Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:35 (1192809): wrapper (7.7.26015): starting
00:03:35 (1192809): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 00:03:35] Arguments: --nthreads 9
[2025-10-13 00:03:35] Threads: 9
[2025-10-13 00:03:35] Checking for CVMFS
[2025-10-13 00:03:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:03:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:03:36] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:03:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:03:39] 2.13.2.0 129418 110088 513148 151647 2 215 34355657 39288832 14627 16776704 0 106524231 99.398 174602917 31344 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 00:03:39] CVMFS is ok
[2025-10-13 00:03:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:03:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:03:39] Further information can be found at the LHC@home message board.
[2025-10-13 00:03:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:03:39] Checking for apptainer binary...
[2025-10-13 00:03:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:03:39] Running /usr/bin/apptainer --version
[2025-10-13 00:03:39] apptainer version 1.4.3-1.el9
[2025-10-13 00:03:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:03:41] c-211-23.aglt2.org
[2025-10-13 00:03:41] apptainer works
[2025-10-13 00:03:41] Set ATHENA_PROC_NUMBER=9
[2025-10-13 00:03:41] Set ATHENA_CORE_NUMBER=9
[2025-10-13 00:03:41] Starting ATLAS job with PandaID=6840749272
[2025-10-13 00:03:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 10:22:40]  *** The last 200 lines of the pilot log: ***
[2025-10-13 10:22:40] 2025-10-13 14:21:21,136 | INFO     | chi2: 10.10439259777341
[2025-10-13 10:22:40] 2025-10-13 14:21:21,137 | INFO     | sum of square deviations: 65645881989.69147
[2025-10-13 10:22:40] 2025-10-13 14:21:21,149 | INFO     | sum of deviations: 599113569726.967
[2025-10-13 10:22:40] 2025-10-13 14:21:21,149 | INFO     | mean x: 1760346747.3892617
[2025-10-13 10:22:40] 2025-10-13 14:21:21,150 | INFO     | mean y: 2502975.151006711
[2025-10-13 10:22:40] 2025-10-13 14:21:21,150 | INFO     | -- intersect: -16063205822.108355
[2025-10-13 10:22:40] 2025-10-13 14:21:21,150 | INFO     | intersect: -16063205822.108355
[2025-10-13 10:22:40] 2025-10-13 14:21:21,151 | INFO     | chi2: 7.222486333712757
[2025-10-13 10:22:40] 2025-10-13 14:21:21,152 | INFO     | current chi2=7.222486333712757 (change=28.521321159826137 %)
[2025-10-13 10:22:40] 2025-10-13 14:21:21,153 | INFO     | sum of square deviations: 64007813531.50249
[2025-10-13 10:22:40] 2025-10-13 14:21:21,175 | INFO     | sum of deviations: 593366984487.1875
[2025-10-13 10:22:40] 2025-10-13 14:21:21,175 | INFO     | mean x: 1760346594.9035532
[2025-10-13 10:22:40] 2025-10-13 14:21:21,176 | INFO     | mean y: 2502440.196277496
[2025-10-13 10:22:40] 2025-10-13 14:21:21,180 | INFO     | -- intersect: -16316310733.388021
[2025-10-13 10:22:40] 2025-10-13 14:21:21,180 | INFO     | intersect: -16316310733.388021
[2025-10-13 10:22:40] 2025-10-13 14:21:21,184 | INFO     | chi2: 7.222604022964825
[2025-10-13 10:22:40] 2025-10-13 14:21:21,184 | INFO     | current chi2=7.222604022964825 (change=-0.0016294839011170934 %)
[2025-10-13 10:22:40] 2025-10-13 14:21:21,184 | INFO     | right removable region: 590
[2025-10-13 10:22:40] 2025-10-13 14:21:21,186 | INFO     | sum of square deviations: 65644975526.12748
