Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:26:11 (27239): wrapper (7.7.26015): starting
23:26:11 (27239): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 23:26:11] Arguments: --nthreads 8
[2025-10-12 23:26:11] Threads: 8
[2025-10-12 23:26:11] Checking for CVMFS
[2025-10-12 23:26:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 23:26:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 23:26:11] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 23:26:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 23:26:11] 2.11.2.0 8539 53813 134660 151647 1 61 11665865 18432000 1028 130560 0 51232586 99.975 2297857 37379 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 23:26:11] CVMFS is ok
[2025-10-12 23:26:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 23:26:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 23:26:11] Further information can be found at the LHC@home message board.
[2025-10-12 23:26:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 23:26:11] Checking for apptainer binary...
[2025-10-12 23:26:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 23:26:11] Running /usr/bin/apptainer --version
[2025-10-12 23:26:11] apptainer version 1.3.2-1.el7
[2025-10-12 23:26:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 23:26:11] c-206-1.aglt2.org
[2025-10-12 23:26:11] apptainer works
[2025-10-12 23:26:11] Set ATHENA_PROC_NUMBER=8
[2025-10-12 23:26:11] Set ATHENA_CORE_NUMBER=8
[2025-10-12 23:26:11] Starting ATLAS job with PandaID=6840852464
[2025-10-12 23:26:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 02:14:45]  *** The last 200 lines of the pilot log: ***
[2025-10-13 02:14:45] 2025-10-13 06:14:05,968 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 02:14:45] 2025-10-13 06:14:05,968 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 02:14:45] 2025-10-13 06:14:05,970 | INFO     | fitting pss+swap vs Time
[2025-10-13 02:14:45] 2025-10-13 06:14:05,971 | INFO     | sum of square deviations: 1392881930.0
[2025-10-13 02:14:45] 2025-10-13 06:14:05,971 | INFO     | sum of deviations: -4394376377.0
[2025-10-13 02:14:45] 2025-10-13 06:14:05,972 | INFO     | mean x: 1760331008.0
[2025-10-13 02:14:45] 2025-10-13 06:14:05,972 | INFO     | mean y: 2501401.7818181817
[2025-10-13 02:14:45] 2025-10-13 06:14:05,972 | INFO     | -- intersect: 5556135798.6727295
[2025-10-13 02:14:45] 2025-10-13 06:14:05,972 | INFO     | intersect: 5556135798.6727295
[2025-10-13 02:14:45] 2025-10-13 06:14:05,972 | INFO     | chi2: 2.1672007441623364
[2025-10-13 02:14:45] 2025-10-13 06:14:05,973 | INFO     | sum of square deviations: 1270051720.0
[2025-10-13 02:14:45] 2025-10-13 06:14:05,973 | INFO     | sum of deviations: 7290702798.0
[2025-10-13 02:14:45] 2025-10-13 06:14:05,973 | INFO     | mean x: 1760330855.5
[2025-10-13 02:14:45] 2025-10-13 06:14:05,973 | INFO     | mean y: 2515555.0125
[2025-10-13 02:14:45] 2025-10-13 06:14:05,974 | INFO     | -- intersect: -10102623386.572952
[2025-10-13 02:14:45] 2025-10-13 06:14:05,974 | INFO     | intersect: -10102623386.572952
[2025-10-13 02:14:45] 2025-10-13 06:14:05,974 | INFO     | chi2: 1.2930923282443185
[2025-10-13 02:14:45] 2025-10-13 06:14:05,974 | INFO     | current chi2=1.2930923282443185 (change=40.333523245253275 %)
[2025-10-13 02:14:45] 2025-10-13 06:14:05,974 | INFO     | sum of square deviations: 1154663510.0
[2025-10-13 02:14:45] 2025-10-13 06:14:05,975 | INFO     | sum of deviations: 7166076565.0
[2025-10-13 02:14:45] 2025-10-13 06:14:05,975 | INFO     | mean x: 1760330703.0
[2025-10-13 02:14:45] 2025-10-13 06:14:05,975 | INFO     | mean y: 2515390.251612903
[2025-10-13 02:14:45] 2025-10-13 06:14:05,975 | INFO     | -- intersect: -10922454948.005873
[2025-10-13 02:14:45] 2025-10-13 06:14:05,975 | INFO     | intersect: -10922454948.005873
[2025-10-13 02:14:45] 2025-10-13 06:14:05,976 | INFO     | chi2: 1.2940813663966317
[2025-10-13 02:14:45] 2025-10-13 06:14:05,976 | INFO     | current chi2=1.2940813663966317 (change=-0.07648627485525883 %)
[2025-10-13 02:14:45] 2025-10-13 06:14:05,976 | INFO     | right removable region: 154
[2025-10-13 02:14:45] 2025-10-13 06:14:05,976 | INFO     | sum of square deviations: 1270051720.0
[2025-10-13 02:14:45] 2025-10-13 06:14:05,977 | INFO     | sum of deviations: -26414491145.0
[2025-10-13 02:14:45] 2025-10-13 06:14:05,977 | INFO     | mean x: 1760331160.5
[2025-10-13 02:14:45] 2025-10-13 06:14:05,977 | INFO     | mean y: 2528355.925
[2025-10-13 02:14:45] 2025-10-13 06:14:05,977 | INFO     | -- intersect: 36613834115.42181
[2025-10-13 02:14:45] 2025-10-13 06:14:05,977 | INFO     | intersect: 36613834115.42181
[2025-10-13 02:14:45] 2025-10-13 06:14:05,977 | INFO     | chi2: 0.9436927718452421
[2025-10-13 02:14:45] 2025-10-13 06:14:05,978 | INFO     | current chi2=0.9436927718452421 (change=56.45568254868808 %)
[2025-10-13 02:14:45] 2025-10-13 06:14:05,978 | INFO     | sum of square deviations: 1154663510.0
[2025-10-13 02:14:45] 2025-10-13 06:14:05,978 | INFO     | sum of deviations: -25393909478.0
[2025-10-13 02:14:45] 2025-10-13 06:14:05,979 | INFO     | mean x: 1760331313.0
[2025-10-13 02:14:45] 2025-10-13 06:14:05,979 | INFO     | mean y: 2526996.6
[2025-10-13 02:14:45] 2025-10-13 06:14:05,979 | INFO     | -- intersect: 38716571067.855774
[2025-10-13 02:14:45] 2025-10-13 06:14:05,979 | INFO     | intersect: 38716571067.855774
[2025-10-13 02:14:45] 2025-10-13 06:14:05,979 | INFO     | chi2: 0.943482049897464
[2025-10-13 02:14:45] 2025-10-13 06:14:05,979 | INFO     | current chi2=0.943482049897464 (change=0.02232950744829009 %)
[2025-10-13 02:14:45] 2025-10-13 06:14:05,979 | INFO     | left removable region: 20
[2025-10-13 02:14:45] 2025-10-13 06:14:05,980 | INFO     | sum of square deviations: 746051197.5
[2025-10-13 02:14:45] 2025-10-13 06:14:05,980 | INFO     | sum of deviations: -9716621771.499989
[2025-10-13 02:14:45] 2025-10-13 06:14:05,980 | INFO     | mean x: 1760331282.5
[2025-10-13 02:14:45] 2025-10-13 06:14:05,980 | INFO     | mean y: 2537949.3208955224
[2025-10-13 02:14:45] 2025-10-13 06:14:05,981 | INFO     | -- intersect: 22929212850.331287
[2025-10-13 02:14:45] 2025-10-13 06:14:05,981 | INFO     | intersect: 22929212850.331287
[2025-10-13 02:14:45] 2025-10-13 06:14:05,981 | INFO     | chi2: 0.038270472233119766
[2025-10-13 02:14:45] 2025-10-13 06:14:05,981 | INFO     | -- intersect: 22929212850.331287
[2025-10-13 02:14:45] 2025-10-13 06:14:05,981 | INFO     | current memory leak: -13.02 B/s (using 134 data points, chi2=0.04)
[2025-10-13 02:14:45] 2025-10-13 06:14:05,982 | INFO     | could have reported an average CPU frequency of 2403 MHz (9 samples)
[2025-10-13 02:14:45] 2025-10-13 06:14:05,982 | INFO     | ..............................
[2025-10-13 02:14:45] 2025-10-13 06:14:05,982 | INFO     | . Timing measurements:
[2025-10-13 02:14:45] 2025-10-13 06:14:05,982 | INFO     | . get job = 0 s
[2025-10-13 02:14:45] 2025-10-13 06:14:05,982 | INFO     | . initial setup = 2 s
[2025-10-13 02:14:45] 2025-10-13 06:14:05,982 | INFO     | . payload setup = 5 s
[2025-10-13 02:14:45] 2025-10-13 06:14:05,982 | INFO     | . stage-in = 0 s
[2025-10-13 02:14:45] 2025-10-13 06:14:05,982 | INFO     | . payload execution = 10032 s
[2025-10-13 02:14:45] 2025-10-13 06:14:05,982 | INFO     | . stage-out = 0 s
[2025-10-13 02:14:45] 2025-10-13 06:14:05,982 | INFO     | . log creation = 0 s
[2025-10-13 02:14:45] 2025-10-13 06:14:05,983 | INFO     | ..............................
[2025-10-13 02:14:45] 2025-10-13 06:14:06,419 | INFO     | 
[2025-10-13 02:14:45] 2025-10-13 06:14:06,419 | INFO     | job summary report
[2025-10-13 02:14:45] 2025-10-13 06:14:06,419 | INFO     | --------------------------------------------------
[2025-10-13 02:14:45] 2025-10-13 06:14:06,419 | INFO     | PanDA job id: 6840852464
[2025-10-13 02:14:45] 2025-10-13 06:14:06,419 | INFO     | task id: 46676269
[2025-10-13 02:14:45] 2025-10-13 06:14:06,420 | INFO     | errors: (none)
[2025-10-13 02:14:45] 2025-10-13 06:14:06,420 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 02:14:45] 2025-10-13 06:14:06,420 | INFO     | pilot state: finished 
[2025-10-13 02:14:45] 2025-10-13 06:14:06,420 | INFO     | transexitcode: 0
[2025-10-13 02:14:45] 2025-10-13 06:14:06,420 | INFO     | exeerrorcode: 0
[2025-10-13 02:14:45] 2025-10-13 06:14:06,420 | INFO     | exeerrordiag: 
[2025-10-13 02:14:45] 2025-10-13 06:14:06,421 | INFO     | exitcode: 0
[2025-10-13 02:14:45] 2025-10-13 06:14:06,421 | INFO     | exitmsg: OK
[2025-10-13 02:14:45] 2025-10-13 06:14:06,421 | INFO     | cpuconsumptiontime: 76271 s
[2025-10-13 02:14:45] 2025-10-13 06:14:06,421 | INFO     | nevents: 400
[2025-10-13 02:14:45] 2025-10-13 06:14:06,421 | INFO     | neventsw: 0
[2025-10-13 02:14:45] 2025-10-13 06:14:06,421 | INFO     | pid: 12488
[2025-10-13 02:14:45] 2025-10-13 06:14:06,422 | INFO     | pgrp: 12488
[2025-10-13 02:14:45] 2025-10-13 06:14:06,422 | INFO     | corecount: 8
[2025-10-13 02:14:45] 2025-10-13 06:14:06,422 | INFO     | event service: False
[2025-10-13 02:14:45] 2025-10-13 06:14:06,422 | INFO     | sizes: {0: 2348857, 4: 2349119, 11: 2349147, 10041: 2377808, 10042: 2386806, 10044: 2386862, 10049: 2387248}
[2025-10-13 02:14:45] 2025-10-13 06:14:06,422 | INFO     | --------------------------------------------------
[2025-10-13 02:14:45] 2025-10-13 06:14:06,422 | INFO     | 
[2025-10-13 02:14:45] 2025-10-13 06:14:06,423 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 02:14:45] 2025-10-13 06:14:06,441 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 02:14:45] 2025-10-13 06:14:06,441 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 02:14:45] 2025-10-13 06:14:06,441 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 02:14:45] 2025-10-13 06:14:06,441 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 02:14:45] 2025-10-13 06:14:06,442 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 02:14:45] 2025-10-13 06:14:06,442 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 02:14:45] 2025-10-13 06:14:06,442 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 