Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:00:59 (2815645): wrapper (7.7.26015): starting
00:00:59 (2815645): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 00:01:00] Arguments: --nthreads 8
[2025-10-13 00:01:00] Threads: 8
[2025-10-13 00:01:00] Checking for CVMFS
[2025-10-13 00:01:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:01:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:01:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:01:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:01:01] 2.13.2.0 1266553 130175 526676 151647 3 829 23974254 32935937 22803 16776704 0 285623083 99.614 287540615 22202 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:01:01] CVMFS is ok
[2025-10-13 00:01:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:01:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:01:01] Further information can be found at the LHC@home message board.
[2025-10-13 00:01:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:01:01] Checking for apptainer binary...
[2025-10-13 00:01:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:01:01] Running /usr/bin/apptainer --version
[2025-10-13 00:01:01] apptainer version 1.4.3-1.el9
[2025-10-13 00:01:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:01:02] c7-13-32.aglt2.org
[2025-10-13 00:01:02] apptainer works
[2025-10-13 00:01:02] Set ATHENA_PROC_NUMBER=8
[2025-10-13 00:01:02] Set ATHENA_CORE_NUMBER=8
[2025-10-13 00:01:02] Starting ATLAS job with PandaID=6840852520
[2025-10-13 00:01:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:01:20]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:01:20] 2025-10-13 07:00:38,612 | INFO     | PID=2826577 has CPU usage=9.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 03:01:20] 2025-10-13 07:00:38,612 | INFO     | .. there are 31 such processes running
[2025-10-13 03:01:20] 2025-10-13 07:00:39,351 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 03:01:20] 2025-10-13 07:00:39,355 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3284.298359374999
[2025-10-13 03:01:20] 2025-10-13 07:00:39,368 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6840852520/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 03:01:20] 2025-10-13 07:00:39,369 | INFO     | extracted standard info from prmon json
[2025-10-13 03:01:20] 2025-10-13 07:00:39,369 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 03:01:20] 2025-10-13 07:00:39,369 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 03:01:20] 2025-10-13 07:00:39,391 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 03:01:20] 2025-10-13 07:00:39,391 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 03:01:20] 2025-10-13 07:00:39,394 | INFO     | fitting pss+swap vs Time
[2025-10-13 03:01:20] 2025-10-13 07:00:39,394 | INFO     | sum of square deviations: 1633531750.0287356
[2025-10-13 03:01:20] 2025-10-13 07:00:39,420 | INFO     | sum of deviations: 55895031449.568954
[2025-10-13 03:01:20] 2025-10-13 07:00:39,421 | INFO     | mean x: 1760333495.0747128
[2025-10-13 03:01:20] 2025-10-13 07:00:39,421 | INFO     | mean y: 2085081.8793103448
[2025-10-13 03:01:20] 2025-10-13 07:00:39,421 | INFO     | -- intersect: -60231758592.84562
[2025-10-13 03:01:20] 2025-10-13 07:00:39,421 | INFO     | intersect: -60231758592.84562
[2025-10-13 03:01:20] 2025-10-13 07:00:39,421 | INFO     | chi2: 1.660539121308063
[2025-10-13 03:01:20] 2025-10-13 07:00:39,421 | INFO     | sum of square deviations: 1496718537.3254426
[2025-10-13 03:01:20] 2025-10-13 07:00:39,422 | INFO     | sum of deviations: 54196422535.78701
[2025-10-13 03:01:20] 2025-10-13 07:00:39,422 | INFO     | mean x: 1760333342.5739646
[2025-10-13 03:01:20] 2025-10-13 07:00:39,422 | INFO     | mean y: 2083169.49704142
[2025-10-13 03:01:20] 2025-10-13 07:00:39,422 | INFO     | -- intersect: -63739874492.398705
