Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:17 (1954676): wrapper (7.7.26015): starting
00:02:17 (1954676): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 00:02:17] Arguments: --nthreads 8
[2025-10-13 00:02:17] Threads: 8
[2025-10-13 00:02:17] Checking for CVMFS
[2025-10-13 00:02:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:02:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:02:18] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:02:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:02:19] 2.13.2.0 1395644 130178 457172 151647 0 594 20161767 32935936 23484 16776704 0 169867893 99.566 195963428 28007 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:02:19] CVMFS is ok
[2025-10-13 00:02:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:02:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:02:19] Further information can be found at the LHC@home message board.
[2025-10-13 00:02:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:02:19] Checking for apptainer binary...
[2025-10-13 00:02:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:02:19] Running /usr/bin/apptainer --version
[2025-10-13 00:02:19] apptainer version 1.4.3-1.el9
[2025-10-13 00:02:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:02:20] c6-6-39-2.aglt2.org
[2025-10-13 00:02:20] apptainer works
[2025-10-13 00:02:20] Set ATHENA_PROC_NUMBER=8
[2025-10-13 00:02:20] Set ATHENA_CORE_NUMBER=8
[2025-10-13 00:02:20] Starting ATLAS job with PandaID=6840854000
[2025-10-13 00:02:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:31:21]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:31:21] 2025-10-13 08:56:57,927 | INFO     | sum of square deviations: 6880013023.138845
[2025-10-13 05:31:21] 2025-10-13 08:56:57,929 | INFO     | sum of deviations: 113446315152.7438
[2025-10-13 05:31:21] 2025-10-13 08:56:57,929 | INFO     | mean x: 1760336907.1672597
[2025-10-13 05:31:21] 2025-10-13 08:56:57,929 | INFO     | mean y: 2057050.537366548
[2025-10-13 05:31:21] 2025-10-13 08:56:57,929 | INFO     | -- intersect: -29024593752.863743
[2025-10-13 05:31:21] 2025-10-13 08:56:57,929 | INFO     | intersect: -29024593752.863743
[2025-10-13 05:31:21] 2025-10-13 08:56:57,930 | INFO     | chi2: 3.1640338958901766
[2025-10-13 05:31:21] 2025-10-13 08:56:57,930 | INFO     | current chi2=3.1640338958901766 (change=0.16492108114641085 %)
[2025-10-13 05:31:21] 2025-10-13 08:56:57,930 | INFO     | right removable region: 280
[2025-10-13 05:31:21] 2025-10-13 08:56:57,930 | INFO     | sum of square deviations: 6879829533.80073
[2025-10-13 05:31:21] 2025-10-13 08:56:57,933 | INFO     | sum of deviations: 56327724130.636986
[2025-10-13 05:31:21] 2025-10-13 08:56:57,933 | INFO     | mean x: 1760337212.1708186
[2025-10-13 05:31:21] 2025-10-13 08:56:57,933 | INFO     | mean y: 2081531.8825622776
[2025-10-13 05:31:21] 2025-10-13 08:56:57,934 | INFO     | -- intersect: -14410454182.396147
[2025-10-13 05:31:21] 2025-10-13 08:56:57,934 | INFO     | intersect: -14410454182.396147
[2025-10-13 05:31:21] 2025-10-13 08:56:57,939 | INFO     | chi2: 0.7054874176634783
[2025-10-13 05:31:21] 2025-10-13 08:56:57,939 | INFO     | current chi2=0.7054874176634783 (change=77.73968473909918 %)
[2025-10-13 05:31:21] 2025-10-13 08:56:57,939 | INFO     | sum of square deviations: 6518959626.822472