02:14:45] 2025-10-13 06:14:06,442 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 02:14:45] 2025-10-13 06:14:06,442 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 02:14:45] 2025-10-13 06:14:06,443 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 02:14:45] 2025-10-13 06:14:06,443 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 02:14:45] 2025-10-13 06:14:06,443 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 02:14:45] 2025-10-13 06:14:06,443 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 02:14:45] 2025-10-13 06:14:06,443 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 02:14:45] 2025-10-13 06:14:06,444 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 02:14:45] 2025-10-13 06:14:06,444 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 02:14:45] 2025-10-13 06:14:06,444 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 02:14:45] 2025-10-13 06:14:06,444 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 02:14:45] 2025-10-13 06:14:06,444 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 02:14:45] 2025-10-13 06:14:06,444 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 02:14:45] 2025-10-13 06:14:06,445 | INFO     | job 6840852464 has completed (purged errors)
[2025-10-13 02:14:45] 2025-10-13 06:14:06,445 | INFO     | overall cleanup function is called
[2025-10-13 02:14:45] 2025-10-13 06:14:07,453 | INFO     | --- collectZombieJob: --- 10, [12488]
[2025-10-13 02:14:45] 2025-10-13 06:14:07,453 | INFO     | zombie collector waiting for pid 12488
[2025-10-13 02:14:45] 2025-10-13 06:14:07,453 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 02:14:45] 2025-10-13 06:14:07,454 | INFO     | collected zombie processes
[2025-10-13 02:14:45] 2025-10-13 06:14:07,454 | INFO     | will attempt to kill all subprocesses of pid=12488
[2025-10-13 02:14:45] 2025-10-13 06:14:07,575 | INFO     | process IDs to be killed: [12488] (in reverse order)
[2025-10-13 02:14:45] 2025-10-13 06:14:07,630 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 02:14:45] 2025-10-13 06:14:07,630 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 02:14:45] 2025-10-13 06:14:07,633 | INFO     | did not find any defunct processes belonging to 12488
[2025-10-13 02:14:45] 2025-10-13 06:14:07,635 | INFO     | did not find any defunct processes belonging to 12488
[2025-10-13 02:14:45] 2025-10-13 06:14:07,635 | INFO     | ready for new job
[2025-10-13 02:14:45] 2025-10-13 06:14:07,635 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 02:14:45] 2025-10-13 06:14:07,637 | INFO     | ***************************************
[2025-10-13 02:14:45] 2025-10-13 06:14:07,637 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 02:14:45] 2025-10-13 06:14:07,637 | INFO     | ***************************************
[2025-10-13 02:14:45] 2025-10-13 06:14:07,637 | INFO     | 
[2025-10-13 02:14:45] 2025-10-13 06:14:07,638 | INFO     | architecture information:
[2025-10-13 02:14:45] 2025-10-13 06:14:07,638 | INFO     | executing command: cat /etc/os-release
[2025-10-13 02:14:45] 2025-10-13 06:14:07,654 | INFO     | cat /etc/os-release:
[2025-10-13 02:14:45] NAME="CentOS Linux"
[2025-10-13 02:14:45] VERSION="7 (Core)"
[2025-10-13 02:14:45] ID="centos"
[2025-10-13 02:14:45] ID_LIKE="rhel fedora"
[2025-10-13 02:14:45] VERSION_ID="7"
[2025-10-13 02:14:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 02:14:45] ANSI_COLOR="0;31"
[2025-10-13 02:14:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 02:14:45] HOME_URL="https://www.centos.org/"
[2025-10-13 02:14:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 02:14:45] 
[2025-10-13 02:14:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 02:14:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 02:14:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 02:14:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 02:14:45] 
[2025-10-13 02:14:45] 2025-10-13 06:14:07,654 | INFO     | ***************************************
[2025-10-13 02:14:45] 2025-10-13 06:14:08,157 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 02:14:45] 2025-10-13 06:14:08,174 | INFO     | sufficient remaining disk space (28183625728 B)
[2025-10-13 02:14:45] 2025-10-13 06:14:08,174 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 02:14:45] 2025-10-13 06:14:08,174 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 02:14:45] 2025-10-13 06:14:08,174 | INFO     | update_server=False
[2025-10-13 02:14:45] 2025-10-13 06:14:08,174 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 02:14:45] 2025-10-13 06:14:08,175 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 02:14:45] 2025-10-13 06:14:08,175 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 02:14:45] 2025-10-13 06:14:08,175 | INFO     | aborting loop
[2025-10-13 02:14:45] 2025-10-13 06:14:08,355 | INFO     | all data control threads have been joined
[2025-10-13 02:14:45] 2025-10-13 06:14:08,965 | INFO     | all payload control threads have been joined
[2025-10-13 02:14:45] 2025-10-13 06:14:09,179 | INFO     | [job] retrieve thread has finished
[2025-10-13 02:14:45] 2025-10-13 06:14:09,181 | INFO     | [job] job monitor thread has finished
[2025-10-13 02:14:45] 2025-10-13 06:14:09,359 | INFO     | [data] control thread has finished
[2025-10-13 02:14:45] 2025-10-13 06:14:09,467 | INFO     | all job control threads have been joined
[2025-10-13 02:14:45] 2025-10-13 06:14:09,672 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 02:14:45] 2025-10-13 06:14:09,675 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 02:14:45] 2025-10-13 06:14:09,970 | INFO     | [payload] control thread has finished
[2025-10-13 02:14:45] 2025-10-13 06:14:10,180 | INFO     | [data] copytool_out thread has finished
[2025-10-13 02:14:45] 2025-10-13 06:14:10,288 | INFO     | [data] copytool_in thread has finished
[2025-10-13 02:14:45] 2025-10-13 06:14:10,305 | INFO     | [payload] validate_post thread has finished
[2025-10-13 02:14:45] 2025-10-13 06:14:10,449 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 02:14:45] 2025-10-13 06:14:10,472 | INFO     | [job] control thread has finished
[2025-10-13 02:14:45] 2025-10-13 06:14:10,482 | INFO     | [job] validate thread has finished
[2025-10-13 02:14:45] 2025-10-13 06:14:10,539 | INFO     | [payload] failed_post thread has finished
[2025-10-13 02:14:45] 2025-10-13 06:14:11,072 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 02:14:45] 2025-10-13 06:14:11,206 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 02:14:45] 2025-10-13 06:14:12,077 | INFO     | [job] queue monitor thread has finished
[2025-10-13 02:14:45] 2025-10-13 06:14:15,208 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 02:14:45] 2025-10-13 06:14:18,852 | INFO     | job.realtimelogging is not enabled
[2025-10-13 02:14:45] 2025-10-13 06:14:19,857 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 02:14:45] 2025-10-13 06:14:38,051 | INFO     | PID=6001 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 02:14:45] 2025-10-13 06:14:38,051 | INFO     | .. there are 3 such processes running
[2025-10-13 02:14:45] 2025-10-13 06:14:38,051 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 02:14:45] 2025-10-13 06:14:38,051 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 02:14:45] 2025-10-13 06:14:38,051 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 02:14:45] 2025-10-13 06:14:38,378 | INFO     | [monitor] cgroup control has ended
[2025-10-13 02:14:45] 2025-10-13 06:14:40,251 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139662650226496)>', '<ExcThread(monitor, started 139661984913152)>']
[2025-10-13 02:14:45] 2025-10-13 06:14:41,066 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 02:14:45] 2025-10-13 06:14:41,067 | INFO     | [monitor] control thread has ended
[2025-10-13 02:14:45] 2025-10-13 06:14:45,276 | INFO     | all workflow threads have been joined
[2025-10-13 02:14:45] 2025-10-13 06:14:45,276 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 02:14:45] 2025-10-13 06:14:45,276 | INFO     | traces error code: 0
[2025-10-13 02:14:45] 2025-10-13 06:14:45,277 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 02:14:45] 2025-10-13 06:14:45,363 [wrapper] ==== pilot stdout END ====
[2025-10-13 02:14:45] 2025-10-13 06:14:45,365 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 02:14:45] 2025-10-13 06:14:45,368 [wrapper] pilotpid: 6001
[2025-10-13 02:14:45] 2025-10-13 06:14:45,370 [wrapper] Pilot exit status: 0
[2025-10-13 02:14:45] 2025-10-13 06:14:45,377 [wrapper] pandaids: 6840852464
[2025-10-13 02:14:45] 2025-10-13 06:14:45,403 [wrapper] cleanup supervisor_pilot 16185 6002
[2025-10-13 02:14:45] 2025-10-13 06:14:45,406 [wrapper] Test setup, not cleaning
[2025-10-13 02:14:45] 2025-10-13 06:14:45,408 [wrapper] apfmon messages muted
[2025-10-13 02:14:45] 2025-10-13 06:14:45,411 [wrapper] ==== wrapper stdout END ====
[2025-10-13 02:14:45] 2025-10-13 06:14:45,413 [wrapper] ==== wrapper stderr END ====
[2025-10-13 02:14:45]  *** Error codes and diagnostics ***
[2025-10-13 02:14:45]     "exeErrorCode": 0,
[2025-10-13 02:14:45]     "exeErrorDiag": "",
[2025-10-13 02:14:45]     "pilotErrorCode": 0,
[2025-10-13 02:14:45]     "pilotErrorDiag": "",
[2025-10-13 02:14:45]  *** Listing of results directory ***
[2025-10-13 02:14:45] total 414076
[2025-10-13 02:14:45] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 17:57 pilot3.tar.gz
[2025-10-13 02:14:45] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 18:37 queuedata.json
[2025-10-13 02:14:45] -rwx------ 1 boincer umatlas     36292 Oct 12 18:38 runpilot2-wrapper.sh
[2025-10-13 02:14:45] -rw-r--r-- 1 boincer umatlas       100 Oct 12 23:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 02:14:45] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 23:26 run_atlas
[2025-10-13 02:14:45] -rw-r--r-- 1 boincer umatlas       105 Oct 12 23:26 job.xml
[2025-10-13 02:14:45] -rw-r--r-- 2 boincer umatlas 219338028 Oct 12 23:26 EVNT.46676267._004623.pool.root.1
