Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:06:17 (661990): wrapper (7.7.26015): starting
16:06:17 (661990): wrapper: running run_atlas (--nthreads 6)
[2025-10-13 16:06:17] Arguments: --nthreads 6
[2025-10-13 16:06:17] Threads: 6
[2025-10-13 16:06:17] Checking for CVMFS
[2025-10-13 16:06:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 16:06:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 16:06:17] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 16:06:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 16:06:17] 2.11.5.0 3651556 5417 76272 151652 3 57 38839329 52428801 1858 130560 0 17047504 99.998 183289 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-13 16:06:17] CVMFS is ok
[2025-10-13 16:06:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 16:06:17] Checking for apptainer binary...
[2025-10-13 16:06:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 16:06:17] Running /usr/bin/apptainer --version
[2025-10-13 16:06:17] apptainer version 1.3.5-1.el9
[2025-10-13 16:06:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 16:06:17] testio008
[2025-10-13 16:06:17] apptainer works
[2025-10-13 16:06:17] Set ATHENA_PROC_NUMBER=6
[2025-10-13 16:06:17] Set ATHENA_CORE_NUMBER=6
[2025-10-13 16:06:17] Starting ATLAS job with PandaID=6840852390
[2025-10-13 16:06:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 17:11:40]  *** The last 200 lines of the pilot log: ***
[2025-10-13 17:11:40]  lfn=log.46676269._091219.job.log.tgz.1
[2025-10-13 17:11:40]  mtime=0
[2025-10-13 17:11:40]  protocol_id=None
[2025-10-13 17:11:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 17:11:40]  replicas=None
[2025-10-13 17:11:40]  scope=mc23_13p6TeV
[2025-10-13 17:11:40]  status=None
[2025-10-13 17:11:40]  status_code=0
[2025-10-13 17:11:40]  storage_token=
[2025-10-13 17:11:40]  surl=/var/lib/boinc/slots/2/PanDA_Pilot-6840852390/log.46676269._091219.job.log.tgz.1
[2025-10-13 17:11:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/60/84/log.46676269._091219.job.log.tgz.1
[2025-10-13 17:11:40]  workdir=None
[2025-10-13 17:11:40] ]
[2025-10-13 17:11:40] 2025-10-13 08:10:57,286 | INFO     | transferring file log.46676269._091219.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-6840852390/log.46676269._091219.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-13 17:11:40] 2025-10-13 08:10:57,286 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-6840852390/log.46676269._091219.job.log.tgz.1 /var/lib/boinc/slots/2/log.46676269._091219.job
[2025-10-13 17:11:40] 2025-10-13 08:10:57,294 | INFO     | adding to output.list: log.46676269._091219.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/60/84/log.46676269._091219.job.log.tg
[2025-10-13 17:11:40] 2025-10-13 08:10:57,294 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 17:11:40] 2025-10-13 08:10:57,294 | INFO     | summary of transferred files:
[2025-10-13 17:11:40] 2025-10-13 08:10:57,294 | INFO     |  -- lfn=log.46676269._091219.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 17:11:40] 2025-10-13 08:10:57,294 | INFO     | stage-out finished correctly
[2025-10-13 17:11:40] 2025-10-13 08:10:57,338 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 17:11:40] 2025-10-13 08:10:58,497 | INFO     | job 6840852390 has state=finished
[2025-10-13 17:11:40] 2025-10-13 08:10:58,497 | INFO     | preparing for final server update for job 6840852390 in state='finished'
[2025-10-13 17:11:40] 2025-10-13 08:10:58,497 | INFO     | this job has now completed (state=finished)
[2025-10-13 17:11:40] 2025-10-13 08:10:58,497 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 17:11:40] 2025-10-13 08:10:58,498 | INFO     | log transfer has been attempted: DONE
