Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:04:43 (2877044): wrapper (7.7.26015): starting
20:04:43 (2877044): wrapper: running run_atlas (--nthreads 6)
[2025-10-13 20:04:43] Arguments: --nthreads 6
[2025-10-13 20:04:43] Threads: 6
[2025-10-13 20:04:43] Checking for CVMFS
[2025-10-13 20:04:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 20:04:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 20:04:43] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 20:04:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 20:04:43] 2.11.5.0 3385007 5766 100008 151658 1 57 13674502 20971520 929 130560 0 11436394 99.996 195102 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.35.143:3126 1
[2025-10-13 20:04:43] CVMFS is ok
[2025-10-13 20:04:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 20:04:43] Checking for apptainer binary...
[2025-10-13 20:04:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 20:04:43] Running /usr/bin/apptainer --version
[2025-10-13 20:04:43] apptainer version 1.3.6-1.el9
[2025-10-13 20:04:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 20:04:43] testio006
[2025-10-13 20:04:43] apptainer works
[2025-10-13 20:04:43] Set ATHENA_PROC_NUMBER=6
[2025-10-13 20:04:43] Set ATHENA_CORE_NUMBER=6
[2025-10-13 20:04:44] Starting ATLAS job with PandaID=6840852512
[2025-10-13 20:04:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 21:26:22]  *** The last 200 lines of the pilot log: ***
[2025-10-13 21:26:22] 2025-10-13 12:25:29,612 | INFO     | monitor loop #373: job 0:6840852512 is in state 'finished'
[2025-10-13 21:26:22] 2025-10-13 12:25:29,612 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 21:26:22] 2025-10-13 12:25:30,250 | INFO     | time since job start (4820s) is within the limit (172800.0s)
[2025-10-13 21:26:22] 2025-10-13 12:25:32,115 | INFO     | monitor loop #374: job 0:6840852512 is in state 'finished'
[2025-10-13 21:26:22] 2025-10-13 12:25:32,115 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 21:26:22] 2025-10-13 12:25:32,256 | INFO     | time since job start (4822s) is within the limit (172800.0s)
[2025-10-13 21:26:22] 2025-10-13 12:25:34,261 | INFO     | time since job start (4824s) is within the limit (172800.0s)
[2025-10-13 21:26:22] 2025-10-13 12:25:34,618 | INFO     | monitor loop #375: job 0:6840852512 is in state 'finished'
[2025-10-13 21:26:22] 2025-10-13 12:25:34,618 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 21:26:22] 2025-10-13 12:25:36,267 | INFO     | time since job start (4826s) is within the limit (172800.0s)
[2025-10-13 21:26:22] 2025-10-13 12:25:37,121 | INFO     | monitor loop #376: job 0:6840852512 is in state 'finished'
[2025-10-13 21:26:22] 2025-10-13 12:25:37,121 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 21:26:22] 2025-10-13 12:25:38,272 | INFO     | time since job start (4828s) is within the limit (172800.0s)
[2025-10-13 21:26:22] 2025-10-13 12:25:39,624 | INFO     | monitor loop #377: job 0:6840852512 is in state 'finished'
[2025-10-13 21:26:22] 2025-10-13 12:25:39,624 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 21:26:22] 2025-10-13 12:25:40,277 | INFO     | time since job start (4830s) is within the limit (172800.0s)
[2025-10-13 21:26:22] 2025-10-13 12:25:42,127 | INFO     | monitor loop #378: job 0:6840852512 is in state 'finished'
[2025-10-13 21:26:22] 2025-10-13 12:25:42,127 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 21:26:22] 2025-10-13 12:25:42,283 | INFO     | time since job start (4832s) is within the limit (172800.0s)
[2025-10-13 21:26:22] 2025-10-13 12:25:43,367 | INFO     | PID=2880818 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 21:26:22] 2025-10-13 12:25:43,368 | INFO     | .. there are 2 such processes running
[2025-10-13 21:26:22] 2025-10-13 12:25:44,368 | INFO     | time since job start (4834s) is within the limit (172800.0s)
[2025-10-13 21:26:22] 2025-10-13 12:25:44,630 | INFO     | monitor loop #379: job 0:6840852512 is in state 'finished'
