Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:34:36 (28405): wrapper (7.7.26015): starting
15:34:36 (28405): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 15:34:36] Arguments: --nthreads 4
[2025-10-13 15:34:36] Threads: 4
[2025-10-13 15:34:36] Checking for CVMFS
[2025-10-13 15:34:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 15:34:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 15:34:36] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 15:34:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 15:34:36] 2.9.2.0 3212 71 51324 151662 0 57 33895364 36864001 0 130560 0 65465 99.996 2594 1339 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 15:34:36] CVMFS is ok
[2025-10-13 15:34:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 15:34:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 15:34:36] Further information can be found at the LHC@home message board.
[2025-10-13 15:34:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 15:34:36] Checking for apptainer binary...
[2025-10-13 15:34:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 15:34:36] Running /usr/bin/apptainer --version
[2025-10-13 15:34:36] apptainer version 1.4.1-1.1
[2025-10-13 15:34:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 15:34:36] magicA250
[2025-10-13 15:34:36] apptainer works
[2025-10-13 15:34:36] Set ATHENA_PROC_NUMBER=4
[2025-10-13 15:34:36] Set ATHENA_CORE_NUMBER=4
[2025-10-13 15:34:36] Starting ATLAS job with PandaID=6840748943
[2025-10-13 15:34:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 16:43:55]  *** The last 200 lines of the pilot log: ***
[2025-10-13 16:43:55] 2025-10-13 14:43:09,705 | INFO     | will abort loop
[2025-10-13 16:43:55] 2025-10-13 14:43:09,898 | INFO     | all payload control threads have been joined
[2025-10-13 16:43:55] 2025-10-13 14:43:10,302 | INFO     | all job control threads have been joined
[2025-10-13 16:43:55] 2025-10-13 14:43:10,445 | INFO     | all data control threads have been joined
[2025-10-13 16:43:55] 2025-10-13 14:43:10,511 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 16:43:55] 2025-10-13 14:43:10,629 | INFO     | [job] retrieve thread has finished
[2025-10-13 16:43:55] 2025-10-13 14:43:10,629 | INFO     | [job] queue monitor thread has finished
[2025-10-13 16:43:55] 2025-10-13 14:43:10,711 | INFO     | [job] job monitor thread has finished
[2025-10-13 16:43:55] 2025-10-13 14:43:10,904 | INFO     | [payload] control thread has finished
[2025-10-13 16:43:55] 2025-10-13 14:43:11,049 | INFO     | [job] validate thread has finished
[2025-10-13 16:43:55] 2025-10-13 14:43:11,070 | INFO     | [payload] failed_post thread has finished
[2025-10-13 16:43:55] 2025-10-13 14:43:11,073 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 16:43:55] 2025-10-13 14:43:11,177 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 16:43:55] 2025-10-13 14:43:11,308 | INFO     | [job] control thread has finished
[2025-10-13 16:43:55] 2025-10-13 14:43:11,328 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 16:43:55] 2025-10-13 14:43:11,450 | INFO     | [data] control thread has finished
[2025-10-13 16:43:55] 2025-10-13 14:43:11,630 | INFO     | [data] copytool_out thread has finished
[2025-10-13 16:43:55] 2025-10-13 14:43:11,716 | INFO     | [payload] validate_post thread has finished
