Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:45:37 (3682519): wrapper (7.7.26015): starting
04:45:37 (3682519): wrapper: running run_atlas (--nthreads 4)
[2025-10-14 04:45:37] Arguments: --nthreads 4
[2025-10-14 04:45:37] Threads: 4
[2025-10-14 04:45:37] Checking for CVMFS
[2025-10-14 04:45:37] No cvmfs_config command found, will try listing directly
[2025-10-14 04:45:37] CVMFS is ok
[2025-10-14 04:45:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 04:45:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-14 04:45:37] Further information can be found at the LHC@home message board.
[2025-10-14 04:45:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 04:45:37] Checking for apptainer binary...
[2025-10-14 04:45:37] which: no apptainer in ((null))
[2025-10-14 04:45:37] apptainer is not installed, using version from CVMFS
[2025-10-14 04:45:37] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 04:45:37] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2025-10-14 04:45:37] apptainer works
[2025-10-14 04:45:37] Set ATHENA_PROC_NUMBER=4
[2025-10-14 04:45:37] Set ATHENA_CORE_NUMBER=4
[2025-10-14 04:45:37] Starting ATLAS job with PandaID=6840854011
[2025-10-14 04:45:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 07:58:17]  *** The last 200 lines of the pilot log: ***
[2025-10-14 07:58:18] 2025-10-14 05:53:09,177 | INFO     | time since job start (11242s) is within the limit (172800.0s)
[2025-10-14 07:58:18] 2025-10-14 05:53:09,669 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-14 07:58:18] 2025-10-14 05:53:09,681 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2654.903703125
[2025-10-14 07:58:18] 2025-10-14 05:53:09,695 | INFO     | using path: /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6840854011/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 07:58:18] 2025-10-14 05:53:09,696 | INFO     | extracted standard info from prmon json
[2025-10-14 07:58:18] 2025-10-14 05:53:09,696 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 07:58:18] 2025-10-14 05:53:09,696 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 07:58:18] 2025-10-14 05:53:09,697 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 07:58:18] 2025-10-14 05:53:09,697 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 07:58:18] 2025-10-14 05:53:09,701 | INFO     | fitting pss+swap vs Time
[2025-10-14 07:58:18] 2025-10-14 05:53:09,702 | INFO     | sum of square deviations: 1931608310.0
[2025-10-14 07:58:18] 2025-10-14 05:53:09,703 | INFO     | sum of deviations: 16513898894.0
[2025-10-14 07:58:18] 2025-10-14 05:53:09,704 | INFO     | mean x: 1760415554.5
[2025-10-14 07:58:18] 2025-10-14 05:53:09,704 | INFO     | mean y: 2331769.815217391
[2025-10-14 07:58:18] 2025-10-14 05:53:09,704 | INFO     | -- intersect: -15047988902.307976
[2025-10-14 07:58:18] 2025-10-14 05:53:09,704 | INFO     | intersect: -15047988902.307976
[2025-10-14 07:58:18] 2025-10-14 05:53:09,704 | INFO     | chi2: 1.3151959044234862
[2025-10-14 07:58:18] 2025-10-14 05:53:09,705 | INFO     | sum of square deviations: 1778377530.0
[2025-10-14 07:58:18] 2025-10-14 05:53:09,706 | INFO     | sum of deviations: 16062247025.000002
[2025-10-14 07:58:18] 2025-10-14 05:53:09,706 | INFO     | mean x: 1760415402.0