[2025-10-13 17:11:40] 2025-10-13 08:10:58,498 | INFO     | job 6840852390 has finished - writing final server update
[2025-10-13 17:11:40] 2025-10-13 08:10:58,498 | INFO     | total number of processed events: 400 (read)
[2025-10-13 17:11:40] 2025-10-13 08:10:58,498 | INFO     | executing command: lscpu
[2025-10-13 17:11:40] 2025-10-13 08:10:58,516 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 17:11:40] 2025-10-13 08:10:58,705 | INFO     | time since job start (3870s) is within the limit (172800.0s)
[2025-10-13 17:11:40] 2025-10-13 08:10:58,705 | INFO     | 3876s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-13 17:11:40] 2025-10-13 08:10:59,278 | INFO     | monitor loop #286: job 0:6840852390 is in state 'finished'
[2025-10-13 17:11:40] 2025-10-13 08:10:59,279 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 17:11:40] 2025-10-13 08:11:00,711 | INFO     | time since job start (3872s) is within the limit (172800.0s)
[2025-10-13 17:11:40] 2025-10-13 08:11:01,685 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 17:11:40] 2025-10-13 08:11:01,687 | INFO     | found 12 cores (12 cores per socket, 1 socket) , CPU MHz: 4075.1261
[2025-10-13 17:11:40] 2025-10-13 08:11:01,688 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6840852390/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 17:11:40] 2025-10-13 08:11:01,689 | INFO     | extracted standard info from prmon json
[2025-10-13 17:11:40] 2025-10-13 08:11:01,689 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 17:11:40] 2025-10-13 08:11:01,689 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 17:11:40] 2025-10-13 08:11:01,689 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 17:11:40] 2025-10-13 08:11:01,689 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 17:11:40] 2025-10-13 08:11:01,690 | INFO     | fitting pss+swap vs Time
[2025-10-13 17:11:40] 2025-10-13 08:11:01,690 | INFO     | sum of square deviations: 57407588.0
[2025-10-13 17:11:40] 2025-10-13 08:11:01,690 | INFO     | sum of deviations: 342142106.99999994
[2025-10-13 17:11:40] 2025-10-13 08:11:01,690 | INFO     | mean x: 1760341218.0
[2025-10-13 17:11:40] 2025-10-13 08:11:01,690 | INFO     | mean y: 2434862.350877193
[2025-10-13 17:11:40] 2025-10-13 08:11:01,690 | INFO     | -- intersect: -10488980547.1498
[2025-10-13 17:11:40] 2025-10-13 08:11:01,690 | INFO     | intersect: -10488980547.1498
[2025-10-13 17:11:40] 2025-10-13 08:11:01,690 | INFO     | chi2: 0.01135615141138275
[2025-10-13 17:11:40] 2025-10-13 08:11:01,690 | INFO     | -- intersect: -10488980547.1498
[2025-10-13 17:11:40] 2025-10-13 08:11:01,690 | INFO     | current memory leak: 5.96 B/s (using 57 data points, chi2=0.01)
[2025-10-13 17:11:40] 2025-10-13 08:11:01,691 | INFO     | could have reported an average CPU frequency of 3701 MHz (6 samples)
[2025-10-13 17:11:40] 2025-10-13 08:11:01,691 | INFO     | ..............................
[2025-10-13 17:11:40] 2025-10-13 08:11:01,691 | INFO     | . Timing measurements:
[2025-10-13 17:11:40] 2025-10-13 08:11:01,691 | INFO     | . get job = 0 s
[2025-10-13 17:11:40] 2025-10-13 08:11:01,691 | INFO     | . initial setup = 5 s
[2025-10-13 17:11:40] 2025-10-13 08:11:01,691 | INFO     | . payload setup = 2 s
[2025-10-13 17:11:40] 2025-10-13 08:11:01,691 | INFO     | . stage-in = 0 s
[2025-10-13 17:11:40] 2025-10-13 08:11:01,691 | INFO     | . payload execution = 3850 s
[2025-10-13 17:11:40] 2025-10-13 08:11:01,691 | INFO     | . stage-out = 0 s
[2025-10-13 17:11:40] 2025-10-13 08:11:01,691 | INFO     | . log creation = 0 s
[2025-10-13 17:11:40] 2025-10-13 08:11:01,691 | INFO     | ..............................
