Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:30 (2997142): wrapper (7.7.26015): starting
00:01:30 (2997142): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 00:01:30] Arguments: --nthreads 12
[2025-10-13 00:01:30] Threads: 12
[2025-10-13 00:01:30] Checking for CVMFS
[2025-10-13 00:01:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:01:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:01:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:01:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:01:31] 2.13.2.0 5096 6613 90364 151647 3 29 38396001 40960001 21352 16776704 0 18021637 99.873 4247698 33469 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 00:01:31] CVMFS is ok
[2025-10-13 00:01:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:01:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:01:31] Further information can be found at the LHC@home message board.
[2025-10-13 00:01:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:01:31] Checking for apptainer binary...
[2025-10-13 00:01:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:01:31] Running /usr/bin/apptainer --version
[2025-10-13 00:01:31] apptainer version 1.4.3-1.el9
[2025-10-13 00:01:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:01:32] c-212-5.aglt2.org
[2025-10-13 00:01:32] apptainer works
[2025-10-13 00:01:32] Set ATHENA_PROC_NUMBER=12
[2025-10-13 00:01:32] Set ATHENA_CORE_NUMBER=12
[2025-10-13 00:01:32] Starting ATLAS job with PandaID=6840854789
[2025-10-13 00:01:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:16:27]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:16:27] 2025-10-13 09:16:03,400 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 05:16:27] 2025-10-13 09:16:04,470 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 05:16:27] 2025-10-13 09:16:04,476 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3040.684843750001
[2025-10-13 05:16:27] 2025-10-13 09:16:04,492 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6840854789/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 05:16:27] 2025-10-13 09:16:04,514 | INFO     | extracted standard info from prmon json
[2025-10-13 05:16:27] 2025-10-13 09:16:04,514 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 05:16:27] 2025-10-13 09:16:04,515 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 05:16:27] 2025-10-13 09:16:04,515 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 05:16:27] 2025-10-13 09:16:04,515 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 05:16:27] 2025-10-13 09:16:04,520 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:16:27] 2025-10-13 09:16:04,521 | INFO     | sum of square deviations: 9148566758.271807
[2025-10-13 05:16:27] 2025-10-13 09:16:04,522 | INFO     | sum of deviations: 143458807280.22336
[2025-10-13 05:16:27] 2025-10-13 09:16:04,522 | INFO     | mean x: 1760337545.0485437
[2025-10-13 05:16:27] 2025-10-13 09:16:04,522 | INFO     | mean y: 2617499.3851132686
[2025-10-13 05:16:27] 2025-10-13 09:16:04,522 | INFO     | -- intersect: -27601260932.71209
[2025-10-13 05:16:27] 2025-10-13 09:16:04,523 | INFO     | intersect: -27601260932.71209
[2025-10-13 05:16:27] 2025-10-13 09:16:04,523 | INFO     | chi2: 3.7351183126588428
[2025-10-13 05:16:27] 2025-10-13 09:16:04,523 | INFO     | sum of square deviations: 8711595697.355272
[2025-10-13 05:16:27] 2025-10-13 09:16:04,524 | INFO     | sum of deviations: 163206843678.81583
[2025-10-13 05:16:27] 2025-10-13 09:16:04,524 | INFO     | mean x: 1760337392.5460527
[2025-10-13 05:16:27] 2025-10-13 09:16:04,524 | INFO     | mean y: 2624287.513157895
[2025-10-13 05:16:27] 2025-10-13 09:16:04,524 | INFO     | -- intersect: -32976306281.36737