[2025-10-14 07:58:18] 2025-10-14 05:53:09,707 | INFO     | mean y: 2331320.3966480447
[2025-10-14 07:58:18] 2025-10-14 05:53:09,707 | INFO     | -- intersect: -15897682358.666582
[2025-10-14 07:58:18] 2025-10-14 05:53:09,707 | INFO     | intersect: -15897682358.666582
[2025-10-14 07:58:18] 2025-10-14 05:53:09,707 | INFO     | chi2: 1.3161593461335876
[2025-10-14 07:58:18] 2025-10-14 05:53:09,707 | INFO     | current chi2=1.3161593461335876 (change=-0.07325461605081217 %)
[2025-10-14 07:58:18] 2025-10-14 05:53:09,707 | INFO     | right removable region: 178
[2025-10-14 07:58:18] 2025-10-14 05:53:09,708 | INFO     | sum of square deviations: 1778377530.0
[2025-10-14 07:58:18] 2025-10-14 05:53:09,709 | INFO     | sum of deviations: -5645445080.0
[2025-10-14 07:58:18] 2025-10-14 05:53:09,709 | INFO     | mean x: 1760415707.0
[2025-10-14 07:58:18] 2025-10-14 05:53:09,709 | INFO     | mean y: 2353487.039106145
[2025-10-14 07:58:18] 2025-10-14 05:53:09,709 | INFO     | -- intersect: 5590778905.256054
[2025-10-14 07:58:18] 2025-10-14 05:53:09,709 | INFO     | intersect: 5590778905.256054
[2025-10-14 07:58:18] 2025-10-14 05:53:09,710 | INFO     | chi2: 0.03050538999164567
[2025-10-14 07:58:18] 2025-10-14 05:53:09,710 | INFO     | current chi2=0.03050538999164567 (change=97.68054402473085 %)
[2025-10-14 07:58:18] 2025-10-14 05:53:09,710 | INFO     | sum of square deviations: 1633472487.5
[2025-10-14 07:58:18] 2025-10-14 05:53:09,712 | INFO     | sum of deviations: -4891812223.0
[2025-10-14 07:58:18] 2025-10-14 05:53:09,712 | INFO     | mean x: 1760415859.5
[2025-10-14 07:58:18] 2025-10-14 05:53:09,712 | INFO     | mean y: 2352678.103448276
[2025-10-14 07:58:18] 2025-10-14 05:53:09,712 | INFO     | -- intersect: 5274326271.148216
[2025-10-14 07:58:18] 2025-10-14 05:53:09,712 | INFO     | intersect: 5274326271.148216
[2025-10-14 07:58:18] 2025-10-14 05:53:09,712 | INFO     | chi2: 0.028483283108693563
[2025-10-14 07:58:18] 2025-10-14 05:53:09,712 | INFO     | current chi2=0.028483283108693563 (change=6.628687204149459 %)
[2025-10-14 07:58:18] 2025-10-14 05:53:09,713 | INFO     | left removable region: 20
[2025-10-14 07:58:18] 2025-10-14 05:53:09,713 | INFO     | sum of square deviations: 1223016419.5
[2025-10-14 07:58:18] 2025-10-14 05:53:09,714 | INFO     | sum of deviations: 497547171.0000002
[2025-10-14 07:58:18] 2025-10-14 05:53:09,714 | INFO     | mean x: 1760415981.5
[2025-10-14 07:58:18] 2025-10-14 05:53:09,714 | INFO     | mean y: 2346474.164556962
[2025-10-14 07:58:18] 2025-10-14 05:53:09,714 | INFO     | -- intersect: -713825424.6040627
[2025-10-14 07:58:18] 2025-10-14 05:53:09,714 | INFO     | intersect: -713825424.6040627
[2025-10-14 07:58:18] 2025-10-14 05:53:09,715 | INFO     | chi2: 0.008348328219633949
[2025-10-14 07:58:18] 2025-10-14 05:53:09,715 | INFO     | -- intersect: -713825424.6040627
[2025-10-14 07:58:18] 2025-10-14 05:53:09,715 | INFO     | current memory leak: 0.41 B/s (using 158 data points, chi2=0.01)
[2025-10-14 07:58:18] 2025-10-14 05:53:09,716 | INFO     | could have reported an average CPU frequency of 2670 MHz (10 samples)
[2025-10-14 07:58:18] 2025-10-14 05:53:09,716 | INFO     | ..............................