[2025-10-13 21:26:22] 2025-10-13 12:25:44,630 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 21:26:22] 2025-10-13 12:25:46,373 | INFO     | time since job start (4836s) is within the limit (172800.0s)
[2025-10-13 21:26:22] 2025-10-13 12:25:47,133 | INFO     | monitor loop #380: job 0:6840852512 is in state 'finished'
[2025-10-13 21:26:22] 2025-10-13 12:25:47,133 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 21:26:22] 2025-10-13 12:25:48,377 | INFO     | time since job start (4838s) is within the limit (172800.0s)
[2025-10-13 21:26:22] 2025-10-13 12:25:48,378 | INFO     | 4860s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-13 21:26:22] 2025-10-13 12:25:49,636 | INFO     | monitor loop #381: job 0:6840852512 is in state 'finished'
[2025-10-13 21:26:22] 2025-10-13 12:25:49,636 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 21:26:22] 2025-10-13 12:25:50,383 | INFO     | time since job start (4840s) is within the limit (172800.0s)
[2025-10-13 21:26:22] 2025-10-13 12:25:52,139 | INFO     | monitor loop #382: job 0:6840852512 is in state 'finished'
[2025-10-13 21:26:22] 2025-10-13 12:25:52,139 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 21:26:22] 2025-10-13 12:25:52,388 | INFO     | time since job start (4842s) is within the limit (172800.0s)
[2025-10-13 21:26:22] 2025-10-13 12:25:52,528 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 21:26:22] 2025-10-13 12:25:52,530 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4046.64425
[2025-10-13 21:26:22] 2025-10-13 12:25:52,532 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6840852512/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 21:26:22] 2025-10-13 12:25:52,532 | INFO     | extracted standard info from prmon json
[2025-10-13 21:26:22] 2025-10-13 12:25:52,532 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 21:26:22] 2025-10-13 12:25:52,532 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 21:26:22] 2025-10-13 12:25:52,533 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 21:26:22] 2025-10-13 12:25:52,533 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 21:26:22] 2025-10-13 12:25:52,534 | INFO     | fitting pss+swap vs Time
[2025-10-13 21:26:22] 2025-10-13 12:25:52,534 | INFO     | sum of square deviations: 110960220.0
[2025-10-13 21:26:22] 2025-10-13 12:25:52,534 | INFO     | sum of deviations: 1541425531.0
[2025-10-13 21:26:22] 2025-10-13 12:25:52,534 | INFO     | mean x: 1760355970.0
[2025-10-13 21:26:22] 2025-10-13 12:25:52,534 | INFO     | mean y: 2452452.9295774647
[2025-10-13 21:26:22] 2025-10-13 12:25:52,534 | INFO     | -- intersect: -24451875736.09411
[2025-10-13 21:26:22] 2025-10-13 12:25:52,534 | INFO     | intersect: -24451875736.09411
[2025-10-13 21:26:22] 2025-10-13 12:25:52,534 | INFO     | chi2: 0.015943098616213902
[2025-10-13 21:26:22] 2025-10-13 12:25:52,534 | INFO     | -- intersect: -24451875736.09411
[2025-10-13 21:26:22] 2025-10-13 12:25:52,534 | INFO     | current memory leak: 13.89 B/s (using 71 data points, chi2=0.02)
[2025-10-13 21:26:22] 2025-10-13 12:25:52,535 | INFO     | could have reported an average CPU frequency of 4031 MHz (6 samples)
[2025-10-13 21:26:22] 2025-10-13 12:25:52,535 | INFO     | ..............................
[2025-10-13 21:26:22] 2025-10-13 12:25:52,535 | INFO     | . Timing measurements:
[2025-10-13 21:26:22] 2025-10-13 12:25:52,535 | INFO     | . get job = 0 s
[2025-10-13 21:26:22] 2025-10-13 12:25:52,535 | INFO     | . initial setup = 23 s
[2025-10-13 21:26:22] 2025-10-13 12:25:52,535 | INFO     | . payload setup = 2 s
[2025-10-13 21:26:22] 2025-10-13 12:25:52,535 | INFO     | . stage-in = 0 s
[2025-10-13 21:26:22] 2025-10-13 12:25:52,535 | INFO     | . payload execution = 4740 s
[2025-10-13 21:26:22] 2025-10-13 12:25:52,535 | INFO     | . stage-out = 0 s
[2025-10-13 21:26:22] 2025-10-13 12:25:52,535 | INFO     | . log creation = 0 s
[2025-10-13 21:26:22] 2025-10-13 12:25:52,535 | INFO     | ..............................
