Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:58:07 (2809192): wrapper (7.7.26015): starting
14:58:07 (2809192): wrapper: running run_atlas (--nthreads 2)
[2025-10-13 14:58:07] Arguments: --nthreads 2
[2025-10-13 14:58:07] Threads: 2
[2025-10-13 14:58:07] Checking for CVMFS
[2025-10-13 14:58:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 14:58:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 14:58:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 14:58:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 14:58:07] 2.9.2.0 1455021 5893 58852 151661 2 57 26099276 36864000 0 130560 0 3573619 99.989 197885 897 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 14:58:07] CVMFS is ok
[2025-10-13 14:58:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 14:58:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 14:58:07] Further information can be found at the LHC@home message board.
[2025-10-13 14:58:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 14:58:07] Checking for apptainer binary...
[2025-10-13 14:58:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 14:58:07] Running /usr/bin/apptainer --version
[2025-10-13 14:58:07] apptainer version 1.4.1-1.1
[2025-10-13 14:58:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 14:58:07] belleA253a
[2025-10-13 14:58:07] apptainer works
[2025-10-13 14:58:07] Set ATHENA_PROC_NUMBER=2
[2025-10-13 14:58:07] Set ATHENA_CORE_NUMBER=2
[2025-10-13 14:58:07] Starting ATLAS job with PandaID=6840961522
[2025-10-13 14:58:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 17:05:41]  *** The last 200 lines of the pilot log: ***
[2025-10-13 17:05:41] 2025-10-13 15:05:25,884 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 17:05:41] 2025-10-13 15:05:26,489 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 17:05:41] 2025-10-13 15:05:26,490 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 3215.950875
[2025-10-13 17:05:41] 2025-10-13 15:05:26,491 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6840961522/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 17:05:41] 2025-10-13 15:05:26,491 | INFO     | extracted standard info from prmon json
[2025-10-13 17:05:41] 2025-10-13 15:05:26,491 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 17:05:41] 2025-10-13 15:05:26,491 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 17:05:41] 2025-10-13 15:05:26,491 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 17:05:41] 2025-10-13 15:05:26,491 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 17:05:41] 2025-10-13 15:05:26,492 | INFO     | fitting pss+swap vs Time
[2025-10-13 17:05:41] 2025-10-13 15:05:26,493 | INFO     | sum of square deviations: 605592750.0
[2025-10-13 17:05:41] 2025-10-13 15:05:26,493 | INFO     | sum of deviations: 2458511913.9999995
[2025-10-13 17:05:41] 2025-10-13 15:05:26,493 | INFO     | mean x: 1760364109.0
[2025-10-13 17:05:41] 2025-10-13 15:05:26,493 | INFO     | mean y: 2304999.424
[2025-10-13 17:05:41] 2025-10-13 15:05:26,493 | INFO     | -- intersect: -7144207462.877594
[2025-10-13 17:05:41] 2025-10-13 15:05:26,493 | INFO     | intersect: -7144207462.877594
[2025-10-13 17:05:41] 2025-10-13 15:05:26,493 | INFO     | chi2: 1.5144760621324906
[2025-10-13 17:05:41] 2025-10-13 15:05:26,493 | INFO     | sum of square deviations: 535786790.0
