Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:36:19 (2212680): wrapper (7.7.26015): starting
19:36:19 (2212680): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 19:36:19] Arguments: --nthreads 12
[2025-10-13 19:36:19] Threads: 12
[2025-10-13 19:36:19] Checking for CVMFS
[2025-10-13 19:36:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 19:36:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 19:36:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 19:36:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 19:36:20] 2.13.1.0 2980946 6108 78444 151668 1 57 2996815 4097024 0 130560 0 9689854 99.995 203640 7771 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-10-13 19:36:20] CVMFS is ok
[2025-10-13 19:36:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 19:36:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 19:36:20] Further information can be found at the LHC@home message board.
[2025-10-13 19:36:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 19:36:20] Checking for apptainer binary...
[2025-10-13 19:36:20] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-10-13 19:36:20] apptainer is not installed, using version from CVMFS
[2025-10-13 19:36:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 19:36:20] pckelar2.cern.ch
[2025-10-13 19:36:20] apptainer works
[2025-10-13 19:36:20] Set ATHENA_PROC_NUMBER=12
[2025-10-13 19:36:20] Set ATHENA_CORE_NUMBER=12
[2025-10-13 19:36:20] Starting ATLAS job with PandaID=6840853871
[2025-10-13 19:36:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 20:25:52]  *** The last 200 lines of the pilot log: ***
[2025-10-13 20:25:52]  storage_token=
[2025-10-13 20:25:52]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6840853871/log.46676269._091494.job.log.tgz.1
[2025-10-13 20:25:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/92/65/log.46676269._091494.job.log.tgz.1
[2025-10-13 20:25:52]  workdir=None
[2025-10-13 20:25:52] ]
[2025-10-13 20:25:52] 2025-10-13 18:25:09,691 | INFO     | transferring file log.46676269._091494.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6840853871/log.46676269._091494.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-13 20:25:52] 2025-10-13 18:25:09,691 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6840853871/log.46676269._091494.job.log.tgz.1 /var/lib/boinc/slots/0/log.46676269._091494.job
[2025-10-13 20:25:52] 2025-10-13 18:25:09,705 | INFO     | adding to output.list: log.46676269._091494.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/92/65/log.46676269._091494.job.log.tg
[2025-10-13 20:25:52] 2025-10-13 18:25:09,706 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 20:25:52] 2025-10-13 18:25:09,706 | INFO     | summary of transferred files:
[2025-10-13 20:25:52] 2025-10-13 18:25:09,706 | INFO     |  -- lfn=log.46676269._091494.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 20:25:52] 2025-10-13 18:25:09,707 | INFO     | stage-out finished correctly
[2025-10-13 20:25:52] 2025-10-13 18:25:10,369 | INFO     | monitor loop #226: job 0:6840853871 is in state 'finished'
[2025-10-13 20:25:52] 2025-10-13 18:25:10,369 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 20:25:52] 2025-10-13 18:25:10,839 | INFO     | time since job start (2922s) is within the limit (172800.0s)
[2025-10-13 20:25:52] 2025-10-13 18:25:12,428 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 20:25:52] 2025-10-13 18:25:12,844 | INFO     | time since job start (2924s) is within the limit (172800.0s)
[2025-10-13 20:25:52] 2025-10-13 18:25:12,872 | INFO     | monitor loop #227: job 0:6840853871 is in state 'finished'
[2025-10-13 20:25:52] 2025-10-13 18:25:12,872 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 20:25:52] 2025-10-13 18:25:13,949 | INFO     | PID=2216497 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 20:25:52] 2025-10-13 18:25:14,097 | INFO     | job 6840853871 has state=finished
[2025-10-13 20:25:52] 2025-10-13 18:25:14,097 | INFO     | preparing for final server update for job 6840853871 in state='finished'
[2025-10-13 20:25:52] 2025-10-13 18:25:14,098 | INFO     | this job has now completed (state=finished)