[2025-10-14 07:58:18] 2025-10-14 05:53:09,716 | INFO     | . Timing measurements:
[2025-10-14 07:58:18] 2025-10-14 05:53:09,716 | INFO     | . get job = 0 s
[2025-10-14 07:58:18] 2025-10-14 05:53:09,716 | INFO     | . initial setup = 1 s
[2025-10-14 07:58:18] 2025-10-14 05:53:09,716 | INFO     | . payload setup = 5 s
[2025-10-14 07:58:18] 2025-10-14 05:53:09,717 | INFO     | . stage-in = 0 s
[2025-10-14 07:58:18] 2025-10-14 05:53:09,717 | INFO     | . payload execution = 11209 s
[2025-10-14 07:58:18] 2025-10-14 05:53:09,717 | INFO     | . stage-out = 1 s
[2025-10-14 07:58:18] 2025-10-14 05:53:09,717 | INFO     | . log creation = 0 s
[2025-10-14 07:58:18] 2025-10-14 05:53:09,717 | INFO     | ..............................
[2025-10-14 07:58:18] 2025-10-14 05:53:09,905 | INFO     | 
[2025-10-14 07:58:18] 2025-10-14 05:53:09,905 | INFO     | job summary report
[2025-10-14 07:58:18] 2025-10-14 05:53:09,905 | INFO     | --------------------------------------------------
[2025-10-14 07:58:18] 2025-10-14 05:53:09,906 | INFO     | PanDA job id: 6840854011
[2025-10-14 07:58:18] 2025-10-14 05:53:09,906 | INFO     | task id: 46676269
[2025-10-14 07:58:18] 2025-10-14 05:53:09,906 | INFO     | errors: (none)
[2025-10-14 07:58:18] 2025-10-14 05:53:09,906 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 07:58:18] 2025-10-14 05:53:09,906 | INFO     | pilot state: finished 
[2025-10-14 07:58:18] 2025-10-14 05:53:09,906 | INFO     | transexitcode: 0
[2025-10-14 07:58:18] 2025-10-14 05:53:09,906 | INFO     | exeerrorcode: 0
[2025-10-14 07:58:18] 2025-10-14 05:53:09,906 | INFO     | exeerrordiag: 
[2025-10-14 07:58:18] 2025-10-14 05:53:09,906 | INFO     | exitcode: 0
[2025-10-14 07:58:18] 2025-10-14 05:53:09,906 | INFO     | exitmsg: OK
[2025-10-14 07:58:18] 2025-10-14 05:53:09,906 | INFO     | cpuconsumptiontime: 42193 s
[2025-10-14 07:58:18] 2025-10-14 05:53:09,906 | INFO     | nevents: 400
[2025-10-14 07:58:18] 2025-10-14 05:53:09,907 | INFO     | neventsw: 0
[2025-10-14 07:58:18] 2025-10-14 05:53:09,907 | INFO     | pid: 3693246
[2025-10-14 07:58:18] 2025-10-14 05:53:09,907 | INFO     | pgrp: 3693246
[2025-10-14 07:58:18] 2025-10-14 05:53:09,907 | INFO     | corecount: 4
[2025-10-14 07:58:18] 2025-10-14 05:53:09,907 | INFO     | event service: False
[2025-10-14 07:58:18] 2025-10-14 05:53:09,907 | INFO     | sizes: {0: 2348697, 1: 2348896, 5: 2349158, 11: 2349214, 11219: 2378576, 11222: 2387780, 11227: 2387918}
[2025-10-14 07:58:18] 2025-10-14 05:53:09,907 | INFO     | --------------------------------------------------
[2025-10-14 07:58:18] 2025-10-14 05:53:09,907 | INFO     | 
[2025-10-14 07:58:18] 2025-10-14 05:53:09,907 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2025-10-14 07:58:18] 2025-10-14 05:53:09,929 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 07:58:18] 2025-10-14 05:53:09,929 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 07:58:18] 2025-10-14 05:53:09,929 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 07:58:18] 2025-10-14 05:53:09,929 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 07:58:18] 2025-10-14 05:53:09,930 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 07:58:18] 2025-10-14 05:53:09,930 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 07:58:18] 2025-10-14 05:53:09,930 