Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:17 (2413964): wrapper (7.7.26015): starting
00:04:17 (2413964): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 00:04:17] Arguments: --nthreads 12
[2025-10-13 00:04:17] Threads: 12
[2025-10-13 00:04:17] Checking for CVMFS
[2025-10-13 00:04:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:04:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:04:18] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:04:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:04:18] 2.13.1.0 5004 6616 117364 151647 0 779 26945703 40960001 26740 16776704 0 24287341 99.824 10751844 31786 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 00:04:18] CVMFS is ok
[2025-10-13 00:04:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:04:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:04:18] Further information can be found at the LHC@home message board.
[2025-10-13 00:04:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:04:18] Checking for apptainer binary...
[2025-10-13 00:04:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:04:18] Running /usr/bin/apptainer --version
[2025-10-13 00:04:18] apptainer version 1.4.3-1.el9
[2025-10-13 00:04:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:04:18] c-212-12.aglt2.org
[2025-10-13 00:04:18] apptainer works
[2025-10-13 00:04:18] Set ATHENA_PROC_NUMBER=12
[2025-10-13 00:04:18] Set ATHENA_CORE_NUMBER=12
[2025-10-13 00:04:18] Starting ATLAS job with PandaID=6840749042
[2025-10-13 00:04:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 04:56:26]  *** The last 200 lines of the pilot log: ***
[2025-10-13 04:56:26] 2025-10-13 08:55:37,669 | INFO     | chi2: 4.976610278128417
[2025-10-13 04:56:26] 2025-10-13 08:55:37,669 | INFO     | current chi2=4.976610278128417 (change=12.639256981332611 %)
[2025-10-13 04:56:26] 2025-10-13 08:55:37,669 | INFO     | right removable region: 279
[2025-10-13 04:56:26] 2025-10-13 08:55:37,670 | INFO     | sum of square deviations: 6806589755.699978
[2025-10-13 04:56:26] 2025-10-13 08:55:37,672 | INFO     | sum of deviations: 139976492915.6502
[2025-10-13 04:56:26] 2025-10-13 08:55:37,672 | INFO     | mean x: 1760337183.65
[2025-10-13 04:56:26] 2025-10-13 08:55:37,672 | INFO     | mean y: 2594575.6392857144
[2025-10-13 04:56:26] 2025-10-13 08:55:37,672 | INFO     | -- intersect: -36198474411.953896
[2025-10-13 04:56:26] 2025-10-13 08:55:37,672 | INFO     | intersect: -36198474411.953896
[2025-10-13 04:56:26] 2025-10-13 08:55:37,672 | INFO     | chi2: 2.7818001949540307
[2025-10-13 04:56:26] 2025-10-13 08:55:37,672 | INFO     | current chi2=2.7818001949540307 (change=51.167538067286245 %)
[2025-10-13 04:56:26] 2025-10-13 08:55:37,673 | INFO     | sum of square deviations: 6448393485.585419
[2025-10-13 04:56:26] 2025-10-13 08:55:37,675 | INFO     | sum of deviations: 93864983403.02913
[2025-10-13 04:56:26] 2025-10-13 08:55:37,675 | INFO     | mean x: 1760337336.1527274
[2025-10-13 04:56:26] 2025-10-13 08:55:37,675 | INFO     | mean y: 2614171.0945454547
[2025-10-13 04:56:26] 2025-10-13 08:55:37,675 | INFO     | -- intersect: -25621447885.767895
[2025-10-13 04:56:26] 2025-10-13 08:55:37,675 | INFO     | intersect: -25621447885.767895
[2025-10-13 04:56:26] 2025-10-13 08:55:37,675 | INFO     | chi2: 1.9670760556285034
[2025-10-13 04:56:26] 2025-10-13 08:55:37,676 | INFO     | current chi2=1.9670760556285034 (change=29.28765843080224 %)