[2025-10-13 17:05:41] 2025-10-13 15:05:26,494 | INFO     | sum of deviations: 2267632025.5000005
[2025-10-13 17:05:41] 2025-10-13 15:05:26,494 | INFO     | mean x: 1760363956.5
[2025-10-13 17:05:41] 2025-10-13 15:05:26,494 | INFO     | mean y: 2304583.058333333
[2025-10-13 17:05:41] 2025-10-13 15:05:26,494 | INFO     | -- intersect: -7448154739.194255
[2025-10-13 17:05:41] 2025-10-13 15:05:26,494 | INFO     | intersect: -7448154739.194255
[2025-10-13 17:05:41] 2025-10-13 15:05:26,494 | INFO     | chi2: 1.514976419589348
[2025-10-13 17:05:41] 2025-10-13 15:05:26,494 | INFO     | current chi2=1.514976419589348 (change=-0.03303832060262828 %)
[2025-10-13 17:05:41] 2025-10-13 15:05:26,494 | INFO     | right removable region: 119
[2025-10-13 17:05:41] 2025-10-13 15:05:26,494 | INFO     | sum of square deviations: 535786790.0
[2025-10-13 17:05:41] 2025-10-13 15:05:26,494 | INFO     | sum of deviations: -11691457274.0
[2025-10-13 17:05:41] 2025-10-13 15:05:26,494 | INFO     | mean x: 1760364261.5
[2025-10-13 17:05:41] 2025-10-13 15:05:26,494 | INFO     | mean y: 2335095.6
[2025-10-13 17:05:41] 2025-10-13 15:05:26,494 | INFO     | -- intersect: 38415420177.45469
[2025-10-13 17:05:41] 2025-10-13 15:05:26,494 | INFO     | intersect: 38415420177.45469
[2025-10-13 17:05:41] 2025-10-13 15:05:26,495 | INFO     | chi2: 0.1154529374360071
[2025-10-13 17:05:41] 2025-10-13 15:05:26,495 | INFO     | current chi2=0.1154529374360071 (change=92.37670767318427 %)
[2025-10-13 17:05:41] 2025-10-13 15:05:26,495 | INFO     | sum of square deviations: 471562330.0
[2025-10-13 17:05:41] 2025-10-13 15:05:26,495 | INFO     | sum of deviations: -7408647762.000001
[2025-10-13 17:05:41] 2025-10-13 15:05:26,495 | INFO     | mean x: 1760364414.0
[2025-10-13 17:05:41] 2025-10-13 15:05:26,495 | INFO     | mean y: 2324913.8782608695
[2025-10-13 17:05:41] 2025-10-13 15:05:26,495 | INFO     | -- intersect: 27659156357.741776
[2025-10-13 17:05:41] 2025-10-13 15:05:26,495 | INFO     | intersect: 27659156357.741776
[2025-10-13 17:05:41] 2025-10-13 15:05:26,495 | INFO     | chi2: 0.09111596677462716
[2025-10-13 17:05:41] 2025-10-13 15:05:26,495 | INFO     | current chi2=0.09111596677462716 (change=21.079559517374218 %)
[2025-10-13 17:05:41] 2025-10-13 15:05:26,495 | INFO     | left removable region: 20
[2025-10-13 17:05:41] 2025-10-13 15:05:26,495 | INFO     | sum of square deviations: 300842850.0
[2025-10-13 17:05:41] 2025-10-13 15:05:26,495 | INFO     | sum of deviations: -297871906.0
[2025-10-13 17:05:41] 2025-10-13 15:05:26,495 | INFO     | mean x: 1760364536.0
[2025-10-13 17:05:41] 2025-10-13 15:05:26,495 | INFO     | mean y: 2305024.1414141413
[2025-10-13 17:05:41] 2025-10-13 15:05:26,495 | INFO     | -- intersect: 1745285253.1650577
[2025-10-13 17:05:41] 2025-10-13 15:05:26,495 | INFO     | intersect: 1745285253.1650577
[2025-10-13 17:05:41] 2025-10-13 15:05:26,496 | INFO     | chi2: 0.002705352131798631
[2025-10-13 17:05:41] 2025-10-13 15:05:26,496 | INFO     | -- intersect: 1745285253.1650577
[2025-10-13 17:05:41] 2025-10-13 15:05:26,496 | INFO     | current memory leak: -0.99 B/s (using 99 data points, chi2=0.00)
[2025-10-13 17:05:41] 2025-10-13 15:05:26,496 | INFO     | could have reported an average CPU frequency of 4414 MHz (8 samples)
[2025-10-13 17:05:41] 2025-10-13 15:05:26,496 | INFO     | ..............................