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 07:58:18] 2025-10-14 05:53:09,930 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 07:58:18] 2025-10-14 05:53:09,930 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 07:58:18] 2025-10-14 05:53:09,930 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 07:58:18] 2025-10-14 05:53:09,930 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 07:58:18] 2025-10-14 05:53:09,930 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 07:58:18] 2025-10-14 05:53:09,930 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 07:58:18] 2025-10-14 05:53:09,930 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 07:58:18] 2025-10-14 05:53:09,930 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 07:58:18] 2025-10-14 05:53:09,930 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 07:58:18] 2025-10-14 05:53:09,931 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 07:58:18] 2025-10-14 05:53:09,931 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 07:58:18] 2025-10-14 05:53:09,931 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 07:58:18] 2025-10-14 05:53:09,931 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 07:58:18] 2025-10-14 05:53:09,931 | INFO     | job 6840854011 has completed (purged errors)
[2025-10-14 07:58:18] 2025-10-14 05:53:09,931 | INFO     | overall cleanup function is called
[2025-10-14 07:58:18] 2025-10-14 05:53:10,742 | INFO     | PID=3686306 has CPU usage=12.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-14 07:58:18] 2025-10-14 05:53:10,742 | INFO     | .. there are 6 such processes running
[2025-10-14 07:58:18] 2025-10-14 05:53:10,938 | INFO     | --- collectZombieJob: --- 10, [3693246]
[2025-10-14 07:58:18] 2025-10-14 05:53:10,938 | INFO     | zombie collector waiting for pid 3693246
[2025-10-14 07:58:18] 2025-10-14 05:53:10,938 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 07:58:18] 2025-10-14 05:53:10,939 | INFO     | collected zombie processes
[2025-10-14 07:58:18] 2025-10-14 05:53:10,939 | INFO     | will attempt to kill all subprocesses of pid=3693246
[2025-10-14 07:58:18] 2025-10-14 05:53:11,332 | INFO     | process IDs to be killed: [3693246] (in reverse order)
[2025-10-14 07:58:18] 2025-10-14 05:53:11,463 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 07:58:18] 2025-10-14 05:53:11,464 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 07:58:18] 2025-10-14 05:53:11,479 | INFO     | did not find any defunct processes belonging to 3693246
[2025-10-14 07:58:18] 2025-10-14 05:53:11,494 | INFO     | did not find any defunct processes belonging to 3693246
[2025-10-14 07:58:18] 2025-10-14 05:53:11,495 | INFO     | ready for new job
[2025-10-14 07:58:18] 2025-10-14 05:53:11,495 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 07:58:18] 2025-10-14 05:53:11,497 | INFO     | ***************************************
[2025-10-14 07:58:18] 2025-10-14 05:53:11,497 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 07:58:18] 2025-10-14 05:53:11,498 | INFO     | ***************************************
[2025-10-14 07:58:18] 2025-10-14 05:53:11,498 | INFO     | 
[2025-10-14 07:58:18] 2025-10-14 05:53:11,502 | INFO     | architecture information:
[2025-10-14 07:58:18] 2025-10-14 05:53:11,502 | INFO     | executing command: cat /etc/os-release