[2025-10-13 10:22:40] 2025-10-13 14:21:21,214 | INFO     | sum of deviations: 243547858033.90292
[2025-10-13 10:22:40] 2025-10-13 14:21:21,214 | INFO     | mean x: 1760347052.3926175
[2025-10-13 10:22:40] 2025-10-13 14:21:21,214 | INFO     | mean y: 2507421.0687919464
[2025-10-13 10:22:40] 2025-10-13 14:21:21,214 | INFO     | -- intersect: -6528514192.853168
[2025-10-13 10:22:40] 2025-10-13 14:21:21,215 | INFO     | intersect: -6528514192.853168
[2025-10-13 10:22:40] 2025-10-13 14:21:21,216 | INFO     | chi2: 5.997283294140824
[2025-10-13 10:22:40] 2025-10-13 14:21:21,216 | INFO     | current chi2=5.997283294140824 (change=40.64677083645407 %)
[2025-10-13 10:22:40] 2025-10-13 14:21:21,222 | INFO     | sum of square deviations: 64006147602.59894
[2025-10-13 10:22:40] 2025-10-13 14:21:21,246 | INFO     | sum of deviations: 95574035482.35022
[2025-10-13 10:22:40] 2025-10-13 14:21:21,247 | INFO     | mean x: 1760347204.9137056
[2025-10-13 10:22:40] 2025-10-13 14:21:21,247 | INFO     | mean y: 2521185.4382402706
[2025-10-13 10:22:40] 2025-10-13 14:21:21,247 | INFO     | -- intersect: -2626030797.853551
[2025-10-13 10:22:40] 2025-10-13 14:21:21,247 | INFO     | intersect: -2626030797.853551
[2025-10-13 10:22:40] 2025-10-13 14:21:21,256 | INFO     | chi2: 3.8844224173534068
[2025-10-13 10:22:40] 2025-10-13 14:21:21,257 | INFO     | current chi2=3.8844224173534068 (change=35.23029967338082 %)
[2025-10-13 10:22:40] 2025-10-13 14:21:21,258 | INFO     | sum of square deviations: 62394844377.90445
[2025-10-13 10:22:40] 2025-10-13 14:21:21,283 | INFO     | sum of deviations: 21784080867.47432
[2025-10-13 10:22:40] 2025-10-13 14:21:21,283 | INFO     | mean x: 1760347357.4334471
[2025-10-13 10:22:40] 2025-10-13 14:21:21,283 | INFO     | mean y: 2528162.8839590442
[2025-10-13 10:22:40] 2025-10-13 14:21:21,283 | INFO     | -- intersect: -612066673.7810193
[2025-10-13 10:22:40] 2025-10-13 14:21:21,284 | INFO     | intersect: -612066673.7810193
[2025-10-13 10:22:40] 2025-10-13 14:21:21,290 | INFO     | chi2: 3.352533010816039
[2025-10-13 10:22:40] 2025-10-13 14:21:21,291 | INFO     | current chi2=3.352533010816039 (change=13.692882734925691 %)
[2025-10-13 10:22:40] 2025-10-13 14:21:21,291 | INFO     | left removable region: 30
[2025-10-13 10:22:40] 2025-10-13 14:21:21,292 | INFO     | sum of square deviations: 54452402743.99311
[2025-10-13 10:22:40] 2025-10-13 14:21:21,312 | INFO     | sum of deviations: 78795902236.9321
[2025-10-13 10:22:40] 2025-10-13 14:21:21,313 | INFO     | mean x: 1760347479.5035715
[2025-10-13 10:22:40] 2025-10-13 14:21:21,313 | INFO     | mean y: 2552086.2839285713
[2025-10-13 10:22:40] 2025-10-13 14:21:21,313 | INFO     | -- intersect: -2544776606.448456
[2025-10-13 10:22:40] 2025-10-13 14:21:21,313 | INFO     | intersect: -2544776606.448456
[2025-10-13 10:22:40] 2025-10-13 14:21:21,314 | INFO     | chi2: 0.08680152641398393
[2025-10-13 10:22:40] 2025-10-13 14:21:21,315 | INFO     | -- intersect: -2544776606.448456
[2025-10-13 10:22:40] 2025-10-13 14:21:21,318 | INFO     | current memory leak: 1.45 B/s (using 560 data points, chi2=0.09)
[2025-10-13 10:22:40] 2025-10-13 14:21:21,320 | INFO     | could have reported an average CPU frequency of 2899 MHz (23 samples)
[2025-10-13 10:22:40] 2025-10-13 14:21:21,320 | INFO     | ..............................
