21:49:58] 2025-10-13 12:49:25,894 | INFO     | 
[2025-10-13 21:49:58] 2025-10-13 12:49:25,894 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-10-13 21:49:58] 2025-10-13 12:49:25,903 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 21:49:58] 2025-10-13 12:49:25,903 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 21:49:58] 2025-10-13 12:49:25,903 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 21:49:58] 2025-10-13 12:49:25,903 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 21:49:58] 2025-10-13 12:49:25,903 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 21:49:58] 2025-10-13 12:49:25,903 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 21:49:58] 2025-10-13 12:49:25,903 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 21:49:58] 2025-10-13 12:49:25,903 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 21:49:58] 2025-10-13 12:49:25,903 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 21:49:58] 2025-10-13 12:49:25,903 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 21:49:58] 2025-10-13 12:49:25,903 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 21:49:58] 2025-10-13 12:49:25,903 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 21:49:58] 2025-10-13 12:49:25,903 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 21:49:58] 2025-10-13 12:49:25,904 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 21:49:58] 2025-10-13 12:49:25,904 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 21:49:58] 2025-10-13 12:49:25,904 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 21:49:58] 2025-10-13 12:49:25,904 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 21:49:58] 2025-10-13 12:49:25,904 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 21:49:58] 2025-10-13 12:49:25,904 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 21:49:58] 2025-10-13 12:49:25,904 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 21:49:58] 2025-10-13 12:49:25,904 | INFO     | job 6840961626 has completed (purged errors)
[2025-10-13 21:49:58] 2025-10-13 12:49:25,904 | INFO     | overall cleanup function is called
[2025-10-13 21:49:58] 2025-10-13 12:49:26,910 | INFO     | --- collectZombieJob: --- 10, [2677688]
[2025-10-13 21:49:58] 2025-10-13 12:49:26,910 | INFO     | zombie collector waiting for pid 2677688
[2025-10-13 21:49:58] 2025-10-13 12:49:26,910 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 21:49:58] 2025-10-13 12:49:26,910 | INFO     | collected zombie processes
[2025-10-13 21:49:58] 2025-10-13 12:49:26,910 | INFO     | will attempt to kill all subprocesses of pid=2677688
[2025-10-13 21:49:58] 2025-10-13 12:49:26,968 | INFO     | process IDs to be killed: [2677688] (in reverse order)
[2025-10-13 21:49:58] 2025-10-13 12:49:26,989 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 21:49:58] 2025-10-13 12:49:26,989 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 21:49:58] 2025-10-13 12:49:26,991 | INFO     | did not find any defunct processes belonging to 2677688
[2025-10-13 21:49:58] 2025-10-13 12:49:26,993 | INFO     | did not find any defunct processes belonging to 2677688
[2025-10-13 21:49:58] 2025-10-13 12:49:26,993 | INFO     | ready for new job
[2025-10-13 21:49:58] 2025-10-13 12:49:26,993 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 21:49:58] 2025-10-13 12:49:26,994 | INFO     | ***************************************
[2025-10-13 21:49:58] 2025-10-13 12:49:26,994 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 21:49:58] 2025-10-13 12:49:26,994 | INFO     | ***************************************