[2025-10-13 04:56:26] 2025-10-13 08:55:37,676 | INFO     | sum of square deviations: 6102988152.966639
[2025-10-13 04:56:26] 2025-10-13 08:55:37,678 | INFO     | sum of deviations: 54948130310.73328
[2025-10-13 04:56:26] 2025-10-13 08:55:37,678 | INFO     | mean x: 1760337488.6555555
[2025-10-13 04:56:26] 2025-10-13 08:55:37,678 | INFO     | mean y: 2631358.9111111113
[2025-10-13 04:56:26] 2025-10-13 08:55:37,678 | INFO     | -- intersect: -15846531590.96217
[2025-10-13 04:56:26] 2025-10-13 08:55:37,678 | INFO     | intersect: -15846531590.96217
[2025-10-13 04:56:26] 2025-10-13 08:55:37,678 | INFO     | chi2: 1.3965256548848617
[2025-10-13 04:56:26] 2025-10-13 08:55:37,679 | INFO     | current chi2=1.3965256548848617 (change=29.004999532737656 %)
[2025-10-13 04:56:26] 2025-10-13 08:55:37,679 | INFO     | sum of square deviations: 5770141195.343387
[2025-10-13 04:56:26] 2025-10-13 08:55:37,680 | INFO     | sum of deviations: 22707297891.328312
[2025-10-13 04:56:26] 2025-10-13 08:55:37,681 | INFO     | mean x: 1760337641.1584907
[2025-10-13 04:56:26] 2025-10-13 08:55:37,681 | INFO     | mean y: 2646122.920754717
[2025-10-13 04:56:26] 2025-10-13 08:55:37,681 | INFO     | -- intersect: -6924829280.863581
[2025-10-13 04:56:26] 2025-10-13 08:55:37,681 | INFO     | intersect: -6924829280.863581
[2025-10-13 04:56:26] 2025-10-13 08:55:37,681 | INFO     | chi2: 0.9871839287978124
[2025-10-13 04:56:26] 2025-10-13 08:55:37,681 | INFO     | current chi2=0.9871839287978124 (change=29.31143618129937 %)
[2025-10-13 04:56:26] 2025-10-13 08:55:37,682 | INFO     | sum of square deviations: 5449620050.215387
[2025-10-13 04:56:26] 2025-10-13 08:55:37,683 | INFO     | sum of deviations: 1743711773.9384575
[2025-10-13 04:56:26] 2025-10-13 08:55:37,683 | INFO     | mean x: 1760337793.6615384
[2025-10-13 04:56:26] 2025-10-13 08:55:37,683 | INFO     | mean y: 2656088.703846154
[2025-10-13 04:56:26] 2025-10-13 08:55:37,683 | INFO     | -- intersect: -560598176.4802293
[2025-10-13 04:56:26] 2025-10-13 08:55:37,684 | INFO     | intersect: -560598176.4802293
[2025-10-13 04:56:26] 2025-10-13 08:55:37,684 | INFO     | chi2: 0.8049457501070882
[2025-10-13 04:56:26] 2025-10-13 08:55:37,684 | INFO     | current chi2=0.8049457501070882 (change=18.460407769467324 %)
[2025-10-13 04:56:26] 2025-10-13 08:55:37,684 | INFO     | left removable region: 50
[2025-10-13 04:56:26] 2025-10-13 08:55:37,684 | INFO     | sum of square deviations: 3723478460.2445583
[2025-10-13 04:56:26] 2025-10-13 08:55:37,686 | INFO     | sum of deviations: 3740889828.9475985
[2025-10-13 04:56:26] 2025-10-13 08:55:37,686 | INFO     | mean x: 1760338373.1441047
[2025-10-13 04:56:26] 2025-10-13 08:55:37,686 | INFO     | mean y: 2672024.1834061136
[2025-10-13 04:56:26] 2025-10-13 08:55:37,686 | INFO     | -- intersect: -1765897872.463297
[2025-10-13 04:56:26] 2025-10-13 08:55:37,686 | INFO     | intersect: -1765897872.463297
[2025-10-13 04:56:26] 2025-10-13 08:55:37,686 | INFO     | chi2: 0.002791982353439114
[2025-10-13 04:56:26] 2025-10-13 08:55:37,686 | INFO     | -- intersect: -1765897872.463297
[2025-10-13 04:56:26] 2025-10-13 08:55:37,687 | INFO     | current memory leak: 1.00 B/s (using 229 data points, chi2=0.00)
[2025-10-13 04:56:26] 2025-10-13 08:55:37,687 | INFO     | could have reported an average CPU frequency of 2946 MHz (13 samples)
[2025-10-13 04:56:26] 2025-10-13 08:55:37,687 | INFO     | ..............................