[2025-10-13 17:05:41] 2025-10-13 15:05:26,496 | INFO     | . Timing measurements:
[2025-10-13 17:05:41] 2025-10-13 15:05:26,496 | INFO     | . get job = 0 s
[2025-10-13 17:05:41] 2025-10-13 15:05:26,496 | INFO     | . initial setup = 1 s
[2025-10-13 17:05:41] 2025-10-13 15:05:26,496 | INFO     | . payload setup = 7 s
[2025-10-13 17:05:41] 2025-10-13 15:05:26,496 | INFO     | . stage-in = 0 s
[2025-10-13 17:05:41] 2025-10-13 15:05:26,496 | INFO     | . payload execution = 7590 s
[2025-10-13 17:05:41] 2025-10-13 15:05:26,496 | INFO     | . stage-out = 0 s
[2025-10-13 17:05:41] 2025-10-13 15:05:26,496 | INFO     | . log creation = 0 s
[2025-10-13 17:05:41] 2025-10-13 15:05:26,496 | INFO     | ..............................
[2025-10-13 17:05:41] 2025-10-13 15:05:26,564 | INFO     | time since job start (7626s) is within the limit (172800.0s)
[2025-10-13 17:05:41] 2025-10-13 15:05:26,626 | INFO     | 
[2025-10-13 17:05:41] 2025-10-13 15:05:26,626 | INFO     | job summary report
[2025-10-13 17:05:41] 2025-10-13 15:05:26,626 | INFO     | --------------------------------------------------
[2025-10-13 17:05:41] 2025-10-13 15:05:26,626 | INFO     | PanDA job id: 6840961522
[2025-10-13 17:05:41] 2025-10-13 15:05:26,626 | INFO     | task id: 46676269
[2025-10-13 17:05:41] 2025-10-13 15:05:26,626 | INFO     | errors: (none)
[2025-10-13 17:05:41] 2025-10-13 15:05:26,626 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 17:05:41] 2025-10-13 15:05:26,626 | INFO     | pilot state: finished 
[2025-10-13 17:05:41] 2025-10-13 15:05:26,627 | INFO     | transexitcode: 0
[2025-10-13 17:05:41] 2025-10-13 15:05:26,627 | INFO     | exeerrorcode: 0
[2025-10-13 17:05:41] 2025-10-13 15:05:26,627 | INFO     | exeerrordiag: 
[2025-10-13 17:05:41] 2025-10-13 15:05:26,627 | INFO     | exitcode: 0
[2025-10-13 17:05:41] 2025-10-13 15:05:26,627 | INFO     | exitmsg: OK
[2025-10-13 17:05:41] 2025-10-13 15:05:26,627 | INFO     | cpuconsumptiontime: 14770 s
[2025-10-13 17:05:41] 2025-10-13 15:05:26,627 | INFO     | nevents: 400
[2025-10-13 17:05:41] 2025-10-13 15:05:26,627 | INFO     | neventsw: 0
[2025-10-13 17:05:41] 2025-10-13 15:05:26,627 | INFO     | pid: 2819311
[2025-10-13 17:05:41] 2025-10-13 15:05:26,627 | INFO     | pgrp: 2819311
[2025-10-13 17:05:41] 2025-10-13 15:05:26,627 | INFO     | corecount: 2
[2025-10-13 17:05:41] 2025-10-13 15:05:26,627 | INFO     | event service: False
[2025-10-13 17:05:41] 2025-10-13 15:05:26,627 | INFO     | sizes: {0: 2348854, 7: 2349116, 11: 2349144, 7602: 2385859, 7604: 2385859, 7610: 2386053}
[2025-10-13 17:05:41] 2025-10-13 15:05:26,627 | INFO     | --------------------------------------------------
[2025-10-13 17:05:41] 2025-10-13 15:05:26,627 | INFO     | 
[2025-10-13 17:05:41] 2025-10-13 15:05:26,627 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-13 17:05:41] 2025-10-13 15:05:26,650 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 17:05:41] 2025-10-13 15:05:26,651 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 17:05:41] 2025-10-13 15:05:26,651 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 17:05:41] 2025-10-13 15:05:26,651 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 17:05:41] 2025-10-13 15:05:26,651 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 17:05:41] 2025-10-13 15:05:26,651 