Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:26:04 (2568142): wrapper (7.7.26015): starting
15:26:04 (2568142): wrapper: running run_atlas (--nthreads 2)
[2025-10-13 15:26:04] Arguments: --nthreads 2
[2025-10-13 15:26:04] Threads: 2
[2025-10-13 15:26:04] Checking for CVMFS
[2025-10-13 15:26:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 15:26:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 15:26:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 15:26:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 15:26:04] 2.9.2.0 1210534 5812 59452 151662 0 56 28308312 36864001 0 130560 0 3561332 99.989 196639 766 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 15:26:04] CVMFS is ok
[2025-10-13 15:26:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 15:26:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 15:26:04] Further information can be found at the LHC@home message board.
[2025-10-13 15:26:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 15:26:04] Checking for apptainer binary...
[2025-10-13 15:26:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 15:26:04] Running /usr/bin/apptainer --version
[2025-10-13 15:26:04] apptainer version 1.4.1-1.1
[2025-10-13 15:26:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 15:26:04] thA369
[2025-10-13 15:26:04] apptainer works
[2025-10-13 15:26:04] Set ATHENA_PROC_NUMBER=2
[2025-10-13 15:26:04] Set ATHENA_CORE_NUMBER=2
[2025-10-13 15:26:04] Starting ATLAS job with PandaID=6840854718
[2025-10-13 15:26:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 17:29:56]  *** The last 200 lines of the pilot log: ***
[2025-10-13 17:29:56] 2025-10-13 15:29:25,815 | INFO     | cat /etc/os-release:
[2025-10-13 17:29:56] NAME="CentOS Linux"
[2025-10-13 17:29:56] VERSION="7 (Core)"
[2025-10-13 17:29:56] ID="centos"
[2025-10-13 17:29:56] ID_LIKE="rhel fedora"
[2025-10-13 17:29:56] VERSION_ID="7"
[2025-10-13 17:29:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 17:29:56] ANSI_COLOR="0;31"
[2025-10-13 17:29:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 17:29:56] HOME_URL="https://www.centos.org/"
[2025-10-13 17:29:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 17:29:56] 
[2025-10-13 17:29:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 17:29:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 17:29:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 17:29:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 17:29:56] 
[2025-10-13 17:29:56] 2025-10-13 15:29:25,815 | INFO     | ***************************************
[2025-10-13 17:29:56] 2025-10-13 15:29:26,317 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 17:29:56] 2025-10-13 15:29:26,327 | INFO     | sufficient remaining disk space (332659687424 B)
[2025-10-13 17:29:56] 2025-10-13 15:29:26,327 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 17:29:56] 2025-10-13 15:29:26,328 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 17:29:56] 2025-10-13 15:29:26,328 | INFO     | update_server=False
[2025-10-13 17:29:56] 2025-10-13 15:29:26,328 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 17:29:56] 2025-10-13 15:29:26,328 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 17:29:56] 2025-10-13 15:29:26,402 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 17:29:56] 2025-10-13 15:29:26,403 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 17:29:56] 2025-10-13 15:29:26,403 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 17:29:56] 2025-10-13 15:29:26,403 | INFO     | will abort loop
[2025-10-13 17:29:56] 2025-10-13 15:29:26,523 | INFO     | all data control threads have been joined
[2025-10-13 17:29:56] 2025-10-13 15:29:26,559 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 17:29:56] 2025-10-13 15:29:27,073 | INFO     | all payload control threads have been joined
[2025-10-13 17:29:56] 2025-10-13 15:29:27,333 | INFO     | [job] queue monitor thread has finished