[2025-10-13 20:25:52] 2025-10-13 18:25:14,098 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 20:25:52] 2025-10-13 18:25:14,098 | INFO     | log transfer has been attempted: DONE
[2025-10-13 20:25:52] 2025-10-13 18:25:14,098 | INFO     | job 6840853871 has finished - writing final server update
[2025-10-13 20:25:52] 2025-10-13 18:25:14,098 | INFO     | total number of processed events: 400 (read)
[2025-10-13 20:25:52] 2025-10-13 18:25:14,101 | INFO     | executing command: lscpu
[2025-10-13 20:25:52] 2025-10-13 18:25:14,126 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 20:25:52] 2025-10-13 18:25:14,950 | INFO     | time since job start (2926s) is within the limit (172800.0s)
[2025-10-13 20:25:52] 2025-10-13 18:25:15,375 | INFO     | monitor loop #228: job 0:6840853871 is in state 'finished'
[2025-10-13 20:25:52] 2025-10-13 18:25:15,376 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 20:25:52] 2025-10-13 18:25:16,954 | INFO     | time since job start (2928s) is within the limit (172800.0s)
[2025-10-13 20:25:52] 2025-10-13 18:25:17,878 | INFO     | monitor loop #229: job 0:6840853871 is in state 'finished'
[2025-10-13 20:25:52] 2025-10-13 18:25:17,878 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 20:25:52] 2025-10-13 18:25:18,959 | INFO     | time since job start (2930s) is within the limit (172800.0s)
[2025-10-13 20:25:52] 2025-10-13 18:25:19,669 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 20:25:52] 2025-10-13 18:25:19,672 | INFO     | found 20 cores (10 cores per socket, 2 sockets) , CPU MHz: 2570.34775
[2025-10-13 20:25:52] 2025-10-13 18:25:19,674 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6840853871/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 20:25:52] 2025-10-13 18:25:19,675 | INFO     | extracted standard info from prmon json
[2025-10-13 20:25:52] 2025-10-13 18:25:19,675 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 20:25:52] 2025-10-13 18:25:19,675 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 20:25:52] 2025-10-13 18:25:19,675 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 20:25:52] 2025-10-13 18:25:19,675 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 20:25:52] 2025-10-13 18:25:19,676 | INFO     | fitting pss+swap vs Time
[2025-10-13 20:25:52] 2025-10-13 18:25:19,676 | INFO     | sum of square deviations: 21358540.0
[2025-10-13 20:25:52] 2025-10-13 18:25:19,676 | INFO     | sum of deviations: -4383338305.0
[2025-10-13 20:25:52] 2025-10-13 18:25:19,676 | INFO     | mean x: 1760378538.0
[2025-10-13 20:25:52] 2025-10-13 18:25:19,676 | INFO     | mean y: 3032614.43902439
[2025-10-13 20:25:52] 2025-10-13 18:25:19,676 | INFO     | -- intersect: 361279350046.0284
[2025-10-13 20:25:52] 2025-10-13 18:25:19,676 | INFO     | intersect: 361279350046.0284
[2025-10-13 20:25:52] 2025-10-13 18:25:19,677 | INFO     | chi2: 0.06920417496271151
[2025-10-13 20:25:52] 2025-10-13 18:25:19,677 | INFO     | -- intersect: 361279350046.0284
[2025-10-13 20:25:52] 2025-10-13 18:25:19,677 | INFO     | current memory leak: -205.23 B/s (using 41 data points, chi2=0.07)
[2025-10-13 20:25:52] 2025-10-13 18:25:19,677 | INFO     | could have reported an average CPU frequency of 2548 MHz (5 samples)
[2025-10-13 20:25:52] 2025-10-13 18:25:19,677 | INFO     | ..............................
[2025-10-13 20:25:52] 2025-10-13 18:25:19,677 | INFO     | . Timing measurements:
[2025-10-13 20:25:52] 2025-10-13 18:25:19,677 | INFO     | . get job = 0 s
[2025-10-13 20:25:52] 2025-10-13 18:25:19,677 | INFO     | . initial setup = 1 s
[2025-10-13 20:25:52] 2025-10-13 18:25:19,677 | INFO     | . payload setup = 6 s
[2025-10-13 20:25:52] 2025-10-13 18:25:19,677 | INFO     | . stage-in = 0 s
[2025-10-13 20:25:52] 2025-10-13 18:25:19,677 | INFO     | . payload execution = 2895 s
[2025-10-13 20:25:52] 2025-10-13 18:25:19,677 | INFO     | . stage-out = 0 s
[2025-10-13 20:25:52] 2025-10-13 18:25:19,678 | INFO     | . log creation = 0 s
[2025-10-13 20:25:52] 2025-10-13 18:25:19,678 | INFO     | ..............................
[2025-10-13 20:25:52] 2025-10-13 18:25:19,732 | INFO     | 
[2025-10-13 20:25:52] 2025-10-13 18:25:19,732 | INFO     | job summary report
[2025-10-13 20:25:52] 2025-10-13 18:25:19,732 | INFO     | --------------------------------------------------
[2025-10-13 20:25:52] 2025-10-13 18:25:19,732 | INFO     | PanDA job id: 6840853871
[2025-10-13 20:25:52] 2025-10-13 18:25:19,732 | INFO     | task id: 46676269
[2025-10-13 20:25:52] 2025-10-13 18:25:19,732 | INFO     | errors: (none)
[2025-10-13 20:25:52] 2025-10-13 18:25:19,732 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 20:25:52] 2025-10-13 18:25:19,733 | INFO     | pilot state: finished 
[2025-10-13 20:25:52] 2025-10-13 18:25:19,733 | INFO     | transexitcode: 0
[2025-10-13 20:25:52] 2025-10-13 18:25:19,733 | INFO     | exeerrorcode: 0
[2025-10-13 20:25:52] 2025-10-13 18:25:19,733 | INFO     | exeerrordiag: 
[2025-10-13 20:25:52] 2025-10-13 18:25:19,733 | INFO     | exitcode: 0
[2025-10-13 20:25:52] 2025-10-13 18:25:19,733 | INFO     | exitmsg: OK
[2025-10-13 20:25:52] 2025-10-13 18:25:19,733 | INFO     | cpuconsumptiontime: 30431 s
[2025-10-13 20:25:52] 2025-10-13 18:25:19,733 | INFO     | nevents: 400
[2025-10-13 20:25:52] 2025-10-13 18:25:19,733 | INFO     | neventsw: 0
[2025-10-13 20:25:52] 2025-10-13 18:25:19,733 | INFO     | pid: 2223913
[2025-10-13 20:25:52] 2025-10-13 18:25:19,733 | INFO     | pgrp: 2223913
[2025-10-13 20:25:52] 2025-10-13 18:25:19,733 | INFO     | corecount: 12
[2025-10-13 20:25:52] 2025-10-13 18:25:19,733 | INFO     | event service: False
[2025-10-13 20:25:52] 2025-10-13 18:25:19,733 | INFO     | sizes: {0: 2348806, 4: 2349068, 11: 2349096, 2905: 2374498, 2906: 2374497, 2907: 2383551, 2910: 2383735, 2917: 2383961}
[2025-10-13 20:25:52] 2025-10-13 18:25:19,733 | INFO     | --------------------------------------------------
[2025-10-13 20:25:52] 2025-10-13 18:25:19,733 | INFO     | 
[2025-10-13 20:25:52] 2025-10-13 18:25:19,733 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-13 20:25:52] 2025-10-13 18:25:19,750 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 20:25:52] 2025-10-13 18:25:19,750 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 20:25:52] 2025-10-13 18:25:19,750 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 20:25:52] 2025-10-13 18:25:19,750 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 20:25:52] 2025-10-13 18:25:19,750 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 20:25:52] 2025-10-13 18:25:19,750 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 20:25:52] 2025-10-13 18:25:19,750 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 20:25:52] 2025-10-13 18:25:19,750 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 20:25:52] 2025-10-13 18:25:19,750 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 20:25:52] 2025-10-13 18:25:19,750 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 20:25:52] 2025-10-13 18:25:19,750 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 20:25:52] 2025-10-13 18:25:19,750 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 20:25:52] 2025-10-13 18:25:19,751 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 20:25:52] 2025-10-13 18:25:19,751 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 20:25:52] 2025-10-13 18:25:19,751 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 20:25:52] 2025-10-13 18:25:19,751 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 20:25:52] 2025-10-13 18:25:19,751 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 20:25:52] 2025-10-13 18:25:19,751 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 20:25:52] 2025-10-13 18:25:19,751 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 20:25:52] 2025-10-13 18:25:19,751 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 20:25:52] 2025-10-13 18:25:19,751 | INFO     | job 6840853871 has completed (purged errors)
[2025-10-13 20:25:52] 2025-10-13 18:25:19,751 | INFO     | overall cleanup function is called
[2025-10-13 20:25:52] 2025-10-13 18:25:20,757 | INFO     | --- collectZombieJob: --- 10, [2223913]
[2025-10-13 20:25:52] 2025-10-13 18:25:20,757 | INFO     | zombie collector waiting for pid 2223913
[2025-10-13 20:25:52] 2025-10-13 18:25:20,757 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 20:25:52] 2025-10-13 18:25:20,757 | INFO     | collected zombie processes
[2025-10-13 20:25:52] 2025-10-13 18:25:20,758 | INFO     | will attempt to kill all subprocesses of pid=2223913
[2025-10-13 20:25:52] 2025-10-13 18:25:20,835 | INFO     | process IDs to be killed: [2223913] (in reverse order)
[2025-10-13 20:25:52] 2025-10-13 18:25:20,874 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 20:25:52] 2025-10-13 18:25:20,874 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 20:25:52] 2025-10-13 18:25:20,878 | INFO     | did not find any defunct processes belonging to 2223913
[2025-10-13 20:25:52] 2025-10-13 18:25:20,881 | INFO     | did not find any defunct processes belonging to 2223913
[2025-10-13 20:25:52] 2025-10-13 18:25:20,881 | INFO     | ready for new job
[2025-10-13 20:25:52] 2025-10-13 18:25:20,881 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 20:25:52] 2025-10-13 18:25:20,883 | INFO     | ***************************************
[2025-10-13 20:25:52] 2025-10-13 18:25:20,883 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 20:25:52] 2025-10-13 18:25:20,883 | INFO     | ***************************************
[2025-10-13 20:25:52] 2025-10-13 18:25:20,883 | INFO     | 
[2025-10-13 20:25:52] 2025-10-13 18:25:20,884 | INFO     | architecture information:
[2025-10-13 20:25:52] 2025-10-13 18:25:20,884 | INFO     | executing command: cat /etc/os-release
[2025-10-13 20:25:52] 2025-10-13 18:25:20,897 | INFO     | cat /etc/os-release:
[2025-10-13 20:25:52] NAME="CentOS Linux"
[2025-10-13 20:25:52] VERSION="7 (Core)"
[2025-10-13 20:25:52] ID="centos"
[2025-10-13 20:25:52] ID_LIKE="rhel fedora"
[2025-10-13 20:25:52] VERSION_ID="7"
[2025-10-13 20:25:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 20:25:52] ANSI_COLOR="0;31"
[2025-10-13 20:25:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 20:25:52] HOME_URL="https://www.centos.org/"
[2025-10-13 20:25:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 20:25:52] 
[2025-10-13 20:25:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 20:25:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 20:25:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 20:25:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 20:25:52] 
[2025-10-13 20:25:52] 2025-10-13 18:25:20,897 | INFO     | ***************************************
[2025-10-13 20:25:52] 2025-10-13 18:25:21,400 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-13 20:25:52] 2025-10-13 18:25:21,413 | INFO     | sufficient remaining disk space (234170089472 B)
[2025-10-13 20:25:52] 2025-10-13 18:25:21,414 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 20:25:52] 2025-10-13 18:25:21,414 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 20:25:52] 2025-10-13 18:25:21,414 | INFO     | update_server=False
[2025-10-13 20:25:52] 2025-10-13 18:25:21,414 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 20:25:52] 2025-10-13 18:25:21,414 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 20:25:52] 2025-10-13 18:25:21,415 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 20:25:52] 2025-10-13 18:25:21,415 | INFO     | aborting loop
[2025-10-13 20:25:52] 2025-10-13 18:25:22,089 | INFO     | all job control threads have been joined
[2025-10-13 20:25:52] 2025-10-13 18:25:22,289 | INFO     | all data control threads have been joined
[2025-10-13 20:25:52] 2025-10-13 18:25:22,417 | INFO     | [job] retrieve thread has finished
[2025-10-13 20:25:52] 2025-10-13 18:25:22,420 | INFO     | [job] queue monitor thread has finished
[2025-10-13 20:25:52] 2025-10-13 18:25:22,421 | INFO     | [job] job monitor thread has finished
[2025-10-13 20:25:52] 2025-10-13 18:25:22,431 | INFO     | [data] copytool_in thread has finished
[2025-10-13 20:25:52] 2025-10-13 18:25:22,781 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 20:25:52] 2025-10-13 18:25:22,824 | INFO     | [job] validate thread has finished
[2025-10-13 20:25:52] 2025-10-13 18:25:22,866 | INFO     | all payload control threads have been joined
[2025-10-13 20:25:52] 2025-10-13 18:25:22,989 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 20:25:52] 2025-10-13 18:25:23,048 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 20:25:52] 2025-10-13 18:25:23,095 | INFO     | [job] control thread has finished
[2025-10-13 20:25:52] 2025-10-13 18:25:23,116 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 20:25:52] 2025-10-13 18:25:23,264 | INFO     | [payload] validate_post thread has finished
[2025-10-13 20:25:52] 2025-10-13 18:25:23,295 | INFO     | [data] control thread has finished
[2025-10-13 20:25:52] 2025-10-13 18:25:23,709 | INFO     | [payload] failed_post thread has finished
[2025-10-13 20:25:52] 2025-10-13 18:25:23,812 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 20:25:52] 2025-10-13 18:25:23,871 | INFO     | [payload] control thread has finished
[2025-10-13 20:25:52] 2025-10-13 18:25:24,786 | INFO     | [data] copytool_out thread has finished
[2025-10-13 20:25:52] 2025-10-13 18:25:26,995 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 20:25:52] 2025-10-13 18:25:31,717 | INFO     | job.realtimelogging is not enabled
[2025-10-13 20:25:52] 2025-10-13 18:25:32,252 | INFO     | [monitor] cgroup control has ended
[2025-10-13 20:25:52] 2025-10-13 18:25:32,722 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 20:25:52] 2025-10-13 18:25:34,466 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139643374176064)>', '<ExcThread(monitor, started 139642833708800)>']
[2025-10-13 20:25:52] 2025-10-13 18:25:39,490 | INFO     | all workflow threads have been joined
[2025-10-13 20:25:52] 2025-10-13 18:25:39,490 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 20:25:52] 2025-10-13 18:25:39,491 | INFO     | traces error code: 0
[2025-10-13 20:25:52] 2025-10-13 18:25:39,491 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 20:25:52] 2025-10-13 18:25:52,134 | INFO     | PID=2216497 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 20:25:52] 2025-10-13 18:25:52,135 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 20:25:52] 2025-10-13 18:25:52,135 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 20:25:52] 2025-10-13 18:25:52,135 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 20:25:52] 2025-10-13 18:25:52,135 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 20:25:52] 2025-10-13 18:25:52,135 | INFO     | [monitor] control thread has ended
[2025-10-13 20:25:52] 2025-10-13 18:25:52,223 [wrapper] ==== pilot stdout END ====
[2025-10-13 20:25:52] 2025-10-13 18:25:52,225 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 20:25:52] 2025-10-13 18:25:52,227 [wrapper] pilotpid: 2216497
[2025-10-13 20:25:52] 2025-10-13 18:25:52,229 [wrapper] Pilot exit status: 0
[2025-10-13 20:25:52] 2025-10-13 18:25:52,237 [wrapper] pandaids: 6840853871
[2025-10-13 20:25:52] 2025-10-13 18:25:52,258 [wrapper] cleanup supervisor_pilot 2236153 2216498
[2025-10-13 20:25:52] 2025-10-13 18:25:52,260 [wrapper] Test setup, not cleaning
[2025-10-13 20:25:52] 2025-10-13 18:25:52,262 [wrapper] apfmon messages muted
[2025-10-13 20:25:52] 2025-10-13 18:25:52,264 [wrapper] ==== wrapper stdout END ====
[2025-10-13 20:25:52] 2025-10-13 18:25:52,266 [wrapper] ==== wrapper stderr END ====
[2025-10-13 20:25:52]  *** Error codes and diagnostics ***
[2025-10-13 20:25:52]     "exeErrorCode": 0,
[2025-10-13 20:25:52]     "exeErrorDiag": "",
[2025-10-13 20:25:52]     "pilotErrorCode": 0,
