Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:23:06 (3445497): wrapper (7.7.26015): starting
15:23:06 (3445497): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 15:23:06] Arguments: --nthreads 3
[2025-10-13 15:23:06] Threads: 3
[2025-10-13 15:23:06] Checking for CVMFS
[2025-10-13 15:23:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 15:23:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 15:23:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 15:23:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 15:23:06] 2.9.2.0 1676327 5780 85512 151662 3 56 29718799 36864001 0 130560 0 4660299 99.991 198739 699 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 15:23:06] CVMFS is ok
[2025-10-13 15:23:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 15:23:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 15:23:06] Further information can be found at the LHC@home message board.
[2025-10-13 15:23:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 15:23:06] Checking for apptainer binary...
[2025-10-13 15:23:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 15:23:06] Running /usr/bin/apptainer --version
[2025-10-13 15:23:06] apptainer version 1.4.1-1.1
[2025-10-13 15:23:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 15:23:06] atlasA303a
[2025-10-13 15:23:06] apptainer works
[2025-10-13 15:23:06] Set ATHENA_PROC_NUMBER=3
[2025-10-13 15:23:06] Set ATHENA_CORE_NUMBER=3
[2025-10-13 15:23:06] Starting ATLAS job with PandaID=6840850768
[2025-10-13 15:23:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 16:45:24]  *** The last 200 lines of the pilot log: ***
[2025-10-13 16:45:24] 2025-10-13 14:44:23,675 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:45:24] 2025-10-13 14:44:23,675 | INFO     | aborting loop
[2025-10-13 16:45:24] 2025-10-13 14:44:23,675 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:45:24] 2025-10-13 14:44:23,985 | INFO     | all job control threads have been joined
[2025-10-13 16:45:24] 2025-10-13 14:44:24,004 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 16:45:24] 2025-10-13 14:44:24,211 | INFO     | all data control threads have been joined
[2025-10-13 16:45:24] 2025-10-13 14:44:24,680 | INFO     | [job] job monitor thread has finished
[2025-10-13 16:45:24] 2025-10-13 14:44:24,680 | INFO     | [job] retrieve thread has finished
[2025-10-13 16:45:24] 2025-10-13 14:44:24,681 | INFO     | [job] queue monitor thread has finished
[2025-10-13 16:45:24] 2025-10-13 14:44:24,873 | INFO     | [payload] validate_post thread has finished
[2025-10-13 16:45:24] 2025-10-13 14:44:24,884 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 16:45:24] 2025-10-13 14:44:24,991 | INFO     | [job] control thread has finished
[2025-10-13 16:45:24] 2025-10-13 14:44:25,069 | INFO     | [data] copytool_in thread has finished
[2025-10-13 16:45:24] 2025-10-13 14:44:25,155 | INFO     | all payload control threads have been joined
[2025-10-13 16:45:24] 2025-10-13 14:44:25,217 | INFO     | [data] control thread has finished
[2025-10-13 16:45:24] 2025-10-13 14:44:25,227 | INFO     | [payload] failed_post thread has finished
[2025-10-13 16:45:24] 2025-10-13 14:44:25,348 | INFO     | [job] validate thread has finished