[2025-10-13 05:16:27] 2025-10-13 09:16:04,524 | INFO     | intersect: -32976306281.36737
[2025-10-13 05:16:27] 2025-10-13 09:16:04,525 | INFO     | chi2: 2.916099802586445
[2025-10-13 05:16:27] 2025-10-13 09:16:04,525 | INFO     | current chi2=2.916099802586445 (change=21.927511835344777 %)
[2025-10-13 05:16:27] 2025-10-13 09:16:04,525 | INFO     | right removable region: 303
[2025-10-13 05:16:27] 2025-10-13 09:16:04,525 | INFO     | sum of square deviations: 8711605153.259892
[2025-10-13 05:16:27] 2025-10-13 09:16:04,527 | INFO     | sum of deviations: 66460554965.000015
[2025-10-13 05:16:27] 2025-10-13 09:16:04,527 | INFO     | mean x: 1760337697.5493422
[2025-10-13 05:16:27] 2025-10-13 09:16:04,527 | INFO     | mean y: 2644280.0
[2025-10-13 05:16:27] 2025-10-13 09:16:04,527 | INFO     | -- intersect: -13426915284.136206
[2025-10-13 05:16:27] 2025-10-13 09:16:04,527 | INFO     | intersect: -13426915284.136206
[2025-10-13 05:16:27] 2025-10-13 09:16:04,528 | INFO     | chi2: 1.4896241166362092
[2025-10-13 05:16:27] 2025-10-13 09:16:04,528 | INFO     | current chi2=1.4896241166362092 (change=60.11842217721289 %)
[2025-10-13 05:16:27] 2025-10-13 09:16:04,528 | INFO     | sum of square deviations: 8288783348.247512
[2025-10-13 05:16:27] 2025-10-13 09:16:04,530 | INFO     | sum of deviations: 35960364479.193985
[2025-10-13 05:16:27] 2025-10-13 09:16:04,530 | INFO     | mean x: 1760337850.0501673
[2025-10-13 05:16:27] 2025-10-13 09:16:04,530 | INFO     | mean y: 2655275.1204013377
[2025-10-13 05:16:27] 2025-10-13 09:16:04,530 | INFO     | -- intersect: -7634459610.710063
[2025-10-13 05:16:27] 2025-10-13 09:16:04,530 | INFO     | intersect: -7634459610.710063
[2025-10-13 05:16:27] 2025-10-13 09:16:04,531 | INFO     | chi2: 1.213079145004385
[2025-10-13 05:16:27] 2025-10-13 09:16:04,531 | INFO     | current chi2=1.213079145004385 (change=18.56474855256127 %)
[2025-10-13 05:16:27] 2025-10-13 09:16:04,531 | INFO     | left removable region: 20
[2025-10-13 05:16:27] 2025-10-13 09:16:04,531 | INFO     | sum of square deviations: 7028057673.307386
[2025-10-13 05:16:27] 2025-10-13 09:16:04,533 | INFO     | sum of deviations: 10459533316.491163
[2025-10-13 05:16:27] 2025-10-13 09:16:04,533 | INFO     | mean x: 1760337972.04947
[2025-10-13 05:16:27] 2025-10-13 09:16:04,533 | INFO     | mean y: 2680970.6077738516
[2025-10-13 05:16:27] 2025-10-13 09:16:04,533 | INFO     | -- intersect: -2617148649.86703
[2025-10-13 05:16:27] 2025-10-13 09:16:04,533 | INFO     | intersect: -2617148649.86703
[2025-10-13 05:16:27] 2025-10-13 09:16:04,534 | INFO     | chi2: 0.008847358199894097
[2025-10-13 05:16:27] 2025-10-13 09:16:04,534 | INFO     | -- intersect: -2617148649.86703
[2025-10-13 05:16:27] 2025-10-13 09:16:04,534 | INFO     | current memory leak: 1.49 B/s (using 283 data points, chi2=0.01)
[2025-10-13 05:16:27] 2025-10-13 09:16:04,535 | INFO     | could have reported an average CPU frequency of 2945 MHz (14 samples)
[2025-10-13 05:16:27] 2025-10-13 09:16:04,535 | INFO     | ..............................
[2025-10-13 05:16:27] 2025-10-13 09:16:04,535 | INFO     | . Timing measurements:
[2025-10-13 05:16:27] 2025-10-13 09:16:04,535 | INFO     | . get job = 0 s
[2025-10-13 05:16:27] 2025-10-13 09:16:04,535 | INFO     | . initial setup = 2 s
[2025-10-13 05:16:27] 2025-10-13 09:16:04,535 | INFO     | . payload setup = 9 s
[2025-10-13 05:16:27] 2025-10-13 09:16:04,535 | INFO     | . stage-in = 0 s
[2025-10-13 05:16:27] 2025-10-13 09:16:04,535 | INFO     | . payload execution = 18803 s
[2025-10-13 05:16:27] 2025-10-13 09:16:04,535 | INFO     | . stage-out = 2 s
[2025-10-13 05:16:27] 2025-10-13 09:16:04,535 | INFO     | . log creation = 0 s
[2025-10-13 05:16:27] 2025-10-13 09:16:04,535 | INFO     | ..............................
