Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:58 (2834323): wrapper (7.7.26015): starting
00:02:58 (2834323): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 00:02:58] Arguments: --nthreads 12
[2025-10-13 00:02:58] Threads: 12
[2025-10-13 00:02:58] Checking for CVMFS
[2025-10-13 00:02:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:02:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:02:59] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:03:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:03:01] 2.13.2.0 136315 23695 260788 151647 0 793 30013316 40960000 24473 16776704 0 60555094 99.705 51651861 32008 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:03:01] CVMFS is ok
[2025-10-13 00:03:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:03:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:03:01] Further information can be found at the LHC@home message board.
[2025-10-13 00:03:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:03:01] Checking for apptainer binary...
[2025-10-13 00:03:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:03:01] Running /usr/bin/apptainer --version
[2025-10-13 00:03:01] apptainer version 1.4.3-1.el9
[2025-10-13 00:03:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:03:02] c6-8-12-2.aglt2.org
[2025-10-13 00:03:02] apptainer works
[2025-10-13 00:03:02] Set ATHENA_PROC_NUMBER=12
[2025-10-13 00:03:02] Set ATHENA_CORE_NUMBER=12
[2025-10-13 00:03:02] Starting ATLAS job with PandaID=6840853924
[2025-10-13 00:03:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:49:57]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:49:57] 2025-10-13 11:48:51,319 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:49:57] 2025-10-13 11:48:51,320 | INFO     | sum of square deviations: 28823658248.057392
[2025-10-13 07:49:57] 2025-10-13 11:48:51,328 | INFO     | sum of deviations: 438243592302.33295
[2025-10-13 07:49:57] 2025-10-13 11:48:51,328 | INFO     | mean x: 1760342316.392936
[2025-10-13 07:49:57] 2025-10-13 11:48:51,329 | INFO     | mean y: 2612129.6666666665
[2025-10-13 07:49:57] 2025-10-13 11:48:51,329 | INFO     | -- intersect: -26762163312.043396
[2025-10-13 07:49:57] 2025-10-13 11:48:51,329 | INFO     | intersect: -26762163312.043396
[2025-10-13 07:49:57] 2025-10-13 11:48:51,329 | INFO     | chi2: 6.709254846024788
[2025-10-13 07:49:57] 2025-10-13 11:48:51,330 | INFO     | sum of square deviations: 27879842816.0625
[2025-10-13 07:49:57] 2025-10-13 11:48:51,339 | INFO     | sum of deviations: 461033285796.5312
[2025-10-13 07:49:57] 2025-10-13 11:48:51,339 | INFO     | mean x: 1760342163.90625
[2025-10-13 07:49:57] 2025-10-13 11:48:51,339 | INFO     | mean y: 2615766.488839286
[2025-10-13 07:49:57] 2025-10-13 11:48:51,339 | INFO     | -- intersect: -29107172882.83232
[2025-10-13 07:49:57] 2025-10-13 11:48:51,339 | INFO     | intersect: -29107172882.83232
[2025-10-13 07:49:57] 2025-10-13 11:48:51,340 | INFO     | chi2: 6.023717300290392
[2025-10-13 07:49:57] 2025-10-13 11:48:51,340 | INFO     | current chi2=6.023717300290392 (change=10.217789627421507 %)
[2025-10-13 07:49:57] 2025-10-13 11:48:51,340 | INFO     | right removable region: 447
[2025-10-13 07:49:57] 2025-10-13 11:48:51,341 | INFO     | sum of square deviations: 27879485293.247818