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 17:05:41] 2025-10-13 15:05:26,652 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 17:05:41] 2025-10-13 15:05:26,652 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 17:05:41] 2025-10-13 15:05:26,652 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 17:05:41] 2025-10-13 15:05:26,652 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 17:05:41] 2025-10-13 15:05:26,652 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 17:05:41] 2025-10-13 15:05:26,652 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 17:05:41] 2025-10-13 15:05:26,652 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 17:05:41] 2025-10-13 15:05:26,653 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 17:05:41] 2025-10-13 15:05:26,653 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 17:05:41] 2025-10-13 15:05:26,653 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 17:05:41] 2025-10-13 15:05:26,653 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 17:05:41] 2025-10-13 15:05:26,653 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 17:05:41] 2025-10-13 15:05:26,653 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 17:05:41] 2025-10-13 15:05:26,653 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 17:05:41] 2025-10-13 15:05:26,654 | INFO     | job 6840961522 has completed (purged errors)
[2025-10-13 17:05:41] 2025-10-13 15:05:26,654 | INFO     | overall cleanup function is called
[2025-10-13 17:05:41] 2025-10-13 15:05:27,662 | INFO     | --- collectZombieJob: --- 10, [2819311]
[2025-10-13 17:05:41] 2025-10-13 15:05:27,662 | INFO     | zombie collector waiting for pid 2819311
[2025-10-13 17:05:41] 2025-10-13 15:05:27,662 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 17:05:41] 2025-10-13 15:05:27,662 | INFO     | collected zombie processes
[2025-10-13 17:05:41] 2025-10-13 15:05:27,663 | INFO     | will attempt to kill all subprocesses of pid=2819311
[2025-10-13 17:05:41] 2025-10-13 15:05:27,695 | INFO     | process IDs to be killed: [2819311] (in reverse order)
[2025-10-13 17:05:41] 2025-10-13 15:05:27,715 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 17:05:41] 2025-10-13 15:05:27,715 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 17:05:41] 2025-10-13 15:05:27,716 | INFO     | did not find any defunct processes belonging to 2819311
[2025-10-13 17:05:41] 2025-10-13 15:05:27,717 | INFO     | did not find any defunct processes belonging to 2819311
[2025-10-13 17:05:41] 2025-10-13 15:05:27,717 | INFO     | ready for new job
[2025-10-13 17:05:41] 2025-10-13 15:05:27,717 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 17:05:41] 2025-10-13 15:05:27,717 | INFO     | ***************************************
[2025-10-13 17:05:41] 2025-10-13 15:05:27,717 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 17:05:41] 2025-10-13 15:05:27,717 | INFO     | ***************************************
[2025-10-13 17:05:41] 2025-10-13 15:05:27,717 | INFO     | 
[2025-10-13 17:05:41] 2025-10-13 15:05:27,718 | INFO     | architecture information:
[2025-10-13 17:05:41] 2025-10-13 15:05:27,718 | INFO     | executing command: cat /etc/os-release
[2025-10-13 17:05:41] 2025-10-13 15:05:27,726 | INFO     | cat /etc/os-release:
[2025-10-13 17:05:41] NAME="CentOS Linux"
[2025-10-13 17:05:41] VERSION="7 (Core)"