[2025-10-13 04:56:26] 2025-10-13 08:55:37,687 | INFO     | . Timing measurements:
[2025-10-13 04:56:26] 2025-10-13 08:55:37,687 | INFO     | . get job = 1 s
[2025-10-13 04:56:26] 2025-10-13 08:55:37,687 | INFO     | . initial setup = 3 s
[2025-10-13 04:56:26] 2025-10-13 08:55:37,687 | INFO     | . payload setup = 25 s
[2025-10-13 04:56:26] 2025-10-13 08:55:37,688 | INFO     | . stage-in = 0 s
[2025-10-13 04:56:26] 2025-10-13 08:55:37,688 | INFO     | . payload execution = 17364 s
[2025-10-13 04:56:26] 2025-10-13 08:55:37,688 | INFO     | . stage-out = 3 s
[2025-10-13 04:56:26] 2025-10-13 08:55:37,688 | INFO     | . log creation = 0 s
[2025-10-13 04:56:26] 2025-10-13 08:55:37,688 | INFO     | ..............................
[2025-10-13 04:56:26] 2025-10-13 08:55:38,084 | INFO     | 
[2025-10-13 04:56:26] 2025-10-13 08:55:38,085 | INFO     | job summary report
[2025-10-13 04:56:26] 2025-10-13 08:55:38,086 | INFO     | --------------------------------------------------
[2025-10-13 04:56:26] 2025-10-13 08:55:38,086 | INFO     | PanDA job id: 6840749042
[2025-10-13 04:56:26] 2025-10-13 08:55:38,086 | INFO     | task id: 46676269
[2025-10-13 04:56:26] 2025-10-13 08:55:38,086 | INFO     | errors: (none)
[2025-10-13 04:56:26] 2025-10-13 08:55:38,086 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 04:56:26] 2025-10-13 08:55:38,086 | INFO     | pilot state: finished 
[2025-10-13 04:56:26] 2025-10-13 08:55:38,086 | INFO     | transexitcode: 0
[2025-10-13 04:56:26] 2025-10-13 08:55:38,086 | INFO     | exeerrorcode: 0
[2025-10-13 04:56:26] 2025-10-13 08:55:38,086 | INFO     | exeerrordiag: 
[2025-10-13 04:56:26] 2025-10-13 08:55:38,086 | INFO     | exitcode: 0
[2025-10-13 04:56:26] 2025-10-13 08:55:38,086 | INFO     | exitmsg: OK
[2025-10-13 04:56:26] 2025-10-13 08:55:38,086 | INFO     | cpuconsumptiontime: 36158 s
[2025-10-13 04:56:26] 2025-10-13 08:55:38,086 | INFO     | nevents: 400
[2025-10-13 04:56:26] 2025-10-13 08:55:38,086 | INFO     | neventsw: 0
[2025-10-13 04:56:26] 2025-10-13 08:55:38,086 | INFO     | pid: 2438523
[2025-10-13 04:56:26] 2025-10-13 08:55:38,086 | INFO     | pgrp: 2438523
[2025-10-13 04:56:26] 2025-10-13 08:55:38,086 | INFO     | corecount: 12
[2025-10-13 04:56:26] 2025-10-13 08:55:38,087 | INFO     | event service: False
[2025-10-13 04:56:26] 2025-10-13 08:55:38,087 | INFO     | sizes: {0: 2348029, 1: 2348714, 2: 2348913, 13: 2348913, 20: 2349231, 24: 2349259, 17390: 2381701, 17394: 2390783, 17408: 2390921}
[2025-10-13 04:56:26] 2025-10-13 08:55:38,087 | INFO     | --------------------------------------------------
[2025-10-13 04:56:26] 2025-10-13 08:55:38,087 | INFO     | 
[2025-10-13 04:56:26] 2025-10-13 08:55:38,087 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-13 04:56:26] 2025-10-13 08:55:38,160 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 04:56:26] 2025-10-13 08:55:38,160 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 04:56:26] 2025-10-13 08:55:38,160 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 04:56:26] 2025-10-13 08:55:38,160 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 04:56:26] 2025-10-13 08:55:38,160 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 04:56:26] 2025-10-13 08:55:38,160 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 04:56:26] 2025-10-13 08:55:38,160 