[2025-10-13 10:22:40] 2025-10-13 14:21:21,320 | INFO     | . Timing measurements:
[2025-10-13 10:22:40] 2025-10-13 14:21:21,320 | INFO     | . get job = 0 s
[2025-10-13 10:22:40] 2025-10-13 14:21:21,321 | INFO     | . initial setup = 12 s
[2025-10-13 10:22:40] 2025-10-13 14:21:21,321 | INFO     | . payload setup = 48 s
[2025-10-13 10:22:40] 2025-10-13 14:21:21,321 | INFO     | . stage-in = 1 s
[2025-10-13 10:22:40] 2025-10-13 14:21:21,321 | INFO     | . payload execution = 36660 s
[2025-10-13 10:22:40] 2025-10-13 14:21:21,321 | INFO     | . stage-out = 11 s
[2025-10-13 10:22:40] 2025-10-13 14:21:21,321 | INFO     | . log creation = 2 s
[2025-10-13 10:22:40] 2025-10-13 14:21:21,322 | INFO     | ..............................
[2025-10-13 10:22:40] 2025-10-13 14:21:21,640 | INFO     | 
[2025-10-13 10:22:40] 2025-10-13 14:21:21,641 | INFO     | job summary report
[2025-10-13 10:22:40] 2025-10-13 14:21:21,641 | INFO     | --------------------------------------------------
[2025-10-13 10:22:40] 2025-10-13 14:21:21,641 | INFO     | PanDA job id: 6840749272
[2025-10-13 10:22:40] 2025-10-13 14:21:21,641 | INFO     | task id: 46676269
[2025-10-13 10:22:40] 2025-10-13 14:21:21,641 | INFO     | errors: (none)
[2025-10-13 10:22:40] 2025-10-13 14:21:21,642 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 10:22:40] 2025-10-13 14:21:21,642 | INFO     | pilot state: finished 
[2025-10-13 10:22:40] 2025-10-13 14:21:21,645 | INFO     | transexitcode: 0
[2025-10-13 10:22:40] 2025-10-13 14:21:21,646 | INFO     | exeerrorcode: 0
[2025-10-13 10:22:40] 2025-10-13 14:21:21,646 | INFO     | exeerrordiag: 
[2025-10-13 10:22:40] 2025-10-13 14:21:21,646 | INFO     | exitcode: 0
[2025-10-13 10:22:40] 2025-10-13 14:21:21,646 | INFO     | exitmsg: OK
[2025-10-13 10:22:40] 2025-10-13 14:21:21,646 | INFO     | cpuconsumptiontime: 81729 s
[2025-10-13 10:22:40] 2025-10-13 14:21:21,646 | INFO     | nevents: 400
[2025-10-13 10:22:40] 2025-10-13 14:21:21,647 | INFO     | neventsw: 0
[2025-10-13 10:22:40] 2025-10-13 14:21:21,647 | INFO     | pid: 1230587
[2025-10-13 10:22:40] 2025-10-13 14:21:21,647 | INFO     | pgrp: 1230587
[2025-10-13 10:22:40] 2025-10-13 14:21:21,647 | INFO     | corecount: 9
[2025-10-13 10:22:40] 2025-10-13 14:21:21,647 | INFO     | event service: False
[2025-10-13 10:22:40] 2025-10-13 14:21:21,648 | INFO     | sizes: {0: 2348029, 2: 2348630, 4: 2348714, 5: 2348969, 6: 2348969, 7: 2348997, 19: 2349153, 31: 2349181, 42: 2349209, 54: 2349265, 66: 2349863, 80: 2349863, 36715
[2025-10-13 10:22:40] 2025-10-13 14:21:21,648 | INFO     | --------------------------------------------------
[2025-10-13 10:22:40] 2025-10-13 14:21:21,648 | INFO     | 
[2025-10-13 10:22:40] 2025-10-13 14:21:21,648 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 10:22:40] 2025-10-13 14:21:22,092 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 10:22:40] 2025-10-13 14:21:22,093 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 10:22:40] 2025-10-13 14:21:22,093 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 10:22:40] 2025-10-13 14:21:22,093 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 10:22:40] 2025-10-13 14:21:22,093 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 10:22:40] 2025-10-13 14:21:22,093 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 10:22:40] 2025-10-13 14:21:22,094 