[2025-10-13 17:05:41] ID="centos"
[2025-10-13 17:05:41] ID_LIKE="rhel fedora"
[2025-10-13 17:05:41] VERSION_ID="7"
[2025-10-13 17:05:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 17:05:41] ANSI_COLOR="0;31"
[2025-10-13 17:05:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 17:05:41] HOME_URL="https://www.centos.org/"
[2025-10-13 17:05:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 17:05:41] 
[2025-10-13 17:05:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 17:05:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 17:05:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 17:05:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 17:05:41] 
[2025-10-13 17:05:41] 2025-10-13 15:05:27,726 | INFO     | ***************************************
[2025-10-13 17:05:41] 2025-10-13 15:05:28,230 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 17:05:41] 2025-10-13 15:05:28,242 | INFO     | sufficient remaining disk space (498435358720 B)
[2025-10-13 17:05:41] 2025-10-13 15:05:28,242 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 17:05:41] 2025-10-13 15:05:28,242 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 17:05:41] 2025-10-13 15:05:28,242 | INFO     | update_server=False
[2025-10-13 17:05:41] 2025-10-13 15:05:28,242 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 17:05:41] 2025-10-13 15:05:28,242 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 17:05:41] 2025-10-13 15:05:28,242 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 17:05:41] 2025-10-13 15:05:28,242 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 17:05:41] 2025-10-13 15:05:28,242 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 17:05:41] 2025-10-13 15:05:28,242 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 17:05:41] 2025-10-13 15:05:28,296 | INFO     | all payload control threads have been joined
[2025-10-13 17:05:41] 2025-10-13 15:05:28,388 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 17:05:41] 2025-10-13 15:05:28,389 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 17:05:41] 2025-10-13 15:05:28,389 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 17:05:41] 2025-10-13 15:05:28,390 | INFO     | will abort loop
[2025-10-13 17:05:41] 2025-10-13 15:05:28,396 | INFO     | all data control threads have been joined
[2025-10-13 17:05:41] 2025-10-13 15:05:29,248 | INFO     | [job] retrieve thread has finished
[2025-10-13 17:05:41] 2025-10-13 15:05:29,249 | INFO     | [job] queue monitor thread has finished
[2025-10-13 17:05:41] 2025-10-13 15:05:29,270 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 17:05:41] 2025-10-13 15:05:29,302 | INFO     | [payload] control thread has finished
[2025-10-13 17:05:41] 2025-10-13 15:05:29,393 | INFO     | [job] validate thread has finished
[2025-10-13 17:05:41] 2025-10-13 15:05:29,395 | INFO     | [job] job monitor thread has finished
[2025-10-13 17:05:41] 2025-10-13 15:05:29,402 | INFO     | [data] control thread has finished
[2025-10-13 17:05:41] 2025-10-13 15:05:29,472 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 17:05:41] 2025-10-13 15:05:29,705 | INFO     | [payload] failed_post thread has finished
[2025-10-13 17:05:41] 2025-10-13 15:05:29,738 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 17:05:41] 2025-10-13 15:05:29,869 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 17:05:41] 2025-10-13 15:05:29,918 | INFO     | all job control threads have been joined
