Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:58 (818985): wrapper (7.7.26015): starting
00:02:58 (818985): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 00:02:58] Arguments: --nthreads 9
[2025-10-13 00:02:58] Threads: 9
[2025-10-13 00:02:58] Checking for CVMFS
[2025-10-13 00:02:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:03:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:03:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:03:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:03:02] 2.13.2.0 4486 36542 402148 151647 2 423 28931622 39288833 13827 16776704 0 60573302 99.521 73621597 31402 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 00:03:02] CVMFS is ok
[2025-10-13 00:03:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:03:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:03:02] Further information can be found at the LHC@home message board.
[2025-10-13 00:03:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:03:02] Checking for apptainer binary...
[2025-10-13 00:03:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:03:02] Running /usr/bin/apptainer --version
[2025-10-13 00:03:02] apptainer version 1.4.3-1.el9
[2025-10-13 00:03:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:03:03] c-211-25.aglt2.org
[2025-10-13 00:03:03] apptainer works
[2025-10-13 00:03:03] Set ATHENA_PROC_NUMBER=9
[2025-10-13 00:03:03] Set ATHENA_CORE_NUMBER=9
[2025-10-13 00:03:03] Starting ATLAS job with PandaID=6840854688
[2025-10-13 00:03:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 15:25:55]  *** The last 200 lines of the pilot log: ***
[2025-10-13 15:25:55] 2025-10-13 19:25:08,774 | INFO     | sum of square deviations: 223041570495.7489
[2025-10-13 15:25:55] 2025-10-13 19:25:08,824 | INFO     | sum of deviations: 679215229263.3884
[2025-10-13 15:25:55] 2025-10-13 19:25:08,824 | INFO     | mean x: 1760355808.483259
[2025-10-13 15:25:55] 2025-10-13 19:25:08,825 | INFO     | mean y: 2543679.359375
[2025-10-13 15:25:55] 2025-10-13 19:25:08,825 | INFO     | -- intersect: -5358163167.290465
[2025-10-13 15:25:55] 2025-10-13 19:25:08,825 | INFO     | intersect: -5358163167.290465
[2025-10-13 15:25:55] 2025-10-13 19:25:08,826 | INFO     | chi2: 4.765017931584495
[2025-10-13 15:25:55] 2025-10-13 19:25:08,826 | INFO     | current chi2=4.765017931584495 (change=31.68904629409095 %)
[2025-10-13 15:25:55] 2025-10-13 19:25:08,832 | INFO     | sum of square deviations: 219328541665.8879
[2025-10-13 15:25:55] 2025-10-13 19:25:08,882 | INFO     | sum of deviations: 673632341871.8512
[2025-10-13 15:25:55] 2025-10-13 19:25:08,884 | INFO     | mean x: 1760355655.9887767
[2025-10-13 15:25:55] 2025-10-13 19:25:08,884 | INFO     | mean y: 2543450.185185185
[2025-10-13 15:25:55] 2025-10-13 19:25:08,884 | INFO     | -- intersect: -5404105835.23935
[2025-10-13 15:25:55] 2025-10-13 19:25:08,884 | INFO     | intersect: -5404105835.23935
[2025-10-13 15:25:55] 2025-10-13 19:25:08,885 | INFO     | chi2: 4.7651973778587635
[2025-10-13 15:25:55] 2025-10-13 19:25:08,890 | INFO     | current chi2=4.7651973778587635 (change=-0.0037659097372732685 %)
[2025-10-13 15:25:55] 2025-10-13 19:25:08,890 | INFO     | right removable region: 890
[2025-10-13 15:25:55] 2025-10-13 19:25:08,891 | INFO     | sum of square deviations: 223041141909.749
[2025-10-13 15:25:55] 2025-10-13 19:25:08,934 | INFO     | sum of deviations: 215195212291.76273
[2025-10-13 15:25:55] 2025-10-13 19:25:08,934 | INFO     | mean x: 1760356113.483259