[2025-10-14 07:58:18] 2025-10-14 05:53:11,520 | INFO     | cat /etc/os-release:
[2025-10-14 07:58:18] NAME="CentOS Linux"
[2025-10-14 07:58:18] VERSION="7 (Core)"
[2025-10-14 07:58:18] ID="centos"
[2025-10-14 07:58:18] ID_LIKE="rhel fedora"
[2025-10-14 07:58:18] VERSION_ID="7"
[2025-10-14 07:58:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 07:58:18] ANSI_COLOR="0;31"
[2025-10-14 07:58:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 07:58:18] HOME_URL="https://www.centos.org/"
[2025-10-14 07:58:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 07:58:18] 
[2025-10-14 07:58:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 07:58:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 07:58:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 07:58:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 07:58:18] 
[2025-10-14 07:58:18] 2025-10-14 05:53:11,521 | INFO     | ***************************************
[2025-10-14 07:58:18] 2025-10-14 05:53:12,024 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2025-10-14 07:58:18] 2025-10-14 05:53:12,043 | INFO     | sufficient remaining disk space (679202521088 B)
[2025-10-14 07:58:18] 2025-10-14 05:53:12,043 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 07:58:18] 2025-10-14 05:53:12,044 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 07:58:18] 2025-10-14 05:53:12,044 | INFO     | update_server=False
[2025-10-14 07:58:18] 2025-10-14 05:53:12,044 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 07:58:18] 2025-10-14 05:53:12,044 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 07:58:18] 2025-10-14 05:53:12,044 | INFO     | aborting loop
[2025-10-14 07:58:18] 2025-10-14 05:53:12,334 | INFO     | all payload control threads have been joined
[2025-10-14 07:58:18] 2025-10-14 05:53:12,421 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 07:58:18] 2025-10-14 05:53:12,748 | INFO     | all data control threads have been joined
[2025-10-14 07:58:18] 2025-10-14 05:53:13,049 | INFO     | [job] retrieve thread has finished
[2025-10-14 07:58:18] 2025-10-14 05:53:13,050 | INFO     | [job] job monitor thread has finished
[2025-10-14 07:58:18] 2025-10-14 05:53:13,175 | INFO     | [payload] failed_post thread has finished
[2025-10-14 07:58:18] 2025-10-14 05:53:13,339 | INFO     | [payload] control thread has finished
[2025-10-14 07:58:18] 2025-10-14 05:53:13,422 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 07:58:18] 2025-10-14 05:53:13,464 | INFO     | all job control threads have been joined
[2025-10-14 07:58:18] 2025-10-14 05:53:13,561 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 07:58:18] 2025-10-14 05:53:13,753 | INFO     | [data] control thread has finished
[2025-10-14 07:58:18] 2025-10-14 05:53:13,852 | INFO     | [job] validate thread has finished
[2025-10-14 07:58:18] 2025-10-14 05:53:14,018 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 07:58:18] 2025-10-14 05:53:14,272 | INFO     | [payload] validate_post thread has finished
[2025-10-14 07:58:18] 2025-10-14 05:53:14,360 | INFO     | [data] copytool_in thread has finished
[2025-10-14 07:58:18] 2025-10-14 05:53:14,426 | INFO     | [data] copytool_out thread has finished
[2025-10-14 07:58:18] 2025-10-14 05:53:14,469 | INFO     | [job] control thread has finished