[2025-10-13 05:31:21] 2025-10-13 08:56:57,942 | INFO     | sum of deviations: 30181271088.938396
[2025-10-13 05:31:21] 2025-10-13 08:56:57,942 | INFO     | mean x: 1760337364.692029
[2025-10-13 05:31:21] 2025-10-13 08:56:57,942 | INFO     | mean y: 2092554.1992753623
[2025-10-13 05:31:21] 2025-10-13 08:56:57,942 | INFO     | -- intersect: -8147861158.223739
[2025-10-13 05:31:21] 2025-10-13 08:56:57,942 | INFO     | intersect: -8147861158.223739
[2025-10-13 05:31:21] 2025-10-13 08:56:57,943 | INFO     | chi2: 0.27737414631299784
[2025-10-13 05:31:21] 2025-10-13 08:56:57,943 | INFO     | current chi2=0.27737414631299784 (change=60.68333192509085 %)
[2025-10-13 05:31:21] 2025-10-13 08:56:57,943 | INFO     | sum of square deviations: 6170943763.011057
[2025-10-13 05:31:21] 2025-10-13 08:56:57,945 | INFO     | sum of deviations: 15454835573.841326
[2025-10-13 05:31:21] 2025-10-13 08:56:57,945 | INFO     | mean x: 1760337517.2103322
[2025-10-13 05:31:21] 2025-10-13 08:56:57,945 | INFO     | mean y: 2098990.985239852
[2025-10-13 05:31:21] 2025-10-13 08:56:57,945 | INFO     | -- intersect: -4406582716.020783
[2025-10-13 05:31:21] 2025-10-13 08:56:57,945 | INFO     | intersect: -4406582716.020783
[2025-10-13 05:31:21] 2025-10-13 08:56:57,946 | INFO     | chi2: 0.13372448601483308
[2025-10-13 05:31:21] 2025-10-13 08:56:57,946 | INFO     | current chi2=0.13372448601483308 (change=51.78913110959732 %)
[2025-10-13 05:31:21] 2025-10-13 08:56:57,946 | INFO     | sum of square deviations: 5835549562.96615
[2025-10-13 05:31:21] 2025-10-13 08:56:57,948 | INFO     | sum of deviations: 12739784270.259401
[2025-10-13 05:31:21] 2025-10-13 08:56:57,948 | INFO     | mean x: 1760337669.725564
[2025-10-13 05:31:21] 2025-10-13 08:56:57,948 | INFO     | mean y: 2100223.7706766916
[2025-10-13 05:31:21] 2025-10-13 08:56:57,948 | INFO     | -- intersect: -3840952073.7263494
[2025-10-13 05:31:21] 2025-10-13 08:56:57,948 | INFO     | intersect: -3840952073.7263494
[2025-10-13 05:31:21] 2025-10-13 08:56:57,948 | INFO     | chi2: 0.1307575793490156
[2025-10-13 05:31:21] 2025-10-13 08:56:57,948 | INFO     | current chi2=0.1307575793490156 (change=2.2186712054278366 %)
[2025-10-13 05:31:21] 2025-10-13 08:56:57,948 | INFO     | left removable region: 40
[2025-10-13 05:31:21] 2025-10-13 08:56:57,949 | INFO     | sum of square deviations: 4286302539.583343
[2025-10-13 05:31:21] 2025-10-13 08:56:57,950 | INFO     | sum of deviations: 8665753840.791664
[2025-10-13 05:31:21] 2025-10-13 08:56:57,950 | INFO     | mean x: 1760338096.7083333
[2025-10-13 05:31:21] 2025-10-13 08:56:57,950 | INFO     | mean y: 2102494.0541666667
[2025-10-13 05:31:21] 2025-10-13 08:56:57,950 | INFO     | -- intersect: -3556828888.3593993
[2025-10-13 05:31:21] 2025-10-13 08:56:57,950 | INFO     | intersect: -3556828888.3593993
[2025-10-13 05:31:21] 2025-10-13 08:56:57,951 | INFO     | chi2: 0.11980591974926895
[2025-10-13 05:31:21] 2025-10-13 08:56:57,951 | INFO     | -- intersect: -3556828888.3593993
[2025-10-13 05:31:21] 2025-10-13 08:56:57,951 | INFO     | current memory leak: 2.02 B/s (using 240 data points, chi2=0.12)
[2025-10-13 05:31:21] 2025-10-13 08:56:57,952 | INFO     | could have reported an average CPU frequency of 2849 MHz (13 samples)
[2025-10-13 05:31:21] 2025-10-13 08:56:57,952 | INFO     | ..............................