[2025-10-13 15:25:55] 2025-10-13 19:25:08,934 | INFO     | mean y: 2548140.684151786
[2025-10-13 15:25:55] 2025-10-13 19:25:08,935 | INFO     | -- intersect: -1695883836.0648618
[2025-10-13 15:25:55] 2025-10-13 19:25:08,935 | INFO     | intersect: -1695883836.0648618
[2025-10-13 15:25:55] 2025-10-13 19:25:08,936 | INFO     | chi2: 3.4823224556038346
[2025-10-13 15:25:55] 2025-10-13 19:25:08,936 | INFO     | current chi2=3.4823224556038346 (change=50.0776762083035 %)
[2025-10-13 15:25:55] 2025-10-13 19:25:08,938 | INFO     | sum of square deviations: 219327575669.88794
[2025-10-13 15:25:55] 2025-10-13 19:25:08,945 | INFO     | monitor loop #2692: job 0:6840854688 is in state 'finished'
[2025-10-13 15:25:55] 2025-10-13 19:25:08,945 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 15:25:55] 2025-10-13 19:25:08,967 | INFO     | sum of deviations: 67228875127.22095
[2025-10-13 15:25:55] 2025-10-13 19:25:08,968 | INFO     | mean x: 1760356265.9887767
[2025-10-13 15:25:55] 2025-10-13 19:25:08,968 | INFO     | mean y: 2554211.322109989
[2025-10-13 15:25:55] 2025-10-13 19:25:08,968 | INFO     | -- intersect: -537034899.732969
[2025-10-13 15:25:55] 2025-10-13 19:25:08,968 | INFO     | intersect: -537034899.732969
[2025-10-13 15:25:55] 2025-10-13 19:25:08,970 | INFO     | chi2: 2.504502092188598
[2025-10-13 15:25:55] 2025-10-13 19:25:08,970 | INFO     | current chi2=2.504502092188598 (change=28.079546793310456 %)
[2025-10-13 15:25:55] 2025-10-13 19:25:08,971 | INFO     | sum of square deviations: 215655560893.4442
[2025-10-13 15:25:55] 2025-10-13 19:25:08,979 | INFO     | time since job start (55218s) is within the limit (172800.0s)
[2025-10-13 15:25:55] 2025-10-13 19:25:08,998 | INFO     | sum of deviations: 4275767226.5283737
[2025-10-13 15:25:55] 2025-10-13 19:25:08,999 | INFO     | mean x: 1760356418.4920993
[2025-10-13 15:25:55] 2025-10-13 19:25:08,999 | INFO     | mean y: 2556823.861173815
[2025-10-13 15:25:55] 2025-10-13 19:25:09,000 | INFO     | -- intersect: -32345472.420981534
[2025-10-13 15:25:55] 2025-10-13 19:25:09,000 | INFO     | intersect: -32345472.420981534
[2025-10-13 15:25:55] 2025-10-13 19:25:09,001 | INFO     | chi2: 2.3395170109408845
[2025-10-13 15:25:55] 2025-10-13 19:25:09,001 | INFO     | current chi2=2.3395170109408845 (change=6.5875401646615845 %)
[2025-10-13 15:25:55] 2025-10-13 19:25:09,002 | INFO     | left removable region: 30
[2025-10-13 15:25:55] 2025-10-13 19:25:09,003 | INFO     | sum of square deviations: 197220918164.83243
[2025-10-13 15:25:55] 2025-10-13 19:25:09,035 | INFO     | sum of deviations: 137410917485.74178
[2025-10-13 15:25:55] 2025-10-13 19:25:09,036 | INFO     | mean x: 1760356540.5139534
[2025-10-13 15:25:55] 2025-10-13 19:25:09,036 | INFO     | mean y: 2565849.896511628
[2025-10-13 15:25:55] 2025-10-13 19:25:09,036 | INFO     | -- intersect: -1223937959.0548346
[2025-10-13 15:25:55] 2025-10-13 19:25:09,036 | INFO     | intersect: -1223937959.0548346
[2025-10-13 15:25:55] 2025-10-13 19:25:09,038 | INFO     | chi2: 0.023403977496858203
[2025-10-13 15:25:55] 2025-10-13 19:25:09,038 | INFO     | -- intersect: -1223937959.0548346
[2025-10-13 15:25:55] 2025-10-13 19:25:09,038 | INFO     | current memory leak: 0.70 B/s (using 860 data points, chi2=0.02)
[2025-10-13 15:25:55] 2025-10-13 19:25:09,039 | INFO     | could have reported an average CPU frequency of 2899 MHz (33 samples)
[2025-10-13 15:25:55] 2025-10-13 19:25:09,040 | INFO     | ..............................
