Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:53:04 (530249): wrapper (7.7.26015): starting
20:53:04 (530249): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 20:53:04] Arguments: --nthreads 12
[2025-10-12 20:53:04] Threads: 12
[2025-10-12 20:53:04] Checking for CVMFS
[2025-10-12 20:53:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:53:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:53:05] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:53:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:53:05] 2.11.5.0 2896 32379 217912 151647 2 370 24812436 45568000 16150 130560 0 307400344 99.858 136035088 29114 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-12 20:53:05] CVMFS is ok
[2025-10-12 20:53:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:53:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:53:05] Further information can be found at the LHC@home message board.
[2025-10-12 20:53:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:53:05] Checking for apptainer binary...
[2025-10-12 20:53:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:53:05] Running /usr/bin/apptainer --version
[2025-10-12 20:53:06] apptainer version 1.4.1-1.el9
[2025-10-12 20:53:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:53:06] wns0093.triumf.lcg
[2025-10-12 20:53:06] apptainer works
[2025-10-12 20:53:06] Set ATHENA_PROC_NUMBER=12
[2025-10-12 20:53:06] Set ATHENA_CORE_NUMBER=12
[2025-10-12 20:53:06] Starting ATLAS job with PandaID=6841070155
[2025-10-12 20:53:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:57:35]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:57:35] 2025-10-13 03:56:50,342 | WARNING  | wrong length of table data, x=[1760327652.0], y=[1351.0] (must be same and length>=4)
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | could have reported an average CPU frequency of 2593 MHz (4 samples)
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | ..............................
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | . Timing measurements:
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | . get job = 0 s
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | . initial setup = 3 s
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | . payload setup = 10 s
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | . stage-in = 0 s
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | . payload execution = 36 s
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | . stage-out = 1 s
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | . log creation = 0 s
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | ..............................
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6841070155/pilotlog.txt
[2025-10-12 20:57:35] 2025-10-13 03:56:50,370 | INFO     | time since job start (201s) is within the limit (172800.0s)
[2025-10-12 20:57:35] 2025-10-13 03:56:50,394 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-12 20:57:35] - Log from pilotlog.txt -
[2025-10-12 20:57:35] 2025-10-13 03:56:50,341 | INFO     | extracted standard info from prmon json
[2025-10-12 20:57:35] 2025-10-13 03:56:50,341 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 20:57:35] 2025-10-13 03:56:50,341 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 20:57:35] 2025-10-13 03:56:50,342 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 20:57:35] 2025-10-13 03:56:50,342 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 20:57:35] 2025-10-13 03:56:50,342 | WARNING  | wrong length of table data, x=[1760327652.0], y=[1351.0] (must be same and length>=4)
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | could have reported an average CPU frequency of 2593 MHz (4 samples)
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | ..............................
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | . Timing measurements:
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | . get job = 0 s
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | . initial setup = 3 s
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | . payload setup = 10 s
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | . stage-in = 0 s
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | . payload execution = 36 s
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | . stage-out = 1 s
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | . log creation = 0 s
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | ..............................
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6841070155/pilotlog.txt
[2025-10-12 20:57:35] 2025-10-13 03:56:50,370 | INFO     | time since job start (201s) is within the limit (172800.0s)
[2025-10-12 20:57:35] 2025-10-13 03:56:50,395 | WARNING  | 
[2025-10-12 20:57:35] [begin log extracts]
[2025-10-12 20:57:35] - Log from pilotlog.txt -
[2025-10-12 20:57:35] 2025-10-13 03:56:50,341 | INFO     | extracted standard info from prmon json
[2025-10-12 20:57:35] 2025-10-13 03:56:50,341 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 20:57:35] 2025-10-13 03:56:50,341 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 20:57:35] 2025-10-13 03:56:50,342 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 20:57:35] 2025-10-13 03:56:50,342 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 20:57:35] 2025-10-13 03:56:50,342 | WARNING  | wrong length of table data, x=[1760327652.0], y=[1351.0] (must be same and length>=4)
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | could have reported an average CPU frequency of 2593 MHz (4 samples)
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | ..............................
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | . Timing measurements:
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | . get job = 0 s
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | . initial setup = 3 s
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | . payload setup = 10 s
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | . stage-in = 0 s
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | . payload execution = 36 s
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | . stage-out = 1 s
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | . log creation = 0 s
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | ..............................