[2025-10-13 17:11:40] 2025-10-13 08:11:02,168 | INFO     | 
[2025-10-13 17:11:40] 2025-10-13 08:11:02,169 | INFO     | job summary report
[2025-10-13 17:11:40] 2025-10-13 08:11:02,169 | INFO     | --------------------------------------------------
[2025-10-13 17:11:40] 2025-10-13 08:11:02,169 | INFO     | PanDA job id: 6840852390
[2025-10-13 17:11:40] 2025-10-13 08:11:02,169 | INFO     | task id: 46676269
[2025-10-13 17:11:40] 2025-10-13 08:11:02,169 | INFO     | errors: (none)
[2025-10-13 17:11:40] 2025-10-13 08:11:02,169 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 17:11:40] 2025-10-13 08:11:02,169 | INFO     | pilot state: finished 
[2025-10-13 17:11:40] 2025-10-13 08:11:02,169 | INFO     | transexitcode: 0
[2025-10-13 17:11:40] 2025-10-13 08:11:02,169 | INFO     | exeerrorcode: 0
[2025-10-13 17:11:40] 2025-10-13 08:11:02,169 | INFO     | exeerrordiag: 
[2025-10-13 17:11:40] 2025-10-13 08:11:02,169 | INFO     | exitcode: 0
[2025-10-13 17:11:40] 2025-10-13 08:11:02,169 | INFO     | exitmsg: OK
[2025-10-13 17:11:40] 2025-10-13 08:11:02,169 | INFO     | cpuconsumptiontime: 20710 s
[2025-10-13 17:11:40] 2025-10-13 08:11:02,169 | INFO     | nevents: 400
[2025-10-13 17:11:40] 2025-10-13 08:11:02,169 | INFO     | neventsw: 0
[2025-10-13 17:11:40] 2025-10-13 08:11:02,169 | INFO     | pid: 672476
[2025-10-13 17:11:40] 2025-10-13 08:11:02,169 | INFO     | pgrp: 672476
[2025-10-13 17:11:40] 2025-10-13 08:11:02,169 | INFO     | corecount: 6
[2025-10-13 17:11:40] 2025-10-13 08:11:02,169 | INFO     | event service: False
[2025-10-13 17:11:40] 2025-10-13 08:11:02,169 | INFO     | sizes: {0: 2348857, 2: 2349119, 11: 2349147, 3856: 2383988, 3861: 2384126}
[2025-10-13 17:11:40] 2025-10-13 08:11:02,169 | INFO     | --------------------------------------------------
[2025-10-13 17:11:40] 2025-10-13 08:11:02,169 | INFO     | 
[2025-10-13 17:11:40] 2025-10-13 08:11:02,169 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-10-13 17:11:40] 2025-10-13 08:11:02,177 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 17:11:40] 2025-10-13 08:11:02,177 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 17:11:40] 2025-10-13 08:11:02,177 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 17:11:40] 2025-10-13 08:11:02,177 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 17:11:40] 2025-10-13 08:11:02,177 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 17:11:40] 2025-10-13 08:11:02,177 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 17:11:40] 2025-10-13 08:11:02,177 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 17:11:40] 2025-10-13 08:11:02,177 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 17:11:40] 2025-10-13 08:11:02,177 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 17:11:40] 2025-10-13 08:11:02,177 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 17:11:40] 2025-10-13 08:11:02,177 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 17:11:40] 2025-10-13 08:11:02,177 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 17:11:40] 2025-10-13 08:11:02,177 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 17:11:40] 2025-10-13 08:11:02,177 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 17:11:40] 2025-10-13 08:11:02,177 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 17:11:40] 2025-10-13 08:11:02,177 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 17:11:40] 2025-10-13 08:11:02,177 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 17:11:40] 2025-10-13 08:11:02,177 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 17:11:40] 2025-10-13 08:11:02,177 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 17:11:40] 2025-10-13 08:11:02,177 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 17:11:40] 2025-10-13 08:11:02,177 | INFO     | job 6840852390 has completed (purged errors)
[2025-10-13 17:11:40] 2025-10-13 08:11:02,178 | INFO     | overall cleanup function is called