[2025-10-13 05:31:21] 2025-10-13 08:56:57,952 | INFO     | . Timing measurements:
[2025-10-13 05:31:21] 2025-10-13 08:56:57,952 | INFO     | . get job = 0 s
[2025-10-13 05:31:21] 2025-10-13 08:56:57,952 | INFO     | . initial setup = 4 s
[2025-10-13 05:31:21] 2025-10-13 08:56:57,952 | INFO     | . payload setup = 47 s
[2025-10-13 05:31:21] 2025-10-13 08:56:57,952 | INFO     | . stage-in = 0 s
[2025-10-13 05:31:21] 2025-10-13 08:56:57,952 | INFO     | . payload execution = 17476 s
[2025-10-13 05:31:21] 2025-10-13 08:56:57,953 | INFO     | . stage-out = 2 s
[2025-10-13 05:31:21] 2025-10-13 08:56:57,953 | INFO     | . log creation = 0 s
[2025-10-13 05:31:21] 2025-10-13 08:56:57,953 | INFO     | ..............................
[2025-10-13 05:31:21] 2025-10-13 08:56:58,032 | INFO     | 
[2025-10-13 05:31:21] 2025-10-13 08:56:58,032 | INFO     | job summary report
[2025-10-13 05:31:21] 2025-10-13 08:56:58,032 | INFO     | --------------------------------------------------
[2025-10-13 05:31:21] 2025-10-13 08:56:58,032 | INFO     | PanDA job id: 6840854000
[2025-10-13 05:31:21] 2025-10-13 08:56:58,032 | INFO     | task id: 46676269
[2025-10-13 05:31:21] 2025-10-13 08:56:58,032 | INFO     | errors: (none)
[2025-10-13 05:31:21] 2025-10-13 08:56:58,032 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:31:21] 2025-10-13 08:56:58,032 | INFO     | pilot state: finished 
[2025-10-13 05:31:21] 2025-10-13 08:56:58,032 | INFO     | transexitcode: 0
[2025-10-13 05:31:21] 2025-10-13 08:56:58,033 | INFO     | exeerrorcode: 0
[2025-10-13 05:31:21] 2025-10-13 08:56:58,034 | INFO     | exeerrordiag: 
[2025-10-13 05:31:21] 2025-10-13 08:56:58,034 | INFO     | exitcode: 0
[2025-10-13 05:31:21] 2025-10-13 08:56:58,034 | INFO     | exitmsg: OK
[2025-10-13 05:31:21] 2025-10-13 08:56:58,034 | INFO     | cpuconsumptiontime: 42728 s
[2025-10-13 05:31:21] 2025-10-13 08:56:58,034 | INFO     | nevents: 400
[2025-10-13 05:31:21] 2025-10-13 08:56:58,034 | INFO     | neventsw: 0
[2025-10-13 05:31:21] 2025-10-13 08:56:58,034 | INFO     | pid: 1994400
[2025-10-13 05:31:21] 2025-10-13 08:56:58,034 | INFO     | pgrp: 1994400
[2025-10-13 05:31:21] 2025-10-13 08:56:58,034 | INFO     | corecount: 8
[2025-10-13 05:31:21] 2025-10-13 08:56:58,034 | INFO     | event service: False
[2025-10-13 05:31:21] 2025-10-13 08:56:58,034 | INFO     | sizes: {0: 2348630, 1: 2348885, 2: 2348913, 13: 2348913, 24: 2348969, 35: 2348997, 39: 2349415, 45: 2349443, 17527: 2381490, 17530: 2390544, 17535: 2390682}
[2025-10-13 05:31:21] 2025-10-13 08:56:58,034 | INFO     | --------------------------------------------------
[2025-10-13 05:31:21] 2025-10-13 08:56:58,034 | INFO     | 
[2025-10-13 05:31:21] 2025-10-13 08:56:58,035 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-13 05:31:21] 2025-10-13 08:56:58,053 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:31:21] 2025-10-13 08:56:58,054 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:31:21] 2025-10-13 08:56:58,054 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:31:21] 2025-10-13 08:56:58,054 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:31:21] 2025-10-13 08:56:58,054 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:31:21] 2025-10-13 08:56:58,054 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:31:21] 2025-10-13 08:56:58,054 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:31:21] 2025-10-13 08:56:58,054 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:31:21] 2025-10-13 08:56:58,054 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:31:21] 2025-10-13 08:56:58,054 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:31:21] 2025-10-13 08:56:58,054 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:31:21] 2025-10-13 08:56:58,055 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:31:21] 2025-10-13 08:56:58,055 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:31:21] 2025-10-13 08:56:58,055 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:31:21] 2025-10-13 08:56:58,055 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:31:21] 2025-10-13 08:56:58,055 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:31:21] 2025-10-13 08:56:58,055 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:31:21] 2025-10-13 08:56:58,055 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:31:21] 2025-10-13 08:56:58,055 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:31:21] 2025-10-13 08:56:58,055 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:31:21] 2025-10-13 08:56:58,055 | INFO     | job 6840854000 has completed (purged errors)