[2025-10-13 03:01:20] 2025-10-13 07:00:39,422 | INFO     | intersect: -63739874492.398705
[2025-10-13 03:01:20] 2025-10-13 07:00:39,423 | INFO     | chi2: 1.6523661191552794
[2025-10-13 03:01:20] 2025-10-13 07:00:39,423 | INFO     | current chi2=1.6523661191552794 (change=0.49218967791287815 %)
[2025-10-13 03:01:20] 2025-10-13 07:00:39,423 | INFO     | right removable region: 168
[2025-10-13 03:01:20] 2025-10-13 07:00:39,423 | INFO     | sum of square deviations: 1496689380.8284092
[2025-10-13 03:01:20] 2025-10-13 07:00:39,424 | INFO     | sum of deviations: 28683193253.443775
[2025-10-13 03:01:20] 2025-10-13 07:00:39,424 | INFO     | mean x: 1760333647.591716
[2025-10-13 03:01:20] 2025-10-13 07:00:39,480 | INFO     | mean y: 2115135.74556213
[2025-10-13 03:01:20] 2025-10-13 07:00:39,480 | INFO     | -- intersect: -33733669223.508556
[2025-10-13 03:01:20] 2025-10-13 07:00:39,480 | INFO     | intersect: -33733669223.508556
[2025-10-13 03:01:20] 2025-10-13 07:00:39,481 | INFO     | chi2: 0.06743849479770046
[2025-10-13 03:01:20] 2025-10-13 07:00:39,481 | INFO     | current chi2=0.06743849479770046 (change=95.93875904925522 %)
[2025-10-13 03:01:20] 2025-10-13 07:00:39,481 | INFO     | sum of square deviations: 1367718177.2378016
[2025-10-13 03:01:20] 2025-10-13 07:00:39,482 | INFO     | sum of deviations: 25398231874.756092
[2025-10-13 03:01:20] 2025-10-13 07:00:39,482 | INFO     | mean x: 1760333800.1036584
[2025-10-13 03:01:20] 2025-10-13 07:00:39,482 | INFO     | mean y: 2119034.073170732
[2025-10-13 03:01:20] 2025-10-13 07:00:39,482 | INFO     | -- intersect: -32686900367.786953
[2025-10-13 03:01:20] 2025-10-13 07:00:39,482 | INFO     | intersect: -32686900367.786953
[2025-10-13 03:01:20] 2025-10-13 07:00:39,482 | INFO     | chi2: 0.06315066041939806
[2025-10-13 03:01:20] 2025-10-13 07:00:39,483 | INFO     | current chi2=0.06315066041939806 (change=6.358140689772061 %)
[2025-10-13 03:01:20] 2025-10-13 07:00:39,483 | INFO     | left removable region: 20
[2025-10-13 03:01:20] 2025-10-13 07:00:39,483 | INFO     | sum of square deviations: 1005164670.5608102
[2025-10-13 03:01:20] 2025-10-13 07:00:39,483 | INFO     | sum of deviations: 20068710950.92568
[2025-10-13 03:01:20] 2025-10-13 07:00:39,484 | INFO     | mean x: 1760333922.1283784
[2025-10-13 03:01:20] 2025-10-13 07:00:39,484 | INFO     | mean y: 2123349.8986486485
[2025-10-13 03:01:20] 2025-10-13 07:00:39,484 | INFO     | -- intersect: -35143991207.22505
[2025-10-13 03:01:20] 2025-10-13 07:00:39,484 | INFO     | intersect: -35143991207.22505
[2025-10-13 03:01:20] 2025-10-13 07:00:39,496 | INFO     | chi2: 0.054227509065661664
[2025-10-13 03:01:20] 2025-10-13 07:00:39,496 | INFO     | -- intersect: -35143991207.22505
[2025-10-13 03:01:20] 2025-10-13 07:00:39,497 | INFO     | current memory leak: 19.97 B/s (using 148 data points, chi2=0.05)
[2025-10-13 03:01:20] 2025-10-13 07:00:39,497 | INFO     | could have reported an average CPU frequency of 3286 MHz (9 samples)
[2025-10-13 03:01:20] 2025-10-13 07:00:39,497 | INFO     | ..............................
[2025-10-13 03:01:20] 2025-10-13 07:00:39,497 | INFO     | . Timing measurements:
[2025-10-13 03:01:20] 2025-10-13 07:00:39,497 | INFO     | . get job = 0 s
[2025-10-13 03:01:20] 2025-10-13 07:00:39,497 | INFO     | . initial setup = 4 s
[2025-10-13 03:01:20] 2025-10-13 07:00:39,497 | INFO     | . payload setup = 39 s
[2025-10-13 03:01:20] 2025-10-13 07:00:39,497 | INFO     | . stage-in = 0 s
[2025-10-13 03:01:20] 2025-10-13 07:00:39,498 | INFO     | . payload execution = 10619 s
[2025-10-13 03:01:20] 2025-10-13 07:00:39,498 | INFO     | . stage-out = 0 s
[2025-10-13 03:01:20] 2025-10-13 07:00:39,498 | INFO     | . log creation = 0 s
[2025-10-13 03:01:20] 2025-10-13 07:00:39,498 | INFO     | ..............................