[2025-10-13 21:49:58] 2025-10-13 12:49:26,994 | INFO     | 
[2025-10-13 21:49:58] 2025-10-13 12:49:26,995 | INFO     | architecture information:
[2025-10-13 21:49:58] 2025-10-13 12:49:26,995 | INFO     | executing command: cat /etc/os-release
[2025-10-13 21:49:58] 2025-10-13 12:49:27,002 | INFO     | cat /etc/os-release:
[2025-10-13 21:49:58] NAME="CentOS Linux"
[2025-10-13 21:49:58] VERSION="7 (Core)"
[2025-10-13 21:49:58] ID="centos"
[2025-10-13 21:49:58] ID_LIKE="rhel fedora"
[2025-10-13 21:49:58] VERSION_ID="7"
[2025-10-13 21:49:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 21:49:58] ANSI_COLOR="0;31"
[2025-10-13 21:49:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 21:49:58] HOME_URL="https://www.centos.org/"
[2025-10-13 21:49:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 21:49:58] 
[2025-10-13 21:49:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 21:49:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 21:49:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 21:49:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 21:49:58] 
[2025-10-13 21:49:58] 2025-10-13 12:49:27,002 | INFO     | ***************************************
[2025-10-13 21:49:58] 2025-10-13 12:49:27,505 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-10-13 21:49:58] 2025-10-13 12:49:27,513 | INFO     | sufficient remaining disk space (301710966784 B)
[2025-10-13 21:49:58] 2025-10-13 12:49:27,513 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 21:49:58] 2025-10-13 12:49:27,513 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 21:49:58] 2025-10-13 12:49:27,513 | INFO     | update_server=False
[2025-10-13 21:49:58] 2025-10-13 12:49:27,513 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 21:49:58] 2025-10-13 12:49:27,513 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 21:49:58] 2025-10-13 12:49:27,514 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:49:58] 2025-10-13 12:49:27,514 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 21:49:58] 2025-10-13 12:49:27,614 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 21:49:58] 2025-10-13 12:49:27,614 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 21:49:58] 2025-10-13 12:49:27,614 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:49:58] 2025-10-13 12:49:27,614 | INFO     | will abort loop
[2025-10-13 21:49:58] 2025-10-13 12:49:27,912 | INFO     | all data control threads have been joined
[2025-10-13 21:49:58] 2025-10-13 12:49:28,062 | INFO     | all job control threads have been joined
[2025-10-13 21:49:58] 2025-10-13 12:49:28,519 | INFO     | [job] retrieve thread has finished
[2025-10-13 21:49:58] 2025-10-13 12:49:28,519 | INFO     | [job] queue monitor thread has finished
[2025-10-13 21:49:58] 2025-10-13 12:49:28,595 | INFO     | all payload control threads have been joined
[2025-10-13 21:49:58] 2025-10-13 12:49:28,619 | INFO     | [job] job monitor thread has finished
[2025-10-13 21:49:58] 2025-10-13 12:49:28,917 | INFO     | [data] control thread has finished
[2025-10-13 21:49:58] 2025-10-13 12:49:29,067 | INFO     | [job] control thread has finished
[2025-10-13 21:49:58] 2025-10-13 12:49:29,198 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 21:49:58] 2025-10-13 12:49:29,283 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 21:49:58] 2025-10-13 12:49:29,479 | INFO     | [payload] validate_post thread has finished