[2025-10-13 05:16:27] 2025-10-13 09:16:05,056 | INFO     | 
[2025-10-13 05:16:27] 2025-10-13 09:16:05,057 | INFO     | job summary report
[2025-10-13 05:16:27] 2025-10-13 09:16:05,057 | INFO     | --------------------------------------------------
[2025-10-13 05:16:27] 2025-10-13 09:16:05,057 | INFO     | PanDA job id: 6840854789
[2025-10-13 05:16:27] 2025-10-13 09:16:05,057 | INFO     | task id: 46676269
[2025-10-13 05:16:27] 2025-10-13 09:16:05,057 | INFO     | errors: (none)
[2025-10-13 05:16:27] 2025-10-13 09:16:05,057 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:16:27] 2025-10-13 09:16:05,057 | INFO     | pilot state: finished 
[2025-10-13 05:16:27] 2025-10-13 09:16:05,057 | INFO     | transexitcode: 0
[2025-10-13 05:16:27] 2025-10-13 09:16:05,057 | INFO     | exeerrorcode: 0
[2025-10-13 05:16:27] 2025-10-13 09:16:05,057 | INFO     | exeerrordiag: 
[2025-10-13 05:16:27] 2025-10-13 09:16:05,057 | INFO     | exitcode: 0
[2025-10-13 05:16:27] 2025-10-13 09:16:05,058 | INFO     | exitmsg: OK
[2025-10-13 05:16:27] 2025-10-13 09:16:05,058 | INFO     | cpuconsumptiontime: 39112 s
[2025-10-13 05:16:27] 2025-10-13 09:16:05,058 | INFO     | nevents: 400
[2025-10-13 05:16:27] 2025-10-13 09:16:05,058 | INFO     | neventsw: 0
[2025-10-13 05:16:27] 2025-10-13 09:16:05,058 | INFO     | pid: 3039043
[2025-10-13 05:16:27] 2025-10-13 09:16:05,058 | INFO     | pgrp: 3039043
[2025-10-13 05:16:27] 2025-10-13 09:16:05,058 | INFO     | corecount: 12
[2025-10-13 05:16:27] 2025-10-13 09:16:05,058 | INFO     | event service: False
[2025-10-13 05:16:27] 2025-10-13 09:16:05,058 | INFO     | sizes: {0: 2348630, 1: 2348885, 8: 2349147, 12: 2349175, 18817: 2382389, 18818: 2382388, 18822: 2391570, 18825: 2391626, 18834: 2391820}
[2025-10-13 05:16:27] 2025-10-13 09:16:05,058 | INFO     | --------------------------------------------------
[2025-10-13 05:16:27] 2025-10-13 09:16:05,058 | INFO     | 
[2025-10-13 05:16:27] 2025-10-13 09:16:05,058 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-10-13 05:16:27] 2025-10-13 09:16:05,082 | INFO     | time since job start (18855s) is within the limit (172800.0s)
[2025-10-13 05:16:27] 2025-10-13 09:16:05,092 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:16:27] 2025-10-13 09:16:05,092 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:16:27] 2025-10-13 09:16:05,092 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:16:27] 2025-10-13 09:16:05,093 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:16:27] 2025-10-13 09:16:05,093 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:16:27] 2025-10-13 09:16:05,093 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:16:27] 2025-10-13 09:16:05,093 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:16:27] 2025-10-13 09:16:05,093 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:16:27] 2025-10-13 09:16:05,093 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:16:27] 2025-10-13 09:16:05,093 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:16:27] 2025-10-13 09:16:05,093 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:16:27] 2025-10-13 09:16:05,093 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:16:27] 2025-10-13 09:16:05,093 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:16:27] 2025-10-13 09:16:05,093 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:16:27] 2025-10-13 09:16:05,094 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:16:27] 2025-10-13 09:16:05,094 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:16:27] 2025-10-13 09:16:05,094 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:16:27] 2025-10-13 09:16:05,094 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:16:27] 2025-10-13 09:16:05,094 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:16:27] 2025-10-13 09:16:05,094 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:16:27] 2025-10-13 09:16:05,094 | INFO     | job 6840854789 has completed (purged errors)