[2025-10-13 03:01:20] 2025-10-13 07:00:39,626 | INFO     | time since job start (10725s) is within the limit (172800.0s)
[2025-10-13 03:01:20] 2025-10-13 07:00:39,871 | INFO     | 
[2025-10-13 03:01:20] 2025-10-13 07:00:39,871 | INFO     | job summary report
[2025-10-13 03:01:20] 2025-10-13 07:00:39,871 | INFO     | --------------------------------------------------
[2025-10-13 03:01:20] 2025-10-13 07:00:39,871 | INFO     | PanDA job id: 6840852520
[2025-10-13 03:01:20] 2025-10-13 07:00:39,871 | INFO     | task id: 46676269
[2025-10-13 03:01:20] 2025-10-13 07:00:39,872 | INFO     | errors: (none)
[2025-10-13 03:01:20] 2025-10-13 07:00:39,872 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 03:01:20] 2025-10-13 07:00:39,873 | INFO     | pilot state: finished 
[2025-10-13 03:01:20] 2025-10-13 07:00:39,873 | INFO     | transexitcode: 0
[2025-10-13 03:01:20] 2025-10-13 07:00:39,873 | INFO     | exeerrorcode: 0
[2025-10-13 03:01:20] 2025-10-13 07:00:39,873 | INFO     | exeerrordiag: 
[2025-10-13 03:01:20] 2025-10-13 07:00:39,873 | INFO     | exitcode: 0
[2025-10-13 03:01:20] 2025-10-13 07:00:39,873 | INFO     | exitmsg: OK
[2025-10-13 03:01:20] 2025-10-13 07:00:39,873 | INFO     | cpuconsumptiontime: 32576 s
[2025-10-13 03:01:20] 2025-10-13 07:00:39,873 | INFO     | nevents: 400
[2025-10-13 03:01:20] 2025-10-13 07:00:39,873 | INFO     | neventsw: 0
[2025-10-13 03:01:20] 2025-10-13 07:00:39,873 | INFO     | pid: 2862770
[2025-10-13 03:01:20] 2025-10-13 07:00:39,873 | INFO     | pgrp: 2862770
[2025-10-13 03:01:20] 2025-10-13 07:00:39,873 | INFO     | corecount: 8
[2025-10-13 03:01:20] 2025-10-13 07:00:39,873 | INFO     | event service: False
[2025-10-13 03:01:20] 2025-10-13 07:00:39,873 | INFO     | sizes: {0: 2348630, 1: 2348885, 2: 2348913, 13: 2348913, 23: 2349259, 34: 2349259, 10663: 2378066, 10666: 2387064, 10667: 2387120, 10679: 2387378}
[2025-10-13 03:01:20] 2025-10-13 07:00:39,873 | INFO     | --------------------------------------------------
[2025-10-13 03:01:20] 2025-10-13 07:00:39,874 | INFO     | 
[2025-10-13 03:01:20] 2025-10-13 07:00:39,874 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-13 03:01:20] 2025-10-13 07:00:40,056 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 03:01:20] 2025-10-13 07:00:40,057 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 03:01:20] 2025-10-13 07:00:40,057 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 03:01:20] 2025-10-13 07:00:40,057 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 03:01:20] 2025-10-13 07:00:40,057 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 03:01:20] 2025-10-13 07:00:40,057 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 03:01:20] 2025-10-13 07:00:40,057 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 03:01:20] 2025-10-13 07:00:40,057 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 03:01:20] 2025-10-13 07:00:40,057 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 03:01:20] 2025-10-13 07:00:40,057 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 03:01:20] 2025-10-13 07:00:40,057 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 03:01:20] 2025-10-13 07:00:40,058 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 03:01:20] 2025-10-13 07:00:40,058 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 03:01:20] 2025-10-13 07:00:40,058 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 03:01:20] 2025-10-13 07:00:40,058 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 03:01:20] 2025-10-13 07:00:40,058 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 03:01:20] 2025-10-13 07:00:40,058 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 03:01:20] 2025-10-13 07:00:40,058 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 03:01:20] 2025-10-13 07:00:40,058 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 03:01:20] 2025-10-13 07:00:40,058 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 03:01:20] 2025-10-13 07:00:40,058 | INFO     | job 6840852520 has completed (purged errors)
[2025-10-13 03:01:20] 2025-10-13 07:00:40,058 | INFO     | overall cleanup function is called
[2025-10-13 03:01:20] 2025-10-13 07:00:41,086 | INFO     | --- collectZombieJob: --- 10, [2862770]
[2025-10-13 03:01:20] 2025-10-13 07:00:41,086 | INFO     | zombie collector waiting for pid 2862770
[2025-10-13 03:01:20] 2025-10-13 07:00:41,086 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 03:01:20] 2025-10-13 07:00:41,087 | INFO     | collected zombie processes
[2025-10-13 03:01:20] 2025-10-13 07:00:41,087 | INFO     | will attempt to kill all subprocesses of pid=2862770
[2025-10-13 03:01:20] 2025-10-13 07:00:42,623 | INFO     | process IDs to be killed: [2862770] (in reverse order)
[2025-10-13 03:01:20] 2025-10-13 07:00:42,792 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 03:01:20] 2025-10-13 07:00:42,793 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 03:01:20] 2025-10-13 07:00:42,811 | INFO     | did not find any defunct processes belonging to 2862770
[2025-10-13 03:01:20] 2025-10-13 07:00:42,828 | INFO     | did not find any defunct processes belonging to 2862770
[2025-10-13 03:01:20] 2025-10-13 07:00:42,828 | INFO     | ready for new job
[2025-10-13 03:01:20] 2025-10-13 07:00:42,828 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 03:01:20] 2025-10-13 07:00:42,830 | INFO     | ***************************************
[2025-10-13 03:01:20] 2025-10-13 07:00:42,831 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 03:01:20] 2025-10-13 07:00:42,831 | INFO     | ***************************************
[2025-10-13 03:01:20] 2025-10-13 07:00:42,831 | INFO     | 
[2025-10-13 03:01:20] 2025-10-13 07:00:42,852 | INFO     | architecture information:
[2025-10-13 03:01:20] 2025-10-13 07:00:42,853 | INFO     | executing command: cat /etc/os-release
[2025-10-13 03:01:20] 2025-10-13 07:00:42,897 | INFO     | cat /etc/os-release:
[2025-10-13 03:01:20] NAME="CentOS Linux"
[2025-10-13 03:01:20] VERSION="7 (Core)"
[2025-10-13 03:01:20] ID="centos"
[2025-10-13 03:01:20] ID_LIKE="rhel fedora"
[2025-10-13 03:01:20] VERSION_ID="7"
[2025-10-13 03:01:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 03:01:20] ANSI_COLOR="0;31"
[2025-10-13 03:01:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 03:01:20] HOME_URL="https://www.centos.org/"
[2025-10-13 03:01:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 03:01:20] 
[2025-10-13 03:01:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 03:01:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 03:01:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 03:01:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 03:01:20] 
[2025-10-13 03:01:20] 2025-10-13 07:00:42,897 | INFO     | ***************************************
[2025-10-13 03:01:20] 2025-10-13 07:00:43,401 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-13 03:01:20] 2025-10-13 07:00:43,432 | INFO     | sufficient remaining disk space (93636788224 B)
[2025-10-13 03:01:20] 2025-10-13 07:00:43,432 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 03:01:20] 2025-10-13 07:00:43,432 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 03:01:20] 2025-10-13 07:00:43,432 | INFO     | update_server=False
[2025-10-13 03:01:20] 2025-10-13 07:00:43,433 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 03:01:20] 2025-10-13 07:00:43,468 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:01:20] 2025-10-13 07:00:43,930 | INFO     | all payload control threads have been joined
[2025-10-13 03:01:20] 2025-10-13 07:00:43,971 | INFO     | all job control threads have been joined
[2025-10-13 03:01:20] 2025-10-13 07:00:44,348 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:01:20] 2025-10-13 07:00:44,348 | INFO     | aborting loop
[2025-10-13 03:01:20] 2025-10-13 07:00:44,360 | INFO     | all data control threads have been joined