[2025-10-13 07:49:57] 2025-10-13 11:48:51,345 | INFO     | sum of deviations: 285900944268.20966
[2025-10-13 07:49:57] 2025-10-13 11:48:51,346 | INFO     | mean x: 1760342468.908482
[2025-10-13 07:49:57] 2025-10-13 11:48:51,346 | INFO     | mean y: 2636719.1026785714
[2025-10-13 07:49:57] 2025-10-13 11:48:51,346 | INFO     | -- intersect: -18049474674.010365
[2025-10-13 07:49:57] 2025-10-13 11:48:51,346 | INFO     | intersect: -18049474674.010365
[2025-10-13 07:49:57] 2025-10-13 11:48:51,346 | INFO     | chi2: 2.9575995793175993
[2025-10-13 07:49:57] 2025-10-13 11:48:51,347 | INFO     | current chi2=2.9575995793175993 (change=55.91761459068785 %)
[2025-10-13 07:49:57] 2025-10-13 11:48:51,347 | INFO     | sum of square deviations: 26956259377.575733
[2025-10-13 07:49:57] 2025-10-13 11:48:51,351 | INFO     | sum of deviations: 192276313599.0202
[2025-10-13 07:49:57] 2025-10-13 11:48:51,351 | INFO     | mean x: 1760342621.41535
[2025-10-13 07:49:57] 2025-10-13 11:48:51,351 | INFO     | mean y: 2652166.320541761
[2025-10-13 07:49:57] 2025-10-13 11:48:51,351 | INFO     | -- intersect: -12553696441.84525
[2025-10-13 07:49:57] 2025-10-13 11:48:51,351 | INFO     | intersect: -12553696441.84525
[2025-10-13 07:49:57] 2025-10-13 11:48:51,352 | INFO     | chi2: 1.6122620692902836
[2025-10-13 07:49:57] 2025-10-13 11:48:51,352 | INFO     | current chi2=1.6122620692902836 (change=45.487479760114205 %)
[2025-10-13 07:49:57] 2025-10-13 11:48:51,352 | INFO     | sum of square deviations: 26053584329.662014
[2025-10-13 07:49:57] 2025-10-13 11:48:51,356 | INFO     | sum of deviations: 138498222700.73526
[2025-10-13 07:49:57] 2025-10-13 11:48:51,356 | INFO     | mean x: 1760342773.9269407
[2025-10-13 07:49:57] 2025-10-13 11:48:51,356 | INFO     | mean y: 2661247.429223744
[2025-10-13 07:49:57] 2025-10-13 11:48:51,356 | INFO     | -- intersect: -9355143131.732233
[2025-10-13 07:49:57] 2025-10-13 11:48:51,356 | INFO     | intersect: -9355143131.732233
[2025-10-13 07:49:57] 2025-10-13 11:48:51,357 | INFO     | chi2: 1.2156234675208415
[2025-10-13 07:49:57] 2025-10-13 11:48:51,357 | INFO     | current chi2=1.2156234675208415 (change=24.601372774591297 %)
[2025-10-13 07:49:57] 2025-10-13 11:48:51,357 | INFO     | left removable region: 30
[2025-10-13 07:49:57] 2025-10-13 11:48:51,358 | INFO     | sum of square deviations: 22482576561.93272
[2025-10-13 07:49:57] 2025-10-13 11:48:51,361 | INFO     | sum of deviations: 65987436757.369255
[2025-10-13 07:49:57] 2025-10-13 11:48:51,361 | INFO     | mean x: 1760343048.4724221
[2025-10-13 07:49:57] 2025-10-13 11:48:51,361 | INFO     | mean y: 2682967.901678657
[2025-10-13 07:49:57] 2025-10-13 11:48:51,361 | INFO     | -- intersect: -5164008014.440195
[2025-10-13 07:49:57] 2025-10-13 11:48:51,361 | INFO     | intersect: -5164008014.440195
[2025-10-13 07:49:57] 2025-10-13 11:48:51,362 | INFO     | chi2: 0.07210000305545373
[2025-10-13 07:49:57] 2025-10-13 11:48:51,362 | INFO     | -- intersect: -5164008014.440195
[2025-10-13 07:49:57] 2025-10-13 11:48:51,362 | INFO     | current memory leak: 2.94 B/s (using 417 data points, chi2=0.07)
[2025-10-13 07:49:57] 2025-10-13 11:48:51,363 | INFO     | could have reported an average CPU frequency of 2760 MHz (18 samples)
[2025-10-13 07:49:57] 2025-10-13 11:48:51,363 | INFO     | ..............................