[2025-10-13 15:25:55] 2025-10-13 19:25:09,040 | INFO     | . Timing measurements:
[2025-10-13 15:25:55] 2025-10-13 19:25:09,040 | INFO     | . get job = 0 s
[2025-10-13 15:25:55] 2025-10-13 19:25:09,040 | INFO     | . initial setup = 10 s
[2025-10-13 15:25:55] 2025-10-13 19:25:09,040 | INFO     | . payload setup = 62 s
[2025-10-13 15:25:55] 2025-10-13 19:25:09,041 | INFO     | . stage-in = 0 s
[2025-10-13 15:25:55] 2025-10-13 19:25:09,041 | INFO     | . payload execution = 54998 s
[2025-10-13 15:25:55] 2025-10-13 19:25:09,041 | INFO     | . stage-out = 4 s
[2025-10-13 15:25:55] 2025-10-13 19:25:09,041 | INFO     | . log creation = 0 s
[2025-10-13 15:25:55] 2025-10-13 19:25:09,041 | INFO     | ..............................
[2025-10-13 15:25:55] 2025-10-13 19:25:09,291 | INFO     | 
[2025-10-13 15:25:55] 2025-10-13 19:25:09,292 | INFO     | job summary report
[2025-10-13 15:25:55] 2025-10-13 19:25:09,292 | INFO     | --------------------------------------------------
[2025-10-13 15:25:55] 2025-10-13 19:25:09,292 | INFO     | PanDA job id: 6840854688
[2025-10-13 15:25:55] 2025-10-13 19:25:09,292 | INFO     | task id: 46676269
[2025-10-13 15:25:55] 2025-10-13 19:25:09,292 | INFO     | errors: (none)
[2025-10-13 15:25:55] 2025-10-13 19:25:09,293 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 15:25:55] 2025-10-13 19:25:09,293 | INFO     | pilot state: finished 
[2025-10-13 15:25:55] 2025-10-13 19:25:09,293 | INFO     | transexitcode: 0
[2025-10-13 15:25:55] 2025-10-13 19:25:09,293 | INFO     | exeerrorcode: 0
[2025-10-13 15:25:55] 2025-10-13 19:25:09,293 | INFO     | exeerrordiag: 
[2025-10-13 15:25:55] 2025-10-13 19:25:09,293 | INFO     | exitcode: 0
[2025-10-13 15:25:55] 2025-10-13 19:25:09,294 | INFO     | exitmsg: OK
[2025-10-13 15:25:55] 2025-10-13 19:25:09,294 | INFO     | cpuconsumptiontime: 79400 s
[2025-10-13 15:25:55] 2025-10-13 19:25:09,294 | INFO     | nevents: 400
[2025-10-13 15:25:55] 2025-10-13 19:25:09,294 | INFO     | neventsw: 0
[2025-10-13 15:25:55] 2025-10-13 19:25:09,294 | INFO     | pid: 876954
[2025-10-13 15:25:55] 2025-10-13 19:25:09,294 | INFO     | pgrp: 876954
[2025-10-13 15:25:55] 2025-10-13 19:25:09,295 | INFO     | corecount: 9
[2025-10-13 15:25:55] 2025-10-13 19:25:09,295 | INFO     | event service: False
[2025-10-13 15:25:55] 2025-10-13 19:25:09,295 | INFO     | sizes: {0: 2348630, 1: 2348714, 2: 2348913, 3: 2348913, 15: 2348941, 26: 2348969, 37: 2349125, 43: 2349415, 49: 2349443, 55066: 2397519, 55068: 2397518, 55074: 240
[2025-10-13 15:25:55] 2025-10-13 19:25:09,295 | INFO     | --------------------------------------------------
[2025-10-13 15:25:55] 2025-10-13 19:25:09,295 | INFO     | 
[2025-10-13 15:25:55] 2025-10-13 19:25:09,295 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 15:25:55] 2025-10-13 19:25:09,343 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 15:25:55] 2025-10-13 19:25:09,344 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 15:25:55] 2025-10-13 19:25:09,344 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 15:25:55] 2025-10-13 19:25:09,344 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 15:25:55] 2025-10-13 19:25:09,344 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 15:25:55] 2025-10-13 19:25:09,344 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 