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 10:22:40] 2025-10-13 14:21:22,094 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 10:22:40] 2025-10-13 14:21:22,094 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 10:22:40] 2025-10-13 14:21:22,094 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 10:22:40] 2025-10-13 14:21:22,094 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 10:22:40] 2025-10-13 14:21:22,094 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 10:22:40] 2025-10-13 14:21:22,095 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 10:22:40] 2025-10-13 14:21:22,095 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 10:22:40] 2025-10-13 14:21:22,095 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 10:22:40] 2025-10-13 14:21:22,095 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 10:22:40] 2025-10-13 14:21:22,095 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 10:22:40] 2025-10-13 14:21:22,096 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 10:22:40] 2025-10-13 14:21:22,096 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 10:22:40] 2025-10-13 14:21:22,128 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 10:22:40] 2025-10-13 14:21:22,128 | INFO     | job 6840749272 has completed (purged errors)
[2025-10-13 10:22:40] 2025-10-13 14:21:22,129 | INFO     | overall cleanup function is called
[2025-10-13 10:22:40] 2025-10-13 14:21:23,191 | INFO     | --- collectZombieJob: --- 10, [1230587]
[2025-10-13 10:22:40] 2025-10-13 14:21:23,196 | INFO     | zombie collector waiting for pid 1230587
[2025-10-13 10:22:40] 2025-10-13 14:21:23,196 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 10:22:40] 2025-10-13 14:21:23,197 | INFO     | collected zombie processes
[2025-10-13 10:22:40] 2025-10-13 14:21:23,197 | INFO     | will attempt to kill all subprocesses of pid=1230587
[2025-10-13 10:22:40] 2025-10-13 14:21:28,895 | INFO     | PID=1204854 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 10:22:40] 2025-10-13 14:21:28,895 | INFO     | .. there are 18 such processes running
[2025-10-13 10:22:40] 2025-10-13 14:21:28,947 | INFO     | process IDs to be killed: [1230587] (in reverse order)
[2025-10-13 10:22:40] 2025-10-13 14:21:30,104 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 10:22:40] 2025-10-13 14:21:30,104 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 10:22:40] 2025-10-13 14:21:30,803 | INFO     | did not find any defunct processes belonging to 1230587
[2025-10-13 10:22:40] 2025-10-13 14:21:31,130 | INFO     | did not find any defunct processes belonging to 1230587
[2025-10-13 10:22:40] 2025-10-13 14:21:31,131 | INFO     | ready for new job
[2025-10-13 10:22:40] 2025-10-13 14:21:31,131 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 10:22:40] 2025-10-13 14:21:31,171 | INFO     | ***************************************
[2025-10-13 10:22:40] 2025-10-13 14:21:31,171 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 10:22:40] 2025-10-13 14:21:31,171 | INFO     | ***************************************
[2025-10-13 10:22:40] 2025-10-13 14:21:31,171 | INFO     | 
[2025-10-13 10:22:40] 2025-10-13 14:21:31,227 | INFO     | architecture information:
[2025-10-13 10:22:40] 2025-10-13 14:21:31,261 | INFO     | executing command: cat /etc/os-release
[2025-10-13 10:22:40] 2025-10-13 14:21:31,593 | INFO     | cat /etc/os-release:
[2025-10-13 10:22:40] NAME="CentOS Linux"
[2025-10-13 10:22:40] VERSION="7 (Core)"
[2025-10-13 10:22:40] ID="centos"
[2025-10-13 10:22:40] ID_LIKE="rhel fedora"
[2025-10-13 10:22:40] VERSION_ID="7"
[2025-10-13 10:22:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 10:22:40] ANSI_COLOR="0;31"
[2025-10-13 10:22:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 10:22:40] HOME_URL="https://www.centos.org/"
[2025-10-13 10:22:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 10:22:40] 
[2025-10-13 10:22:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 10:22:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 10:22:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 10:22:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 10:22:40] 
[2025-10-13 10:22:40] 2025-10-13 14:21:31,594 | INFO     | ***************************************
[2025-10-13 10:22:40] 2025-10-13 14:21:32,113 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 10:22:40] 2025-10-13 14:21:32,304 | INFO     | sufficient remaining disk space (52526317568 B)
[2025-10-13 10:22:40] 2025-10-13 14:21:32,304 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 10:22:40] 2025-10-13 14:21:32,304 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 10:22:40] 2025-10-13 14:21:32,304 | INFO     | update_server=False
[2025-10-13 10:22:40] 2025-10-13 14:21:32,305 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 10:22:40] 2025-10-13 14:21:32,314 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:22:40] 2025-10-13 14:21:32,314 | INFO     | aborting loop
[2025-10-13 10:22:40] 2025-10-13 14:21:32,430 | INFO     | all data control threads have been joined
[2025-10-13 10:22:40] 2025-10-13 14:21:32,579 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 10:22:40] 2025-10-13 14:21:33,132 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 10:22:40] 2025-10-13 14:21:33,173 | INFO     | all job control threads have been joined
[2025-10-13 10:22:40] 2025-10-13 14:21:33,320 | INFO     | [job] job monitor thread has finished
[2025-10-13 10:22:40] 2025-10-13 14:21:33,350 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 10:22:40] 2025-10-13 14:21:33,356 | INFO     | [job] retrieve thread has finished
[2025-10-13 10:22:40] 2025-10-13 14:21:33,436 | INFO     | [data] control thread has finished
[2025-10-13 10:22:40] 2025-10-13 14:21:33,507 | INFO     | all payload control threads have been joined
[2025-10-13 10:22:40] 2025-10-13 14:21:33,739 | INFO     | [payload] failed_post thread has finished
[2025-10-13 10:22:40] 2025-10-13 14:21:33,954 | INFO     | [payload] validate_post thread has finished
[2025-10-13 10:22:40] 2025-10-13 14:21:34,059 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 10:22:40] 2025-10-13 14:21:34,070 | INFO     | [job] validate thread has finished
[2025-10-13 10:22:40] 2025-10-13 14:21:34,081 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 10:22:40] 2025-10-13 14:21:34,090 | INFO     | [data] copytool_in thread has finished
[2025-10-13 10:22:40] 2025-10-13 14:21:34,179 | INFO     | [job] control thread has finished
[2025-10-13 10:22:40] 2025-10-13 14:21:34,504 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 10:22:40] 2025-10-13 14:21:34,513 | INFO     | [payload] control thread has finished
[2025-10-13 10:22:40] 2025-10-13 14:21:34,620 | INFO     | [data] copytool_out thread has finished