[2025-10-13 21:49:58] 2025-10-13 12:49:29,519 | INFO     | [data] copytool_out thread has finished
[2025-10-13 21:49:58] 2025-10-13 12:49:29,600 | INFO     | [payload] control thread has finished
[2025-10-13 21:49:58] 2025-10-13 12:49:29,757 | INFO     | [job] validate thread has finished
[2025-10-13 21:49:58] 2025-10-13 12:49:29,870 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 21:49:58] 2025-10-13 12:49:29,913 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 21:49:58] 2025-10-13 12:49:29,941 | INFO     | [data] copytool_in thread has finished
[2025-10-13 21:49:58] 2025-10-13 12:49:30,043 | INFO     | [payload] failed_post thread has finished
[2025-10-13 21:49:58] 2025-10-13 12:49:31,519 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 21:49:58] 2025-10-13 12:49:51,846 | INFO     | [monitor] cgroup control has ended
[2025-10-13 21:49:58] 2025-10-13 12:49:53,432 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139763750016832)>', '<ExcThread(monitor, started 139763117971200)>']
[2025-10-13 21:49:58] 2025-10-13 12:49:57,417 | INFO     | PID=2670873 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 21:49:58] 2025-10-13 12:49:57,417 | INFO     | .. there are 2 such processes running
[2025-10-13 21:49:58] 2025-10-13 12:49:57,418 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 21:49:58] 2025-10-13 12:49:57,418 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 21:49:58] 2025-10-13 12:49:57,418 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 21:49:58] 2025-10-13 12:49:57,418 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 21:49:58] 2025-10-13 12:49:57,418 | INFO     | [monitor] control thread has ended
[2025-10-13 21:49:58] 2025-10-13 12:49:58,457 | INFO     | all workflow threads have been joined
[2025-10-13 21:49:58] 2025-10-13 12:49:58,457 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 21:49:58] 2025-10-13 12:49:58,457 | INFO     | traces error code: 0
[2025-10-13 21:49:58] 2025-10-13 12:49:58,457 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 21:49:58] 2025-10-13 12:49:58,509 [wrapper] ==== pilot stdout END ====
[2025-10-13 21:49:58] 2025-10-13 12:49:58,510 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 21:49:58] 2025-10-13 12:49:58,510 [wrapper] pilotpid: 2670873
[2025-10-13 21:49:58] 2025-10-13 12:49:58,511 [wrapper] Pilot exit status: 0
[2025-10-13 21:49:58] 2025-10-13 12:49:58,515 [wrapper] pandaids: 6840961626
[2025-10-13 21:49:58] 2025-10-13 12:49:58,523 [wrapper] cleanup supervisor_pilot 2711803 2670874
[2025-10-13 21:49:58] 2025-10-13 12:49:58,524 [wrapper] Test setup, not cleaning
[2025-10-13 21:49:58] 2025-10-13 12:49:58,525 [wrapper] apfmon messages muted
[2025-10-13 21:49:58] 2025-10-13 12:49:58,526 [wrapper] ==== wrapper stdout END ====
[2025-10-13 21:49:58] 2025-10-13 12:49:58,526 [wrapper] ==== wrapper stderr END ====
[2025-10-13 21:49:58]  *** Error codes and diagnostics ***
[2025-10-13 21:49:58]     "exeErrorCode": 0,
[2025-10-13 21:49:58]     "exeErrorDiag": "",
[2025-10-13 21:49:58]     "pilotErrorCode": 0,
[2025-10-13 21:49:58]     "pilotErrorDiag": "",
[2025-10-13 21:49:58]  *** Listing of results directory ***
[2025-10-13 21:49:58] total 415168
[2025-10-13 21:49:58] -rw-r--r--. 1 boinc boinc    557409 Oct 13 07:57 pilot3.tar.gz
[2025-10-13 21:49:58] -rw-r--r--. 1 boinc boinc      5112 Oct 13 08:08 queuedata.json
[2025-10-13 21:49:58] -rwx------. 1 boinc boinc     36292 Oct 13 08:09 runpilot2-wrapper.sh