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 04:56:26] 2025-10-13 08:55:38,160 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 04:56:26] 2025-10-13 08:55:38,161 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 04:56:26] 2025-10-13 08:55:38,161 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 04:56:26] 2025-10-13 08:55:38,161 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 04:56:26] 2025-10-13 08:55:38,161 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 04:56:26] 2025-10-13 08:55:38,161 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 04:56:26] 2025-10-13 08:55:38,161 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 04:56:26] 2025-10-13 08:55:38,161 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 04:56:26] 2025-10-13 08:55:38,161 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 04:56:26] 2025-10-13 08:55:38,161 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 04:56:26] 2025-10-13 08:55:38,161 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 04:56:26] 2025-10-13 08:55:38,161 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 04:56:26] 2025-10-13 08:55:38,161 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 04:56:26] 2025-10-13 08:55:38,162 | INFO     | job 6840749042 has completed (purged errors)
[2025-10-13 04:56:26] 2025-10-13 08:55:38,162 | INFO     | overall cleanup function is called
[2025-10-13 04:56:26] 2025-10-13 08:55:39,188 | INFO     | --- collectZombieJob: --- 10, [2438523]
[2025-10-13 04:56:26] 2025-10-13 08:55:39,188 | INFO     | zombie collector waiting for pid 2438523
[2025-10-13 04:56:26] 2025-10-13 08:55:39,207 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 04:56:26] 2025-10-13 08:55:39,207 | INFO     | collected zombie processes
[2025-10-13 04:56:26] 2025-10-13 08:55:39,208 | INFO     | will attempt to kill all subprocesses of pid=2438523
[2025-10-13 04:56:26] 2025-10-13 08:55:39,621 | INFO     | process IDs to be killed: [2438523] (in reverse order)
[2025-10-13 04:56:26] 2025-10-13 08:55:39,797 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 04:56:26] 2025-10-13 08:55:39,797 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 04:56:26] 2025-10-13 08:55:39,822 | INFO     | did not find any defunct processes belonging to 2438523
[2025-10-13 04:56:26] 2025-10-13 08:55:39,838 | INFO     | did not find any defunct processes belonging to 2438523
[2025-10-13 04:56:26] 2025-10-13 08:55:39,838 | INFO     | ready for new job
[2025-10-13 04:56:26] 2025-10-13 08:55:39,838 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 04:56:26] 2025-10-13 08:55:39,842 | INFO     | ***************************************
[2025-10-13 04:56:26] 2025-10-13 08:55:39,842 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 04:56:26] 2025-10-13 08:55:39,842 | INFO     | ***************************************
[2025-10-13 04:56:26] 2025-10-13 08:55:39,842 | INFO     | 
[2025-10-13 04:56:26] 2025-10-13 08:55:39,885 | INFO     | architecture information:
[2025-10-13 04:56:26] 2025-10-13 08:55:39,895 | INFO     | executing command: cat /etc/os-release
[2025-10-13 04:56:26] 2025-10-13 08:55:39,954 | INFO     | cat /etc/os-release:
[2025-10-13 04:56:26] NAME="CentOS Linux"
[2025-10-13 04:56:26] VERSION="7 (Core)"
[2025-10-13 04:56:26] ID="centos"
[2025-10-13 04:56:26] ID_LIKE="rhel fedora"