[2025-10-13 21:26:22] 2025-10-13 12:25:52,586 | INFO     | 
[2025-10-13 21:26:22] 2025-10-13 12:25:52,586 | INFO     | job summary report
[2025-10-13 21:26:22] 2025-10-13 12:25:52,586 | INFO     | --------------------------------------------------
[2025-10-13 21:26:22] 2025-10-13 12:25:52,586 | INFO     | PanDA job id: 6840852512
[2025-10-13 21:26:22] 2025-10-13 12:25:52,586 | INFO     | task id: 46676269
[2025-10-13 21:26:22] 2025-10-13 12:25:52,586 | INFO     | errors: (none)
[2025-10-13 21:26:22] 2025-10-13 12:25:52,586 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 21:26:22] 2025-10-13 12:25:52,586 | INFO     | pilot state: finished 
[2025-10-13 21:26:22] 2025-10-13 12:25:52,586 | INFO     | transexitcode: 0
[2025-10-13 21:26:22] 2025-10-13 12:25:52,586 | INFO     | exeerrorcode: 0
[2025-10-13 21:26:22] 2025-10-13 12:25:52,586 | INFO     | exeerrordiag: 
[2025-10-13 21:26:22] 2025-10-13 12:25:52,586 | INFO     | exitcode: 0
[2025-10-13 21:26:22] 2025-10-13 12:25:52,586 | INFO     | exitmsg: OK
[2025-10-13 21:26:22] 2025-10-13 12:25:52,586 | INFO     | cpuconsumptiontime: 26219 s
[2025-10-13 21:26:22] 2025-10-13 12:25:52,586 | INFO     | nevents: 400
[2025-10-13 21:26:22] 2025-10-13 12:25:52,587 | INFO     | neventsw: 0
[2025-10-13 21:26:22] 2025-10-13 12:25:52,587 | INFO     | pid: 2887581
[2025-10-13 21:26:22] 2025-10-13 12:25:52,587 | INFO     | pgrp: 2887581
[2025-10-13 21:26:22] 2025-10-13 12:25:52,587 | INFO     | corecount: 6
[2025-10-13 21:26:22] 2025-10-13 12:25:52,587 | INFO     | event service: False
[2025-10-13 21:26:22] 2025-10-13 12:25:52,587 | INFO     | sizes: {0: 2348857, 2: 2349119, 11: 2349147, 4747: 2375428, 4748: 2384482, 4828: 2384620}
[2025-10-13 21:26:22] 2025-10-13 12:25:52,587 | INFO     | --------------------------------------------------
[2025-10-13 21:26:22] 2025-10-13 12:25:52,587 | INFO     | 
[2025-10-13 21:26:22] 2025-10-13 12:25:52,587 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-13 21:26:22] 2025-10-13 12:25:52,598 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 21:26:22] 2025-10-13 12:25:52,598 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 21:26:22] 2025-10-13 12:25:52,598 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 21:26:22] 2025-10-13 12:25:52,598 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 21:26:22] 2025-10-13 12:25:52,598 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 21:26:22] 2025-10-13 12:25:52,599 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 21:26:22] 2025-10-13 12:25:52,599 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 21:26:22] 2025-10-13 12:25:52,599 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 21:26:22] 2025-10-13 12:25:52,599 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 21:26:22] 2025-10-13 12:25:52,599 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 21:26:22] 2025-10-13 12:25:52,599 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 21:26:22] 2025-10-13 12:25:52,599 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 21:26:22] 2025-10-13 12:25:52,599 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 21:26:22] 2025-10-13 12:25:52,599 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 21:26:22] 2025-10-13 12:25:52,599 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 21:26:22] 2025-10-13 12:25:52,599 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 21:26:22] 2025-10-13 12:25:52,599 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 21:26:22] 2025-10-13 12:25:52,599 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 21:26:22] 2025-10-13 12:25:52,599 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 21:26:22] 2025-10-13 12:25:52,599 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 21:26:22] 2025-10-13 12:25:52,599 | INFO     | job 6840852512 has completed (purged errors)
[2025-10-13 21:26:22] 2025-10-13 12:25:52,599 | INFO     | overall cleanup function is called