[2025-10-13 21:49:58] -rw-r--r--. 1 boinc boinc       100 Oct 13 20:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 21:49:58] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 20:33 run_atlas
[2025-10-13 21:49:58] -rw-r--r--. 1 boinc boinc       105 Oct 13 20:33 job.xml
[2025-10-13 21:49:58] -rw-r--r--. 2 boinc boinc     15120 Oct 13 20:33 start_atlas.sh
[2025-10-13 21:49:58] drwxrwx--x. 2 boinc boinc        68 Oct 13 20:33 shared
[2025-10-13 21:49:58] -rw-r--r--. 2 boinc boinc    569678 Oct 13 20:33 input.tar.gz
[2025-10-13 21:49:58] -rw-r--r--. 1 boinc boinc      9628 Oct 13 20:33 init_data.xml
[2025-10-13 21:49:58] -rw-r--r--. 2 boinc boinc 220336227 Oct 13 20:33 EVNT.46676267._004646.pool.root.1
[2025-10-13 21:49:58] -rw-r--r--. 1 boinc boinc         0 Oct 13 20:33 boinc_lockfile
[2025-10-13 21:49:58] -rw-r--r--. 1 boinc boinc      2550 Oct 13 20:33 pandaJob.out
[2025-10-13 21:49:58] -rw-------. 1 boinc boinc    972497 Oct 13 20:33 agis_schedconf.cvmfs.json
[2025-10-13 21:49:58] -rw-------. 1 boinc boinc   1560580 Oct 13 20:33 agis_ddmendpoints.agis.ALL.json
[2025-10-13 21:49:58] drwx------. 5 boinc boinc      4096 Oct 13 20:33 pilot3
[2025-10-13 21:49:58] -rw-------. 1 boinc boinc 198969194 Oct 13 21:47 HITS.46676269._091912.pool.root.1
[2025-10-13 21:49:58] -rw-------. 1 boinc boinc      1026 Oct 13 21:48 memory_monitor_summary.json
[2025-10-13 21:49:58] -rw-r--r--. 1 boinc boinc       529 Oct 13 21:48 boinc_task_state.xml
[2025-10-13 21:49:58] -rw-------. 1 boinc boinc    295387 Oct 13 21:48 log.46676269._091912.job.log.tgz.1
[2025-10-13 21:49:58] -rw-------. 1 boinc boinc        95 Oct 13 21:49 pilot_heartbeat.json
[2025-10-13 21:49:58] -rw-------. 1 boinc boinc      7794 Oct 13 21:49 heartbeat.json
[2025-10-13 21:49:58] -rw-r--r--. 1 boinc boinc        27 Oct 13 21:49 wrapper_checkpoint.txt
[2025-10-13 21:49:58] -rw-r--r--. 1 boinc boinc      8192 Oct 13 21:49 boinc_mmap_file
[2025-10-13 21:49:58] -rw-------. 1 boinc boinc      5010 Oct 13 21:49 pilotlog.txt
[2025-10-13 21:49:58] -rw-------. 1 boinc boinc    673420 Oct 13 21:49 log.46676269._091912.job.log.1
[2025-10-13 21:49:58] -rw-------. 1 boinc boinc       357 Oct 13 21:49 output.list
[2025-10-13 21:49:58] -rw-r--r--. 1 boinc boinc       620 Oct 13 21:49 runtime_log
[2025-10-13 21:49:58] -rw-------. 1 boinc boinc    983040 Oct 13 21:49 result.tar.gz
[2025-10-13 21:49:58] -rw-r--r--. 1 boinc boinc      8661 Oct 13 21:49 runtime_log.err
[2025-10-13 21:49:58] -rw-------. 1 boinc boinc       642 Oct 13 21:49 gzhLDmwMKS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmlFVMDmMYAeXm.diag
[2025-10-13 21:49:58] -rw-r--r--. 1 boinc boinc     21920 Oct 13 21:49 stderr.txt
[2025-10-13 21:49:58] HITS file was successfully produced:
[2025-10-13 21:49:58] -rw-------. 1 boinc boinc 198969194 Oct 13 21:47 shared/HITS.pool.root.1
[2025-10-13 21:49:58]  *** Contents of shared directory: ***
[2025-10-13 21:49:58] total 411020
[2025-10-13 21:49:58] -rw-r--r--. 2 boinc boinc     15120 Oct 13 20:33 start_atlas.sh
[2025-10-13 21:49:58] -rw-r--r--. 2 boinc boinc    569678 Oct 13 20:33 input.tar.gz
[2025-10-13 21:49:58] -rw-r--r--. 2 boinc boinc 220336227 Oct 13 20:33 ATLAS.root_0
[2025-10-13 21:49:58] -rw-------. 1 boinc boinc 198969194 Oct 13 21:47 HITS.pool.root.1
[2025-10-13 21:49:58] -rw-------. 1 boinc boinc    983040 Oct 13 21:49 result.tar.gz
21:50:00 (2667049): run_atlas exited; CPU time 24479.994425
21:50:00 (2667049): called boinc_finish(0)

</stderr_txt>
]]>

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