[2025-10-13 07:49:57] 2025-10-13 11:48:51,363 | INFO     | . Timing measurements:
[2025-10-13 07:49:57] 2025-10-13 11:48:51,363 | INFO     | . get job = 1 s
[2025-10-13 07:49:57] 2025-10-13 11:48:51,363 | INFO     | . initial setup = 5 s
[2025-10-13 07:49:57] 2025-10-13 11:48:51,364 | INFO     | . payload setup = 74 s
[2025-10-13 07:49:57] 2025-10-13 11:48:51,364 | INFO     | . stage-in = 1 s
[2025-10-13 07:49:57] 2025-10-13 11:48:51,364 | INFO     | . payload execution = 27631 s
[2025-10-13 07:49:57] 2025-10-13 11:48:51,364 | INFO     | . stage-out = 2 s
[2025-10-13 07:49:57] 2025-10-13 11:48:51,364 | INFO     | . log creation = 0 s
[2025-10-13 07:49:57] 2025-10-13 11:48:51,364 | INFO     | ..............................
[2025-10-13 07:49:57] 2025-10-13 11:48:51,751 | INFO     | 
[2025-10-13 07:49:57] 2025-10-13 11:48:51,751 | INFO     | job summary report
[2025-10-13 07:49:57] 2025-10-13 11:48:51,751 | INFO     | --------------------------------------------------
[2025-10-13 07:49:57] 2025-10-13 11:48:51,751 | INFO     | PanDA job id: 6840853924
[2025-10-13 07:49:57] 2025-10-13 11:48:51,751 | INFO     | task id: 46676269
[2025-10-13 07:49:57] 2025-10-13 11:48:51,751 | INFO     | errors: (none)
[2025-10-13 07:49:57] 2025-10-13 11:48:51,751 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:49:57] 2025-10-13 11:48:51,752 | INFO     | pilot state: finished 
[2025-10-13 07:49:57] 2025-10-13 11:48:51,752 | INFO     | transexitcode: 0
[2025-10-13 07:49:57] 2025-10-13 11:48:51,752 | INFO     | exeerrorcode: 0
[2025-10-13 07:49:57] 2025-10-13 11:48:51,752 | INFO     | exeerrordiag: 
[2025-10-13 07:49:57] 2025-10-13 11:48:51,752 | INFO     | exitcode: 0
[2025-10-13 07:49:57] 2025-10-13 11:48:51,752 | INFO     | exitmsg: OK
[2025-10-13 07:49:57] 2025-10-13 11:48:51,752 | INFO     | cpuconsumptiontime: 46172 s
[2025-10-13 07:49:57] 2025-10-13 11:48:51,752 | INFO     | nevents: 400
[2025-10-13 07:49:57] 2025-10-13 11:48:51,752 | INFO     | neventsw: 0
[2025-10-13 07:49:57] 2025-10-13 11:48:51,752 | INFO     | pid: 2851724
[2025-10-13 07:49:57] 2025-10-13 11:48:51,752 | INFO     | pgrp: 2851724
[2025-10-13 07:49:57] 2025-10-13 11:48:51,752 | INFO     | corecount: 12
[2025-10-13 07:49:57] 2025-10-13 11:48:51,753 | INFO     | event service: False
[2025-10-13 07:49:57] 2025-10-13 11:48:51,753 | INFO     | sizes: {0: 2348029, 1: 2348714, 3: 2348913, 5: 2348913, 6: 2348969, 18: 2348997, 29: 2349153, 40: 2349181, 52: 2349209, 56: 2349499, 64: 2349527, 27709: 2385885, 2
[2025-10-13 07:49:57] 2025-10-13 11:48:51,753 | INFO     | --------------------------------------------------
[2025-10-13 07:49:57] 2025-10-13 11:48:51,753 | INFO     | 
[2025-10-13 07:49:57] 2025-10-13 11:48:51,753 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-13 07:49:57] 2025-10-13 11:48:51,773 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:49:57] 2025-10-13 11:48:51,774 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:49:57] 2025-10-13 11:48:51,774 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:49:57] 2025-10-13 11:48:51,774 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:49:57] 2025-10-13 11:48:51,774 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:49:57] 2025-10-13 11:48:51,774 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:49:57] 2025-10-13 11:48:51,774 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:49:57] 2025-10-13 11:48:51,774 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:49:57] 2025-10-13 11:48:51,774 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:49:57] 2025-10-13 11:48:51,774 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:49:57] 2025-10-13 11:48:51,775 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:49:57] 2025-10-13 11:48:51,775 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:49:57] 2025-10-13 11:48:51,775 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:49:57] 2025-10-13 11:48:51,775 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:49:57] 2025-10-13 11:48:51,775 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:49:57] 2025-10-13 11:48:51,775 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:49:57] 2025-10-13 11:48:51,775 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:49:57] 2025-10-13 11:48:51,775 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:49:57] 2025-10-13 11:48:51,775 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:49:57] 2025-10-13 11:48:51,775 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:49:57] 2025-10-13 11:48:51,776 | INFO     | job 6840853924 has completed (purged errors)