[2025-10-13 21:26:22] 2025-10-13 12:25:53,606 | INFO     | --- collectZombieJob: --- 10, [2887581]
[2025-10-13 21:26:22] 2025-10-13 12:25:53,606 | INFO     | zombie collector waiting for pid 2887581
[2025-10-13 21:26:22] 2025-10-13 12:25:53,606 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 21:26:22] 2025-10-13 12:25:53,606 | INFO     | collected zombie processes
[2025-10-13 21:26:22] 2025-10-13 12:25:53,606 | INFO     | will attempt to kill all subprocesses of pid=2887581
[2025-10-13 21:26:22] 2025-10-13 12:25:53,671 | INFO     | process IDs to be killed: [2887581] (in reverse order)
[2025-10-13 21:26:22] 2025-10-13 12:25:53,699 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 21:26:22] 2025-10-13 12:25:53,699 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 21:26:22] 2025-10-13 12:25:53,702 | INFO     | did not find any defunct processes belonging to 2887581
[2025-10-13 21:26:22] 2025-10-13 12:25:53,704 | INFO     | did not find any defunct processes belonging to 2887581
[2025-10-13 21:26:22] 2025-10-13 12:25:53,704 | INFO     | ready for new job
[2025-10-13 21:26:22] 2025-10-13 12:25:53,704 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 21:26:22] 2025-10-13 12:25:53,705 | INFO     | ***************************************
[2025-10-13 21:26:22] 2025-10-13 12:25:53,705 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 21:26:22] 2025-10-13 12:25:53,705 | INFO     | ***************************************
[2025-10-13 21:26:22] 2025-10-13 12:25:53,705 | INFO     | 
[2025-10-13 21:26:22] 2025-10-13 12:25:53,705 | INFO     | architecture information:
[2025-10-13 21:26:22] 2025-10-13 12:25:53,705 | INFO     | executing command: cat /etc/os-release
[2025-10-13 21:26:22] 2025-10-13 12:25:53,713 | INFO     | cat /etc/os-release:
[2025-10-13 21:26:22] NAME="CentOS Linux"
[2025-10-13 21:26:22] VERSION="7 (Core)"
[2025-10-13 21:26:22] ID="centos"
[2025-10-13 21:26:22] ID_LIKE="rhel fedora"
[2025-10-13 21:26:22] VERSION_ID="7"
[2025-10-13 21:26:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 21:26:22] ANSI_COLOR="0;31"
[2025-10-13 21:26:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 21:26:22] HOME_URL="https://www.centos.org/"
[2025-10-13 21:26:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 21:26:22] 
[2025-10-13 21:26:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 21:26:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 21:26:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 21:26:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 21:26:22] 
[2025-10-13 21:26:22] 2025-10-13 12:25:53,713 | INFO     | ***************************************
[2025-10-13 21:26:22] 2025-10-13 12:25:54,216 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-13 21:26:22] 2025-10-13 12:25:54,225 | INFO     | sufficient remaining disk space (84024492032 B)
[2025-10-13 21:26:22] 2025-10-13 12:25:54,225 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 21:26:22] 2025-10-13 12:25:54,226 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 21:26:22] 2025-10-13 12:25:54,226 | INFO     | update_server=False
[2025-10-13 21:26:22] 2025-10-13 12:25:54,226 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 21:26:22] 2025-10-13 12:25:54,226 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 21:26:22] 2025-10-13 12:25:54,226 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:26:22] 2025-10-13 12:25:54,226 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 21:26:22] 2025-10-13 12:25:54,226 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 21:26:22] 2025-10-13 12:25:54,226 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 21:26:22] 2025-10-13 12:25:54,619 | INFO     | all data control threads have been joined
[2025-10-13 21:26:22] 2025-10-13 12:25:54,642 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 21:26:22] 2025-10-13 12:25:54,642 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 21:26:22] 2025-10-13 12:25:54,642 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:26:22] 2025-10-13 12:25:54,642 | INFO     | will abort loop