[2025-10-13 02:14:45] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 23:26 start_atlas.sh
[2025-10-13 02:14:45] drwxrwx--x 2 boincer umatlas      4096 Oct 12 23:26 shared
[2025-10-13 02:14:45] -rw-r--r-- 2 boincer umatlas    569686 Oct 12 23:26 input.tar.gz
[2025-10-13 02:14:45] -rw-r--r-- 1 boincer umatlas         0 Oct 12 23:26 boinc_lockfile
[2025-10-13 02:14:45] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 23:26 pandaJob.out
[2025-10-13 02:14:45] -rw------- 1 boincer umatlas    974373 Oct 12 23:26 agis_schedconf.cvmfs.json
[2025-10-13 02:14:45] -rw------- 1 boincer umatlas   1560580 Oct 12 23:26 agis_ddmendpoints.agis.ALL.json
[2025-10-13 02:14:45] drwx------ 5 boincer umatlas      4096 Oct 12 23:26 pilot3
[2025-10-13 02:14:45] -rw------- 1 boincer umatlas 197123713 Oct 13 02:13 HITS.46676269._091293.pool.root.1
[2025-10-13 02:14:45] -rw------- 1 boincer umatlas        95 Oct 13 02:13 pilot_heartbeat.json
[2025-10-13 02:14:45] -rw-r--r-- 1 boincer umatlas       530 Oct 13 02:13 boinc_task_state.xml
[2025-10-13 02:14:45] -rw------- 1 boincer umatlas      1051 Oct 13 02:13 memory_monitor_summary.json
[2025-10-13 02:14:45] -rw-r--r-- 1 boincer umatlas      5950 Oct 13 02:13 init_data.xml
[2025-10-13 02:14:45] -rw------- 1 boincer umatlas    411204 Oct 13 02:13 log.46676269._091293.job.log.tgz.1
[2025-10-13 02:14:45] -rw------- 1 boincer umatlas      7849 Oct 13 02:14 heartbeat.json
[2025-10-13 02:14:45] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 02:14 boinc_mmap_file
[2025-10-13 02:14:45] -rw-r--r-- 1 boincer umatlas        28 Oct 13 02:14 wrapper_checkpoint.txt
[2025-10-13 02:14:45] -rw------- 1 boincer umatlas      4892 Oct 13 02:14 pilotlog.txt
[2025-10-13 02:14:45] -rw------- 1 boincer umatlas   1417558 Oct 13 02:14 log.46676269._091293.job.log.1
[2025-10-13 02:14:45] -rw------- 1 boincer umatlas       357 Oct 13 02:14 output.list
[2025-10-13 02:14:45] -rw-r--r-- 1 boincer umatlas       620 Oct 13 02:14 runtime_log
[2025-10-13 02:14:45] -rw------- 1 boincer umatlas   1843200 Oct 13 02:14 result.tar.gz
[2025-10-13 02:14:45] -rw-r--r-- 1 boincer umatlas      8699 Oct 13 02:14 runtime_log.err
[2025-10-13 02:14:45] -rw------- 1 boincer umatlas       659 Oct 13 02:14 e97LDmosJS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEtlNDmiP1FPo.diag
[2025-10-13 02:14:45] -rw-r--r-- 1 boincer umatlas     20827 Oct 13 02:14 stderr.txt
[2025-10-13 02:14:45] HITS file was successfully produced:
[2025-10-13 02:14:45] -rw------- 1 boincer umatlas 197123713 Oct 13 02:13 shared/HITS.pool.root.1
[2025-10-13 02:14:45]  *** Contents of shared directory: ***
[2025-10-13 02:14:45] total 409084
[2025-10-13 02:14:45] -rw-r--r-- 2 boincer umatlas 219338028 Oct 12 23:26 ATLAS.root_0
[2025-10-13 02:14:45] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 23:26 start_atlas.sh
[2025-10-13 02:14:45] -rw-r--r-- 2 boincer umatlas    569686 Oct 12 23:26 input.tar.gz
[2025-10-13 02:14:45] -rw------- 1 boincer umatlas 197123713 Oct 13 02:13 HITS.pool.root.1
[2025-10-13 02:14:45] -rw------- 1 boincer umatlas   1843200 Oct 13 02:14 result.tar.gz
02:14:47 (27239): run_atlas exited; CPU time 76460.153002
02:14:47 (27239): called boinc_finish(0)

</stderr_txt>
]]>

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