[2025-10-13 17:29:56] 2025-10-13 15:29:27,334 | INFO     | [job] retrieve thread has finished
[2025-10-13 17:29:56] 2025-10-13 15:29:27,334 | INFO     | [monitor] cgroup control has ended
[2025-10-13 17:29:56] 2025-10-13 15:29:27,335 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 17:29:56] 2025-10-13 15:29:27,409 | INFO     | [job] job monitor thread has finished
[2025-10-13 17:29:56] 2025-10-13 15:29:27,410 | INFO     | [payload] failed_post thread has finished
[2025-10-13 17:29:56] 2025-10-13 15:29:27,529 | INFO     | [data] control thread has finished
[2025-10-13 17:29:56] 2025-10-13 15:29:27,577 | INFO     | all job control threads have been joined
[2025-10-13 17:29:56] 2025-10-13 15:29:27,716 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 17:29:56] 2025-10-13 15:29:27,927 | INFO     | [payload] validate_post thread has finished
[2025-10-13 17:29:56] 2025-10-13 15:29:28,079 | INFO     | [payload] control thread has finished
[2025-10-13 17:29:56] 2025-10-13 15:29:28,428 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 17:29:56] 2025-10-13 15:29:28,434 | INFO     | [job] validate thread has finished
[2025-10-13 17:29:56] 2025-10-13 15:29:28,558 | INFO     | [data] copytool_in thread has finished
[2025-10-13 17:29:56] 2025-10-13 15:29:28,583 | INFO     | [job] control thread has finished
[2025-10-13 17:29:56] 2025-10-13 15:29:28,646 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 17:29:56] 2025-10-13 15:29:29,721 | INFO     | [data] copytool_out thread has finished
[2025-10-13 17:29:56] 2025-10-13 15:29:30,567 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 17:29:56] 2025-10-13 15:29:36,920 | INFO     | job.realtimelogging is not enabled
[2025-10-13 17:29:56] 2025-10-13 15:29:37,926 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 17:29:56] 2025-10-13 15:29:39,778 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140492460771136)>', '<ExcThread(monitor, started 140491517581056)>']
[2025-10-13 17:29:56] 2025-10-13 15:29:44,804 | INFO     | all workflow threads have been joined
[2025-10-13 17:29:56] 2025-10-13 15:29:44,804 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 17:29:56] 2025-10-13 15:29:44,805 | INFO     | traces error code: 0
[2025-10-13 17:29:56] 2025-10-13 15:29:44,805 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 17:29:56] 2025-10-13 15:29:56,140 | INFO     | PID=2571849 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 17:29:56] 2025-10-13 15:29:56,140 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 17:29:56] 2025-10-13 15:29:56,140 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 17:29:56] 2025-10-13 15:29:56,140 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 17:29:56] 2025-10-13 15:29:56,141 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 17:29:56] 2025-10-13 15:29:56,141 | INFO     | [monitor] control thread has ended
[2025-10-13 17:29:56] 2025-10-13 15:29:56,178 [wrapper] ==== pilot stdout END ====
[2025-10-13 17:29:56] 2025-10-13 15:29:56,181 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 17:29:56] 2025-10-13 15:29:56,182 [wrapper] pilotpid: 2571849
[2025-10-13 17:29:56] 2025-10-13 15:29:56,184 [wrapper] Pilot exit status: 0
[2025-10-13 17:29:56] 2025-10-13 15:29:56,190 [wrapper] pandaids: 6840854718
[2025-10-13 17:29:56] 2025-10-13 15:29:56,201 [wrapper] cleanup supervisor_pilot 2593431 2571850
[2025-10-13 17:29:56] 2025-10-13 15:29:56,203 [wrapper] Test setup, not cleaning
[2025-10-13 17:29:56] 2025-10-13 15:29:56,205 [wrapper] apfmon messages muted
[2025-10-13 17:29:56] 2025-10-13 15:29:56,207 [wrapper] ==== wrapper stdout END ====
[2025-10-13 17:29:56] 2025-10-13 15:29:56,209 [wrapper] ==== wrapper stderr END ====
[2025-10-13 17:29:56]  *** Error codes and diagnostics ***
[2025-10-13 17:29:56]     "exeErrorCode": 0,
[2025-10-13 17:29:56]     "exeErrorDiag": "",
[2025-10-13 17:29:56]     "pilotErrorCode": 0,
[2025-10-13 17:29:56]     "pilotErrorDiag": "",