[2025-10-13 21:26:22] 2025-10-13 12:25:54,954 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 21:26:22] 2025-10-13 12:25:55,159 | INFO     | all payload control threads have been joined
[2025-10-13 21:26:22] 2025-10-13 12:25:55,205 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 21:26:22] 2025-10-13 12:25:55,231 | INFO     | [job] retrieve thread has finished
[2025-10-13 21:26:22] 2025-10-13 12:25:55,231 | INFO     | [job] queue monitor thread has finished
[2025-10-13 21:26:22] 2025-10-13 12:25:55,298 | INFO     | all job control threads have been joined
[2025-10-13 21:26:22] 2025-10-13 12:25:55,454 | INFO     | [payload] failed_post thread has finished
[2025-10-13 21:26:22] 2025-10-13 12:25:55,624 | INFO     | [data] control thread has finished
[2025-10-13 21:26:22] 2025-10-13 12:25:55,647 | INFO     | [job] job monitor thread has finished
[2025-10-13 21:26:22] 2025-10-13 12:25:55,685 | INFO     | [job] validate thread has finished
[2025-10-13 21:26:22] 2025-10-13 12:25:55,775 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 21:26:22] 2025-10-13 12:25:55,858 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 21:26:22] 2025-10-13 12:25:55,893 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 21:26:22] 2025-10-13 12:25:56,164 | INFO     | [payload] control thread has finished
[2025-10-13 21:26:22] 2025-10-13 12:25:56,303 | INFO     | [job] control thread has finished
[2025-10-13 21:26:22] 2025-10-13 12:25:56,496 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 21:26:22] 2025-10-13 12:25:56,627 | INFO     | [data] copytool_in thread has finished
[2025-10-13 21:26:22] 2025-10-13 12:25:56,730 | INFO     | [payload] validate_post thread has finished
[2025-10-13 21:26:22] 2025-10-13 12:25:57,211 | INFO     | [data] copytool_out thread has finished
[2025-10-13 21:26:22] 2025-10-13 12:25:58,960 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 21:26:22] 2025-10-13 12:26:17,010 | INFO     | [monitor] cgroup control has ended
[2025-10-13 21:26:22] 2025-10-13 12:26:17,561 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140337490679616)>', '<ExcThread(monitor, started 140336781326080)>']
[2025-10-13 21:26:22] 2025-10-13 12:26:18,348 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 21:26:22] 2025-10-13 12:26:18,349 | INFO     | [monitor] control thread has ended
[2025-10-13 21:26:22] 2025-10-13 12:26:22,583 | INFO     | all workflow threads have been joined
[2025-10-13 21:26:22] 2025-10-13 12:26:22,583 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 21:26:22] 2025-10-13 12:26:22,583 | INFO     | traces error code: 0
[2025-10-13 21:26:22] 2025-10-13 12:26:22,583 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 21:26:22] 2025-10-13 12:26:22,646 [wrapper] ==== pilot stdout END ====
[2025-10-13 21:26:22] 2025-10-13 12:26:22,648 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 21:26:22] 2025-10-13 12:26:22,649 [wrapper] pilotpid: 2880818
[2025-10-13 21:26:22] 2025-10-13 12:26:22,651 [wrapper] Pilot exit status: 0
[2025-10-13 21:26:22] 2025-10-13 12:26:22,657 [wrapper] pandaids: 6840852512
[2025-10-13 21:26:22] 2025-10-13 12:26:22,675 [wrapper] cleanup supervisor_pilot 2923287 2880819
[2025-10-13 21:26:22] 2025-10-13 12:26:22,677 [wrapper] Test setup, not cleaning
[2025-10-13 21:26:22] 2025-10-13 12:26:22,678 [wrapper] apfmon messages muted
[2025-10-13 21:26:22] 2025-10-13 12:26:22,680 [wrapper] ==== wrapper stdout END ====
[2025-10-13 21:26:22] 2025-10-13 12:26:22,681 [wrapper] ==== wrapper stderr END ====
[2025-10-13 21:26:22]  *** Error codes and diagnostics ***
[2025-10-13 21:26:22]     "exeErrorCode": 0,
[2025-10-13 21:26:22]     "exeErrorDiag": "",
[2025-10-13 21:26:22]     "pilotErrorCode": 0,
[2025-10-13 21:26:22]     "pilotErrorDiag": "",