[2025-10-13 10:22:40] 2025-10-13 14:21:35,027 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:22:40] 2025-10-13 14:21:36,033 | INFO     | [job] queue monitor thread has finished
[2025-10-13 10:22:40] 2025-10-13 14:21:37,201 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 10:22:40] 2025-10-13 14:22:06,193 | INFO     | PID=1204854 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 10:22:40] 2025-10-13 14:22:06,193 | INFO     | .. there are 18 such processes running
[2025-10-13 10:22:40] 2025-10-13 14:22:06,196 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 10:22:40] 2025-10-13 14:22:06,196 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 10:22:40] 2025-10-13 14:22:06,197 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 10:22:40] 2025-10-13 14:22:30,622 | INFO     | [monitor] cgroup control has ended
[2025-10-13 10:22:40] 2025-10-13 14:22:31,955 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140054397613888)>', '<ExcThread(monitor, started 140053766461184)>']
[2025-10-13 10:22:40] 2025-10-13 14:22:32,691 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 10:22:40] 2025-10-13 14:22:32,691 | INFO     | [monitor] control thread has ended
[2025-10-13 10:22:40] 2025-10-13 14:22:37,005 | INFO     | all workflow threads have been joined
[2025-10-13 10:22:40] 2025-10-13 14:22:37,005 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 10:22:40] 2025-10-13 14:22:37,006 | INFO     | traces error code: 0
[2025-10-13 10:22:40] 2025-10-13 14:22:37,006 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 10:22:40] 2025-10-13 14:22:39,968 [wrapper] ==== pilot stdout END ====
[2025-10-13 10:22:40] 2025-10-13 14:22:39,972 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 10:22:40] 2025-10-13 14:22:39,976 [wrapper] pilotpid: 1204854
[2025-10-13 10:22:40] 2025-10-13 14:22:39,980 [wrapper] Pilot exit status: 0
[2025-10-13 10:22:40] 2025-10-13 14:22:40,001 [wrapper] pandaids: 6840749272
[2025-10-13 10:22:40] 2025-10-13 14:22:40,095 [wrapper] cleanup supervisor_pilot 3675332 1204855
[2025-10-13 10:22:40] 2025-10-13 14:22:40,107 [wrapper] Test setup, not cleaning
[2025-10-13 10:22:40] 2025-10-13 14:22:40,115 [wrapper] apfmon messages muted
[2025-10-13 10:22:40] 2025-10-13 14:22:40,119 [wrapper] ==== wrapper stdout END ====
[2025-10-13 10:22:40] 2025-10-13 14:22:40,122 [wrapper] ==== wrapper stderr END ====
[2025-10-13 10:22:40]  *** Error codes and diagnostics ***
[2025-10-13 10:22:40]     "exeErrorCode": 0,
[2025-10-13 10:22:40]     "exeErrorDiag": "",
[2025-10-13 10:22:40]     "pilotErrorCode": 0,
[2025-10-13 10:22:40]     "pilotErrorDiag": "",
[2025-10-13 10:22:40]  *** Listing of results directory ***
[2025-10-13 10:22:40] total 421676
[2025-10-13 10:22:40] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 16:23 pilot3.tar.gz
[2025-10-13 10:22:40] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 16:35 queuedata.json
[2025-10-13 10:22:40] -rwx------. 1 boincer umatlas     36292 Oct 12 16:35 runpilot2-wrapper.sh
[2025-10-13 10:22:40] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 10:22:40] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:03 run_atlas
[2025-10-13 10:22:40] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:03 job.xml
[2025-10-13 10:22:40] -rw-r--r--. 2 boincer umatlas 219065403 Oct 13 00:03 EVNT.46676267._004504.pool.root.1