[2025-10-13 17:05:41] 2025-10-13 15:05:29,973 | INFO     | [data] copytool_in thread has finished
[2025-10-13 17:05:41] 2025-10-13 15:05:30,602 | INFO     | [payload] validate_post thread has finished
[2025-10-13 17:05:41] 2025-10-13 15:05:30,715 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 17:05:41] 2025-10-13 15:05:30,921 | INFO     | [job] control thread has finished
[2025-10-13 17:05:41] 2025-10-13 15:05:31,083 | INFO     | [monitor] cgroup control has ended
[2025-10-13 17:05:41] 2025-10-13 15:05:31,148 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 17:05:41] 2025-10-13 15:05:31,745 | INFO     | [data] copytool_out thread has finished
[2025-10-13 17:05:41] 2025-10-13 15:05:35,156 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 17:05:41] 2025-10-13 15:05:36,312 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139767226722112)>', '<ExcThread(monitor, started 139766708279040)>']
[2025-10-13 17:05:41] 2025-10-13 15:05:37,289 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 17:05:41] 2025-10-13 15:05:37,290 | INFO     | [monitor] control thread has ended
[2025-10-13 17:05:41] 2025-10-13 15:05:41,338 | INFO     | all workflow threads have been joined
[2025-10-13 17:05:41] 2025-10-13 15:05:41,338 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 17:05:41] 2025-10-13 15:05:41,339 | INFO     | traces error code: 0
[2025-10-13 17:05:41] 2025-10-13 15:05:41,339 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 17:05:41] 2025-10-13 15:05:41,380 [wrapper] ==== pilot stdout END ====
[2025-10-13 17:05:41] 2025-10-13 15:05:41,383 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 17:05:41] 2025-10-13 15:05:41,385 [wrapper] pilotpid: 2812898
[2025-10-13 17:05:41] 2025-10-13 15:05:41,388 [wrapper] Pilot exit status: 0
[2025-10-13 17:05:41] 2025-10-13 15:05:41,393 [wrapper] pandaids: 6840961522
[2025-10-13 17:05:41] 2025-10-13 15:05:41,404 [wrapper] cleanup supervisor_pilot 2833406 2812899
[2025-10-13 17:05:41] 2025-10-13 15:05:41,406 [wrapper] Test setup, not cleaning
[2025-10-13 17:05:41] 2025-10-13 15:05:41,408 [wrapper] apfmon messages muted
[2025-10-13 17:05:41] 2025-10-13 15:05:41,410 [wrapper] ==== wrapper stdout END ====
[2025-10-13 17:05:41] 2025-10-13 15:05:41,412 [wrapper] ==== wrapper stderr END ====
[2025-10-13 17:05:41]  *** Error codes and diagnostics ***
[2025-10-13 17:05:41]     "exeErrorCode": 0,
[2025-10-13 17:05:41]     "exeErrorDiag": "",
[2025-10-13 17:05:41]     "pilotErrorCode": 0,
[2025-10-13 17:05:41]     "pilotErrorDiag": "",
[2025-10-13 17:05:41]  *** Listing of results directory ***
[2025-10-13 17:05:41] total 412448
[2025-10-13 17:05:41] -rw-r--r-- 1 boinc boinc    557409 Oct 13 00:57 pilot3.tar.gz
[2025-10-13 17:05:41] -rw-r--r-- 1 boinc boinc      5112 Oct 13 01:01 queuedata.json
[2025-10-13 17:05:41] -rwx------ 1 boinc boinc     36292 Oct 13 01:01 runpilot2-wrapper.sh
[2025-10-13 17:05:41] -rw-r--r-- 1 boinc boinc       100 Oct 13 14:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 17:05:41] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 14:58 run_atlas
[2025-10-13 17:05:41] -rw-r--r-- 1 boinc boinc       105 Oct 13 14:58 job.xml