[2025-10-13 03:01:20] 2025-10-13 07:00:44,438 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:01:20] 2025-10-13 07:00:44,513 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:01:20] 2025-10-13 07:00:44,627 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 03:01:20] 2025-10-13 07:00:44,678 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:01:20] 2025-10-13 07:00:44,785 | INFO     | [job] validate thread has finished
[2025-10-13 03:01:20] 2025-10-13 07:00:44,811 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:01:20] 2025-10-13 07:00:44,916 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:01:20] 2025-10-13 07:00:44,938 | INFO     | [payload] control thread has finished
[2025-10-13 03:01:20] 2025-10-13 07:00:44,979 | INFO     | [job] control thread has finished
[2025-10-13 03:01:20] 2025-10-13 07:00:45,229 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:01:20] 2025-10-13 07:00:45,354 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:01:20] 2025-10-13 07:00:45,368 | INFO     | [data] control thread has finished
[2025-10-13 03:01:20] 2025-10-13 07:00:45,381 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:01:20] 2025-10-13 07:00:45,388 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:01:20] 2025-10-13 07:00:45,730 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:01:20] 2025-10-13 07:00:45,922 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:01:20] 2025-10-13 07:00:46,633 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:01:20] 2025-10-13 07:00:47,480 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:01:20] 2025-10-13 07:01:12,484 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:01:20] 2025-10-13 07:01:13,594 | INFO     | PID=2826577 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 03:01:20] 2025-10-13 07:01:13,594 | INFO     | .. there are 31 such processes running
[2025-10-13 03:01:20] 2025-10-13 07:01:13,596 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:01:20] 2025-10-13 07:01:13,596 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:01:20] 2025-10-13 07:01:13,596 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:01:20] 2025-10-13 07:01:13,918 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140145413842752)>', '<ExcThread(monitor, started 140145141454592)>']
[2025-10-13 03:01:20] 2025-10-13 07:01:14,600 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:01:20] 2025-10-13 07:01:14,600 | INFO     | [monitor] control thread has ended
[2025-10-13 03:01:20] 2025-10-13 07:01:18,944 | INFO     | all workflow threads have been joined
[2025-10-13 03:01:20] 2025-10-13 07:01:18,944 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:01:20] 2025-10-13 07:01:18,945 | INFO     | traces error code: 0
[2025-10-13 03:01:20] 2025-10-13 07:01:18,945 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:01:20] 2025-10-13 07:01:19,298 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:01:20] 2025-10-13 07:01:19,358 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:01:20] 2025-10-13 07:01:19,401 [wrapper] pilotpid: 2826577
[2025-10-13 03:01:20] 2025-10-13 07:01:19,462 [wrapper] Pilot exit status: 0
[2025-10-13 03:01:20] 2025-10-13 07:01:19,665 [wrapper] pandaids: 6840852520
[2025-10-13 03:01:20] 2025-10-13 07:01:19,861 [wrapper] cleanup supervisor_pilot 3350311 2826578
[2025-10-13 03:01:20] 2025-10-13 07:01:19,905 [wrapper] Test setup, not cleaning
[2025-10-13 03:01:20] 2025-10-13 07:01:19,986 [wrapper] apfmon messages muted
[2025-10-13 03:01:20] 2025-10-13 07:01:20,043 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:01:20] 2025-10-13 07:01:20,048 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:01:20]  *** Error codes and diagnostics ***
[2025-10-13 03:01:20]     "exeErrorCode": 0,
[2025-10-13 03:01:20]     "exeErrorDiag": "",
[2025-10-13 03:01:20]     "pilotErrorCode": 0,
[2025-10-13 03:01:20]     "pilotErrorDiag": "",
[2025-10-13 03:01:20]  *** Listing of results directory ***
[2025-10-13 03:01:20] total 414900