[2025-10-13 05:16:27] 2025-10-13 09:16:05,094 | INFO     | overall cleanup function is called
[2025-10-13 05:16:27] 2025-10-13 09:16:06,105 | INFO     | --- collectZombieJob: --- 10, [3039043]
[2025-10-13 05:16:27] 2025-10-13 09:16:06,105 | INFO     | zombie collector waiting for pid 3039043
[2025-10-13 05:16:27] 2025-10-13 09:16:06,106 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:16:27] 2025-10-13 09:16:06,107 | INFO     | collected zombie processes
[2025-10-13 05:16:27] 2025-10-13 09:16:06,107 | INFO     | will attempt to kill all subprocesses of pid=3039043
[2025-10-13 05:16:27] 2025-10-13 09:16:06,943 | INFO     | PID=3005285 has CPU usage=14.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 05:16:27] 2025-10-13 09:16:06,943 | INFO     | .. there are 17 such processes running
[2025-10-13 05:16:27] 2025-10-13 09:16:06,976 | INFO     | process IDs to be killed: [3039043] (in reverse order)
[2025-10-13 05:16:27] 2025-10-13 09:16:07,197 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:16:27] 2025-10-13 09:16:07,197 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:16:27] 2025-10-13 09:16:07,214 | INFO     | did not find any defunct processes belonging to 3039043
[2025-10-13 05:16:27] 2025-10-13 09:16:07,229 | INFO     | did not find any defunct processes belonging to 3039043
[2025-10-13 05:16:27] 2025-10-13 09:16:07,229 | INFO     | ready for new job
[2025-10-13 05:16:27] 2025-10-13 09:16:07,230 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:16:27] 2025-10-13 09:16:07,232 | INFO     | ***************************************
[2025-10-13 05:16:27] 2025-10-13 09:16:07,233 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:16:27] 2025-10-13 09:16:07,233 | INFO     | ***************************************
[2025-10-13 05:16:27] 2025-10-13 09:16:07,233 | INFO     | 
[2025-10-13 05:16:27] 2025-10-13 09:16:07,237 | INFO     | architecture information:
[2025-10-13 05:16:27] 2025-10-13 09:16:07,237 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:16:27] 2025-10-13 09:16:07,255 | INFO     | cat /etc/os-release:
[2025-10-13 05:16:27] NAME="CentOS Linux"
[2025-10-13 05:16:27] VERSION="7 (Core)"
[2025-10-13 05:16:27] ID="centos"
[2025-10-13 05:16:27] ID_LIKE="rhel fedora"
[2025-10-13 05:16:27] VERSION_ID="7"
[2025-10-13 05:16:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:16:27] ANSI_COLOR="0;31"
[2025-10-13 05:16:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:16:27] HOME_URL="https://www.centos.org/"
[2025-10-13 05:16:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:16:27] 
[2025-10-13 05:16:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:16:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:16:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:16:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:16:27] 
[2025-10-13 05:16:27] 2025-10-13 09:16:07,255 | INFO     | ***************************************
[2025-10-13 05:16:27] 2025-10-13 09:16:07,760 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-10-13 05:16:27] 2025-10-13 09:16:07,779 | INFO     | sufficient remaining disk space (127092654080 B)
[2025-10-13 05:16:27] 2025-10-13 09:16:07,779 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:16:27] 2025-10-13 09:16:07,779 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:16:27] 2025-10-13 09:16:07,779 | INFO     | update_server=False
[2025-10-13 05:16:27] 2025-10-13 09:16:07,780 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:16:27] 2025-10-13 09:16:07,780 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 05:16:27] 2025-10-13 09:16:07,780 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:16:27] 2025-10-13 09:16:07,780 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:16:27] 2025-10-13 09:16:07,781 | INFO     | aborting loop
[2025-10-13 05:16:27] 2025-10-13 09:16:07,781 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:16:27] 2025-10-13 09:16:07,782 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:16:27] 2025-10-13 09:16:08,069 | INFO     | all data control threads have been joined