[2025-10-13 17:29:56]  *** Listing of results directory ***
[2025-10-13 17:29:56] total 405120
[2025-10-13 17:29:56] -rw-r--r-- 1 boinc boinc    557409 Oct 13 00:49 pilot3.tar.gz
[2025-10-13 17:29:56] -rw-r--r-- 1 boinc boinc      5112 Oct 13 00:55 queuedata.json
[2025-10-13 17:29:56] -rwx------ 1 boinc boinc     36292 Oct 13 00:57 runpilot2-wrapper.sh
[2025-10-13 17:29:56] -rw-r--r-- 1 boinc boinc       100 Oct 13 15:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 17:29:56] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 15:26 run_atlas
[2025-10-13 17:29:56] -rw-r--r-- 1 boinc boinc       105 Oct 13 15:26 job.xml
[2025-10-13 17:29:56] -rw-r--r-- 2 boinc boinc 218515107 Oct 13 15:26 EVNT.46676267._004639.pool.root.1
[2025-10-13 17:29:56] -rw-r--r-- 2 boinc boinc    569680 Oct 13 15:26 input.tar.gz
[2025-10-13 17:29:56] -rw-r--r-- 2 boinc boinc     15120 Oct 13 15:26 start_atlas.sh
[2025-10-13 17:29:56] drwxrwx--x 2 boinc boinc      4096 Oct 13 15:26 shared
[2025-10-13 17:29:56] -rw-r--r-- 1 boinc boinc         0 Oct 13 15:26 boinc_setup_complete
[2025-10-13 17:29:56] -rw-r--r-- 1 boinc boinc      6206 Oct 13 15:26 init_data.xml
[2025-10-13 17:29:56] -rw-r--r-- 1 boinc boinc         0 Oct 13 15:26 boinc_lockfile
[2025-10-13 17:29:56] -rw-r--r-- 1 boinc boinc      2550 Oct 13 15:26 pandaJob.out
[2025-10-13 17:29:56] -rw------- 1 boinc boinc    972489 Oct 13 15:26 agis_schedconf.cvmfs.json
[2025-10-13 17:29:56] -rw------- 1 boinc boinc   1560580 Oct 13 15:26 agis_ddmendpoints.agis.ALL.json
[2025-10-13 17:29:56] drwx------ 5 boinc boinc      4096 Oct 13 15:26 pilot3
[2025-10-13 17:29:56] -rw------- 1 boinc boinc 189774387 Oct 13 17:28 HITS.46676269._091693.pool.root.1
[2025-10-13 17:29:56] -rw-r--r-- 1 boinc boinc       529 Oct 13 17:28 boinc_task_state.xml
[2025-10-13 17:29:56] -rw------- 1 boinc boinc      1014 Oct 13 17:29 memory_monitor_summary.json
[2025-10-13 17:29:56] -rw------- 1 boinc boinc    269377 Oct 13 17:29 log.46676269._091693.job.log.tgz.1
[2025-10-13 17:29:56] -rw------- 1 boinc boinc      7755 Oct 13 17:29 heartbeat.json
[2025-10-13 17:29:56] -rw-r--r-- 1 boinc boinc        27 Oct 13 17:29 wrapper_checkpoint.txt
[2025-10-13 17:29:56] -rw-r--r-- 1 boinc boinc      8192 Oct 13 17:29 boinc_mmap_file
[2025-10-13 17:29:56] -rw------- 1 boinc boinc       747 Oct 13 17:29 pilotlog.txt
[2025-10-13 17:29:56] -rw------- 1 boinc boinc        95 Oct 13 17:29 pilot_heartbeat.json
[2025-10-13 17:29:56] -rw------- 1 boinc boinc   1066217 Oct 13 17:29 log.46676269._091693.job.log.1
[2025-10-13 17:29:56] -rw------- 1 boinc boinc       357 Oct 13 17:29 output.list
[2025-10-13 17:29:56] -rw-r--r-- 1 boinc boinc       620 Oct 13 17:29 runtime_log
[2025-10-13 17:29:56] -rw------- 1 boinc boinc   1351680 Oct 13 17:29 result.tar.gz
[2025-10-13 17:29:56] -rw-r--r-- 1 boinc boinc      8777 Oct 13 17:29 runtime_log.err
[2025-10-13 17:29:56] -rw------- 1 boinc boinc       659 Oct 13 17:29 OY4NDmTBKS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmxlNDmq7NHHm.diag
[2025-10-13 17:29:56] -rw-r--r-- 1 boinc boinc      9110 Oct 13 17:29 stderr.txt
[2025-10-13 17:29:56] HITS file was successfully produced:
[2025-10-13 17:29:56] -rw------- 1 boinc boinc 189774387 Oct 13 17:28 shared/HITS.pool.root.1
[2025-10-13 17:29:56]  *** Contents of shared directory: ***
[2025-10-13 17:29:56] total 400628
[2025-10-13 17:29:56] -rw-r--r-- 2 boinc boinc 218515107 Oct 13 15:26 ATLAS.root_0
[2025-10-13 17:29:56] -rw-r--r-- 2 boinc boinc    569680 Oct 13 15:26 input.tar.gz
[2025-10-13 17:29:56] -rw-r--r-- 2 boinc boinc     15120 Oct 13 15:26 start_atlas.sh
[2025-10-13 17:29:56] -rw------- 1 boinc boinc 189774387 Oct 13 17:28 HITS.pool.root.1
[2025-10-13 17:29:56] -rw------- 1 boinc boinc   1351680 Oct 13 17:29 result.tar.gz
17:30:17 (2568142): run_atlas exited; CPU time 14367.318416
17:30:17 (2568142): called boinc_finish(0)

</stderr_txt>
]]>

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