[2025-10-13 20:25:52]     "pilotErrorDiag": "",
[2025-10-13 20:25:52]  *** Listing of results directory ***
[2025-10-13 20:25:52] total 414540
[2025-10-13 20:25:52] -rw-r--r-- 1 boinc boinc    557409 Oct 12 23:57 pilot3.tar.gz
[2025-10-13 20:25:52] -rw-r--r-- 1 boinc boinc      5112 Oct 13 00:46 queuedata.json
[2025-10-13 20:25:52] -rwx------ 1 boinc boinc     36292 Oct 13 00:46 runpilot2-wrapper.sh
[2025-10-13 20:25:52] -rw-r--r-- 1 boinc boinc       100 Oct 13 19:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 20:25:52] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 19:36 run_atlas
[2025-10-13 20:25:52] -rw-r--r-- 1 boinc boinc       105 Oct 13 19:36 job.xml
[2025-10-13 20:25:52] -rw-r--r-- 1 boinc boinc      6533 Oct 13 19:36 init_data.xml
[2025-10-13 20:25:52] -rw-r--r-- 2 boinc boinc 221097303 Oct 13 19:36 EVNT.46676267._004631.pool.root.1
[2025-10-13 20:25:52] -rw-r--r-- 2 boinc boinc     15120 Oct 13 19:36 start_atlas.sh
[2025-10-13 20:25:52] drwxrwx--x 2 boinc boinc        68 Oct 13 19:36 shared
[2025-10-13 20:25:52] -rw-r--r-- 2 boinc boinc    569685 Oct 13 19:36 input.tar.gz
[2025-10-13 20:25:52] -rw-r--r-- 1 boinc boinc         0 Oct 13 19:36 boinc_lockfile
[2025-10-13 20:25:52] -rw-r--r-- 1 boinc boinc      2549 Oct 13 19:36 pandaJob.out
[2025-10-13 20:25:52] -rw------- 1 boinc boinc    972791 Oct 13 19:36 agis_schedconf.cvmfs.json
[2025-10-13 20:25:52] -rw------- 1 boinc boinc   1560580 Oct 13 19:36 agis_ddmendpoints.agis.ALL.json
[2025-10-13 20:25:52] drwx------ 5 boinc boinc      4096 Oct 13 19:36 pilot3
[2025-10-13 20:25:52] -rw------- 1 boinc boinc 197888338 Oct 13 20:24 HITS.46676269._091494.pool.root.1
[2025-10-13 20:25:52] -rw-r--r-- 1 boinc boinc       529 Oct 13 20:24 boinc_task_state.xml
[2025-10-13 20:25:52] -rw------- 1 boinc boinc      1015 Oct 13 20:25 memory_monitor_summary.json
[2025-10-13 20:25:52] -rw------- 1 boinc boinc    364015 Oct 13 20:25 log.46676269._091494.job.log.tgz.1
[2025-10-13 20:25:52] -rw------- 1 boinc boinc      7795 Oct 13 20:25 heartbeat.json
[2025-10-13 20:25:52] -rw-r--r-- 1 boinc boinc      8192 Oct 13 20:25 boinc_mmap_file
[2025-10-13 20:25:52] -rw-r--r-- 1 boinc boinc        27 Oct 13 20:25 wrapper_checkpoint.txt
[2025-10-13 20:25:52] -rw------- 1 boinc boinc        95 Oct 13 20:25 pilot_heartbeat.json
[2025-10-13 20:25:52] -rw------- 1 boinc boinc       747 Oct 13 20:25 pilotlog.txt
[2025-10-13 20:25:52] -rw------- 1 boinc boinc    449271 Oct 13 20:25 log.46676269._091494.job.log.1
[2025-10-13 20:25:52] -rw------- 1 boinc boinc       357 Oct 13 20:25 output.list
[2025-10-13 20:25:52] -rw-r--r-- 1 boinc boinc       620 Oct 13 20:25 runtime_log
[2025-10-13 20:25:52] -rw------- 1 boinc boinc    829440 Oct 13 20:25 result.tar.gz
[2025-10-13 20:25:52] -rw-r--r-- 1 boinc boinc      8727 Oct 13 20:25 runtime_log.err
[2025-10-13 20:25:52] -rw------- 1 boinc boinc       655 Oct 13 20:25 iTmNDmm0JS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhulNDmH5pa2n.diag
[2025-10-13 20:25:52] -rw-r--r-- 1 boinc boinc     22392 Oct 13 20:25 stderr.txt
[2025-10-13 20:25:52] HITS file was successfully produced:
[2025-10-13 20:25:52] -rw------- 1 boinc boinc 197888338 Oct 13 20:24 shared/HITS.pool.root.1
[2025-10-13 20:25:52]  *** Contents of shared directory: ***
[2025-10-13 20:25:52] total 410556
[2025-10-13 20:25:52] -rw-r--r-- 2 boinc boinc 221097303 Oct 13 19:36 ATLAS.root_0
[2025-10-13 20:25:52] -rw-r--r-- 2 boinc boinc     15120 Oct 13 19:36 start_atlas.sh
[2025-10-13 20:25:52] -rw-r--r-- 2 boinc boinc    569685 Oct 13 19:36 input.tar.gz
[2025-10-13 20:25:52] -rw------- 1 boinc boinc 197888338 Oct 13 20:24 HITS.pool.root.1
[2025-10-13 20:25:52] -rw------- 1 boinc boinc    829440 Oct 13 20:25 result.tar.gz
20:25:54 (2212680): run_atlas exited; CPU time 30442.211038
20:25:54 (2212680): called boinc_finish(0)

</stderr_txt>
]]>

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