[2025-10-13 10:22:40] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:03 start_atlas.sh
[2025-10-13 10:22:40] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:03 shared
[2025-10-13 10:22:40] -rw-r--r--. 2 boincer umatlas    569682 Oct 13 00:03 input.tar.gz
[2025-10-13 10:22:40] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:03 boinc_lockfile
[2025-10-13 10:22:40] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:03 pandaJob.out
[2025-10-13 10:22:40] -rw-------. 1 boincer umatlas    974373 Oct 13 00:05 agis_schedconf.cvmfs.json
[2025-10-13 10:22:40] drwx------. 5 boincer umatlas      4096 Oct 13 00:06 pilot3
[2025-10-13 10:22:40] -rw-------. 1 boincer umatlas 200002001 Oct 13 10:16 HITS.46676269._088793.pool.root.1
[2025-10-13 10:22:40] -rw-r--r--. 1 boincer umatlas       531 Oct 13 10:16 boinc_task_state.xml
[2025-10-13 10:22:40] -rw-------. 1 boincer umatlas      1043 Oct 13 10:20 memory_monitor_summary.json
[2025-10-13 10:22:40] -rw-------. 1 boincer umatlas   1560580 Oct 13 10:20 agis_ddmendpoints.agis.ALL.json
[2025-10-13 10:22:40] -rw-------. 1 boincer umatlas    696497 Oct 13 10:20 log.46676269._088793.job.log.tgz.1
[2025-10-13 10:22:40] -rw-------. 1 boincer umatlas      7827 Oct 13 10:21 heartbeat.json
[2025-10-13 10:22:40] -rw-r--r--. 1 boincer umatlas      6525 Oct 13 10:21 init_data.xml
[2025-10-13 10:22:40] -rw-------. 1 boincer umatlas        95 Oct 13 10:22 pilot_heartbeat.json
[2025-10-13 10:22:40] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 10:22 boinc_mmap_file
[2025-10-13 10:22:40] -rw-r--r--. 1 boincer umatlas        28 Oct 13 10:22 wrapper_checkpoint.txt
[2025-10-13 10:22:40] -rw-------. 1 boincer umatlas      4824 Oct 13 10:22 pilotlog.txt
[2025-10-13 10:22:40] -rw-------. 1 boincer umatlas   3718357 Oct 13 10:22 log.46676269._088793.job.log.1
[2025-10-13 10:22:40] -rw-------. 1 boincer umatlas       357 Oct 13 10:22 output.list
[2025-10-13 10:22:40] -rw-r--r--. 1 boincer umatlas       620 Oct 13 10:22 runtime_log
[2025-10-13 10:22:40] -rw-------. 1 boincer umatlas   4433920 Oct 13 10:22 result.tar.gz
[2025-10-13 10:22:40] -rw-r--r--. 1 boincer umatlas      8704 Oct 13 10:22 runtime_log.err
[2025-10-13 10:22:40] -rw-------. 1 boincer umatlas       659 Oct 13 10:22 6KVNDm0xHS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0TlNDmNmhd9n.diag
[2025-10-13 10:22:40] -rw-r--r--. 1 boincer umatlas     21170 Oct 13 10:22 stderr.txt
[2025-10-13 10:22:40] HITS file was successfully produced:
[2025-10-13 10:22:40] -rw-------. 1 boincer umatlas 200002001 Oct 13 10:16 shared/HITS.pool.root.1
[2025-10-13 10:22:40]  *** Contents of shared directory: ***
[2025-10-13 10:22:40] total 414160
[2025-10-13 10:22:40] -rw-r--r--. 2 boincer umatlas 219065403 Oct 13 00:03 ATLAS.root_0
[2025-10-13 10:22:40] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:03 start_atlas.sh
[2025-10-13 10:22:40] -rw-r--r--. 2 boincer umatlas    569682 Oct 13 00:03 input.tar.gz
[2025-10-13 10:22:40] -rw-------. 1 boincer umatlas 200002001 Oct 13 10:16 HITS.pool.root.1
[2025-10-13 10:22:40] -rw-------. 1 boincer umatlas   4433920 Oct 13 10:22 result.tar.gz
10:22:41 (1192809): run_atlas exited; CPU time 82862.671937
10:22:41 (1192809): called boinc_finish(0)

</stderr_txt>
]]>

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