15:25:55] 2025-10-13 19:25:09,344 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 15:25:55] 2025-10-13 19:25:09,345 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 15:25:55] 2025-10-13 19:25:09,345 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 15:25:55] 2025-10-13 19:25:09,345 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 15:25:55] 2025-10-13 19:25:09,345 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 15:25:55] 2025-10-13 19:25:09,345 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 15:25:55] 2025-10-13 19:25:09,345 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 15:25:55] 2025-10-13 19:25:09,345 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 15:25:55] 2025-10-13 19:25:09,346 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 15:25:55] 2025-10-13 19:25:09,346 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 15:25:55] 2025-10-13 19:25:09,346 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 15:25:55] 2025-10-13 19:25:09,346 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 15:25:55] 2025-10-13 19:25:09,346 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 15:25:55] 2025-10-13 19:25:09,346 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 15:25:55] 2025-10-13 19:25:09,351 | INFO     | job 6840854688 has completed (purged errors)
[2025-10-13 15:25:55] 2025-10-13 19:25:09,351 | INFO     | overall cleanup function is called
[2025-10-13 15:25:55] 2025-10-13 19:25:10,376 | INFO     | --- collectZombieJob: --- 10, [876954]
[2025-10-13 15:25:55] 2025-10-13 19:25:10,376 | INFO     | zombie collector waiting for pid 876954
[2025-10-13 15:25:55] 2025-10-13 19:25:10,376 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 15:25:55] 2025-10-13 19:25:10,376 | INFO     | collected zombie processes
[2025-10-13 15:25:55] 2025-10-13 19:25:10,376 | INFO     | will attempt to kill all subprocesses of pid=876954
[2025-10-13 15:25:55] 2025-10-13 19:25:11,737 | INFO     | process IDs to be killed: [876954] (in reverse order)
[2025-10-13 15:25:55] 2025-10-13 19:25:11,869 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 15:25:55] 2025-10-13 19:25:11,869 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 15:25:55] 2025-10-13 19:25:11,890 | INFO     | did not find any defunct processes belonging to 876954
[2025-10-13 15:25:55] 2025-10-13 19:25:11,907 | INFO     | did not find any defunct processes belonging to 876954
[2025-10-13 15:25:55] 2025-10-13 19:25:11,908 | INFO     | ready for new job
[2025-10-13 15:25:55] 2025-10-13 19:25:11,908 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 15:25:55] 2025-10-13 19:25:11,912 | INFO     | ***************************************
[2025-10-13 15:25:55] 2025-10-13 19:25:11,912 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 15:25:55] 2025-10-13 19:25:11,912 | INFO     | ***************************************
[2025-10-13 15:25:55] 2025-10-13 19:25:11,912 | INFO     | 
[2025-10-13 15:25:55] 2025-10-13 19:25:11,914 | INFO     | architecture information:
[2025-10-13 15:25:55] 2025-10-13 19:25:11,917 | INFO     | executing command: cat /etc/os-release
[2025-10-13 15:25:55] 2025-10-13 19:25:11,975 | INFO     | cat /etc/os-release:
[2025-10-13 15:25:55] NAME="CentOS Linux"
[2025-10-13 15:25:55] VERSION="7 (Core)"
[2025-10-13 15:25:55] ID="centos"
[2025-10-13 15:25:55] ID_LIKE="rhel fedora"
[2025-10-13 15:25:55] VERSION_ID="7"
[2025-10-13 15:25:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 15:25:55] ANSI_COLOR="0;31"
[2025-10-13 15:25:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 15:25:55] HOME_URL="https://www.centos.org/"
[2025-10-13 15:25:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 15:25:55] 
[2025-10-13 15:25:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 15:25:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 15:25:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 15:25:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 15:25:55] 
[2025-10-13 15:25:55] 2025-10-13 19:25:11,975 | INFO     | ***************************************
[2025-10-13 15:25:55] 2025-10-13 19:25:12,479 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 15:25:55] 2025-10-13 19:25:12,556 | INFO     | sufficient remaining disk space (52959379456 B)
[2025-10-13 15:25:55] 2025-10-13 19:25:12,557 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 15:25:55] 2025-10-13 19:25:12,557 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 15:25:55] 2025-10-13 19:25:12,557 | INFO     | update_server=False
[2025-10-13 15:25:55] 2025-10-13 19:25:12,557 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 15:25:55] 2025-10-13 19:25:12,557 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 15:25:55] 2025-10-13 19:25:12,558 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 15:25:55] 2025-10-13 19:25:12,558 | INFO     | aborting loop
[2025-10-13 15:25:55] 2025-10-13 19:25:12,579 | INFO     | all data control threads have been joined
[2025-10-13 15:25:55] 2025-10-13 19:25:12,621 | INFO     | all payload control threads have been joined
[2025-10-13 15:25:55] 2025-10-13 19:25:13,250 | INFO     | all job control threads have been joined
[2025-10-13 15:25:55] 2025-10-13 19:25:13,563 | INFO     | [job] retrieve thread has finished
[2025-10-13 15:25:55] 2025-10-13 19:25:13,571 | INFO     | [job] job monitor thread has finished
[2025-10-13 15:25:55] 2025-10-13 19:25:13,585 | INFO     | [data] control thread has finished
[2025-10-13 15:25:55] 2025-10-13 19:25:13,627 | INFO     | [payload] control thread has finished
[2025-10-13 15:25:55] 2025-10-13 19:25:14,256 | INFO     | [job] control thread has finished
[2025-10-13 15:25:55] 2025-10-13 19:25:14,315 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 15:25:55] 2025-10-13 19:25:14,338 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 15:25:55] 2025-10-13 19:25:14,338 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 15:25:55] 2025-10-13 19:25:14,342 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 15:25:55] 2025-10-13 19:25:14,370 | INFO     | [job] validate thread has finished
[2025-10-13 15:25:55] 2025-10-13 19:25:14,438 | INFO     | [data] copytool_in thread has finished
[2025-10-13 15:25:55] 2025-10-13 19:25:14,441 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 15:25:55] 2025-10-13 19:25:14,607 | INFO     | [data] copytool_out thread has finished
[2025-10-13 15:25:55] 2025-10-13 19:25:14,700 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 15:25:55] 2025-10-13 19:25:15,020 | INFO     | [payload] failed_post thread has finished
[2025-10-13 15:25:55] 2025-10-13 19:25:15,110 | INFO     | [payload] validate_post thread has finished
[2025-10-13 15:25:55] 2025-10-13 19:25:15,447 | INFO     | [job] queue monitor thread has finished
[2025-10-13 15:25:55] 2025-10-13 19:25:18,339 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 15:25:55] 2025-10-13 19:25:44,394 | INFO     | PID=834234 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 15:25:55] 2025-10-13 19:25:44,394 | INFO     | .. there are 22 such processes running
[2025-10-13 15:25:55] 2025-10-13 19:25:44,396 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 15:25:55] 2025-10-13 19:25:44,396 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 15:25:55] 2025-10-13 19:25:44,396 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 15:25:55] 2025-10-13 19:25:47,184 | INFO     | [monitor] cgroup control has ended
[2025-10-13 15:25:55] 2025-10-13 19:25:49,208 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140022264428352)>', '<ExcThread(monitor, started 140021992494848)>']
[2025-10-13 15:25:55] 2025-10-13 19:25:49,439 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 15:25:55] 2025-10-13 19:25:49,439 | INFO     | [monitor] control thread has ended
[2025-10-13 15:25:55] 2025-10-13 19:25:54,238 | INFO     | all workflow threads have been joined
[2025-10-13 15:25:55] 2025-10-13 19:25:54,243 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 15:25:55] 2025-10-13 19:25:54,243 | INFO     | traces error code: 0
[2025-10-13 15:25:55] 2025-10-13 19:25:54,243 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 15:25:55] 2025-10-13 19:25:54,537 [wrapper] ==== pilot stdout END ====
[2025-10-13 15:25:55] 2025-10-13 19:25:54,563 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 15:25:55] 2025-10-13 19:25:54,588 [wrapper] pilotpid: 834234
[2025-10-13 15:25:55] 2025-10-13 19:25:54,610 [wrapper] Pilot exit status: 0
[2025-10-13 15:25:55] 2025-10-13 19:25:54,742 [wrapper] pandaids: 6840854688
[2025-10-13 15:25:55] 2025-10-13 19:25:55,003 [wrapper] cleanup supervisor_pilot 2504623 834235
[2025-10-13 15:25:55] 2025-10-13 19:25:55,023 [wrapper] Test setup, not cleaning
[2025-10-13 15:25:55] 2025-10-13 19:25:55,072 [wrapper] apfmon messages muted
[2025-10-13 15:25:55] 2025-10-13 19:25:55,126 [wrapper] ==== wrapper stdout END ====
[2025-10-13 15:25:55] 2025-10-13 19:25:55,140 [wrapper] ==== wrapper stderr END ====
[2025-10-13 15:25:55]  *** Error codes and diagnostics ***
[2025-10-13 15:25:55]     "exeErrorCode": 0,
[2025-10-13 15:25:55]     "exeErrorDiag": "",
[2025-10-13 15:25:55]     "pilotErrorCode": 0,
[2025-10-13 15:25:55]     "pilotErrorDiag": "",
[2025-10-13 15:25:55]  *** Listing of results directory ***
[2025-10-13 15:25:55] total 427212
[2025-10-13 15:25:55] -rwx------. 1 boincer umatlas     36292 Oct 12 18:57 runpilot2-wrapper.sh
[2025-10-13 15:25:55] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 18:57 queuedata.json
[2025-10-13 15:25:55] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 18:57 pilot3.tar.gz
[2025-10-13 15:25:55] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 15:25:55] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:02 run_atlas
[2025-10-13 15:25:55] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:02 job.xml
[2025-10-13 15:25:55] -rw-r--r--. 2 boincer umatlas 219657172 Oct 13 00:02 EVNT.46676267._004638.pool.root.1