[2025-10-13 04:56:26] VERSION_ID="7"
[2025-10-13 04:56:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 04:56:26] ANSI_COLOR="0;31"
[2025-10-13 04:56:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 04:56:26] HOME_URL="https://www.centos.org/"
[2025-10-13 04:56:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 04:56:26] 
[2025-10-13 04:56:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 04:56:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 04:56:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 04:56:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 04:56:26] 
[2025-10-13 04:56:26] 2025-10-13 08:55:39,954 | INFO     | ***************************************
[2025-10-13 04:56:26] 2025-10-13 08:55:40,459 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-13 04:56:26] 2025-10-13 08:55:40,561 | INFO     | sufficient remaining disk space (126840995840 B)
[2025-10-13 04:56:26] 2025-10-13 08:55:40,561 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 04:56:26] 2025-10-13 08:55:40,561 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 04:56:26] 2025-10-13 08:55:40,562 | INFO     | update_server=False
[2025-10-13 04:56:26] 2025-10-13 08:55:40,562 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 04:56:26] 2025-10-13 08:55:40,562 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:56:26] 2025-10-13 08:55:40,562 | INFO     | aborting loop
[2025-10-13 04:56:26] 2025-10-13 08:55:40,874 | INFO     | all data control threads have been joined
[2025-10-13 04:56:26] 2025-10-13 08:55:40,992 | INFO     | all job control threads have been joined
[2025-10-13 04:56:26] 2025-10-13 08:55:41,411 | INFO     | all payload control threads have been joined
[2025-10-13 04:56:26] 2025-10-13 08:55:41,567 | INFO     | [job] retrieve thread has finished
[2025-10-13 04:56:26] 2025-10-13 08:55:41,571 | INFO     | [job] job monitor thread has finished
[2025-10-13 04:56:26] 2025-10-13 08:55:41,591 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 04:56:26] 2025-10-13 08:55:41,636 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 04:56:26] 2025-10-13 08:55:41,881 | INFO     | [data] control thread has finished
[2025-10-13 04:56:26] 2025-10-13 08:55:41,934 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 04:56:26] 2025-10-13 08:55:41,998 | INFO     | [job] control thread has finished
[2025-10-13 04:56:26] 2025-10-13 08:55:42,372 | INFO     | [payload] validate_post thread has finished
[2025-10-13 04:56:26] 2025-10-13 08:55:42,417 | INFO     | [payload] control thread has finished
[2025-10-13 04:56:26] 2025-10-13 08:55:42,575 | INFO     | [data] copytool_in thread has finished
[2025-10-13 04:56:26] 2025-10-13 08:55:42,597 | INFO     | [job] validate thread has finished
[2025-10-13 04:56:26] 2025-10-13 08:55:42,712 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 04:56:26] 2025-10-13 08:55:42,780 | INFO     | [payload] failed_post thread has finished
[2025-10-13 04:56:26] 2025-10-13 08:55:42,796 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:56:26] 2025-10-13 08:55:43,205 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 04:56:26] 2025-10-13 08:55:43,643 | INFO     | [data] copytool_out thread has finished
[2025-10-13 04:56:26] 2025-10-13 08:55:43,802 | INFO     | [job] queue monitor thread has finished
[2025-10-13 04:56:26] 2025-10-13 08:55:47,214 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 04:56:26] 2025-10-13 08:55:51,262 | INFO     | job.realtimelogging is not enabled
[2025-10-13 04:56:26] 2025-10-13 08:55:52,268 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 04:56:26] 2025-10-13 08:56:11,770 | INFO     | PID=2419195 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 04:56:26] 2025-10-13 08:56:11,770 | INFO     | .. there are 24 such processes running
[2025-10-13 04:56:26] 2025-10-13 08:56:11,770 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 04:56:26] 2025-10-13 08:56:11,770 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 04:56:26] 2025-10-13 08:56:11,770 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 04:56:26] 2025-10-13 08:56:19,919 | INFO     | [monitor] cgroup control has ended
[2025-10-13 04:56:26] 2025-10-13 08:56:20,768 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140048275900224)>', '<ExcThread(monitor, started 140047927990016)>']
[2025-10-13 04:56:26] 2025-10-13 08:56:20,821 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 04:56:26] 2025-10-13 08:56:20,821 | INFO     | [monitor] control thread has ended
[2025-10-13 04:56:26] 2025-10-13 08:56:25,794 | INFO     | all workflow threads have been joined
[2025-10-13 04:56:26] 2025-10-13 08:56:25,794 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 04:56:26] 2025-10-13 08:56:25,794 | INFO     | traces error code: 0
[2025-10-13 04:56:26] 2025-10-13 08:56:25,795 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 04:56:26] 2025-10-13 08:56:25,983 [wrapper] ==== pilot stdout END ====
[2025-10-13 04:56:26] 2025-10-13 08:56:26,009 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 04:56:26] 2025-10-13 08:56:26,025 [wrapper] pilotpid: 2419195
[2025-10-13 04:56:26] 2025-10-13 08:56:26,027 [wrapper] Pilot exit status: 0
[2025-10-13 04:56:26] 2025-10-13 08:56:26,043 [wrapper] pandaids: 6840749042
[2025-10-13 04:56:26] 2025-10-13 08:56:26,181 [wrapper] cleanup supervisor_pilot 3097581 2419196
[2025-10-13 04:56:26] 2025-10-13 08:56:26,185 [wrapper] Test setup, not cleaning
[2025-10-13 04:56:26] 2025-10-13 08:56:26,210 [wrapper] apfmon messages muted
[2025-10-13 04:56:26] 2025-10-13 08:56:26,230 [wrapper] ==== wrapper stdout END ====
[2025-10-13 04:56:26] 2025-10-13 08:56:26,235 [wrapper] ==== wrapper stderr END ====
[2025-10-13 04:56:26]  *** Error codes and diagnostics ***
[2025-10-13 04:56:26]     "exeErrorCode": 0,
[2025-10-13 04:56:26]     "exeErrorDiag": "",
[2025-10-13 04:56:26]     "pilotErrorCode": 0,
[2025-10-13 04:56:26]     "pilotErrorDiag": "",
[2025-10-13 04:56:26]  *** Listing of results directory ***
[2025-10-13 04:56:26] total 415372
[2025-10-13 04:56:26] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 16:23 pilot3.tar.gz
[2025-10-13 04:56:26] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 16:24 queuedata.json
[2025-10-13 04:56:26] -rwx------. 1 boincer umatlas     36292 Oct 12 16:26 runpilot2-wrapper.sh
[2025-10-13 04:56:26] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 04:56:26] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:04 run_atlas
[2025-10-13 04:56:26] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:04 job.xml
[2025-10-13 04:56:26] -rw-r--r--. 2 boincer umatlas 222009975 Oct 13 00:04 EVNT.46676267._004496.pool.root.1