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 20:57:35] 2025-10-13 03:56:50,343 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6841070155/pilotlog.txt
[2025-10-12 20:57:35] 2025-10-13 03:56:50,370 | INFO     | time since job start (201s) is within the limit (172800.0s)
[2025-10-12 20:57:35] [end log extracts]
[2025-10-12 20:57:35] 2025-10-13 03:56:50,395 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-12 20:57:35] 2025-10-13 03:56:50,396 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-12 20:57:35] 2025-10-13 03:56:50,999 | INFO     | 
[2025-10-12 20:57:35] 2025-10-13 03:56:50,999 | INFO     | job summary report
[2025-10-12 20:57:35] 2025-10-13 03:56:50,999 | INFO     | --------------------------------------------------
[2025-10-12 20:57:35] 2025-10-13 03:56:51,000 | INFO     | PanDA job id: 6841070155
[2025-10-12 20:57:35] 2025-10-13 03:56:51,000 | INFO     | task id: 46676269
[2025-10-12 20:57:35] 2025-10-13 03:56:51,000 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-12 20:54:34,602 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-12 20:57:35] 2025-10-13 03:56:51,000 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 20:57:35] 2025-10-13 03:56:51,000 | INFO     | pilot state: failed 
[2025-10-12 20:57:35] 2025-10-13 03:56:51,000 | INFO     | transexitcode: 65
[2025-10-12 20:57:35] 2025-10-13 03:56:51,000 | INFO     | exeerrorcode: 65
[2025-10-12 20:57:35] 2025-10-13 03:56:51,000 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 20:57:35] 2025-10-13 03:56:51,000 | INFO     | exitcode: 65
[2025-10-12 20:57:35] 2025-10-13 03:56:51,000 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 20:57:35] 2025-10-13 03:56:51,000 | INFO     | cpuconsumptiontime: 18 s
[2025-10-12 20:57:35] 2025-10-13 03:56:51,000 | INFO     | nevents: 0
[2025-10-12 20:57:35] 2025-10-13 03:56:51,000 | INFO     | neventsw: 0
[2025-10-12 20:57:35] 2025-10-13 03:56:51,000 | INFO     | pid: 541431
[2025-10-12 20:57:35] 2025-10-13 03:56:51,000 | INFO     | pgrp: 541431
[2025-10-12 20:57:35] 2025-10-13 03:56:51,000 | INFO     | corecount: 12
[2025-10-12 20:57:35] 2025-10-13 03:56:51,000 | INFO     | event service: False
[2025-10-12 20:57:35] 2025-10-13 03:56:51,000 | INFO     | sizes: {0: 2348682, 1: 2348881, 10: 2349143, 12: 2349171, 51: 2372632, 53: 2377080, 179: 2377218}
[2025-10-12 20:57:35] 2025-10-13 03:56:51,000 | INFO     | --------------------------------------------------
[2025-10-12 20:57:35] 2025-10-13 03:56:51,000 | INFO     | 
[2025-10-12 20:57:35] 2025-10-13 03:56:51,001 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-12 20:57:35] 2025-10-13 03:56:51,048 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 20:57:35] 2025-10-13 03:56:51,048 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 20:57:35] 2025-10-13 03:56:51,048 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 20:57:35] 2025-10-13 03:56:51,048 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 20:57:35] 2025-10-13 03:56:51,048 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 20:57:35] 2025-10-13 03:56:51,048 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 20:57:35] 2025-10-13 03:56:51,049 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 20:57:35] 2025-10-13 03:56:51,049 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 20:57:35] 2025-10-13 03:56:51,049 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 20:57:35] 2025-10-13 03:56:51,049 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 20:57:35] 2025-10-13 03:56:51,049 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 20:57:35] 2025-10-13 03:56:51,049 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 20:57:35] 2025-10-13 03:56:51,049 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 20:57:35] 2025-10-13 03:56:51,049 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 20:57:35] 2025-10-13 03:56:51,049 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 20:57:35] 2025-10-13 03:56:51,049 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 20:57:35] 2025-10-13 03:56:51,049 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 20:57:35] 2025-10-13 03:56:51,049 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 20:57:35] 2025-10-13 03:56:51,049 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 20:57:35] 2025-10-13 03:56:51,049 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 20:57:35] 2025-10-13 03:56:51,049 | INFO     | job 6841070155 has completed (purged errors)
[2025-10-12 20:57:35] 2025-10-13 03:56:51,050 | INFO     | overall cleanup function is called
[2025-10-12 20:57:35] 2025-10-13 03:56:51,747 | INFO     | PID=534213 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 20:57:35] 2025-10-13 03:56:51,747 | INFO     | .. there are 28 such processes running
[2025-10-12 20:57:35] 2025-10-13 03:56:52,057 | INFO     | --- collectZombieJob: --- 10, [541431]
[2025-10-12 20:57:35] 2025-10-13 03:56:52,057 | INFO     | zombie collector waiting for pid 541431
[2025-10-12 20:57:35] 2025-10-13 03:56:52,058 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 20:57:35] 2025-10-13 03:56:52,058 | INFO     | collected zombie processes
[2025-10-12 20:57:35] 2025-10-13 03:56:52,058 | INFO     | will attempt to kill all subprocesses of pid=541431
[2025-10-12 20:57:35] 2025-10-13 03:56:52,277 | INFO     | process IDs to be killed: [541431] (in reverse order)
[2025-10-12 20:57:35] 2025-10-13 03:56:52,364 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 20:57:35] 2025-10-13 03:56:52,365 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 20:57:35] 2025-10-13 03:56:52,421 | INFO     | did not find any defunct processes belonging to 541431
[2025-10-12 20:57:35] 2025-10-13 03:56:52,447 | INFO     | did not find any defunct processes belonging to 541431
[2025-10-12 20:57:35] 2025-10-13 03:56:52,467 | INFO     | ready for new job
[2025-10-12 20:57:35] 2025-10-13 03:56:52,467 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 20:57:35] 2025-10-13 03:56:52,469 | INFO     | ***************************************
[2025-10-12 20:57:35] 2025-10-13 03:56:52,469 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 20:57:35] 2025-10-13 03:56:52,471 | INFO     | ***************************************
[2025-10-12 20:57:35] 2025-10-13 03:56:52,471 | INFO     | 
[2025-10-12 20:57:35] 2025-10-13 03:56:52,473 | INFO     | architecture information:
[2025-10-12 20:57:35] 2025-10-13 03:56:52,484 | INFO     | executing command: cat /etc/os-release
[2025-10-12 20:57:35] 2025-10-13 03:56:52,537 | INFO     | cat /etc/os-release:
[2025-10-12 20:57:35] NAME="CentOS Linux"
[2025-10-12 20:57:35] VERSION="7 (Core)"
[2025-10-12 20:57:35] ID="centos"
[2025-10-12 20:57:35] ID_LIKE="rhel fedora"
[2025-10-12 20:57:35] VERSION_ID="7"
[2025-10-12 20:57:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 20:57:35] ANSI_COLOR="0;31"
[2025-10-12 20:57:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 20:57:35] HOME_URL="https://www.centos.org/"
[2025-10-12 20:57:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 20:57:35] 
[2025-10-12 20:57:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 20:57:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 20:57:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 20:57:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:57:35] 
[2025-10-12 20:57:35] 2025-10-13 03:56:52,537 | INFO     | ***************************************
[2025-10-12 20:57:35] 2025-10-13 03:56:53,040 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-12 20:57:35] 2025-10-13 03:56:53,057 | INFO     | sufficient remaining disk space (1897480060928 B)
[2025-10-12 20:57:35] 2025-10-13 03:56:53,057 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:57:35] 2025-10-13 03:56:53,057 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:57:35] 2025-10-13 03:56:53,057 | INFO     | update_server=False
[2025-10-12 20:57:35] 2025-10-13 03:56:53,057 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:57:35] 2025-10-13 03:56:53,057 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:57:35] 2025-10-13 03:56:53,061 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:57:35] 2025-10-13 03:56:53,061 | INFO     | aborting loop
[2025-10-12 20:57:35] 2025-10-13 03:56:53,077 | INFO     | all job control threads have been joined
[2025-10-12 20:57:35] 2025-10-13 03:56:53,139 | INFO     | all payload control threads have been joined
[2025-10-12 20:57:35] 2025-10-13 03:56:53,618 | INFO     | all data control threads have been joined
[2025-10-12 20:57:35] 2025-10-13 03:56:54,063 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:57:35] 2025-10-13 03:56:54,067 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:57:35] 2025-10-13 03:56:54,076 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:57:35] 2025-10-13 03:56:54,083 | INFO     | [job] control thread has finished
[2025-10-12 20:57:35] 2025-10-13 03:56:54,124 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:57:35] 2025-10-13 03:56:54,145 | INFO     | [payload] control thread has finished
[2025-10-12 20:57:35] 2025-10-13 03:56:54,625 | INFO     | [data] control thread has finished
[2025-10-12 20:57:35] 2025-10-13 03:56:54,928 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:57:35] 2025-10-13 03:56:54,942 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:57:35] 2025-10-13 03:56:54,950 | INFO     | [job] validate thread has finished
[2025-10-12 20:57:35] 2025-10-13 03:56:54,976 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:57:35] 2025-10-13 03:56:55,064 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:57:35] 2025-10-13 03:56:55,280 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:57:35] 2025-10-13 03:56:55,443 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:57:35] 2025-10-13 03:56:55,551 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:57:35] 2025-10-13 03:56:56,444 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:57:35] 2025-10-13 03:56:56,556 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:57:35] 2025-10-13 03:57:00,452 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:57:35] 2025-10-13 03:57:24,187 | INFO     | PID=534213 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 20:57:35] 2025-10-13 03:57:24,187 | INFO     | .. there are 27 such processes running
[2025-10-12 20:57:35] 2025-10-13 03:57:24,187 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:57:35] 2025-10-13 03:57:24,187 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:57:35] 2025-10-13 03:57:24,187 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:57:35] 2025-10-13 03:57:28,936 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:57:35] 2025-10-13 03:57:30,027 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140391437363008)>', '<ExcThread(monitor, started 140391047218944)>']
[2025-10-12 20:57:35] 2025-10-13 03:57:30,223 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:57:35] 2025-10-13 03:57:30,223 | INFO     | [monitor] control thread has ended
[2025-10-12 20:57:35] 2025-10-13 03:57:35,053 | INFO     | all workflow threads have been joined
[2025-10-12 20:57:35] 2025-10-13 03:57:35,055 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:57:35] 2025-10-13 03:57:35,055 | INFO     | traces error code: 0
[2025-10-12 20:57:35] 2025-10-13 03:57:35,055 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:57:35] 2025-10-13 03:57:35,219 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:57:35] 2025-10-13 03:57:35,235 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:57:35] 2025-10-13 03:57:35,237 [wrapper] pilotpid: 534213
[2025-10-12 20:57:35] 2025-10-13 03:57:35,239 [wrapper] Pilot exit status: 0
[2025-10-12 20:57:35] 2025-10-13 03:57:35,336 [wrapper] pandaids: 6841070155
[2025-10-12 20:57:35] 2025-10-13 03:57:35,436 [wrapper] cleanup supervisor_pilot  534219 534214
[2025-10-12 20:57:35] 2025-10-13 03:57:35,456 [wrapper] Test setup, not cleaning
[2025-10-12 20:57:35] 2025-10-13 03:57:35,460 [wrapper] apfmon messages muted
[2025-10-12 20:57:35] 2025-10-13 03:57:35,478 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:57:35] 2025-10-13 03:57:35,481 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:57:35]  *** Error codes and diagnostics ***
[2025-10-12 20:57:35]     "exeErrorCode": 65,
[2025-10-12 20:57:35]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 20:57:35]     "pilotErrorCode": 1305,
[2025-10-12 20:57:35]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 20:57:35]  *** Listing of results directory ***
[2025-10-12 20:57:35] total 219544
[2025-10-12 20:57:35] -rw-r--r--. 1 boinc boinc    557409 Oct 12 17:48 pilot3.tar.gz
[2025-10-12 20:57:35] -rw-r--r--. 1 boinc boinc      5112 Oct 12 18:12 queuedata.json
[2025-10-12 20:57:35] -rwx------. 1 boinc boinc     36292 Oct 12 18:15 runpilot2-wrapper.sh
[2025-10-12 20:57:35] -rw-r--r--. 1 boinc boinc       100 Oct 12 20:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:57:35] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 20:53 run_atlas
[2025-10-12 20:57:35] -rw-r--r--. 1 boinc boinc       105 Oct 12 20:53 job.xml
[2025-10-12 20:57:35] -rw-r--r--. 1 boinc boinc      6594 Oct 12 20:53 init_data.xml
[2025-10-12 20:57:35] -rw-r--r--. 2 boinc boinc 220684730 Oct 12 20:53 EVNT.46676267._004725.pool.root.1
[2025-10-12 20:57:35] -rw-r--r--. 2 boinc boinc     15120 Oct 12 20:53 start_atlas.sh
[2025-10-12 20:57:35] drwxrwx--x. 2 boinc boinc      4096 Oct 12 20:53 shared
[2025-10-12 20:57:35] -rw-r--r--. 2 boinc boinc    569681 Oct 12 20:53 input.tar.gz
[2025-10-12 20:57:35] -rw-r--r--. 1 boinc boinc         0 Oct 12 20:53 boinc_lockfile
[2025-10-12 20:57:35] -rw-r--r--. 1 boinc boinc      2549 Oct 12 20:53 pandaJob.out
[2025-10-12 20:57:35] -rw-------. 1 boinc boinc    974373 Oct 12 20:53 agis_schedconf.cvmfs.json
[2025-10-12 20:57:35] -rw-------. 1 boinc boinc   1560580 Oct 12 20:53 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:57:35] drwx------. 5 boinc boinc      4096 Oct 12 20:53 pilot3
[2025-10-12 20:57:35] -rw-------. 1 boinc boinc       978 Oct 12 20:54 memory_monitor_summary.json
[2025-10-12 20:57:35] -rw-------. 1 boinc boinc     21351 Oct 12 20:54 log.46676269._093960.job.log.tgz.1
[2025-10-12 20:57:35] -rw-------. 1 boinc boinc        95 Oct 12 20:56 pilot_heartbeat.json
[2025-10-12 20:57:35] -rw-------. 1 boinc boinc      8431 Oct 12 20:56 heartbeat.json
[2025-10-12 20:57:35] -rw-r--r--. 1 boinc boinc       523 Oct 12 20:57 boinc_task_state.xml
[2025-10-12 20:57:35] -rw-r--r--. 1 boinc boinc      8192 Oct 12 20:57 boinc_mmap_file
[2025-10-12 20:57:35] -rw-r--r--. 1 boinc boinc        22 Oct 12 20:57 wrapper_checkpoint.txt
[2025-10-12 20:57:35] -rw-------. 1 boinc boinc      4822 Oct 12 20:57 pilotlog.txt
[2025-10-12 20:57:35] -rw-------. 1 boinc boinc     88510 Oct 12 20:57 log.46676269._093960.job.log.1
[2025-10-12 20:57:35] -rw-------. 1 boinc boinc       188 Oct 12 20:57 output.list
[2025-10-12 20:57:35] -rw-r--r--. 1 boinc boinc       620 Oct 12 20:57 runtime_log
[2025-10-12 20:57:35] -rw-------. 1 boinc boinc    133120 Oct 12 20:57 result.tar.gz
[2025-10-12 20:57:35] -rw-r--r--. 1 boinc boinc      8528 Oct 12 20:57 runtime_log.err
[2025-10-12 20:57:35] -rw-------. 1 boinc boinc       645 Oct 12 20:57 d2gNDmqKMS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmLRVMDmX4Bx3m.diag
[2025-10-12 20:57:35] -rw-r--r--. 1 boinc boinc     21824 Oct 12 20:57 stderr.txt
[2025-10-12 20:57:35] No HITS result produced
[2025-10-12 20:57:35]  *** Contents of shared directory: ***
[2025-10-12 20:57:35] total 216228
[2025-10-12 20:57:35] -rw-r--r--. 2 boinc boinc 220684730 Oct 12 20:53 ATLAS.root_0
[2025-10-12 20:57:35] -rw-r--r--. 2 boinc boinc     15120 Oct 12 20:53 start_atlas.sh
[2025-10-12 20:57:35] -rw-r--r--. 2 boinc boinc    569681 Oct 12 20:53 input.tar.gz
[2025-10-12 20:57:35] -rw-------. 1 boinc boinc    133120 Oct 12 20:57 result.tar.gz
20:57:36 (530249): run_atlas exited; CPU time 25.390372
20:57:36 (530249): called boinc_finish(0)

</stderr_txt>
]]>

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