[2025-10-13 15:25:55] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:02 start_atlas.sh
[2025-10-13 15:25:55] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:02 shared
[2025-10-13 15:25:55] -rw-r--r--. 2 boincer umatlas    569670 Oct 13 00:02 input.tar.gz
[2025-10-13 15:25:55] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:02 boinc_lockfile
[2025-10-13 15:25:55] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:03 pandaJob.out
[2025-10-13 15:25:55] -rw-------. 1 boincer umatlas    974373 Oct 13 00:04 agis_schedconf.cvmfs.json
[2025-10-13 15:25:55] drwx------. 5 boincer umatlas      4096 Oct 13 00:04 pilot3
[2025-10-13 15:25:55] -rw-r--r--. 1 boincer umatlas      6523 Oct 13 15:19 init_data.xml
[2025-10-13 15:25:55] -rw-------. 1 boincer umatlas 199999018 Oct 13 15:21 HITS.46676269._091663.pool.root.1
[2025-10-13 15:25:55] -rw-r--r--. 1 boincer umatlas       531 Oct 13 15:21 boinc_task_state.xml
[2025-10-13 15:25:55] -rw-------. 1 boincer umatlas      1047 Oct 13 15:24 memory_monitor_summary.json
[2025-10-13 15:25:55] -rw-------. 1 boincer umatlas   1560580 Oct 13 15:24 agis_ddmendpoints.agis.ALL.json
[2025-10-13 15:25:55] -rw-------. 1 boincer umatlas    924816 Oct 13 15:24 log.46676269._091663.job.log.tgz.1
[2025-10-13 15:25:55] -rw-------. 1 boincer umatlas      7831 Oct 13 15:25 heartbeat.json
[2025-10-13 15:25:55] -rw-r--r--. 1 boincer umatlas        28 Oct 13 15:25 wrapper_checkpoint.txt
[2025-10-13 15:25:55] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 15:25 boinc_mmap_file
[2025-10-13 15:25:55] -rw-------. 1 boincer umatlas        95 Oct 13 15:25 pilot_heartbeat.json
[2025-10-13 15:25:55] -rw-------. 1 boincer umatlas      4823 Oct 13 15:25 pilotlog.txt
[2025-10-13 15:25:55] -rw-------. 1 boincer umatlas   6032178 Oct 13 15:25 log.46676269._091663.job.log.1
[2025-10-13 15:25:55] -rw-------. 1 boincer umatlas       357 Oct 13 15:25 output.list
[2025-10-13 15:25:55] -rw-r--r--. 1 boincer umatlas       620 Oct 13 15:25 runtime_log
[2025-10-13 15:25:55] -rw-------. 1 boincer umatlas   6973440 Oct 13 15:25 result.tar.gz
[2025-10-13 15:25:55] -rw-------. 1 boincer umatlas       659 Oct 13 15:25 UC2LDmrBKS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmQEVMDmL7Poqn.diag
[2025-10-13 15:25:55] -rw-r--r--. 1 boincer umatlas      8704 Oct 13 15:25 runtime_log.err
[2025-10-13 15:25:55] -rw-r--r--. 1 boincer umatlas     21126 Oct 13 15:25 stderr.txt
[2025-10-13 15:25:56] HITS file was successfully produced:
[2025-10-13 15:25:56] -rw-------. 1 boincer umatlas 199999018 Oct 13 15:21 shared/HITS.pool.root.1
[2025-10-13 15:25:56]  *** Contents of shared directory: ***
[2025-10-13 15:25:56] total 417216
[2025-10-13 15:25:56] -rw-r--r--. 2 boincer umatlas 219657172 Oct 13 00:02 ATLAS.root_0
[2025-10-13 15:25:56] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:02 start_atlas.sh
[2025-10-13 15:25:56] -rw-r--r--. 2 boincer umatlas    569670 Oct 13 00:02 input.tar.gz
[2025-10-13 15:25:56] -rw-------. 1 boincer umatlas 199999018 Oct 13 15:21 HITS.pool.root.1
[2025-10-13 15:25:56] -rw-------. 1 boincer umatlas   6973440 Oct 13 15:25 result.tar.gz
15:25:58 (818985): run_atlas exited; CPU time 81858.356213
15:25:58 (818985): called boinc_finish(0)

</stderr_txt>
]]>

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