[2025-10-13 05:16:27] 2025-10-13 09:16:08,276 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:16:27] 2025-10-13 09:16:08,785 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:16:27] 2025-10-13 09:16:08,787 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:16:27] 2025-10-13 09:16:08,971 | INFO     | all job control threads have been joined
[2025-10-13 05:16:27] 2025-10-13 09:16:09,075 | INFO     | [data] control thread has finished
[2025-10-13 05:16:27] 2025-10-13 09:16:09,082 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:16:27] 2025-10-13 09:16:09,085 | INFO     | [job] validate thread has finished
[2025-10-13 05:16:27] 2025-10-13 09:16:09,180 | INFO     | all payload control threads have been joined
[2025-10-13 05:16:27] 2025-10-13 09:16:09,534 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:16:27] 2025-10-13 09:16:09,598 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:16:27] 2025-10-13 09:16:09,603 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:16:27] 2025-10-13 09:16:09,614 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:16:27] 2025-10-13 09:16:09,637 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:16:27] 2025-10-13 09:16:09,978 | INFO     | [job] control thread has finished
[2025-10-13 05:16:27] 2025-10-13 09:16:10,131 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:16:27] 2025-10-13 09:16:10,158 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:16:27] 2025-10-13 09:16:10,186 | INFO     | [payload] control thread has finished
[2025-10-13 05:16:27] 2025-10-13 09:16:10,282 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:16:27] 2025-10-13 09:16:10,642 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:16:27] 2025-10-13 09:16:11,164 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:16:27] 2025-10-13 09:16:15,182 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:16:27] 2025-10-13 09:16:21,924 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:16:27] 2025-10-13 09:16:22,305 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140109769643840)>', '<ExcThread(monitor, started 140109148059392)>']
[2025-10-13 05:16:27] 2025-10-13 09:16:22,864 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:16:27] 2025-10-13 09:16:22,864 | INFO     | [monitor] control thread has ended
[2025-10-13 05:16:27] 2025-10-13 09:16:27,332 | INFO     | all workflow threads have been joined
[2025-10-13 05:16:27] 2025-10-13 09:16:27,332 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:16:27] 2025-10-13 09:16:27,333 | INFO     | traces error code: 0
[2025-10-13 05:16:27] 2025-10-13 09:16:27,333 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:16:27] 2025-10-13 09:16:27,582 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:16:27] 2025-10-13 09:16:27,586 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:16:27] 2025-10-13 09:16:27,594 [wrapper] pilotpid: 3005285
[2025-10-13 05:16:27] 2025-10-13 09:16:27,597 [wrapper] Pilot exit status: 0
[2025-10-13 05:16:27] 2025-10-13 09:16:27,615 [wrapper] pandaids: 6840854789
[2025-10-13 05:16:27] 2025-10-13 09:16:27,716 [wrapper] cleanup supervisor_pilot 3623919 3005286
[2025-10-13 05:16:27] 2025-10-13 09:16:27,722 [wrapper] Test setup, not cleaning
[2025-10-13 05:16:27] 2025-10-13 09:16:27,726 [wrapper] apfmon messages muted
[2025-10-13 05:16:27] 2025-10-13 09:16:27,730 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:16:27] 2025-10-13 09:16:27,735 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:16:27]  *** Error codes and diagnostics ***
[2025-10-13 05:16:27]     "exeErrorCode": 0,
[2025-10-13 05:16:27]     "exeErrorDiag": "",
[2025-10-13 05:16:27]     "pilotErrorCode": 0,
[2025-10-13 05:16:27]     "pilotErrorDiag": "",
[2025-10-13 05:16:27]  *** Listing of results directory ***
[2025-10-13 05:16:27] total 419160