[2025-10-13 17:11:40] 2025-10-13 08:11:03,183 | INFO     | --- collectZombieJob: --- 10, [672476]
[2025-10-13 17:11:40] 2025-10-13 08:11:03,184 | INFO     | zombie collector waiting for pid 672476
[2025-10-13 17:11:40] 2025-10-13 08:11:03,184 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 17:11:40] 2025-10-13 08:11:03,184 | INFO     | collected zombie processes
[2025-10-13 17:11:40] 2025-10-13 08:11:03,184 | INFO     | will attempt to kill all subprocesses of pid=672476
[2025-10-13 17:11:40] 2025-10-13 08:11:03,220 | INFO     | process IDs to be killed: [672476] (in reverse order)
[2025-10-13 17:11:40] 2025-10-13 08:11:03,239 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 17:11:40] 2025-10-13 08:11:03,240 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 17:11:40] 2025-10-13 08:11:03,241 | INFO     | did not find any defunct processes belonging to 672476
[2025-10-13 17:11:40] 2025-10-13 08:11:03,243 | INFO     | did not find any defunct processes belonging to 672476
[2025-10-13 17:11:40] 2025-10-13 08:11:03,243 | INFO     | ready for new job
[2025-10-13 17:11:40] 2025-10-13 08:11:03,243 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 17:11:40] 2025-10-13 08:11:03,244 | INFO     | ***************************************
[2025-10-13 17:11:40] 2025-10-13 08:11:03,244 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 17:11:40] 2025-10-13 08:11:03,244 | INFO     | ***************************************
[2025-10-13 17:11:40] 2025-10-13 08:11:03,244 | INFO     | 
[2025-10-13 17:11:40] 2025-10-13 08:11:03,244 | INFO     | architecture information:
[2025-10-13 17:11:40] 2025-10-13 08:11:03,245 | INFO     | executing command: cat /etc/os-release
[2025-10-13 17:11:40] 2025-10-13 08:11:03,251 | INFO     | cat /etc/os-release:
[2025-10-13 17:11:40] NAME="CentOS Linux"
[2025-10-13 17:11:40] VERSION="7 (Core)"
[2025-10-13 17:11:40] ID="centos"
[2025-10-13 17:11:40] ID_LIKE="rhel fedora"
[2025-10-13 17:11:40] VERSION_ID="7"
[2025-10-13 17:11:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 17:11:40] ANSI_COLOR="0;31"
[2025-10-13 17:11:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 17:11:40] HOME_URL="https://www.centos.org/"
[2025-10-13 17:11:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 17:11:40] 
[2025-10-13 17:11:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 17:11:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 17:11:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 17:11:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 17:11:40] 
[2025-10-13 17:11:40] 2025-10-13 08:11:03,251 | INFO     | ***************************************
[2025-10-13 17:11:40] 2025-10-13 08:11:03,754 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-10-13 17:11:40] 2025-10-13 08:11:03,761 | INFO     | sufficient remaining disk space (279768465408 B)
[2025-10-13 17:11:40] 2025-10-13 08:11:03,761 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 17:11:40] 2025-10-13 08:11:03,761 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 17:11:40] 2025-10-13 08:11:03,761 | INFO     | update_server=False
[2025-10-13 17:11:40] 2025-10-13 08:11:03,761 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 17:11:40] 2025-10-13 08:11:03,761 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 17:11:40] 2025-10-13 08:11:03,761 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 17:11:40] 2025-10-13 08:11:03,761 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 17:11:40] 2025-10-13 08:11:03,761 | INFO     | aborting loop
[2025-10-13 17:11:40] 2025-10-13 08:11:04,121 | INFO     | all data control threads have been joined
[2025-10-13 17:11:40] 2025-10-13 08:11:04,622 | INFO     | all job control threads have been joined
[2025-10-13 17:11:40] 2025-10-13 08:11:04,762 | INFO     | [job] retrieve thread has finished
[2025-10-13 17:11:40] 2025-10-13 08:11:04,766 | INFO     | [job] job monitor thread has finished