[2025-10-13 07:49:57] 2025-10-13 11:48:51,776 | INFO     | overall cleanup function is called
[2025-10-13 07:49:57] 2025-10-13 11:48:52,786 | INFO     | --- collectZombieJob: --- 10, [2851724]
[2025-10-13 07:49:57] 2025-10-13 11:48:52,786 | INFO     | zombie collector waiting for pid 2851724
[2025-10-13 07:49:57] 2025-10-13 11:48:52,786 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:49:57] 2025-10-13 11:48:52,786 | INFO     | collected zombie processes
[2025-10-13 07:49:57] 2025-10-13 11:48:52,786 | INFO     | will attempt to kill all subprocesses of pid=2851724
[2025-10-13 07:49:57] 2025-10-13 11:48:53,221 | INFO     | process IDs to be killed: [2851724] (in reverse order)
[2025-10-13 07:49:57] 2025-10-13 11:48:53,318 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:49:57] 2025-10-13 11:48:53,319 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:49:57] 2025-10-13 11:48:53,330 | INFO     | did not find any defunct processes belonging to 2851724
[2025-10-13 07:49:57] 2025-10-13 11:48:53,342 | INFO     | did not find any defunct processes belonging to 2851724
[2025-10-13 07:49:57] 2025-10-13 11:48:53,342 | INFO     | ready for new job
[2025-10-13 07:49:57] 2025-10-13 11:48:53,342 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:49:57] 2025-10-13 11:48:53,345 | INFO     | ***************************************
[2025-10-13 07:49:57] 2025-10-13 11:48:53,346 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:49:57] 2025-10-13 11:48:53,346 | INFO     | ***************************************
[2025-10-13 07:49:57] 2025-10-13 11:48:53,346 | INFO     | 
[2025-10-13 07:49:57] 2025-10-13 11:48:53,349 | INFO     | architecture information:
[2025-10-13 07:49:57] 2025-10-13 11:48:53,349 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:49:57] 2025-10-13 11:48:53,367 | INFO     | cat /etc/os-release:
[2025-10-13 07:49:57] NAME="CentOS Linux"
[2025-10-13 07:49:57] VERSION="7 (Core)"
[2025-10-13 07:49:57] ID="centos"
[2025-10-13 07:49:57] ID_LIKE="rhel fedora"
[2025-10-13 07:49:57] VERSION_ID="7"
[2025-10-13 07:49:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:49:57] ANSI_COLOR="0;31"
[2025-10-13 07:49:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:49:57] HOME_URL="https://www.centos.org/"
[2025-10-13 07:49:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:49:57] 
[2025-10-13 07:49:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:49:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:49:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:49:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:49:57] 
[2025-10-13 07:49:57] 2025-10-13 11:48:53,367 | INFO     | ***************************************
[2025-10-13 07:49:57] 2025-10-13 11:48:53,870 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-13 07:49:57] 2025-10-13 11:48:53,888 | INFO     | sufficient remaining disk space (75528929280 B)
[2025-10-13 07:49:57] 2025-10-13 11:48:53,888 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:49:57] 2025-10-13 11:48:53,889 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:49:57] 2025-10-13 11:48:53,889 | INFO     | update_server=False
[2025-10-13 07:49:57] 2025-10-13 11:48:53,889 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:49:57] 2025-10-13 11:48:53,889 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:49:57] 2025-10-13 11:48:53,889 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:49:57] 2025-10-13 11:48:53,939 | INFO     | all data control threads have been joined
[2025-10-13 07:49:57] 2025-10-13 11:48:54,349 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 07:49:57] 2025-10-13 11:48:54,349 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 07:49:57] 2025-10-13 11:48:54,349 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:49:57] 2025-10-13 11:48:54,350 | INFO     | will abort loop
[2025-10-13 07:49:57] 2025-10-13 11:48:54,811 | INFO     | all payload control threads have been joined
[2025-10-13 07:49:57] 2025-10-13 11:48:54,895 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:49:57] 2025-10-13 11:48:54,945 | INFO     | [data] control thread has finished
[2025-10-13 07:49:57] 2025-10-13 11:48:55,099 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:49:57] 2025-10-13 11:48:55,140 | INFO     | all job control threads have been joined
[2025-10-13 07:49:57] 2025-10-13 11:48:55,143 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:49:57] 2025-10-13 11:48:55,355 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:49:57] 2025-10-13 11:48:55,500 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:49:57] 2025-10-13 11:48:55,640 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:49:57] 2025-10-13 11:48:55,816 | INFO     | [payload] control thread has finished
[2025-10-13 07:49:57] 2025-10-13 11:48:55,896 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:49:57] 2025-10-13 11:48:56,091 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:49:57] 2025-10-13 11:48:56,145 | INFO     | [job] control thread has finished
[2025-10-13 07:49:57] 2025-10-13 11:48:56,249 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:49:57] 2025-10-13 11:48:56,256 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:49:57] 2025-10-13 11:48:56,385 | INFO     | [job] validate thread has finished
[2025-10-13 07:49:57] 2025-10-13 11:48:56,500 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:49:57] 2025-10-13 11:48:57,505 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:49:57] 2025-10-13 11:48:57,896 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:49:57] 2025-10-13 11:49:24,341 | INFO     | PID=2840842 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 07:49:57] 2025-10-13 11:49:24,341 | INFO     | .. there are 24 such processes running
[2025-10-13 07:49:57] 2025-10-13 11:49:24,343 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:49:57] 2025-10-13 11:49:24,343 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:49:57] 2025-10-13 11:49:24,343 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:49:57] 2025-10-13 11:49:44,815 [wrapper] supervise_pilot (15 min periods counter: 32)
[2025-10-13 07:49:57] 2025-10-13 11:49:50,748 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:49:57] 2025-10-13 11:49:52,341 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140565201684288)>', '<ExcThread(monitor, started 140564255196928)>']
[2025-10-13 07:49:57] 2025-10-13 11:49:52,497 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:49:57] 2025-10-13 11:49:52,498 | INFO     | [monitor] control thread has ended
[2025-10-13 07:49:57] 2025-10-13 11:49:57,366 | INFO     | all workflow threads have been joined
[2025-10-13 07:49:57] 2025-10-13 11:49:57,367 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:49:57] 2025-10-13 11:49:57,367 | INFO     | traces error code: 0
[2025-10-13 07:49:57] 2025-10-13 11:49:57,368 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:49:57] 2025-10-13 11:49:57,591 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:49:57] 2025-10-13 11:49:57,593 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:49:57] 2025-10-13 11:49:57,596 [wrapper] pilotpid: 2840842
[2025-10-13 07:49:57] 2025-10-13 11:49:57,599 [wrapper] Pilot exit status: 0
[2025-10-13 07:49:57] 2025-10-13 11:49:57,613 [wrapper] pandaids: 6840853924
[2025-10-13 07:49:57] 2025-10-13 11:49:57,675 [wrapper] cleanup supervisor_pilot     468 2840843
[2025-10-13 07:49:57] 2025-10-13 11:49:57,678 [wrapper] Test setup, not cleaning
[2025-10-13 07:49:57] 2025-10-13 11:49:57,681 [wrapper] apfmon messages muted
[2025-10-13 07:49:57] 2025-10-13 11:49:57,684 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:49:57] 2025-10-13 11:49:57,687 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:49:57]  *** Error codes and diagnostics ***
[2025-10-13 07:49:57]     "exeErrorCode": 0,
[2025-10-13 07:49:57]     "exeErrorDiag": "",
[2025-10-13 07:49:57]     "pilotErrorCode": 0,
[2025-10-13 07:49:57]     "pilotErrorDiag": "",
[2025-10-13 07:49:57]  *** Listing of results directory ***
[2025-10-13 07:49:57] total 415080
[2025-10-13 07:49:57] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 18:49 queuedata.json
[2025-10-13 07:49:57] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 18:49 pilot3.tar.gz
[2025-10-13 07:49:57] -rwx------. 1 boincer umatlas     36292 Oct 12 18:49 runpilot2-wrapper.sh
[2025-10-13 07:49:57] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:49:57] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:02 run_atlas
[2025-10-13 07:49:57] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:02 job.xml
[2025-10-13 07:49:57] -rw-r--r--. 2 boincer umatlas 219764389 Oct 13 00:02 EVNT.46676267._004632.pool.root.1
[2025-10-13 07:49:57] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 00:02 input.tar.gz
[2025-10-13 07:49:57] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:02 start_atlas.sh
[2025-10-13 07:49:57] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:02 shared
[2025-10-13 07:49:57] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:02 boinc_lockfile
[2025-10-13 07:49:57] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:03 pandaJob.out
[2025-10-13 07:49:57] -rw-------. 1 boincer umatlas    974373 Oct 13 00:04 agis_schedconf.cvmfs.json
[2025-10-13 07:49:57] drwx------. 5 boincer umatlas      4096 Oct 13 00:04 pilot3
[2025-10-13 07:49:57] -rw-r--r--. 1 boincer umatlas      6839 Oct 13 07:47 init_data.xml
[2025-10-13 07:49:57] -rw-r--r--. 1 boincer umatlas       531 Oct 13 07:48 boinc_task_state.xml
[2025-10-13 07:49:57] -rw-------. 1 boincer umatlas 193965479 Oct 13 07:48 HITS.46676269._091524.pool.root.1
[2025-10-13 07:49:57] -rw-------. 1 boincer umatlas      1041 Oct 13 07:48 memory_monitor_summary.json
[2025-10-13 07:49:57] -rw-------. 1 boincer umatlas   1560580 Oct 13 07:48 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:49:57] -rw-------. 1 boincer umatlas    668420 Oct 13 07:48 log.46676269._091524.job.log.tgz.1
[2025-10-13 07:49:57] -rw-------. 1 boincer umatlas      7830 Oct 13 07:48 heartbeat.json
[2025-10-13 07:49:57] -rw-------. 1 boincer umatlas        95 Oct 13 07:49 pilot_heartbeat.json
[2025-10-13 07:49:57] -rw-r--r--. 1 boincer umatlas        28 Oct 13 07:49 wrapper_checkpoint.txt
[2025-10-13 07:49:57] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 07:49 boinc_mmap_file
[2025-10-13 07:49:57] -rw-------. 1 boincer umatlas      5010 Oct 13 07:49 pilotlog.txt
[2025-10-13 07:49:57] -rw-------. 1 boincer umatlas   3038470 Oct 13 07:49 log.46676269._091524.job.log.1
[2025-10-13 07:49:57] -rw-------. 1 boincer umatlas       357 Oct 13 07:49 output.list
[2025-10-13 07:49:57] -rw-r--r--. 1 boincer umatlas       620 Oct 13 07:49 runtime_log
[2025-10-13 07:49:57] -rw-------. 1 boincer umatlas   3727360 Oct 13 07:49 result.tar.gz
[2025-10-13 07:49:57] -rw-r--r--. 1 boincer umatlas      8711 Oct 13 07:49 runtime_log.err
[2025-10-13 07:49:57] -rw-------. 1 boincer umatlas       657 Oct 13 07:49 HYANDms3JS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3vlNDmM44epm.diag
[2025-10-13 07:49:57] -rw-r--r--. 1 boincer umatlas     21064 Oct 13 07:49 stderr.txt
[2025-10-13 07:49:57] HITS file was successfully produced:
[2025-10-13 07:49:57] -rw-------. 1 boincer umatlas 193965479 Oct 13 07:48 shared/HITS.pool.root.1
[2025-10-13 07:49:57]  *** Contents of shared directory: ***
[2025-10-13 07:49:57] total 408256
[2025-10-13 07:49:57] -rw-r--r--. 2 boincer umatlas 219764389 Oct 13 00:02 ATLAS.root_0
[2025-10-13 07:49:57] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 00:02 input.tar.gz
[2025-10-13 07:49:57] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:02 start_atlas.sh
[2025-10-13 07:49:57] -rw-------. 1 boincer umatlas 193965479 Oct 13 07:48 HITS.pool.root.1
[2025-10-13 07:49:57] -rw-------. 1 boincer umatlas   3727360 Oct 13 07:49 result.tar.gz
07:49:59 (2834323): run_atlas exited; CPU time 47053.183349
07:49:59 (2834323): called boinc_finish(0)

</stderr_txt>
]]>

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