Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:16 (2845379): wrapper (7.7.26015): starting
00:01:16 (2845379): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 00:01:16] Arguments: --nthreads 9
[2025-10-13 00:01:16] Threads: 9
[2025-10-13 00:01:16] Checking for CVMFS
[2025-10-13 00:01:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:01:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:01:17] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:01:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:01:19] 2.13.2.0 941838 139021 287544 151647 0 658 16707843 32935937 18287 16776704 0 97821949 99.720 75180702 29844 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:01:19] CVMFS is ok
[2025-10-13 00:01:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:01:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:01:19] Further information can be found at the LHC@home message board.
[2025-10-13 00:01:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:01:19] Checking for apptainer binary...
[2025-10-13 00:01:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:01:19] Running /usr/bin/apptainer --version
[2025-10-13 00:01:19] apptainer version 1.4.3-1.el9
[2025-10-13 00:01:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:01:20] c-6-7.aglt2.org
[2025-10-13 00:01:20] apptainer works
[2025-10-13 00:01:20] Set ATHENA_PROC_NUMBER=9
[2025-10-13 00:01:20] Set ATHENA_CORE_NUMBER=9
[2025-10-13 00:01:20] Starting ATLAS job with PandaID=6840961658
[2025-10-13 00:01:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 11:43:10]  *** The last 200 lines of the pilot log: ***
[2025-10-13 11:43:10] 2025-10-13 15:42:12,239 | INFO     | intersect: -9688252896.121447
[2025-10-13 11:43:10] 2025-10-13 15:42:12,240 | INFO     | chi2: 2.4367663177252967
[2025-10-13 11:43:10] 2025-10-13 15:42:12,240 | INFO     | current chi2=2.4367663177252967 (change=59.02845519941236 %)
[2025-10-13 11:43:10] 2025-10-13 15:42:12,241 | INFO     | sum of square deviations: 95352837424.3194
[2025-10-13 11:43:10] 2025-10-13 15:42:12,251 | INFO     | sum of deviations: 430649418249.69293
[2025-10-13 11:43:10] 2025-10-13 15:42:12,252 | INFO     | mean x: 1760349508.8933334
[2025-10-13 11:43:10] 2025-10-13 15:42:12,252 | INFO     | mean y: 2185426.842962963
[2025-10-13 11:43:10] 2025-10-13 15:42:12,252 | INFO     | -- intersect: -7948217648.710378
[2025-10-13 11:43:10] 2025-10-13 15:42:12,252 | INFO     | intersect: -7948217648.710378
[2025-10-13 11:43:10] 2025-10-13 15:42:12,253 | INFO     | chi2: 1.386631015490069
[2025-10-13 11:43:10] 2025-10-13 15:42:12,253 | INFO     | current chi2=1.386631015490069 (change=43.09544557458925 %)
[2025-10-13 11:43:10] 2025-10-13 15:42:12,254 | INFO     | sum of square deviations: 93249088358.8001
[2025-10-13 11:43:10] 2025-10-13 15:42:12,264 | INFO     | sum of deviations: 342408768837.2003
[2025-10-13 11:43:10] 2025-10-13 15:42:12,265 | INFO     | mean x: 1760349661.4
[2025-10-13 11:43:10] 2025-10-13 15:42:12,265 | INFO     | mean y: 2191822.1820895523
[2025-10-13 11:43:10] 2025-10-13 15:42:12,265 | INFO     | -- intersect: -6461776575.703839
[2025-10-13 11:43:10] 2025-10-13 15:42:12,265 | INFO     | intersect: -6461776575.703839
[2025-10-13 11:43:10] 2025-10-13 15:42:12,266 | INFO     | chi2: 0.6885753190190832
[2025-10-13 11:43:10] 2025-10-13 15:42:12,266 | INFO     | current chi2=0.6885753190190832 (change=50.34184932206178 %)
[2025-10-13 11:43:10] 2025-10-13 15:42:12,267 | INFO     | sum of square deviations: 91176420800.58658
[2025-10-13 11:43:10] 2025-10-13 15:42:12,277 | INFO     | sum of deviations: 294612548202.64667
[2025-10-13 11:43:10] 2025-10-13 15:42:12,278 | INFO     | mean x: 1760349813.9097745
[2025-10-13 11:43:10] 2025-10-13 15:42:12,278 | INFO     | mean y: 2195334.777443609
[2025-10-13 11:43:10] 2025-10-13 15:42:12,278 | INFO     | -- intersect: -5685910645.367337
[2025-10-13 11:43:10] 2025-10-13 15:42:12,278 | INFO     | intersect: -5685910645.367337
[2025-10-13 11:43:10] 2025-10-13 15:42:12,279 | INFO     | chi2: 0.46284336185604924
[2025-10-13 11:43:10] 2025-10-13 15:42:12,279 | INFO     | current chi2=0.46284336185604924 (change=32.78246415869257 %)
[2025-10-13 11:43:10] 2025-10-13 15:42:12,280 | INFO     | sum of square deviations: 89134806488.24803
[2025-10-13 11:43:10] 2025-10-13 15:42:12,290 | INFO     | sum of deviations: 254482406475.92142
[2025-10-13 11:43:10] 2025-10-13 15:42:12,290 | INFO     | mean x: 1760349966.4151516
[2025-10-13 11:43:10] 2025-10-13 15:42:12,291 | INFO     | mean y: 2198331.587878788
[2025-10-13 11:43:10] 2025-10-13 15:42:12,291 | INFO     | -- intersect: -5023650866.303169
[2025-10-13 11:43:10] 2025-10-13 15:42:12,291 | INFO     | intersect: -5023650866.303169
[2025-10-13 11:43:10] 2025-10-13 15:42:12,292 | INFO     | chi2: 0.3370267851059208
[2025-10-13 11:43:10] 2025-10-13 15:42:12,292 | INFO     | current chi2=0.3370267851059208 (change=27.18340309464331 %)
[2025-10-13 11:43:10] 2025-10-13 15:42:12,293 | INFO     | sum of square deviations: 87124090004.03964
[2025-10-13 11:43:10] 2025-10-13 15:42:12,303 | INFO     | sum of deviations: 238014740957.62137
[2025-10-13 11:43:10] 2025-10-13 15:42:12,303 | INFO     | mean x: 1760350118.912977
[2025-10-13 11:43:10] 2025-10-13 15:42:12,303 | INFO     | mean y: 2199577.2916030535
[2025-10-13 11:43:10] 2025-10-13 15:42:12,304 | INFO     | -- intersect: -4806909792.210714
[2025-10-13 11:43:10] 2025-10-13 15:42:12,304 | INFO     | intersect: -4806909792.210714
[2025-10-13 11:43:10] 2025-10-13 15:42:12,305 | INFO     | chi2: 0.30779995063160254
[2025-10-13 11:43:10] 2025-10-13 15:42:12,305 | INFO     | current chi2=0.30779995063160254 (change=8.671961922887784 %)
[2025-10-13 11:43:10] 2025-10-13 15:42:12,305 | INFO     | left removable region: 60
[2025-10-13 11:43:10] 2025-10-13 15:42:12,306 | INFO     | sum of square deviations: 73532460897.3768
[2025-10-13 11:43:10] 2025-10-13 15:42:12,314 | INFO     | time since job start (41971s) is within the limit (172800.0s)
[2025-10-13 11:43:10] 2025-10-13 15:42:12,316 | INFO     | sum of deviations: 215449758601.13745
[2025-10-13 11:43:10] 2025-10-13 15:42:12,316 | INFO     | mean x: 1760350850.904685
[2025-10-13 11:43:10] 2025-10-13 15:42:12,316 | INFO     | mean y: 2200785.88368336
[2025-10-13 11:43:10] 2025-10-13 15:42:12,316 | INFO     | -- intersect: -5155618784.57831
[2025-10-13 11:43:10] 2025-10-13 15:42:12,316 | INFO     | intersect: -5155618784.57831
[2025-10-13 11:43:10] 2025-10-13 15:42:12,317 | INFO     | chi2: 0.28733436697932646
[2025-10-13 11:43:10] 2025-10-13 15:42:12,317 | INFO     | -- intersect: -5155618784.57831
[2025-10-13 11:43:10] 2025-10-13 15:42:12,318 | INFO     | current memory leak: 2.93 B/s (using 619 data points, chi2=0.29)
[2025-10-13 11:43:10] 2025-10-13 15:42:12,319 | INFO     | could have reported an average CPU frequency of 2600 MHz (26 samples)
[2025-10-13 11:43:10] 2025-10-13 15:42:12,319 | INFO     | ..............................
[2025-10-13 11:43:10] 2025-10-13 15:42:12,319 | INFO     | . Timing measurements:
[2025-10-13 11:43:10] 2025-10-13 15:42:12,319 | INFO     | . get job = 0 s
[2025-10-13 11:43:10] 2025-10-13 15:42:12,319 | INFO     | . initial setup = 6 s
[2025-10-13 11:43:10] 2025-10-13 15:42:12,319 | INFO     | . payload setup = 47 s
[2025-10-13 11:43:10] 2025-10-13 15:42:12,320 | INFO     | . stage-in = 0 s
[2025-10-13 11:43:10] 2025-10-13 15:42:12,320 | INFO     | . payload execution = 41825 s
[2025-10-13 11:43:10] 2025-10-13 15:42:12,320 | INFO     | . stage-out = 3 s
[2025-10-13 11:43:10] 2025-10-13 15:42:12,320 | INFO     | . log creation = 0 s
[2025-10-13 11:43:10] 2025-10-13 15:42:12,320 | INFO     | ..............................
[2025-10-13 11:43:10] 2025-10-13 15:42:12,639 | INFO     | 
[2025-10-13 11:43:10] 2025-10-13 15:42:12,640 | INFO     | job summary report
[2025-10-13 11:43:10] 2025-10-13 15:42:12,641 | INFO     | --------------------------------------------------
[2025-10-13 11:43:10] 2025-10-13 15:42:12,641 | INFO     | PanDA job id: 6840961658
[2025-10-13 11:43:10] 2025-10-13 15:42:12,641 | INFO     | task id: 46676269
[2025-10-13 11:43:10] 2025-10-13 15:42:12,641 | INFO     | errors: (none)
[2025-10-13 11:43:10] 2025-10-13 15:42:12,642 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 11:43:10] 2025-10-13 15:42:12,642 | INFO     | pilot state: finished 
[2025-10-13 11:43:10] 2025-10-13 15:42:12,642 | INFO     | transexitcode: 0
[2025-10-13 11:43:10] 2025-10-13 15:42:12,642 | INFO     | exeerrorcode: 0
[2025-10-13 11:43:10] 2025-10-13 15:42:12,642 | INFO     | exeerrordiag: 
[2025-10-13 11:43:10] 2025-10-13 15:42:12,642 | INFO     | exitcode: 0
[2025-10-13 11:43:10] 2025-10-13 15:42:12,642 | INFO     | exitmsg: OK
[2025-10-13 11:43:10] 2025-10-13 15:42:12,642 | INFO     | cpuconsumptiontime: 50902 s
[2025-10-13 11:43:10] 2025-10-13 15:42:12,642 | INFO     | nevents: 400
[2025-10-13 11:43:10] 2025-10-13 15:42:12,642 | INFO     | neventsw: 0
[2025-10-13 11:43:10] 2025-10-13 15:42:12,642 | INFO     | pid: 2871265
[2025-10-13 11:43:10] 2025-10-13 15:42:12,643 | INFO     | pgrp: 2871265
[2025-10-13 11:43:10] 2025-10-13 15:42:12,643 | INFO     | corecount: 9
[2025-10-13 11:43:10] 2025-10-13 15:42:12,643 | INFO     | event service: False
[2025-10-13 11:43:10] 2025-10-13 15:42:12,643 | INFO     | sizes: {0: 2348630, 1: 2348686, 2: 2348714, 3: 2348941, 4: 2348941, 15: 2348969, 26: 2349125, 37: 2349153, 38: 2349443, 49: 2349471, 41877: 2391876, 41881: 2400874
[2025-10-13 11:43:10] 2025-10-13 15:42:12,643 | INFO     | --------------------------------------------------
[2025-10-13 11:43:10] 2025-10-13 15:42:12,643 | INFO     | 
[2025-10-13 11:43:10] 2025-10-13 15:42:12,643 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 11:43:10] 2025-10-13 15:42:12,772 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 11:43:10] 2025-10-13 15:42:12,773 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 11:43:10] 2025-10-13 15:42:12,773 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 11:43:10] 2025-10-13 15:42:12,773 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 11:43:10] 2025-10-13 15:42:12,774 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 11:43:10] 2025-10-13 15:42:12,774 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 11:43:10] 2025-10-13 15:42:12,774 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 11:43:10] 2025-10-13 15:42:12,774 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 11:43:10] 2025-10-13 15:42:12,774 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 11:43:10] 2025-10-13 15:42:12,774 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 11:43:10] 2025-10-13 15:42:12,774 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 11:43:10] 2025-10-13 15:42:12,774 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 11:43:10] 2025-10-13 15:42:12,775 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 11:43:10] 2025-10-13 15:42:12,775 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 11:43:10] 2025-10-13 15:42:12,775 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 11:43:10] 2025-10-13 15:42:12,775 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 11:43:10] 2025-10-13 15:42:12,775 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 11:43:10] 2025-10-13 15:42:12,775 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 11:43:10] 2025-10-13 15:42:12,775 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 11:43:10] 2025-10-13 15:42:12,775 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 11:43:10] 2025-10-13 15:42:12,776 | INFO     | job 6840961658 has completed (purged errors)
[2025-10-13 11:43:10] 2025-10-13 15:42:12,776 | INFO     | overall cleanup function is called
[2025-10-13 11:43:10] 2025-10-13 15:42:13,816 | INFO     | --- collectZombieJob: --- 10, [2871265]
[2025-10-13 11:43:10] 2025-10-13 15:42:13,816 | INFO     | zombie collector waiting for pid 2871265
[2025-10-13 11:43:10] 2025-10-13 15:42:13,816 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 11:43:10] 2025-10-13 15:42:13,817 | INFO     | collected zombie processes
[2025-10-13 11:43:10] 2025-10-13 15:42:13,817 | INFO     | will attempt to kill all subprocesses of pid=2871265
[2025-10-13 11:43:10] 2025-10-13 15:42:14,407 | INFO     | process IDs to be killed: [2871265] (in reverse order)
[2025-10-13 11:43:10] 2025-10-13 15:42:14,522 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 11:43:10] 2025-10-13 15:42:14,523 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 11:43:10] 2025-10-13 15:42:14,575 | INFO     | did not find any defunct processes belonging to 2871265
[2025-10-13 11:43:10] 2025-10-13 15:42:14,611 | INFO     | did not find any defunct processes belonging to 2871265
[2025-10-13 11:43:10] 2025-10-13 15:42:14,613 | INFO     | ready for new job
[2025-10-13 11:43:10] 2025-10-13 15:42:14,613 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 11:43:10] 2025-10-13 15:42:14,649 | INFO     | ***************************************
[2025-10-13 11:43:10] 2025-10-13 15:42:14,649 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 11:43:10] 2025-10-13 15:42:14,649 | INFO     | ***************************************
[2025-10-13 11:43:10] 2025-10-13 15:42:14,649 | INFO     | 
[2025-10-13 11:43:10] 2025-10-13 15:42:14,664 | INFO     | architecture information:
[2025-10-13 11:43:10] 2025-10-13 15:42:14,665 | INFO     | executing command: cat /etc/os-release
[2025-10-13 11:43:10] 2025-10-13 15:42:14,692 | INFO     | cat /etc/os-release:
[2025-10-13 11:43:10] NAME="CentOS Linux"
[2025-10-13 11:43:10] VERSION="7 (Core)"
[2025-10-13 11:43:10] ID="centos"
[2025-10-13 11:43:10] ID_LIKE="rhel fedora"
[2025-10-13 11:43:10] VERSION_ID="7"
[2025-10-13 11:43:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 11:43:10] ANSI_COLOR="0;31"
[2025-10-13 11:43:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 11:43:10] HOME_URL="https://www.centos.org/"
[2025-10-13 11:43:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 11:43:10] 
[2025-10-13 11:43:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 11:43:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 11:43:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 11:43:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 11:43:10] 
[2025-10-13 11:43:10] 2025-10-13 15:42:14,692 | INFO     | ***************************************
[2025-10-13 11:43:10] 2025-10-13 15:42:15,196 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 11:43:10] 2025-10-13 15:42:15,440 | INFO     | sufficient remaining disk space (75881250816 B)
[2025-10-13 11:43:10] 2025-10-13 15:42:15,441 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 11:43:10] 2025-10-13 15:42:15,441 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 11:43:10] 2025-10-13 15:42:15,441 | INFO     | update_server=False
[2025-10-13 11:43:10] 2025-10-13 15:42:15,441 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 11:43:10] 2025-10-13 15:42:15,466 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:43:10] 2025-10-13 15:42:15,466 | INFO     | aborting loop
[2025-10-13 11:43:10] 2025-10-13 15:42:15,754 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 11:43:10] 2025-10-13 15:42:15,940 | INFO     | all job control threads have been joined
[2025-10-13 11:43:10] 2025-10-13 15:42:16,392 | INFO     | all data control threads have been joined
[2025-10-13 11:43:10] 2025-10-13 15:42:16,447 | INFO     | [job] retrieve thread has finished
[2025-10-13 11:43:10] 2025-10-13 15:42:16,448 | INFO     | all payload control threads have been joined
[2025-10-13 11:43:10] 2025-10-13 15:42:16,472 | INFO     | [job] job monitor thread has finished
[2025-10-13 11:43:10] 2025-10-13 15:42:16,492 | INFO     | [payload] validate_post thread has finished
[2025-10-13 11:43:10] 2025-10-13 15:42:16,532 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 11:43:10] 2025-10-13 15:42:16,729 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 11:43:10] 2025-10-13 15:42:16,946 | INFO     | [job] control thread has finished
[2025-10-13 11:43:10] 2025-10-13 15:42:17,012 | INFO     | [payload] failed_post thread has finished
[2025-10-13 11:43:10] 2025-10-13 15:42:17,126 | INFO     | [data] copytool_in thread has finished
[2025-10-13 11:43:10] 2025-10-13 15:42:17,367 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 11:43:10] 2025-10-13 15:42:17,397 | INFO     | [data] control thread has finished
[2025-10-13 11:43:10] 2025-10-13 15:42:17,434 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:43:10] 2025-10-13 15:42:17,454 | INFO     | [payload] control thread has finished
[2025-10-13 11:43:10] 2025-10-13 15:42:17,654 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 11:43:10] 2025-10-13 15:42:17,823 | INFO     | [job] validate thread has finished
[2025-10-13 11:43:10] 2025-10-13 15:42:17,830 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 11:43:10] 2025-10-13 15:42:18,440 | INFO     | [job] queue monitor thread has finished
[2025-10-13 11:43:10] 2025-10-13 15:42:18,738 | INFO     | [data] copytool_out thread has finished
[2025-10-13 11:43:10] 2025-10-13 15:42:19,761 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 11:43:10] 2025-10-13 15:42:45,826 | INFO     | PID=2853874 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 11:43:10] 2025-10-13 15:42:45,826 | INFO     | .. there are 19 such processes running
[2025-10-13 11:43:10] 2025-10-13 15:42:45,833 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 11:43:10] 2025-10-13 15:42:45,833 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 11:43:10] 2025-10-13 15:42:45,833 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 11:43:10] 2025-10-13 15:43:03,835 | INFO     | [monitor] cgroup control has ended
[2025-10-13 11:43:10] 2025-10-13 15:43:04,976 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140277477865280)>', '<ExcThread(monitor, started 140277205407488)>']
[2025-10-13 11:43:10] 2025-10-13 15:43:05,961 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 11:43:10] 2025-10-13 15:43:05,961 | INFO     | [monitor] control thread has ended
[2025-10-13 11:43:10] 2025-10-13 15:43:10,002 | INFO     | all workflow threads have been joined
[2025-10-13 11:43:10] 2025-10-13 15:43:10,003 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 11:43:10] 2025-10-13 15:43:10,003 | INFO     | traces error code: 0
[2025-10-13 11:43:10] 2025-10-13 15:43:10,004 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 11:43:10] 2025-10-13 15:43:10,271 [wrapper] ==== pilot stdout END ====
[2025-10-13 11:43:10] 2025-10-13 15:43:10,275 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 11:43:10] 2025-10-13 15:43:10,281 [wrapper] pilotpid: 2853874
[2025-10-13 11:43:10] 2025-10-13 15:43:10,285 [wrapper] Pilot exit status: 0
[2025-10-13 11:43:10] 2025-10-13 15:43:10,299 [wrapper] pandaids: 6840961658
[2025-10-13 11:43:10] 2025-10-13 15:43:10,363 [wrapper] cleanup supervisor_pilot  650124 2853875
[2025-10-13 11:43:10] 2025-10-13 15:43:10,367 [wrapper] Test setup, not cleaning
[2025-10-13 11:43:10] 2025-10-13 15:43:10,370 [wrapper] apfmon messages muted
[2025-10-13 11:43:10] 2025-10-13 15:43:10,373 [wrapper] ==== wrapper stdout END ====
[2025-10-13 11:43:10] 2025-10-13 15:43:10,376 [wrapper] ==== wrapper stderr END ====
[2025-10-13 11:43:10]  *** Error codes and diagnostics ***
[2025-10-13 11:43:10]     "exeErrorCode": 0,
[2025-10-13 11:43:10]     "exeErrorDiag": "",
[2025-10-13 11:43:10]     "pilotErrorCode": 0,
[2025-10-13 11:43:10]     "pilotErrorDiag": "",
[2025-10-13 11:43:10]  *** Listing of results directory ***
[2025-10-13 11:43:10] total 424224
[2025-10-13 11:43:10] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 18:57 pilot3.tar.gz
[2025-10-13 11:43:10] -rwx------. 1 boincer umatlas     36292 Oct 12 19:10 runpilot2-wrapper.sh
[2025-10-13 11:43:10] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 19:10 queuedata.json
[2025-10-13 11:43:10] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 11:43:10] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:01 run_atlas
[2025-10-13 11:43:10] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:01 job.xml
[2025-10-13 11:43:10] -rw-r--r--. 2 boincer umatlas 221002967 Oct 13 00:01 EVNT.46676267._004647.pool.root.1
[2025-10-13 11:43:10] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:01 start_atlas.sh
[2025-10-13 11:43:10] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:01 shared
[2025-10-13 11:43:10] -rw-r--r--. 2 boincer umatlas    569678 Oct 13 00:01 input.tar.gz
[2025-10-13 11:43:10] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:01 boinc_lockfile
[2025-10-13 11:43:10] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:01 pandaJob.out
[2025-10-13 11:43:10] -rw-------. 1 boincer umatlas    974373 Oct 13 00:02 agis_schedconf.cvmfs.json
[2025-10-13 11:43:10] drwx------. 5 boincer umatlas      4096 Oct 13 00:02 pilot3
[2025-10-13 11:43:10] -rw-r--r--. 1 boincer umatlas      6658 Oct 13 11:37 init_data.xml
[2025-10-13 11:43:10] -rw-r--r--. 1 boincer umatlas       531 Oct 13 11:41 boinc_task_state.xml
[2025-10-13 11:43:10] -rw-------. 1 boincer umatlas 198891351 Oct 13 11:41 HITS.46676269._091944.pool.root.1
[2025-10-13 11:43:10] -rw-------. 1 boincer umatlas      1041 Oct 13 11:41 memory_monitor_summary.json
[2025-10-13 11:43:10] -rw-------. 1 boincer umatlas        95 Oct 13 11:41 pilot_heartbeat.json
[2025-10-13 11:43:10] -rw-------. 1 boincer umatlas   1560580 Oct 13 11:42 agis_ddmendpoints.agis.ALL.json
[2025-10-13 11:43:10] -rw-------. 1 boincer umatlas    798828 Oct 13 11:42 log.46676269._091944.job.log.tgz.1
[2025-10-13 11:43:10] -rw-------. 1 boincer umatlas      7824 Oct 13 11:42 heartbeat.json
[2025-10-13 11:43:10] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 11:43 boinc_mmap_file
[2025-10-13 11:43:10] -rw-r--r--. 1 boincer umatlas        28 Oct 13 11:43 wrapper_checkpoint.txt
[2025-10-13 11:43:10] -rw-------. 1 boincer umatlas      4824 Oct 13 11:43 pilotlog.txt
[2025-10-13 11:43:10] -rw-------. 1 boincer umatlas   4506070 Oct 13 11:43 log.46676269._091944.job.log.1
[2025-10-13 11:43:10] -rw-------. 1 boincer umatlas       357 Oct 13 11:43 output.list
[2025-10-13 11:43:10] -rw-r--r--. 1 boincer umatlas       620 Oct 13 11:43 runtime_log
[2025-10-13 11:43:10] -rw-------. 1 boincer umatlas   5324800 Oct 13 11:43 result.tar.gz
[2025-10-13 11:43:10] -rw-------. 1 boincer umatlas       657 Oct 13 11:43 XWzNDmtNKS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmFGVMDmyYcW1n.diag
[2025-10-13 11:43:10] -rw-r--r--. 1 boincer umatlas      8689 Oct 13 11:43 runtime_log.err
[2025-10-13 11:43:10] -rw-r--r--. 1 boincer umatlas     21074 Oct 13 11:43 stderr.txt
[2025-10-13 11:43:10] HITS file was successfully produced:
[2025-10-13 11:43:10] -rw-------. 1 boincer umatlas 198891351 Oct 13 11:41 shared/HITS.pool.root.1
[2025-10-13 11:43:10]  *** Contents of shared directory: ***
[2025-10-13 11:43:10] total 415836
[2025-10-13 11:43:10] -rw-r--r--. 2 boincer umatlas 221002967 Oct 13 00:01 ATLAS.root_0
[2025-10-13 11:43:10] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:01 start_atlas.sh
[2025-10-13 11:43:10] -rw-r--r--. 2 boincer umatlas    569678 Oct 13 00:01 input.tar.gz
[2025-10-13 11:43:10] -rw-------. 1 boincer umatlas 198891351 Oct 13 11:41 HITS.pool.root.1
[2025-10-13 11:43:10] -rw-------. 1 boincer umatlas   5324800 Oct 13 11:43 result.tar.gz
11:43:11 (2845379): run_atlas exited; CPU time 52227.924848
11:43:11 (2845379): called boinc_finish(0)

</stderr_txt>
]]>

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