[2025-10-14 07:58:18] 2025-10-14 05:53:14,526 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 07:58:18] 2025-10-14 05:53:14,853 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 07:58:18] 2025-10-14 05:53:15,024 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 07:58:18] 2025-10-14 05:53:15,858 | INFO     | [job] queue monitor thread has finished
[2025-10-14 07:58:18] 2025-10-14 05:53:19,030 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 07:58:18] 2025-10-14 05:53:43,224 | INFO     | PID=3686306 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 07:58:18] 2025-10-14 05:53:43,224 | INFO     | .. there are 6 such processes running
[2025-10-14 07:58:18] 2025-10-14 05:53:43,225 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 07:58:18] 2025-10-14 05:53:43,225 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 07:58:18] 2025-10-14 05:53:43,225 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 07:58:18] 2025-10-14 05:54:05,391 | INFO     | [monitor] cgroup control has ended
[2025-10-14 07:58:18] 2025-10-14 05:54:05,509 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22418348001088)>', '<ExcThread(monitor, started 22418038953728)>']
[2025-10-14 07:58:18] 2025-10-14 05:54:06,339 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 07:58:18] 2025-10-14 05:54:06,339 | INFO     | [monitor] control thread has ended
[2025-10-14 07:58:18] 2025-10-14 05:54:10,534 | INFO     | all workflow threads have been joined
[2025-10-14 07:58:18] 2025-10-14 05:54:10,534 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 07:58:18] 2025-10-14 05:54:10,535 | INFO     | traces error code: 0
[2025-10-14 07:58:18] 2025-10-14 05:54:10,535 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 07:58:18] 2025-10-14 05:54:10,701 [wrapper] ==== pilot stdout END ====
[2025-10-14 07:58:18] 2025-10-14 05:54:10,705 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 07:58:18] 2025-10-14 05:54:10,708 [wrapper] pilotpid: 3686306
[2025-10-14 07:58:18] 2025-10-14 05:54:10,710 [wrapper] Pilot exit status: 0
[2025-10-14 07:58:18] 2025-10-14 05:54:10,722 [wrapper] pandaids: 6840854011
[2025-10-14 07:58:18] 2025-10-14 05:54:10,799 [wrapper] cleanup supervisor_pilot 3945885 3686307
[2025-10-14 07:58:18] 2025-10-14 05:54:10,803 [wrapper] Test setup, not cleaning
[2025-10-14 07:58:18] 2025-10-14 05:54:10,806 [wrapper] apfmon messages muted
[2025-10-14 07:58:18] 2025-10-14 05:54:10,809 [wrapper] ==== wrapper stdout END ====
[2025-10-14 07:58:18] 2025-10-14 05:54:10,812 [wrapper] ==== wrapper stderr END ====
[2025-10-14 07:58:18]  *** Error codes and diagnostics ***
[2025-10-14 07:58:18]     "exeErrorCode": 0,
[2025-10-14 07:58:18]     "exeErrorDiag": "",
[2025-10-14 07:58:18]     "pilotErrorCode": 0,
[2025-10-14 07:58:18]     "pilotErrorDiag": "",
[2025-10-14 07:58:18]  *** Listing of results directory ***
[2025-10-14 07:58:18] total 411888
[2025-10-14 07:58:18] -rw-r--r-- 1 boinc boinc    557409 Oct 13 00:49 pilot3.tar.gz
[2025-10-14 07:58:18] -rwx------ 1 boinc boinc     36292 Oct 13 00:50 runpilot2-wrapper.sh
[2025-10-14 07:58:18] -rw-r--r-- 1 boinc boinc      5112 Oct 13 00:50 queuedata.json
[2025-10-14 07:58:18] -rw-r--r-- 1 boinc boinc       100 Oct 14 04:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 07:58:18] -rwxr-xr-x 1 boinc boinc      7986 Oct 14 04:45 run_atlas