[2025-10-13 04:56:26] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:04 start_atlas.sh
[2025-10-13 04:56:26] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:04 shared
[2025-10-13 04:56:26] -rw-r--r--. 2 boincer umatlas    569682 Oct 13 00:04 input.tar.gz
[2025-10-13 04:56:26] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:04 boinc_lockfile
[2025-10-13 04:56:26] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:04 pandaJob.out
[2025-10-13 04:56:26] -rw-------. 1 boincer umatlas    974373 Oct 13 00:04 agis_schedconf.cvmfs.json
[2025-10-13 04:56:26] drwx------. 5 boincer umatlas      4096 Oct 13 00:04 pilot3
[2025-10-13 04:56:26] -rw-r--r--. 1 boincer umatlas      6947 Oct 13 04:54 init_data.xml
[2025-10-13 04:56:26] -rw-------. 1 boincer umatlas 193672146 Oct 13 04:54 HITS.46676269._088608.pool.root.1
[2025-10-13 04:56:26] -rw-r--r--. 1 boincer umatlas       531 Oct 13 04:54 boinc_task_state.xml
[2025-10-13 04:56:26] -rw-------. 1 boincer umatlas      1048 Oct 13 04:55 memory_monitor_summary.json
[2025-10-13 04:56:26] -rw-------. 1 boincer umatlas   1560580 Oct 13 04:55 agis_ddmendpoints.agis.ALL.json
[2025-10-13 04:56:26] -rw-------. 1 boincer umatlas    579844 Oct 13 04:55 log.46676269._088608.job.log.tgz.1
[2025-10-13 04:56:26] -rw-------. 1 boincer umatlas        95 Oct 13 04:55 pilot_heartbeat.json
[2025-10-13 04:56:26] -rw-------. 1 boincer umatlas      7804 Oct 13 04:55 heartbeat.json
[2025-10-13 04:56:26] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 04:56 boinc_mmap_file
[2025-10-13 04:56:26] -rw-r--r--. 1 boincer umatlas        28 Oct 13 04:56 wrapper_checkpoint.txt
[2025-10-13 04:56:26] -rw-------. 1 boincer umatlas      4897 Oct 13 04:56 pilotlog.txt
[2025-10-13 04:56:26] -rw-------. 1 boincer umatlas   2294709 Oct 13 04:56 log.46676269._088608.job.log.1
[2025-10-13 04:56:26] -rw-------. 1 boincer umatlas       357 Oct 13 04:56 output.list
[2025-10-13 04:56:26] -rw-r--r--. 1 boincer umatlas       620 Oct 13 04:56 runtime_log
[2025-10-13 04:56:26] -rw-------. 1 boincer umatlas   2897920 Oct 13 04:56 result.tar.gz
[2025-10-13 04:56:26] -rw-r--r--. 1 boincer umatlas      8706 Oct 13 04:56 runtime_log.err
[2025-10-13 04:56:26] -rw-------. 1 boincer umatlas       659 Oct 13 04:56 Kk9KDmkpHS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0RlNDmNYCtXm.diag
[2025-10-13 04:56:26] -rw-r--r--. 1 boincer umatlas     21034 Oct 13 04:56 stderr.txt
[2025-10-13 04:56:26] HITS file was successfully produced:
[2025-10-13 04:56:26] -rw-------. 1 boincer umatlas 193672146 Oct 13 04:54 shared/HITS.pool.root.1
[2025-10-13 04:56:26]  *** Contents of shared directory: ***
[2025-10-13 04:56:26] total 409360
[2025-10-13 04:56:26] -rw-r--r--. 2 boincer umatlas 222009975 Oct 13 00:04 ATLAS.root_0
[2025-10-13 04:56:26] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:04 start_atlas.sh
[2025-10-13 04:56:26] -rw-r--r--. 2 boincer umatlas    569682 Oct 13 00:04 input.tar.gz
[2025-10-13 04:56:26] -rw-------. 1 boincer umatlas 193672146 Oct 13 04:54 HITS.pool.root.1
[2025-10-13 04:56:26] -rw-------. 1 boincer umatlas   2897920 Oct 13 04:56 result.tar.gz
04:56:28 (2413964): run_atlas exited; CPU time 36795.957479
04:56:28 (2413964): called boinc_finish(0)

</stderr_txt>
]]>

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