[2025-10-13 16:45:24] 2025-10-13 14:44:25,423 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 16:45:24] 2025-10-13 14:44:25,427 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 16:45:24] 2025-10-13 14:44:25,845 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 16:45:24] 2025-10-13 14:44:26,161 | INFO     | [payload] control thread has finished
[2025-10-13 16:45:24] 2025-10-13 14:44:26,890 | INFO     | [data] copytool_out thread has finished
[2025-10-13 16:45:24] 2025-10-13 14:44:28,011 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 16:45:24] 2025-10-13 14:44:34,664 | INFO     | job.realtimelogging is not enabled
[2025-10-13 16:45:24] 2025-10-13 14:44:35,669 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 16:45:24] 2025-10-13 14:44:53,874 | INFO     | PID=3449214 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 16:45:24] 2025-10-13 14:44:53,874 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 16:45:24] 2025-10-13 14:44:53,875 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 16:45:24] 2025-10-13 14:44:53,875 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 16:45:24] 2025-10-13 14:45:17,932 | INFO     | [monitor] cgroup control has ended
[2025-10-13 16:45:24] 2025-10-13 14:45:19,391 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139867719194432)>', '<ExcThread(monitor, started 139867077994240)>']
[2025-10-13 16:45:24] 2025-10-13 14:45:20,008 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 16:45:24] 2025-10-13 14:45:20,008 | INFO     | [monitor] control thread has ended
[2025-10-13 16:45:24] 2025-10-13 14:45:24,416 | INFO     | all workflow threads have been joined
[2025-10-13 16:45:24] 2025-10-13 14:45:24,417 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 16:45:24] 2025-10-13 14:45:24,417 | INFO     | traces error code: 0
[2025-10-13 16:45:24] 2025-10-13 14:45:24,417 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 16:45:24] 2025-10-13 14:45:24,468 [wrapper] ==== pilot stdout END ====
[2025-10-13 16:45:24] 2025-10-13 14:45:24,471 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 16:45:24] 2025-10-13 14:45:24,474 [wrapper] pilotpid: 3449214
[2025-10-13 16:45:24] 2025-10-13 14:45:24,476 [wrapper] Pilot exit status: 0
[2025-10-13 16:45:24] 2025-10-13 14:45:24,484 [wrapper] pandaids: 6840850768
[2025-10-13 16:45:24] 2025-10-13 14:45:24,502 [wrapper] cleanup supervisor_pilot 3467719 3449215
[2025-10-13 16:45:24] 2025-10-13 14:45:24,505 [wrapper] Test setup, not cleaning
[2025-10-13 16:45:24] 2025-10-13 14:45:24,507 [wrapper] apfmon messages muted
[2025-10-13 16:45:24] 2025-10-13 14:45:24,510 [wrapper] ==== wrapper stdout END ====
[2025-10-13 16:45:24] 2025-10-13 14:45:24,512 [wrapper] ==== wrapper stderr END ====
[2025-10-13 16:45:24]  *** Error codes and diagnostics ***
[2025-10-13 16:45:24]     "exeErrorCode": 0,
[2025-10-13 16:45:24]     "exeErrorDiag": "",
[2025-10-13 16:45:24]     "pilotErrorCode": 0,
[2025-10-13 16:45:24]     "pilotErrorDiag": "",
[2025-10-13 16:45:24]  *** Listing of results directory ***
[2025-10-13 16:45:24] total 415676
[2025-10-13 16:45:24] -rw-r--r-- 1 boinc boinc    557409 Oct 12 23:57 pilot3.tar.gz
[2025-10-13 16:45:24] -rwx------ 1 boinc boinc     36292 Oct 13 00:06 runpilot2-wrapper.sh
[2025-10-13 16:45:24] -rw-r--r-- 1 boinc boinc      5112 Oct 13 00:06 queuedata.json
[2025-10-13 16:45:24] -rw-r--r-- 1 boinc boinc       100 Oct 13 15:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 16:45:24] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 15:23 run_atlas