[2025-10-13 05:31:21] 2025-10-13 08:56:58,055 | INFO     | overall cleanup function is called
[2025-10-13 05:31:21] 2025-10-13 08:56:59,064 | INFO     | --- collectZombieJob: --- 10, [1994400]
[2025-10-13 05:31:21] 2025-10-13 08:56:59,064 | INFO     | zombie collector waiting for pid 1994400
[2025-10-13 05:31:21] 2025-10-13 08:56:59,064 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:31:21] 2025-10-13 08:56:59,064 | INFO     | collected zombie processes
[2025-10-13 05:31:21] 2025-10-13 08:56:59,064 | INFO     | will attempt to kill all subprocesses of pid=1994400
[2025-10-13 05:31:21] 2025-10-13 08:56:59,413 | INFO     | process IDs to be killed: [1994400] (in reverse order)
[2025-10-13 05:31:21] 2025-10-13 08:56:59,541 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:31:21] 2025-10-13 08:56:59,542 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:31:21] 2025-10-13 08:56:59,556 | INFO     | did not find any defunct processes belonging to 1994400
[2025-10-13 05:31:21] 2025-10-13 08:56:59,570 | INFO     | did not find any defunct processes belonging to 1994400
[2025-10-13 05:31:21] 2025-10-13 08:56:59,571 | INFO     | ready for new job
[2025-10-13 05:31:21] 2025-10-13 08:56:59,571 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:31:21] 2025-10-13 08:56:59,573 | INFO     | ***************************************
[2025-10-13 05:31:21] 2025-10-13 08:56:59,573 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:31:21] 2025-10-13 08:56:59,574 | INFO     | ***************************************
[2025-10-13 05:31:21] 2025-10-13 08:56:59,574 | INFO     | 
[2025-10-13 05:31:21] 2025-10-13 08:56:59,576 | INFO     | architecture information:
[2025-10-13 05:31:21] 2025-10-13 08:56:59,577 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:31:21] 2025-10-13 08:56:59,595 | INFO     | cat /etc/os-release:
[2025-10-13 05:31:21] NAME="CentOS Linux"
[2025-10-13 05:31:21] VERSION="7 (Core)"
[2025-10-13 05:31:21] ID="centos"
[2025-10-13 05:31:21] ID_LIKE="rhel fedora"
[2025-10-13 05:31:21] VERSION_ID="7"
[2025-10-13 05:31:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:31:21] ANSI_COLOR="0;31"
[2025-10-13 05:31:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:31:21] HOME_URL="https://www.centos.org/"
[2025-10-13 05:31:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:31:21] 
[2025-10-13 05:31:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:31:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:31:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:31:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:31:21] 
[2025-10-13 05:31:21] 2025-10-13 08:56:59,595 | INFO     | ***************************************
[2025-10-13 05:31:21] 2025-10-13 08:57:00,098 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-13 05:31:21] 2025-10-13 08:57:00,117 | INFO     | sufficient remaining disk space (72533147648 B)
[2025-10-13 05:31:21] 2025-10-13 08:57:00,117 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:31:21] 2025-10-13 08:57:00,117 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:31:21] 2025-10-13 08:57:00,117 | INFO     | update_server=False
[2025-10-13 05:31:21] 2025-10-13 08:57:00,118 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:31:21] 2025-10-13 08:57:00,422 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 05:31:21] 2025-10-13 08:57:00,423 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 05:31:21] 2025-10-13 08:57:00,423 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:31:21] 2025-10-13 08:57:00,423 | INFO     | will abort loop
[2025-10-13 05:31:21] 2025-10-13 08:57:00,466 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:31:21] 2025-10-13 08:57:01,064 | INFO     | all data control threads have been joined
[2025-10-13 05:31:21] 2025-10-13 08:57:01,123 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:31:21] 2025-10-13 08:57:01,277 | INFO     | all payload control threads have been joined
[2025-10-13 05:31:21] 2025-10-13 08:57:01,330 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:31:21] 2025-10-13 08:57:01,428 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:31:21] 2025-10-13 08:57:01,758 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:31:21] 2025-10-13 08:57:01,777 | INFO     | all job control threads have been joined
[2025-10-13 05:31:21] 2025-10-13 08:57:02,070 | INFO     | [data] control thread has finished
[2025-10-13 05:31:21] 2025-10-13 08:57:02,076 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:31:21] 2025-10-13 08:57:02,186 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:31:21] 2025-10-13 08:57:02,256 | INFO     | [job] validate thread has finished
[2025-10-13 05:31:21] 2025-10-13 08:57:02,282 | INFO     | [payload] control thread has finished
[2025-10-13 05:31:21] 2025-10-13 08:57:02,291 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:31:21] 2025-10-13 08:57:02,474 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:31:21] 2025-10-13 08:57:02,515 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:31:21] 2025-10-13 08:57:02,783 | INFO     | [job] control thread has finished
[2025-10-13 05:31:21] 2025-10-13 08:57:03,059 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:31:21] 2025-10-13 08:57:03,303 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:31:21] 2025-10-13 08:57:04,065 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:31:21] 2025-10-13 08:57:07,315 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:31:21] 2025-10-13 08:57:10,224 | INFO     | job.realtimelogging is not enabled
[2025-10-13 05:31:21] 2025-10-13 08:57:11,233 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:31:21] 2025-10-13 08:57:31,165 | INFO     | PID=1965248 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 05:31:21] 2025-10-13 08:57:31,166 | INFO     | .. there are 31 such processes running
[2025-10-13 05:31:21] 2025-10-13 08:57:31,166 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:31:21] 2025-10-13 08:57:31,167 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:31:21] 2025-10-13 08:57:31,167 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:31:21] 2025-10-13 08:57:55,154 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:31:21] 2025-10-13 08:57:56,381 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139755448407872)>', '<ExcThread(monitor, started 139754880366336)>']
[2025-10-13 05:31:21] 2025-10-13 08:57:57,344 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:31:21] 2025-10-13 08:57:57,345 | INFO     | [monitor] control thread has ended
[2025-10-13 05:31:21] 2025-10-13 08:58:01,407 | INFO     | all workflow threads have been joined
[2025-10-13 05:31:21] 2025-10-13 08:58:01,407 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:31:21] 2025-10-13 08:58:01,408 | INFO     | traces error code: 0
[2025-10-13 05:31:21] 2025-10-13 08:58:01,408 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:31:21] 2025-10-13 08:58:01,578 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:31:21] 2025-10-13 08:58:01,581 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:31:21] 2025-10-13 08:58:01,585 [wrapper] pilotpid: 1965248
[2025-10-13 05:31:21] 2025-10-13 08:58:01,590 [wrapper] Pilot exit status: 0
[2025-10-13 05:31:21] 2025-10-13 08:58:01,605 [wrapper] pandaids: 6840854000
[2025-10-13 05:31:21] 2025-10-13 08:58:01,678 [wrapper] cleanup supervisor_pilot 2944843 1965250
[2025-10-13 05:31:21] 2025-10-13 08:58:01,682 [wrapper] Test setup, not cleaning
[2025-10-13 05:31:21] 2025-10-13 08:58:01,685 [wrapper] apfmon messages muted
[2025-10-13 05:31:21] 2025-10-13 08:58:01,692 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:31:21] 2025-10-13 08:58:01,695 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:31:21]  *** Error codes and diagnostics ***
[2025-10-13 05:31:21]     "exeErrorCode": 0,
[2025-10-13 05:31:21]     "exeErrorDiag": "",
[2025-10-13 05:31:21]     "pilotErrorCode": 0,
[2025-10-13 05:31:21]     "pilotErrorDiag": "",
[2025-10-13 05:31:21]  *** Listing of results directory ***
[2025-10-13 05:31:21] total 422216
[2025-10-13 05:31:21] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 18:49 pilot3.tar.gz
[2025-10-13 05:31:21] -rwx------. 1 boincer umatlas     36292 Oct 12 18:50 runpilot2-wrapper.sh
[2025-10-13 05:31:21] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 18:50 queuedata.json
[2025-10-13 05:31:21] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:31:21] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:02 run_atlas
[2025-10-13 05:31:21] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:02 job.xml
[2025-10-13 05:31:21] -rw-r--r--. 2 boincer umatlas 221655716 Oct 13 00:02 EVNT.46676267._004634.pool.root.1
[2025-10-13 05:31:21] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:02 start_atlas.sh
[2025-10-13 05:31:21] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:02 shared
[2025-10-13 05:31:21] -rw-r--r--. 2 boincer umatlas    569674 Oct 13 00:02 input.tar.gz
[2025-10-13 05:31:21] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:02 boinc_lockfile
[2025-10-13 05:31:21] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:02 pandaJob.out
[2025-10-13 05:31:21] -rw-------. 1 boincer umatlas    974373 Oct 13 00:03 agis_schedconf.cvmfs.json
[2025-10-13 05:31:21] drwx------. 5 boincer umatlas      4096 Oct 13 00:03 pilot3
[2025-10-13 05:31:21] -rw-------. 1 boincer umatlas 201357533 Oct 13 04:56 HITS.46676269._091570.pool.root.1
[2025-10-13 05:31:21] -rw-r--r--. 1 boincer umatlas       530 Oct 13 04:56 boinc_task_state.xml
[2025-10-13 05:31:21] -rw-------. 1 boincer umatlas      1043 Oct 13 04:56 memory_monitor_summary.json
[2025-10-13 05:31:21] -rw-------. 1 boincer umatlas   1560580 Oct 13 04:56 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:31:21] -rw-------. 1 boincer umatlas    497549 Oct 13 04:56 log.46676269._091570.job.log.tgz.1
[2025-10-13 05:31:21] -rw-------. 1 boincer umatlas      7828 Oct 13 04:56 heartbeat.json
[2025-10-13 05:31:21] -rw-------. 1 boincer umatlas        95 Oct 13 04:57 pilot_heartbeat.json
[2025-10-13 05:31:21] -rw-------. 1 boincer umatlas      5082 Oct 13 04:58 pilotlog.txt
[2025-10-13 05:31:21] -rw-------. 1 boincer umatlas   2217120 Oct 13 04:58 log.46676269._091570.job.log.1
[2025-10-13 05:31:21] -rw-------. 1 boincer umatlas       357 Oct 13 04:58 output.list
[2025-10-13 05:31:21] -rw-r--r--. 1 boincer umatlas       620 Oct 13 04:58 runtime_log
[2025-10-13 05:31:21] -rw-------. 1 boincer umatlas   2734080 Oct 13 04:58 result.tar.gz
[2025-10-13 05:31:21] -rw-r--r--. 1 boincer umatlas      8709 Oct 13 04:58 runtime_log.err
[2025-10-13 05:31:21] -rw-------. 1 boincer umatlas       658 Oct 13 04:58 KSELDmr4JS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmkDVMDmRKAYVm.diag
[2025-10-13 05:31:21] -rw-r--r--. 1 boincer umatlas      6840 Oct 13 05:28 init_data.xml
[2025-10-13 05:31:21] -rw-r--r--. 1 boincer umatlas        27 Oct 13 05:31 wrapper_checkpoint.txt
[2025-10-13 05:31:21] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 05:31 boinc_mmap_file
[2025-10-13 05:31:21] -rw-r--r--. 1 boincer umatlas     21097 Oct 13 05:31 stderr.txt
[2025-10-13 05:31:21] HITS file was successfully produced:
[2025-10-13 05:31:21] -rw-------. 1 boincer umatlas 201357533 Oct 13 04:56 shared/HITS.pool.root.1
[2025-10-13 05:31:21]  *** Contents of shared directory: ***
[2025-10-13 05:31:21] total 416360
[2025-10-13 05:31:21] -rw-r--r--. 2 boincer umatlas 221655716 Oct 13 00:02 ATLAS.root_0
[2025-10-13 05:31:21] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:02 start_atlas.sh
[2025-10-13 05:31:21] -rw-r--r--. 2 boincer umatlas    569674 Oct 13 00:02 input.tar.gz
[2025-10-13 05:31:21] -rw-------. 1 boincer umatlas 201357533 Oct 13 04:56 HITS.pool.root.1
[2025-10-13 05:31:21] -rw-------. 1 boincer umatlas   2734080 Oct 13 04:58 result.tar.gz
05:31:23 (1954676): run_atlas exited; CPU time 43250.552958
05:31:23 (1954676): called boinc_finish(0)

</stderr_txt>
]]>

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