[2025-10-13 21:26:22]  *** Listing of results directory ***
[2025-10-13 21:26:22] total 414232
[2025-10-13 21:26:22] -rw-r--r--. 1 boinc boinc    557409 Oct 13 06:57 pilot3.tar.gz
[2025-10-13 21:26:22] -rw-r--r--. 1 boinc boinc      5112 Oct 13 07:41 queuedata.json
[2025-10-13 21:26:22] -rwx------. 1 boinc boinc     36292 Oct 13 07:42 runpilot2-wrapper.sh
[2025-10-13 21:26:22] -rw-r--r--. 1 boinc boinc       100 Oct 13 20:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 21:26:22] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 20:04 run_atlas
[2025-10-13 21:26:22] -rw-r--r--. 1 boinc boinc       105 Oct 13 20:04 job.xml
[2025-10-13 21:26:22] -rw-r--r--. 2 boinc boinc     15120 Oct 13 20:04 start_atlas.sh
[2025-10-13 21:26:22] drwxrwx--x. 2 boinc boinc        68 Oct 13 20:04 shared
[2025-10-13 21:26:22] -rw-r--r--. 2 boinc boinc    569684 Oct 13 20:04 input.tar.gz
[2025-10-13 21:26:22] -rw-r--r--. 1 boinc boinc      9465 Oct 13 20:04 init_data.xml
[2025-10-13 21:26:22] -rw-r--r--. 2 boinc boinc 220979871 Oct 13 20:04 EVNT.46676267._004625.pool.root.1
[2025-10-13 21:26:22] -rw-r--r--. 1 boinc boinc         0 Oct 13 20:04 boinc_lockfile
[2025-10-13 21:26:22] -rw-r--r--. 1 boinc boinc      2550 Oct 13 20:04 pandaJob.out
[2025-10-13 21:26:22] -rw-------. 1 boinc boinc    972497 Oct 13 20:05 agis_schedconf.cvmfs.json
[2025-10-13 21:26:22] -rw-------. 1 boinc boinc   1560580 Oct 13 20:05 agis_ddmendpoints.agis.ALL.json
[2025-10-13 21:26:22] drwx------. 5 boinc boinc      4096 Oct 13 20:05 pilot3
[2025-10-13 21:26:22] -rw-r--r--. 1 boinc boinc       529 Oct 13 21:24 boinc_task_state.xml
[2025-10-13 21:26:22] -rw-------. 1 boinc boinc 197272878 Oct 13 21:24 HITS.46676269._091341.pool.root.1
[2025-10-13 21:26:22] -rw-------. 1 boinc boinc      1015 Oct 13 21:24 memory_monitor_summary.json
[2025-10-13 21:26:22] -rw-------. 1 boinc boinc    296063 Oct 13 21:24 log.46676269._091341.job.log.tgz.1
[2025-10-13 21:26:22] -rw-------. 1 boinc boinc        95 Oct 13 21:25 pilot_heartbeat.json
[2025-10-13 21:26:22] -rw-------. 1 boinc boinc      7746 Oct 13 21:25 heartbeat.json
[2025-10-13 21:26:22] -rw-r--r--. 1 boinc boinc      8192 Oct 13 21:26 boinc_mmap_file
[2025-10-13 21:26:22] -rw-r--r--. 1 boinc boinc        27 Oct 13 21:26 wrapper_checkpoint.txt
[2025-10-13 21:26:22] -rw-------. 1 boinc boinc      4738 Oct 13 21:26 pilotlog.txt
[2025-10-13 21:26:22] -rw-------. 1 boinc boinc    713795 Oct 13 21:26 log.46676269._091341.job.log.1
[2025-10-13 21:26:22] -rw-------. 1 boinc boinc       357 Oct 13 21:26 output.list
[2025-10-13 21:26:22] -rw-r--r--. 1 boinc boinc       620 Oct 13 21:26 runtime_log
[2025-10-13 21:26:22] -rw-------. 1 boinc boinc   1034240 Oct 13 21:26 result.tar.gz
[2025-10-13 21:26:22] -rw-r--r--. 1 boinc boinc      8661 Oct 13 21:26 runtime_log.err
[2025-10-13 21:26:22] -rw-------. 1 boinc boinc       642 Oct 13 21:26 7GcNDmiwJS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmYCVMDml5ZuHo.diag
[2025-10-13 21:26:22] -rw-r--r--. 1 boinc boinc     21894 Oct 13 21:26 stderr.txt
[2025-10-13 21:26:22] HITS file was successfully produced:
[2025-10-13 21:26:22] -rw-------. 1 boinc boinc 197272878 Oct 13 21:24 shared/HITS.pool.root.1
[2025-10-13 21:26:22]  *** Contents of shared directory: ***
[2025-10-13 21:26:22] total 410044
[2025-10-13 21:26:22] -rw-r--r--. 2 boinc boinc     15120 Oct 13 20:04 start_atlas.sh
[2025-10-13 21:26:22] -rw-r--r--. 2 boinc boinc    569684 Oct 13 20:04 input.tar.gz
[2025-10-13 21:26:22] -rw-r--r--. 2 boinc boinc 220979871 Oct 13 20:04 ATLAS.root_0
[2025-10-13 21:26:22] -rw-------. 1 boinc boinc 197272878 Oct 13 21:24 HITS.pool.root.1
[2025-10-13 21:26:22] -rw-------. 1 boinc boinc   1034240 Oct 13 21:26 result.tar.gz
21:26:24 (2877044): run_atlas exited; CPU time 26264.502634
21:26:24 (2877044): called boinc_finish(0)

</stderr_txt>
]]>

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