[2025-10-13 03:01:20] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 17:57 pilot3.tar.gz
[2025-10-13 03:01:20] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 18:41 queuedata.json
[2025-10-13 03:01:20] -rwx------. 1 boincer umatlas     36292 Oct 12 18:42 runpilot2-wrapper.sh
[2025-10-13 03:01:20] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:01:20] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:00 run_atlas
[2025-10-13 03:01:20] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:00 job.xml
[2025-10-13 03:01:20] -rw-r--r--. 2 boincer umatlas 220979871 Oct 13 00:00 EVNT.46676267._004625.pool.root.1
[2025-10-13 03:01:20] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:00 shared
[2025-10-13 03:01:20] -rw-r--r--. 2 boincer umatlas    569682 Oct 13 00:00 input.tar.gz
[2025-10-13 03:01:20] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:00 start_atlas.sh
[2025-10-13 03:01:20] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:00 boinc_lockfile
[2025-10-13 03:01:20] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:01 pandaJob.out
[2025-10-13 03:01:20] -rw-------. 1 boincer umatlas    974373 Oct 13 00:01 agis_schedconf.cvmfs.json
[2025-10-13 03:01:20] -rw-------. 1 boincer umatlas   1560580 Oct 13 00:01 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:01:20] drwx------. 5 boincer umatlas      4096 Oct 13 00:01 pilot3
[2025-10-13 03:01:20] -rw-r--r--. 1 boincer umatlas      6898 Oct 13 02:56 init_data.xml
[2025-10-13 03:01:20] -rw-------. 1 boincer umatlas 196502624 Oct 13 02:59 HITS.46676269._091349.pool.root.1
[2025-10-13 03:01:20] -rw-r--r--. 1 boincer umatlas       531 Oct 13 02:59 boinc_task_state.xml
[2025-10-13 03:01:20] -rw-------. 1 boincer umatlas      1034 Oct 13 03:00 memory_monitor_summary.json
[2025-10-13 03:01:20] -rw-------. 1 boincer umatlas    410589 Oct 13 03:00 log.46676269._091349.job.log.tgz.1
[2025-10-13 03:01:20] -rw-------. 1 boincer umatlas      7787 Oct 13 03:00 heartbeat.json
[2025-10-13 03:01:20] -rw-------. 1 boincer umatlas        95 Oct 13 03:01 pilot_heartbeat.json
[2025-10-13 03:01:20] -rw-------. 1 boincer umatlas      4824 Oct 13 03:01 pilotlog.txt
[2025-10-13 03:01:20] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 03:01 boinc_mmap_file
[2025-10-13 03:01:20] -rw-r--r--. 1 boincer umatlas        27 Oct 13 03:01 wrapper_checkpoint.txt
[2025-10-13 03:01:20] -rw-------. 1 boincer umatlas   1324226 Oct 13 03:01 log.46676269._091349.job.log.1
[2025-10-13 03:01:20] -rw-------. 1 boincer umatlas       357 Oct 13 03:01 output.list
[2025-10-13 03:01:20] -rw-r--r--. 1 boincer umatlas       620 Oct 13 03:01 runtime_log
[2025-10-13 03:01:20] -rw-------. 1 boincer umatlas   1751040 Oct 13 03:01 result.tar.gz
[2025-10-13 03:01:20] -rw-r--r--. 1 boincer umatlas      8704 Oct 13 03:01 runtime_log.err
[2025-10-13 03:01:20] -rw-------. 1 boincer umatlas       655 Oct 13 03:01 HOVMDmKxJS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmfCVMDmsQRhBn.diag
[2025-10-13 03:01:20] -rw-r--r--. 1 boincer umatlas     21069 Oct 13 03:01 stderr.txt
[2025-10-13 03:01:20] HITS file was successfully produced:
[2025-10-13 03:01:20] -rw-------. 1 boincer umatlas 196502624 Oct 13 02:59 shared/HITS.pool.root.1
[2025-10-13 03:01:20]  *** Contents of shared directory: ***
[2025-10-13 03:01:20] total 410000
[2025-10-13 03:01:20] -rw-r--r--. 2 boincer umatlas 220979871 Oct 13 00:00 ATLAS.root_0
[2025-10-13 03:01:20] -rw-r--r--. 2 boincer umatlas    569682 Oct 13 00:00 input.tar.gz
[2025-10-13 03:01:20] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:00 start_atlas.sh
[2025-10-13 03:01:20] -rw-------. 1 boincer umatlas 196502624 Oct 13 02:59 HITS.pool.root.1
[2025-10-13 03:01:20] -rw-------. 1 boincer umatlas   1751040 Oct 13 03:01 result.tar.gz
03:01:22 (2815645): run_atlas exited; CPU time 32727.233499
03:01:22 (2815645): called boinc_finish(0)

</stderr_txt>
]]>

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