[2025-10-13 05:16:27] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 18:49 pilot3.tar.gz
[2025-10-13 05:16:27] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 18:55 queuedata.json
[2025-10-13 05:16:27] -rwx------. 1 boincer umatlas     36292 Oct 12 18:57 runpilot2-wrapper.sh
[2025-10-13 05:16:27] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:16:27] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:01 run_atlas
[2025-10-13 05:16:27] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:01 job.xml
[2025-10-13 05:16:27] -rw-r--r--. 2 boincer umatlas 222935576 Oct 13 00:01 EVNT.46676267._004640.pool.root.1
[2025-10-13 05:16:27] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:01 shared
[2025-10-13 05:16:27] -rw-r--r--. 2 boincer umatlas    569683 Oct 13 00:01 input.tar.gz
[2025-10-13 05:16:27] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:01 start_atlas.sh
[2025-10-13 05:16:27] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:01 boinc_lockfile
[2025-10-13 05:16:27] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:01 pandaJob.out
[2025-10-13 05:16:27] -rw-------. 1 boincer umatlas    974373 Oct 13 00:01 agis_schedconf.cvmfs.json
[2025-10-13 05:16:27] drwx------. 5 boincer umatlas      4096 Oct 13 00:01 pilot3
[2025-10-13 05:16:27] -rw-r--r--. 1 boincer umatlas      6945 Oct 13 05:12 init_data.xml
[2025-10-13 05:16:27] -rw-------. 1 boincer umatlas 196080458 Oct 13 05:15 HITS.46676269._091732.pool.root.1
[2025-10-13 05:16:27] -rw-r--r--. 1 boincer umatlas       529 Oct 13 05:15 boinc_task_state.xml
[2025-10-13 05:16:27] -rw-------. 1 boincer umatlas      1050 Oct 13 05:15 memory_monitor_summary.json
[2025-10-13 05:16:27] -rw-------. 1 boincer umatlas   1560580 Oct 13 05:15 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:16:27] -rw-------. 1 boincer umatlas    600454 Oct 13 05:15 log.46676269._091732.job.log.tgz.1
[2025-10-13 05:16:27] -rw-------. 1 boincer umatlas        95 Oct 13 05:16 pilot_heartbeat.json
[2025-10-13 05:16:27] -rw-------. 1 boincer umatlas      7805 Oct 13 05:16 heartbeat.json
[2025-10-13 05:16:27] -rw-------. 1 boincer umatlas      4553 Oct 13 05:16 pilotlog.txt
[2025-10-13 05:16:27] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 05:16 boinc_mmap_file
[2025-10-13 05:16:27] -rw-r--r--. 1 boincer umatlas        27 Oct 13 05:16 wrapper_checkpoint.txt
[2025-10-13 05:16:27] -rw-------. 1 boincer umatlas   2550644 Oct 13 05:16 log.46676269._091732.job.log.1
[2025-10-13 05:16:27] -rw-------. 1 boincer umatlas       357 Oct 13 05:16 output.list
[2025-10-13 05:16:27] -rw-r--r--. 1 boincer umatlas       620 Oct 13 05:16 runtime_log
[2025-10-13 05:16:27] -rw-------. 1 boincer umatlas   3174400 Oct 13 05:16 result.tar.gz
[2025-10-13 05:16:27] -rw-r--r--. 1 boincer umatlas      8701 Oct 13 05:16 runtime_log.err
[2025-10-13 05:16:27] -rw-------. 1 boincer umatlas       659 Oct 13 05:16 Mn6NDmTBKS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoxlNDmGBkuxn.diag
[2025-10-13 05:16:27] -rw-r--r--. 1 boincer umatlas     21239 Oct 13 05:16 stderr.txt
[2025-10-13 05:16:27] HITS file was successfully produced:
[2025-10-13 05:16:27] -rw-------. 1 boincer umatlas 196080458 Oct 13 05:15 shared/HITS.pool.root.1
[2025-10-13 05:16:27]  *** Contents of shared directory: ***
[2025-10-13 05:16:27] total 412880
[2025-10-13 05:16:27] -rw-r--r--. 2 boincer umatlas 222935576 Oct 13 00:01 ATLAS.root_0
[2025-10-13 05:16:27] -rw-r--r--. 2 boincer umatlas    569683 Oct 13 00:01 input.tar.gz
[2025-10-13 05:16:27] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:01 start_atlas.sh
[2025-10-13 05:16:27] -rw-------. 1 boincer umatlas 196080458 Oct 13 05:15 HITS.pool.root.1
[2025-10-13 05:16:27] -rw-------. 1 boincer umatlas   3174400 Oct 13 05:16 result.tar.gz
05:16:29 (2997142): run_atlas exited; CPU time 39668.739960
05:16:29 (2997142): called boinc_finish(0)

</stderr_txt>
]]>

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