[2025-10-13 16:45:24] -rw-r--r-- 1 boinc boinc       105 Oct 13 15:23 job.xml
[2025-10-13 16:45:24] -rw-r--r-- 2 boinc boinc 223297019 Oct 13 15:23 EVNT.46676267._004296.pool.root.1
[2025-10-13 16:45:24] -rw-r--r-- 2 boinc boinc    569676 Oct 13 15:23 input.tar.gz
[2025-10-13 16:45:24] -rw-r--r-- 2 boinc boinc     15120 Oct 13 15:23 start_atlas.sh
[2025-10-13 16:45:24] drwxrwx--x 2 boinc boinc      4096 Oct 13 15:23 shared
[2025-10-13 16:45:24] -rw-r--r-- 1 boinc boinc         0 Oct 13 15:23 boinc_setup_complete
[2025-10-13 16:45:24] -rw-r--r-- 1 boinc boinc      6450 Oct 13 15:23 init_data.xml
[2025-10-13 16:45:24] -rw-r--r-- 1 boinc boinc         0 Oct 13 15:23 boinc_lockfile
[2025-10-13 16:45:24] -rw-r--r-- 1 boinc boinc      2550 Oct 13 15:23 pandaJob.out
[2025-10-13 16:45:24] -rw------- 1 boinc boinc    972489 Oct 13 15:23 agis_schedconf.cvmfs.json
[2025-10-13 16:45:24] -rw------- 1 boinc boinc   1560580 Oct 13 15:23 agis_ddmendpoints.agis.ALL.json
[2025-10-13 16:45:24] drwx------ 5 boinc boinc      4096 Oct 13 15:23 pilot3
[2025-10-13 16:45:24] -rw------- 1 boinc boinc 196540107 Oct 13 16:43 HITS.46676269._090716.pool.root.1
[2025-10-13 16:45:24] -rw-r--r-- 1 boinc boinc       529 Oct 13 16:44 boinc_task_state.xml
[2025-10-13 16:45:24] -rw------- 1 boinc boinc      1015 Oct 13 16:44 memory_monitor_summary.json
[2025-10-13 16:45:24] -rw------- 1 boinc boinc    251621 Oct 13 16:44 log.46676269._090716.job.log.tgz.1
[2025-10-13 16:45:24] -rw------- 1 boinc boinc      7759 Oct 13 16:44 heartbeat.json
[2025-10-13 16:45:24] -rw------- 1 boinc boinc        95 Oct 13 16:44 pilot_heartbeat.json
[2025-10-13 16:45:24] -rw-r--r-- 1 boinc boinc      8192 Oct 13 16:45 boinc_mmap_file
[2025-10-13 16:45:24] -rw-r--r-- 1 boinc boinc        27 Oct 13 16:45 wrapper_checkpoint.txt
[2025-10-13 16:45:24] -rw------- 1 boinc boinc      4824 Oct 13 16:45 pilotlog.txt
[2025-10-13 16:45:24] -rw------- 1 boinc boinc    716081 Oct 13 16:45 log.46676269._090716.job.log.1
[2025-10-13 16:45:24] -rw------- 1 boinc boinc       357 Oct 13 16:45 output.list
[2025-10-13 16:45:24] -rw-r--r-- 1 boinc boinc       620 Oct 13 16:45 runtime_log
[2025-10-13 16:45:24] -rw------- 1 boinc boinc    983040 Oct 13 16:45 result.tar.gz
[2025-10-13 16:45:24] -rw-r--r-- 1 boinc boinc      8797 Oct 13 16:45 runtime_log.err
[2025-10-13 16:45:24] -rw------- 1 boinc boinc       662 Oct 13 16:45 pWfKDmVOJS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3nlNDmBvTrVn.diag
[2025-10-13 16:45:24] -rw-r--r-- 1 boinc boinc      7292 Oct 13 16:45 stderr.txt
[2025-10-13 16:45:24] HITS file was successfully produced:
[2025-10-13 16:45:24] -rw------- 1 boinc boinc 196540107 Oct 13 16:43 shared/HITS.pool.root.1
[2025-10-13 16:45:24]  *** Contents of shared directory: ***
[2025-10-13 16:45:24] total 411544
[2025-10-13 16:45:24] -rw-r--r-- 2 boinc boinc 223297019 Oct 13 15:23 ATLAS.root_0
[2025-10-13 16:45:24] -rw-r--r-- 2 boinc boinc    569676 Oct 13 15:23 input.tar.gz
[2025-10-13 16:45:24] -rw-r--r-- 2 boinc boinc     15120 Oct 13 15:23 start_atlas.sh
[2025-10-13 16:45:24] -rw------- 1 boinc boinc 196540107 Oct 13 16:43 HITS.pool.root.1
[2025-10-13 16:45:24] -rw------- 1 boinc boinc    983040 Oct 13 16:45 result.tar.gz
16:45:25 (3445497): run_atlas exited; CPU time 13905.942980
16:45:25 (3445497): called boinc_finish(0)

</stderr_txt>
]]>

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