[2025-10-13 16:43:55] 2025-10-13 14:43:11,830 | INFO     | [data] copytool_in thread has finished
[2025-10-13 16:43:55] 2025-10-13 14:43:14,518 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 16:43:55] 2025-10-13 14:43:19,881 | INFO     | job.realtimelogging is not enabled
[2025-10-13 16:43:55] 2025-10-13 14:43:20,887 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 16:43:55] 2025-10-13 14:43:39,766 | INFO     | PID=32188 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 16:43:55] 2025-10-13 14:43:39,766 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 16:43:55] 2025-10-13 14:43:39,766 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 16:43:55] 2025-10-13 14:43:39,766 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 16:43:55] 2025-10-13 14:43:49,534 | INFO     | [monitor] cgroup control has ended
[2025-10-13 16:43:55] 2025-10-13 14:43:50,540 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140515607598912)>', '<ExcThread(monitor, started 140514703677184)>']
[2025-10-13 16:43:55] 2025-10-13 14:43:50,825 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 16:43:55] 2025-10-13 14:43:50,825 | INFO     | [monitor] control thread has ended
[2025-10-13 16:43:55] 2025-10-13 14:43:55,565 | INFO     | all workflow threads have been joined
[2025-10-13 16:43:55] 2025-10-13 14:43:55,566 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 16:43:55] 2025-10-13 14:43:55,566 | INFO     | traces error code: 0
[2025-10-13 16:43:55] 2025-10-13 14:43:55,566 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 16:43:55] 2025-10-13 14:43:55,646 [wrapper] ==== pilot stdout END ====
[2025-10-13 16:43:55] 2025-10-13 14:43:55,650 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 16:43:55] 2025-10-13 14:43:55,654 [wrapper] pilotpid: 32188
[2025-10-13 16:43:55] 2025-10-13 14:43:55,658 [wrapper] Pilot exit status: 0
[2025-10-13 16:43:55] 2025-10-13 14:43:55,670 [wrapper] pandaids: 6840748943
[2025-10-13 16:43:55] 2025-10-13 14:43:55,694 [wrapper] cleanup supervisor_pilot   48949 32189
[2025-10-13 16:43:55] 2025-10-13 14:43:55,698 [wrapper] Test setup, not cleaning
[2025-10-13 16:43:55] 2025-10-13 14:43:55,702 [wrapper] apfmon messages muted
[2025-10-13 16:43:55] 2025-10-13 14:43:55,706 [wrapper] ==== wrapper stdout END ====
[2025-10-13 16:43:55] 2025-10-13 14:43:55,709 [wrapper] ==== wrapper stderr END ====
[2025-10-13 16:43:55]  *** Error codes and diagnostics ***
[2025-10-13 16:43:55]     "exeErrorCode": 0,
[2025-10-13 16:43:55]     "exeErrorDiag": "",
[2025-10-13 16:43:55]     "pilotErrorCode": 0,
[2025-10-13 16:43:55]     "pilotErrorDiag": "",
[2025-10-13 16:43:55]  *** Listing of results directory ***
[2025-10-13 16:43:55] total 399232
[2025-10-13 16:43:55] -rw-r--r-- 1 boinc boinc    557409 Oct 12 22:08 pilot3.tar.gz
[2025-10-13 16:43:55] -rw-r--r-- 1 boinc boinc      5112 Oct 12 22:21 queuedata.json
[2025-10-13 16:43:55] -rwx------ 1 boinc boinc     36292 Oct 12 22:21 runpilot2-wrapper.sh
[2025-10-13 16:43:55] -rw-r--r-- 1 boinc boinc       100 Oct 13 15:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 16:43:55] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 15:34 run_atlas
[2025-10-13 16:43:55] -rw-r--r-- 1 boinc boinc       105 Oct 13 15:34 job.xml
[2025-10-13 16:43:55] -rw-r--r-- 2 boinc boinc 220010968 Oct 13 15:34 EVNT.46676267._004493.pool.root.1
[2025-10-13 16:43:55] drwxrwx--x 2 boinc boinc      4096 Oct 13 15:34 shared
[2025-10-13 16:43:55] -rw-r--r-- 2 boinc boinc    569679 Oct 13 15:34 input.tar.gz
[2025-10-13 16:43:55] -rw-r--r-- 2 boinc boinc     15120 Oct 13 15:34 start_atlas.sh
[2025-10-13 16:43:55] -rw-r--r-- 1 boinc boinc         0 Oct 13 15:34 boinc_setup_complete
[2025-10-13 16:43:55] -rw-r--r-- 1 boinc boinc      6376 Oct 13 15:34 init_data.xml
[2025-10-13 16:43:55] -rw-r--r-- 1 boinc boinc         0 Oct 13 15:34 boinc_lockfile
[2025-10-13 16:43:55] -rw-r--r-- 1 boinc boinc      2547 Oct 13 15:34 pandaJob.out
[2025-10-13 16:43:55] -rw------- 1 boinc boinc    972489 Oct 13 15:34 agis_schedconf.cvmfs.json
[2025-10-13 16:43:55] -rw------- 1 boinc boinc   1560580 Oct 13 15:34 agis_ddmendpoints.agis.ALL.json
[2025-10-13 16:43:55] drwx------ 5 boinc boinc      4096 Oct 13 15:34 pilot3
[2025-10-13 16:43:55] -rw------- 1 boinc boinc 183211577 Oct 13 16:42 HITS.46676269._088509.pool.root.1
[2025-10-13 16:43:55] -rw-r--r-- 1 boinc boinc       529 Oct 13 16:42 boinc_task_state.xml
[2025-10-13 16:43:55] -rw------- 1 boinc boinc      1024 Oct 13 16:42 memory_monitor_summary.json
[2025-10-13 16:43:55] -rw------- 1 boinc boinc    243456 Oct 13 16:43 log.46676269._088509.job.log.tgz.1
[2025-10-13 16:43:55] -rw------- 1 boinc boinc        95 Oct 13 16:43 pilot_heartbeat.json
[2025-10-13 16:43:55] -rw------- 1 boinc boinc      7774 Oct 13 16:43 heartbeat.json
[2025-10-13 16:43:55] -rw-r--r-- 1 boinc boinc        27 Oct 13 16:43 wrapper_checkpoint.txt
[2025-10-13 16:43:55] -rw-r--r-- 1 boinc boinc      8192 Oct 13 16:43 boinc_mmap_file
[2025-10-13 16:43:55] -rw------- 1 boinc boinc      5008 Oct 13 16:43 pilotlog.txt
[2025-10-13 16:43:55] -rw------- 1 boinc boinc    609855 Oct 13 16:43 log.46676269._088509.job.log.1
[2025-10-13 16:43:55] -rw------- 1 boinc boinc       357 Oct 13 16:43 output.list
[2025-10-13 16:43:55] -rw-r--r-- 1 boinc boinc       620 Oct 13 16:43 runtime_log
[2025-10-13 16:43:55] -rw------- 1 boinc boinc    870400 Oct 13 16:43 result.tar.gz
[2025-10-13 16:43:55] -rw-r--r-- 1 boinc boinc      8792 Oct 13 16:43 runtime_log.err
[2025-10-13 16:43:55] -rw------- 1 boinc boinc       661 Oct 13 16:43 4LCLDmqkHS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmWwUMDmkXT8pm.diag
[2025-10-13 16:43:55] -rw-r--r-- 1 boinc boinc      6892 Oct 13 16:43 stderr.txt
[2025-10-13 16:43:55] HITS file was successfully produced:
[2025-10-13 16:43:55] -rw------- 1 boinc boinc 183211577 Oct 13 16:42 shared/HITS.pool.root.1
[2025-10-13 16:43:55]  *** Contents of shared directory: ***
[2025-10-13 16:43:55] total 395212
[2025-10-13 16:43:55] -rw-r--r-- 2 boinc boinc 220010968 Oct 13 15:34 ATLAS.root_0
[2025-10-13 16:43:55] -rw-r--r-- 2 boinc boinc    569679 Oct 13 15:34 input.tar.gz
[2025-10-13 16:43:55] -rw-r--r-- 2 boinc boinc     15120 Oct 13 15:34 start_atlas.sh
[2025-10-13 16:43:55] -rw------- 1 boinc boinc 183211577 Oct 13 16:42 HITS.pool.root.1
[2025-10-13 16:43:55] -rw------- 1 boinc boinc    870400 Oct 13 16:43 result.tar.gz
16:43:57 (28405): run_atlas exited; CPU time 15375.301583
16:43:57 (28405): called boinc_finish(0)

</stderr_txt>
]]>

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