[2025-10-13 17:11:40] 2025-10-13 08:11:04,808 | INFO     | all payload control threads have been joined
[2025-10-13 17:11:40] 2025-10-13 08:11:04,886 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 17:11:40] 2025-10-13 08:11:04,897 | INFO     | [job] validate thread has finished
[2025-10-13 17:11:40] 2025-10-13 08:11:04,916 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 17:11:40] 2025-10-13 08:11:05,104 | INFO     | [data] copytool_in thread has finished
[2025-10-13 17:11:40] 2025-10-13 08:11:05,126 | INFO     | [data] control thread has finished
[2025-10-13 17:11:40] 2025-10-13 08:11:05,397 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 17:11:40] 2025-10-13 08:11:05,627 | INFO     | [job] control thread has finished
[2025-10-13 17:11:40] 2025-10-13 08:11:05,766 | INFO     | [data] copytool_out thread has finished
[2025-10-13 17:11:40] 2025-10-13 08:11:05,814 | INFO     | [payload] control thread has finished
[2025-10-13 17:11:40] 2025-10-13 08:11:05,944 | INFO     | [payload] validate_post thread has finished
[2025-10-13 17:11:40] 2025-10-13 08:11:06,304 | INFO     | [payload] failed_post thread has finished
[2025-10-13 17:11:40] 2025-10-13 08:11:06,743 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 17:11:40] 2025-10-13 08:11:07,748 | INFO     | [job] queue monitor thread has finished
[2025-10-13 17:11:40] 2025-10-13 08:11:07,766 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 17:11:40] 2025-10-13 08:11:13,918 | INFO     | job.realtimelogging is not enabled
[2025-10-13 17:11:40] 2025-10-13 08:11:14,923 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 17:11:40] 2025-10-13 08:11:33,820 | INFO     | PID=665755 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 17:11:40] 2025-10-13 08:11:33,820 | INFO     | .. there are 3 such processes running
[2025-10-13 17:11:40] 2025-10-13 08:11:33,820 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 17:11:40] 2025-10-13 08:11:33,820 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 17:11:40] 2025-10-13 08:11:33,820 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 17:11:40] 2025-10-13 08:11:34,101 | INFO     | [monitor] cgroup control has ended
[2025-10-13 17:11:40] 2025-10-13 08:11:35,020 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139750044018496)>', '<ExcThread(monitor, started 139749553587968)>']
[2025-10-13 17:11:40] 2025-10-13 08:11:35,829 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 17:11:40] 2025-10-13 08:11:35,830 | INFO     | [monitor] control thread has ended
[2025-10-13 17:11:40] 2025-10-13 08:11:40,045 | INFO     | all workflow threads have been joined
[2025-10-13 17:11:40] 2025-10-13 08:11:40,046 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 17:11:40] 2025-10-13 08:11:40,046 | INFO     | traces error code: 0
[2025-10-13 17:11:40] 2025-10-13 08:11:40,046 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 17:11:40] 2025-10-13 08:11:40,126 [wrapper] ==== pilot stdout END ====
[2025-10-13 17:11:40] 2025-10-13 08:11:40,128 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 17:11:40] 2025-10-13 08:11:40,130 [wrapper] pilotpid: 665755
[2025-10-13 17:11:40] 2025-10-13 08:11:40,131 [wrapper] Pilot exit status: 0
[2025-10-13 17:11:40] 2025-10-13 08:11:40,138 [wrapper] pandaids: 6840852390
[2025-10-13 17:11:40] 2025-10-13 08:11:40,159 [wrapper] cleanup supervisor_pilot  727986 665756
[2025-10-13 17:11:40] 2025-10-13 08:11:40,161 [wrapper] Test setup, not cleaning
[2025-10-13 17:11:40] 2025-10-13 08:11:40,163 [wrapper] apfmon messages muted
[2025-10-13 17:11:40] 2025-10-13 08:11:40,165 [wrapper] ==== wrapper stdout END ====
[2025-10-13 17:11:40] 2025-10-13 08:11:40,167 [wrapper] ==== wrapper stderr END ====
[2025-10-13 17:11:40]  *** Error codes and diagnostics ***
[2025-10-13 17:11:40]     "exeErrorCode": 0,
[2025-10-13 17:11:40]     "exeErrorDiag": "",
[2025-10-13 17:11:40]     "pilotErrorCode": 0,