[2025-10-14 07:58:18] -rw-r--r-- 1 boinc boinc       105 Oct 14 04:45 job.xml
[2025-10-14 07:58:18] -rw-r--r-- 2 boinc boinc 221655716 Oct 14 04:45 EVNT.46676267._004634.pool.root.1
[2025-10-14 07:58:18] -rw-r--r-- 1 boinc boinc      6634 Oct 14 04:45 init_data.xml
[2025-10-14 07:58:18] -rw-r--r-- 2 boinc boinc     15120 Oct 14 04:45 start_atlas.sh
[2025-10-14 07:58:18] drwxrwx--x 2 boinc boinc      4096 Oct 14 04:45 shared
[2025-10-14 07:58:18] -rw-r--r-- 2 boinc boinc    569677 Oct 14 04:45 input.tar.gz
[2025-10-14 07:58:18] -rw-r--r-- 1 boinc boinc         0 Oct 14 04:45 boinc_lockfile
[2025-10-14 07:58:18] -rw-r--r-- 1 boinc boinc      2550 Oct 14 04:45 pandaJob.out
[2025-10-14 07:58:18] -rw------- 1 boinc boinc    972807 Oct 14 04:45 agis_schedconf.cvmfs.json
[2025-10-14 07:58:18] drwx------ 5 boinc boinc      4096 Oct 14 04:45 pilot3
[2025-10-14 07:58:18] -rw-r--r-- 1 boinc boinc       527 Oct 14 07:52 boinc_task_state.xml
[2025-10-14 07:58:18] -rw------- 1 boinc boinc 192261576 Oct 14 07:52 HITS.46676269._091581.pool.root.1
[2025-10-14 07:58:18] -rw------- 1 boinc boinc        95 Oct 14 07:52 pilot_heartbeat.json
[2025-10-14 07:58:18] -rw------- 1 boinc boinc      1035 Oct 14 07:52 memory_monitor_summary.json
[2025-10-14 07:58:18] -rw------- 1 boinc boinc   1560580 Oct 14 07:53 agis_ddmendpoints.agis.ALL.json
[2025-10-14 07:58:18] -rw------- 1 boinc boinc    375821 Oct 14 07:53 log.46676269._091581.job.log.tgz.1
[2025-10-14 07:58:18] -rw------- 1 boinc boinc      7831 Oct 14 07:53 heartbeat.json
[2025-10-14 07:58:18] -rw------- 1 boinc boinc      4833 Oct 14 07:54 pilotlog.txt
[2025-10-14 07:58:18] -rw------- 1 boinc boinc   1598222 Oct 14 07:54 log.46676269._091581.job.log.1
[2025-10-14 07:58:18] -rw------- 1 boinc boinc       357 Oct 14 07:54 output.list
[2025-10-14 07:58:18] -rw-r--r-- 1 boinc boinc       620 Oct 14 07:54 runtime_log
[2025-10-14 07:58:18] -rw------- 1 boinc boinc   1996800 Oct 14 07:54 result.tar.gz
[2025-10-14 07:58:18] -rw-r--r-- 1 boinc boinc      9070 Oct 14 07:54 runtime_log.err
[2025-10-14 07:58:18] -rw------- 1 boinc boinc       665 Oct 14 07:54 XUXLDmr4JS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmvDVMDmrhkSLo.diag
[2025-10-14 07:58:18] -rw-r--r-- 1 boinc boinc        26 Oct 14 07:58 wrapper_checkpoint.txt
[2025-10-14 07:58:18] -rw-r--r-- 1 boinc boinc      8192 Oct 14 07:58 boinc_mmap_file
[2025-10-14 07:58:18] -rw-r--r-- 1 boinc boinc     20971 Oct 14 07:58 stderr.txt
[2025-10-14 07:58:18] HITS file was successfully produced:
[2025-10-14 07:58:18] -rw------- 1 boinc boinc 192261576 Oct 14 07:52 shared/HITS.pool.root.1
[2025-10-14 07:58:18]  *** Contents of shared directory: ***
[2025-10-14 07:58:18] total 406756
[2025-10-14 07:58:18] -rw-r--r-- 2 boinc boinc 221655716 Oct 14 04:45 ATLAS.root_0
[2025-10-14 07:58:18] -rw-r--r-- 2 boinc boinc     15120 Oct 14 04:45 start_atlas.sh
[2025-10-14 07:58:18] -rw-r--r-- 2 boinc boinc    569677 Oct 14 04:45 input.tar.gz
[2025-10-14 07:58:18] -rw------- 1 boinc boinc 192261576 Oct 14 07:52 HITS.pool.root.1
[2025-10-14 07:58:18] -rw------- 1 boinc boinc   1996800 Oct 14 07:54 result.tar.gz
07:58:20 (3682519): run_atlas exited; CPU time 42641.564350
07:58:20 (3682519): called boinc_finish(0)

</stderr_txt>
]]>

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