[2025-10-13 17:05:41] -rw-r--r-- 2 boinc boinc 222181776 Oct 13 14:58 EVNT.46676267._004643.pool.root.1
[2025-10-13 17:05:41] -rw-r--r-- 2 boinc boinc    569682 Oct 13 14:58 input.tar.gz
[2025-10-13 17:05:41] -rw-r--r-- 2 boinc boinc     15120 Oct 13 14:58 start_atlas.sh
[2025-10-13 17:05:41] drwxrwx--x 2 boinc boinc      4096 Oct 13 14:58 shared
[2025-10-13 17:05:41] -rw-r--r-- 1 boinc boinc         0 Oct 13 14:58 boinc_setup_complete
[2025-10-13 17:05:41] -rw-r--r-- 1 boinc boinc      6209 Oct 13 14:58 init_data.xml
[2025-10-13 17:05:41] -rw-r--r-- 1 boinc boinc         0 Oct 13 14:58 boinc_lockfile
[2025-10-13 17:05:41] -rw-r--r-- 1 boinc boinc      2547 Oct 13 14:58 pandaJob.out
[2025-10-13 17:05:41] -rw------- 1 boinc boinc    972497 Oct 13 14:58 agis_schedconf.cvmfs.json
[2025-10-13 17:05:41] -rw------- 1 boinc boinc   1560580 Oct 13 14:58 agis_ddmendpoints.agis.ALL.json
[2025-10-13 17:05:41] drwx------ 5 boinc boinc      4096 Oct 13 14:58 pilot3
[2025-10-13 17:05:41] -rw------- 1 boinc boinc        95 Oct 13 17:04 pilot_heartbeat.json
[2025-10-13 17:05:41] -rw------- 1 boinc boinc 193536316 Oct 13 17:04 HITS.46676269._091821.pool.root.1
[2025-10-13 17:05:41] -rw-r--r-- 1 boinc boinc       529 Oct 13 17:05 boinc_task_state.xml
[2025-10-13 17:05:41] -rw------- 1 boinc boinc      1015 Oct 13 17:05 memory_monitor_summary.json
[2025-10-13 17:05:41] -rw------- 1 boinc boinc    260390 Oct 13 17:05 log.46676269._091821.job.log.tgz.1
[2025-10-13 17:05:41] -rw------- 1 boinc boinc      7750 Oct 13 17:05 heartbeat.json
[2025-10-13 17:05:41] -rw-r--r-- 1 boinc boinc      8192 Oct 13 17:05 boinc_mmap_file
[2025-10-13 17:05:41] -rw-r--r-- 1 boinc boinc        27 Oct 13 17:05 wrapper_checkpoint.txt
[2025-10-13 17:05:41] -rw------- 1 boinc boinc      4742 Oct 13 17:05 pilotlog.txt
[2025-10-13 17:05:41] -rw------- 1 boinc boinc   1097972 Oct 13 17:05 log.46676269._091821.job.log.1
[2025-10-13 17:05:41] -rw------- 1 boinc boinc       357 Oct 13 17:05 output.list
[2025-10-13 17:05:41] -rw-r--r-- 1 boinc boinc       620 Oct 13 17:05 runtime_log
[2025-10-13 17:05:41] -rw------- 1 boinc boinc   1382400 Oct 13 17:05 result.tar.gz
[2025-10-13 17:05:41] -rw-r--r-- 1 boinc boinc      8797 Oct 13 17:05 runtime_log.err
[2025-10-13 17:05:41] -rw------- 1 boinc boinc       663 Oct 13 17:05 rH7KDmlFKS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm8EVMDmqb89Gm.diag
[2025-10-13 17:05:41] -rw-r--r-- 1 boinc boinc     20999 Oct 13 17:05 stderr.txt
[2025-10-13 17:05:41] HITS file was successfully produced:
[2025-10-13 17:05:41] -rw------- 1 boinc boinc 193536316 Oct 13 17:04 shared/HITS.pool.root.1
[2025-10-13 17:05:41]  *** Contents of shared directory: ***
[2025-10-13 17:05:41] total 407916
[2025-10-13 17:05:41] -rw-r--r-- 2 boinc boinc 222181776 Oct 13 14:58 ATLAS.root_0
[2025-10-13 17:05:41] -rw-r--r-- 2 boinc boinc    569682 Oct 13 14:58 input.tar.gz
[2025-10-13 17:05:41] -rw-r--r-- 2 boinc boinc     15120 Oct 13 14:58 start_atlas.sh
[2025-10-13 17:05:41] -rw------- 1 boinc boinc 193536316 Oct 13 17:04 HITS.pool.root.1
[2025-10-13 17:05:41] -rw------- 1 boinc boinc   1382400 Oct 13 17:05 result.tar.gz
17:05:42 (2809192): run_atlas exited; CPU time 14801.433053
17:05:42 (2809192): called boinc_finish(0)

</stderr_txt>
]]>

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