[2025-10-13 17:11:40]     "pilotErrorDiag": "",
[2025-10-13 17:11:40]  *** Listing of results directory ***
[2025-10-13 17:11:40] total 408660
[2025-10-13 17:11:40] -rw-r--r--. 1 boinc boinc    557409 Oct 13 06:57 pilot3.tar.gz
[2025-10-13 17:11:40] -rwx------. 1 boinc boinc     36292 Oct 13 07:37 runpilot2-wrapper.sh
[2025-10-13 17:11:40] -rw-r--r--. 1 boinc boinc      5112 Oct 13 07:37 queuedata.json
[2025-10-13 17:11:40] -rw-r--r--. 1 boinc boinc       100 Oct 13 16:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 17:11:40] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 16:06 run_atlas
[2025-10-13 17:11:40] -rw-r--r--. 1 boinc boinc       105 Oct 13 16:06 job.xml
[2025-10-13 17:11:40] -rw-r--r--. 1 boinc boinc      9509 Oct 13 16:06 init_data.xml
[2025-10-13 17:11:40] -rw-r--r--. 2 boinc boinc 220486928 Oct 13 16:06 EVNT.46676267._004620.pool.root.1
[2025-10-13 17:11:40] -rw-r--r--. 2 boinc boinc     15120 Oct 13 16:06 start_atlas.sh
[2025-10-13 17:11:40] drwxrwx--x. 2 boinc boinc        68 Oct 13 16:06 shared
[2025-10-13 17:11:40] -rw-r--r--. 2 boinc boinc    569677 Oct 13 16:06 input.tar.gz
[2025-10-13 17:11:40] -rw-r--r--. 1 boinc boinc         0 Oct 13 16:06 boinc_lockfile
[2025-10-13 17:11:40] -rw-r--r--. 1 boinc boinc      2550 Oct 13 16:06 pandaJob.out
[2025-10-13 17:11:40] -rw-------. 1 boinc boinc    972849 Oct 13 16:06 agis_schedconf.cvmfs.json
[2025-10-13 17:11:40] -rw-------. 1 boinc boinc   1560580 Oct 13 16:06 agis_ddmendpoints.agis.ALL.json
[2025-10-13 17:11:40] drwx------. 5 boinc boinc      4096 Oct 13 16:06 pilot3
[2025-10-13 17:11:40] -rw-------. 1 boinc boinc 192344346 Oct 13 17:10 HITS.46676269._091219.pool.root.1
[2025-10-13 17:11:40] -rw-r--r--. 1 boinc boinc       529 Oct 13 17:10 boinc_task_state.xml
[2025-10-13 17:11:40] -rw-------. 1 boinc boinc        95 Oct 13 17:10 pilot_heartbeat.json
[2025-10-13 17:11:40] -rw-------. 1 boinc boinc      1021 Oct 13 17:10 memory_monitor_summary.json
[2025-10-13 17:11:40] -rw-------. 1 boinc boinc    287434 Oct 13 17:10 log.46676269._091219.job.log.tgz.1
[2025-10-13 17:11:40] -rw-------. 1 boinc boinc      7763 Oct 13 17:11 heartbeat.json
[2025-10-13 17:11:40] -rw-r--r--. 1 boinc boinc        27 Oct 13 17:11 wrapper_checkpoint.txt
[2025-10-13 17:11:40] -rw-r--r--. 1 boinc boinc      8192 Oct 13 17:11 boinc_mmap_file
[2025-10-13 17:11:40] -rw-------. 1 boinc boinc      4895 Oct 13 17:11 pilotlog.txt
[2025-10-13 17:11:40] -rw-------. 1 boinc boinc    581684 Oct 13 17:11 log.46676269._091219.job.log.1
[2025-10-13 17:11:40] -rw-------. 1 boinc boinc       357 Oct 13 17:11 output.list
[2025-10-13 17:11:40] -rw-r--r--. 1 boinc boinc       620 Oct 13 17:11 runtime_log
[2025-10-13 17:11:40] -rw-------. 1 boinc boinc    890880 Oct 13 17:11 result.tar.gz
[2025-10-13 17:11:40] -rw-r--r--. 1 boinc boinc      8661 Oct 13 17:11 runtime_log.err
[2025-10-13 17:11:40] -rw-------. 1 boinc boinc       642 Oct 13 17:11 kS8NDmprJS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmyBVMDmPbdrKn.diag
[2025-10-13 17:11:40] -rw-r--r--. 1 boinc boinc     21238 Oct 13 17:11 stderr.txt
[2025-10-13 17:11:40] HITS file was successfully produced:
[2025-10-13 17:11:40] -rw-------. 1 boinc boinc 192344346 Oct 13 17:10 shared/HITS.pool.root.1
[2025-10-13 17:11:40]  *** Contents of shared directory: ***
[2025-10-13 17:11:40] total 404608
[2025-10-13 17:11:40] -rw-r--r--. 2 boinc boinc 220486928 Oct 13 16:06 ATLAS.root_0
[2025-10-13 17:11:40] -rw-r--r--. 2 boinc boinc     15120 Oct 13 16:06 start_atlas.sh
[2025-10-13 17:11:40] -rw-r--r--. 2 boinc boinc    569677 Oct 13 16:06 input.tar.gz
[2025-10-13 17:11:40] -rw-------. 1 boinc boinc 192344346 Oct 13 17:10 HITS.pool.root.1
[2025-10-13 17:11:40] -rw-------. 1 boinc boinc    890880 Oct 13 17:11 result.tar.gz
17:11:41 (661990): run_atlas exited; CPU time 20737.515188
17:11:41 (661990): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN