Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:00 (4085980): wrapper (7.7.26015): starting
00:05:00 (4085980): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 00:05:00] Arguments: --nthreads 12
[2025-10-13 00:05:00] Threads: 12
[2025-10-13 00:05:00] Checking for CVMFS
[2025-10-13 00:05:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:05:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:05:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:05:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:05:03] 2.13.2.0 1125174 116147 215596 151647 1 448 24134142 39288832 9757 16776704 2 72843253 99.666 62275029 33324 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 00:05:03] CVMFS is ok
[2025-10-13 00:05:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:05:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:05:03] Further information can be found at the LHC@home message board.
[2025-10-13 00:05:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:05:03] Checking for apptainer binary...
[2025-10-13 00:05:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:05:03] Running /usr/bin/apptainer --version
[2025-10-13 00:05:03] apptainer version 1.4.3-1.el9
[2025-10-13 00:05:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:05:04] c-210-19.aglt2.org
[2025-10-13 00:05:04] apptainer works
[2025-10-13 00:05:05] Set ATHENA_PROC_NUMBER=12
[2025-10-13 00:05:05] Set ATHENA_CORE_NUMBER=12
[2025-10-13 00:05:05] Starting ATLAS job with PandaID=6840854398
[2025-10-13 00:05:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 12:14:47]  *** The last 200 lines of the pilot log: ***
[2025-10-13 12:14:47] 2025-10-13 16:13:55,472 | INFO     | sum of square deviations: 109117502724.16023
[2025-10-13 12:14:47] 2025-10-13 16:13:55,540 | INFO     | sum of deviations: 859300908519.3413
[2025-10-13 12:14:47] 2025-10-13 16:13:55,540 | INFO     | mean x: 1760350191.888102
[2025-10-13 12:14:47] 2025-10-13 16:13:55,541 | INFO     | mean y: 2614328.814447592
[2025-10-13 12:14:47] 2025-10-13 16:13:55,541 | INFO     | -- intersect: -13860152701.563305
[2025-10-13 12:14:47] 2025-10-13 16:13:55,541 | INFO     | intersect: -13860152701.563305
[2025-10-13 12:14:47] 2025-10-13 16:13:55,542 | INFO     | chi2: 7.8851329987244965
[2025-10-13 12:14:47] 2025-10-13 16:13:55,542 | INFO     | current chi2=7.8851329987244965 (change=8.060018373574914 %)
[2025-10-13 12:14:47] 2025-10-13 16:13:55,542 | INFO     | right removable region: 705
[2025-10-13 12:14:47] 2025-10-13 16:13:55,563 | INFO     | sum of square deviations: 109116517394.93475
[2025-10-13 12:14:47] 2025-10-13 16:13:55,625 | INFO     | sum of deviations: 561982322496.9265
[2025-10-13 12:14:47] 2025-10-13 16:13:55,625 | INFO     | mean x: 1760350496.8866856
[2025-10-13 12:14:47] 2025-10-13 16:13:55,625 | INFO     | mean y: 2628539.52407932
[2025-10-13 12:14:47] 2025-10-13 16:13:55,626 | INFO     | -- intersect: -9063696928.584394
[2025-10-13 12:14:47] 2025-10-13 16:13:55,626 | INFO     | intersect: -9063696928.584394
[2025-10-13 12:14:47] 2025-10-13 16:13:55,643 | INFO     | chi2: 4.223236570174216
[2025-10-13 12:14:47] 2025-10-13 16:13:55,643 | INFO     | current chi2=4.223236570174216 (change=50.75741997900695 %)
[2025-10-13 12:14:47] 2025-10-13 16:13:55,644 | INFO     | sum of square deviations: 106814163786.16095
[2025-10-13 12:14:47] 2025-10-13 16:13:55,705 | INFO     | sum of deviations: 374469193900.12006
[2025-10-13 12:14:47] 2025-10-13 16:13:55,705 | INFO     | mean x: 1760350649.3994293
[2025-10-13 12:14:47] 2025-10-13 16:13:55,706 | INFO     | mean y: 2640957.29957204
[2025-10-13 12:14:47] 2025-10-13 16:13:55,706 | INFO     | -- intersect: -6168797972.670912
[2025-10-13 12:14:47] 2025-10-13 16:13:55,706 | INFO     | intersect: -6168797972.670912
[2025-10-13 12:14:47] 2025-10-13 16:13:55,723 | INFO     | chi2: 2.0278329786452445
[2025-10-13 12:14:47] 2025-10-13 16:13:55,723 | INFO     | current chi2=2.0278329786452445 (change=51.983912221105044 %)
[2025-10-13 12:14:47] 2025-10-13 16:13:55,724 | INFO     | sum of square deviations: 104544799688.95975
[2025-10-13 12:14:47] 2025-10-13 16:13:55,803 | INFO     | sum of deviations: 272793740665.3993
[2025-10-13 12:14:47] 2025-10-13 16:13:55,804 | INFO     | mean x: 1760350801.8994253
[2025-10-13 12:14:47] 2025-10-13 16:13:55,804 | INFO     | mean y: 2647784.2485632184
[2025-10-13 12:14:47] 2025-10-13 16:13:55,804 | INFO     | -- intersect: -4590719667.429585
[2025-10-13 12:14:47] 2025-10-13 16:13:55,804 | INFO     | intersect: -4590719667.429585
[2025-10-13 12:14:47] 2025-10-13 16:13:55,805 | INFO     | chi2: 1.386758922566922
[2025-10-13 12:14:47] 2025-10-13 16:13:55,805 | INFO     | current chi2=1.386758922566922 (change=31.613750384245726 %)
[2025-10-13 12:14:47] 2025-10-13 16:13:55,806 | INFO     | sum of square deviations: 102307852451.55765
[2025-10-13 12:14:47] 2025-10-13 16:13:55,899 | INFO     | sum of deviations: 197471086363.3764
[2025-10-13 12:14:47] 2025-10-13 16:13:55,899 | INFO     | mean x: 1760350954.397974
[2025-10-13 12:14:47] 2025-10-13 16:13:55,899 | INFO     | mean y: 2652917.125904486
[2025-10-13 12:14:47] 2025-10-13 16:13:55,899 | INFO     | -- intersect: -3395115748.8752737
[2025-10-13 12:14:47] 2025-10-13 16:13:55,900 | INFO     | intersect: -3395115748.8752737
[2025-10-13 12:14:47] 2025-10-13 16:13:55,901 | INFO     | chi2: 1.05563958861933
[2025-10-13 12:14:47] 2025-10-13 16:13:55,901 | INFO     | current chi2=1.05563958861933 (change=23.87720955381939 %)
[2025-10-13 12:14:47] 2025-10-13 16:13:55,901 | INFO     | left removable region: 40
[2025-10-13 12:14:47] 2025-10-13 16:13:55,902 | INFO     | sum of square deviations: 91189551189.19402
[2025-10-13 12:14:47] 2025-10-13 16:13:55,970 | INFO     | sum of deviations: 122472385029.59703
[2025-10-13 12:14:47] 2025-10-13 16:13:55,970 | INFO     | mean x: 1760351381.3969924
[2025-10-13 12:14:47] 2025-10-13 16:13:55,991 | INFO     | mean y: 2664160.1984962407
[2025-10-13 12:14:47] 2025-10-13 16:13:55,991 | INFO     | -- intersect: -2361580748.9856105
[2025-10-13 12:14:47] 2025-10-13 16:13:55,991 | INFO     | intersect: -2361580748.9856105
[2025-10-13 12:14:47] 2025-10-13 16:13:55,992 | INFO     | chi2: 0.03912917038042363
[2025-10-13 12:14:47] 2025-10-13 16:13:55,992 | INFO     | -- intersect: -2361580748.9856105
[2025-10-13 12:14:47] 2025-10-13 16:13:55,993 | INFO     | current memory leak: 1.34 B/s (using 665 data points, chi2=0.04)
[2025-10-13 12:14:47] 2025-10-13 16:13:55,994 | INFO     | could have reported an average CPU frequency of 2590 MHz (27 samples)
[2025-10-13 12:14:47] 2025-10-13 16:13:55,994 | INFO     | ..............................
[2025-10-13 12:14:47] 2025-10-13 16:13:55,994 | INFO     | . Timing measurements:
[2025-10-13 12:14:47] 2025-10-13 16:13:55,994 | INFO     | . get job = 0 s
[2025-10-13 12:14:47] 2025-10-13 16:13:55,994 | INFO     | . initial setup = 13 s
[2025-10-13 12:14:47] 2025-10-13 16:13:55,994 | INFO     | . payload setup = 81 s
[2025-10-13 12:14:47] 2025-10-13 16:13:56,015 | INFO     | . stage-in = 0 s
[2025-10-13 12:14:47] 2025-10-13 16:13:56,015 | INFO     | . payload execution = 43377 s
[2025-10-13 12:14:47] 2025-10-13 16:13:56,015 | INFO     | . stage-out = 3 s
[2025-10-13 12:14:47] 2025-10-13 16:13:56,015 | INFO     | . log creation = 0 s
[2025-10-13 12:14:47] 2025-10-13 16:13:56,015 | INFO     | ..............................
[2025-10-13 12:14:47] 2025-10-13 16:13:56,188 | INFO     | time since job start (43604s) is within the limit (172800.0s)
[2025-10-13 12:14:47] 2025-10-13 16:13:56,474 | INFO     | 
[2025-10-13 12:14:47] 2025-10-13 16:13:56,475 | INFO     | job summary report
[2025-10-13 12:14:47] 2025-10-13 16:13:56,475 | INFO     | --------------------------------------------------
[2025-10-13 12:14:47] 2025-10-13 16:13:56,475 | INFO     | PanDA job id: 6840854398
[2025-10-13 12:14:47] 2025-10-13 16:13:56,475 | INFO     | task id: 46676269
[2025-10-13 12:14:47] 2025-10-13 16:13:56,475 | INFO     | errors: (none)
[2025-10-13 12:14:47] 2025-10-13 16:13:56,475 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 12:14:47] 2025-10-13 16:13:56,475 | INFO     | pilot state: finished 
[2025-10-13 12:14:47] 2025-10-13 16:13:56,475 | INFO     | transexitcode: 0
[2025-10-13 12:14:47] 2025-10-13 16:13:56,475 | INFO     | exeerrorcode: 0
[2025-10-13 12:14:47] 2025-10-13 16:13:56,476 | INFO     | exeerrordiag: 
[2025-10-13 12:14:47] 2025-10-13 16:13:56,476 | INFO     | exitcode: 0
[2025-10-13 12:14:47] 2025-10-13 16:13:56,476 | INFO     | exitmsg: OK
[2025-10-13 12:14:47] 2025-10-13 16:13:56,476 | INFO     | cpuconsumptiontime: 56270 s
[2025-10-13 12:14:47] 2025-10-13 16:13:56,476 | INFO     | nevents: 400
[2025-10-13 12:14:47] 2025-10-13 16:13:56,476 | INFO     | neventsw: 0
[2025-10-13 12:14:47] 2025-10-13 16:13:56,476 | INFO     | pid: 4105107
[2025-10-13 12:14:47] 2025-10-13 16:13:56,476 | INFO     | pgrp: 4105107
[2025-10-13 12:14:47] 2025-10-13 16:13:56,476 | INFO     | corecount: 12
[2025-10-13 12:14:47] 2025-10-13 16:13:56,476 | INFO     | event service: False
[2025-10-13 12:14:47] 2025-10-13 16:13:56,476 | INFO     | sizes: {0: 2348624, 1: 2348708, 2: 2348907, 14: 2348907, 25: 2348935, 36: 2348963, 48: 2349119, 61: 2349409, 72: 2349437, 43462: 2392596, 43467: 2401930, 43483: 24
[2025-10-13 12:14:47] 2025-10-13 16:13:56,477 | INFO     | --------------------------------------------------
[2025-10-13 12:14:47] 2025-10-13 16:13:56,477 | INFO     | 
[2025-10-13 12:14:47] 2025-10-13 16:13:56,477 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 12:14:47] 2025-10-13 16:13:56,498 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 12:14:47] 2025-10-13 16:13:56,498 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 12:14:47] 2025-10-13 16:13:56,498 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 12:14:47] 2025-10-13 16:13:56,498 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 12:14:47] 2025-10-13 16:13:56,499 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 12:14:47] 2025-10-13 16:13:56,499 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 12:14:47] 2025-10-13 16:13:56,499 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 12:14:47] 2025-10-13 16:13:56,499 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 12:14:47] 2025-10-13 16:13:56,499 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 12:14:47] 2025-10-13 16:13:56,499 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 12:14:47] 2025-10-13 16:13:56,499 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 12:14:47] 2025-10-13 16:13:56,499 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 12:14:47] 2025-10-13 16:13:56,499 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 12:14:47] 2025-10-13 16:13:56,499 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 12:14:47] 2025-10-13 16:13:56,500 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 12:14:47] 2025-10-13 16:13:56,500 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 12:14:47] 2025-10-13 16:13:56,500 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 12:14:47] 2025-10-13 16:13:56,500 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 12:14:47] 2025-10-13 16:13:56,500 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 12:14:47] 2025-10-13 16:13:56,500 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 12:14:47] 2025-10-13 16:13:56,500 | INFO     | job 6840854398 has completed (purged errors)
[2025-10-13 12:14:47] 2025-10-13 16:13:56,500 | INFO     | overall cleanup function is called
[2025-10-13 12:14:47] 2025-10-13 16:13:57,510 | INFO     | --- collectZombieJob: --- 10, [4105107]
[2025-10-13 12:14:47] 2025-10-13 16:13:57,510 | INFO     | zombie collector waiting for pid 4105107
[2025-10-13 12:14:47] 2025-10-13 16:13:57,510 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 12:14:47] 2025-10-13 16:13:57,510 | INFO     | collected zombie processes
[2025-10-13 12:14:47] 2025-10-13 16:13:57,510 | INFO     | will attempt to kill all subprocesses of pid=4105107
[2025-10-13 12:14:47] 2025-10-13 16:13:58,257 | INFO     | process IDs to be killed: [4105107] (in reverse order)
[2025-10-13 12:14:47] 2025-10-13 16:13:58,522 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 12:14:47] 2025-10-13 16:13:58,522 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 12:14:47] 2025-10-13 16:13:58,530 | INFO     | did not find any defunct processes belonging to 4105107
[2025-10-13 12:14:47] 2025-10-13 16:13:58,538 | INFO     | did not find any defunct processes belonging to 4105107
[2025-10-13 12:14:47] 2025-10-13 16:13:58,538 | INFO     | ready for new job
[2025-10-13 12:14:47] 2025-10-13 16:13:58,539 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 12:14:47] 2025-10-13 16:13:58,543 | INFO     | ***************************************
[2025-10-13 12:14:47] 2025-10-13 16:13:58,543 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 12:14:47] 2025-10-13 16:13:58,543 | INFO     | ***************************************
[2025-10-13 12:14:47] 2025-10-13 16:13:58,543 | INFO     | 
[2025-10-13 12:14:47] 2025-10-13 16:13:58,550 | INFO     | architecture information:
[2025-10-13 12:14:47] 2025-10-13 16:13:58,555 | INFO     | executing command: cat /etc/os-release
[2025-10-13 12:14:47] 2025-10-13 16:13:58,581 | INFO     | cat /etc/os-release:
[2025-10-13 12:14:47] NAME="CentOS Linux"
[2025-10-13 12:14:47] VERSION="7 (Core)"
[2025-10-13 12:14:47] ID="centos"
[2025-10-13 12:14:47] ID_LIKE="rhel fedora"
[2025-10-13 12:14:47] VERSION_ID="7"
[2025-10-13 12:14:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 12:14:47] ANSI_COLOR="0;31"
[2025-10-13 12:14:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 12:14:47] HOME_URL="https://www.centos.org/"
[2025-10-13 12:14:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 12:14:47] 
[2025-10-13 12:14:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 12:14:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 12:14:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 12:14:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 12:14:47] 
[2025-10-13 12:14:47] 2025-10-13 16:13:58,581 | INFO     | ***************************************
[2025-10-13 12:14:47] 2025-10-13 16:13:59,084 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 12:14:47] 2025-10-13 16:13:59,105 | INFO     | sufficient remaining disk space (52598669312 B)
[2025-10-13 12:14:47] 2025-10-13 16:13:59,106 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 12:14:47] 2025-10-13 16:13:59,106 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 12:14:47] 2025-10-13 16:13:59,106 | INFO     | update_server=False
[2025-10-13 12:14:47] 2025-10-13 16:13:59,106 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 12:14:47] 2025-10-13 16:13:59,430 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 12:14:47] 2025-10-13 16:13:59,430 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 12:14:47] 2025-10-13 16:13:59,430 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:14:47] 2025-10-13 16:13:59,430 | INFO     | will abort loop
[2025-10-13 12:14:47] 2025-10-13 16:13:59,711 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 12:14:47] 2025-10-13 16:13:59,905 | INFO     | all payload control threads have been joined
[2025-10-13 12:14:47] 2025-10-13 16:13:59,934 | INFO     | all data control threads have been joined
[2025-10-13 12:14:47] 2025-10-13 16:13:59,936 | INFO     | all job control threads have been joined
[2025-10-13 12:14:47] 2025-10-13 16:14:00,113 | INFO     | [job] retrieve thread has finished
[2025-10-13 12:14:47] 2025-10-13 16:14:00,394 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 12:14:47] 2025-10-13 16:14:00,436 | INFO     | [job] job monitor thread has finished
[2025-10-13 12:14:47] 2025-10-13 16:14:00,440 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 12:14:47] 2025-10-13 16:14:00,566 | INFO     | [payload] failed_post thread has finished
[2025-10-13 12:14:47] 2025-10-13 16:14:00,911 | INFO     | [payload] control thread has finished
[2025-10-13 12:14:47] 2025-10-13 16:14:00,940 | INFO     | [data] control thread has finished
[2025-10-13 12:14:47] 2025-10-13 16:14:00,943 | INFO     | [job] control thread has finished
[2025-10-13 12:14:47] 2025-10-13 16:14:01,081 | INFO     | [payload] validate_post thread has finished
[2025-10-13 12:14:47] 2025-10-13 16:14:01,237 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 12:14:47] 2025-10-13 16:14:01,289 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 12:14:47] 2025-10-13 16:14:01,451 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 12:14:47] 2025-10-13 16:14:01,509 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:14:47] 2025-10-13 16:14:01,510 | INFO     | [job] validate thread has finished
[2025-10-13 12:14:47] 2025-10-13 16:14:01,513 | INFO     | [data] copytool_in thread has finished
[2025-10-13 12:14:47] 2025-10-13 16:14:02,401 | INFO     | [data] copytool_out thread has finished
[2025-10-13 12:14:47] 2025-10-13 16:14:02,516 | INFO     | [job] queue monitor thread has finished
[2025-10-13 12:14:47] 2025-10-13 16:14:03,720 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 12:14:47] 2025-10-13 16:14:30,358 | INFO     | PID=4091525 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 12:14:47] 2025-10-13 16:14:30,358 | INFO     | .. there are 8 such processes running
[2025-10-13 12:14:47] 2025-10-13 16:14:30,447 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 12:14:47] 2025-10-13 16:14:30,447 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 12:14:47] 2025-10-13 16:14:30,447 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 12:14:47] 2025-10-13 16:14:41,504 | INFO     | [monitor] cgroup control has ended
[2025-10-13 12:14:47] 2025-10-13 16:14:41,807 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140275866212160)>', '<ExcThread(monitor, started 140274638518016)>']
[2025-10-13 12:14:47] 2025-10-13 16:14:42,542 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 12:14:47] 2025-10-13 16:14:42,542 | INFO     | [monitor] control thread has ended
[2025-10-13 12:14:47] 2025-10-13 16:14:46,834 | INFO     | all workflow threads have been joined
[2025-10-13 12:14:47] 2025-10-13 16:14:46,839 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 12:14:47] 2025-10-13 16:14:46,839 | INFO     | traces error code: 0
[2025-10-13 12:14:47] 2025-10-13 16:14:46,839 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 12:14:47] 2025-10-13 16:14:47,337 [wrapper] ==== pilot stdout END ====
[2025-10-13 12:14:47] 2025-10-13 16:14:47,371 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 12:14:47] 2025-10-13 16:14:47,401 [wrapper] pilotpid: 4091525
[2025-10-13 12:14:47] 2025-10-13 16:14:47,424 [wrapper] Pilot exit status: 0
[2025-10-13 12:14:47] 2025-10-13 16:14:47,481 [wrapper] pandaids: 6840854398
[2025-10-13 12:14:47] 2025-10-13 16:14:47,536 [wrapper] cleanup supervisor_pilot  953270 4091526
[2025-10-13 12:14:47] 2025-10-13 16:14:47,540 [wrapper] Test setup, not cleaning
[2025-10-13 12:14:47] 2025-10-13 16:14:47,544 [wrapper] apfmon messages muted
[2025-10-13 12:14:47] 2025-10-13 16:14:47,549 [wrapper] ==== wrapper stdout END ====
[2025-10-13 12:14:47] 2025-10-13 16:14:47,562 [wrapper] ==== wrapper stderr END ====
[2025-10-13 12:14:47]  *** Error codes and diagnostics ***
[2025-10-13 12:14:47]     "exeErrorCode": 0,
[2025-10-13 12:14:47]     "exeErrorDiag": "",
[2025-10-13 12:14:47]     "pilotErrorCode": 0,
[2025-10-13 12:14:47]     "pilotErrorDiag": "",
[2025-10-13 12:14:47]  *** Listing of results directory ***
[2025-10-13 12:14:47] total 426064
[2025-10-13 12:14:47] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 18:49 pilot3.tar.gz
[2025-10-13 12:14:47] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 18:51 queuedata.json
[2025-10-13 12:14:47] -rwx------. 1 boincer umatlas     36292 Oct 12 18:53 runpilot2-wrapper.sh
[2025-10-13 12:14:47] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 12:14:47] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:04 run_atlas
[2025-10-13 12:14:47] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:04 job.xml
[2025-10-13 12:14:47] -rw-r--r--. 2 boincer umatlas 224118860 Oct 13 00:05 EVNT.46676267._004637.pool.root.1
[2025-10-13 12:14:47] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:05 start_atlas.sh
[2025-10-13 12:14:47] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:05 shared
[2025-10-13 12:14:47] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 00:05 input.tar.gz
[2025-10-13 12:14:47] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:05 boinc_lockfile
[2025-10-13 12:14:47] -rw-r--r--. 1 boincer umatlas      2547 Oct 13 00:05 pandaJob.out
[2025-10-13 12:14:47] -rw-------. 1 boincer umatlas    974373 Oct 13 00:07 agis_schedconf.cvmfs.json
[2025-10-13 12:14:47] drwx------. 5 boincer umatlas      4096 Oct 13 00:07 pilot3
[2025-10-13 12:14:47] -rw-------. 1 boincer umatlas 196637946 Oct 13 12:12 HITS.46676269._091634.pool.root.1
[2025-10-13 12:14:47] -rw-r--r--. 1 boincer umatlas       530 Oct 13 12:12 boinc_task_state.xml
[2025-10-13 12:14:47] -rw-r--r--. 1 boincer umatlas      6709 Oct 13 12:13 init_data.xml
[2025-10-13 12:14:47] -rw-------. 1 boincer umatlas      1053 Oct 13 12:13 memory_monitor_summary.json
[2025-10-13 12:14:47] -rw-------. 1 boincer umatlas   1560580 Oct 13 12:13 agis_ddmendpoints.agis.ALL.json
[2025-10-13 12:14:47] -rw-------. 1 boincer umatlas    848488 Oct 13 12:13 log.46676269._091634.job.log.tgz.1
[2025-10-13 12:14:47] -rw-------. 1 boincer umatlas      7847 Oct 13 12:13 heartbeat.json
[2025-10-13 12:14:47] -rw-------. 1 boincer umatlas        95 Oct 13 12:14 pilot_heartbeat.json
[2025-10-13 12:14:47] -rw-r--r--. 1 boincer umatlas        27 Oct 13 12:14 wrapper_checkpoint.txt
[2025-10-13 12:14:47] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 12:14 boinc_mmap_file
[2025-10-13 12:14:47] -rw-------. 1 boincer umatlas      5009 Oct 13 12:14 pilotlog.txt
[2025-10-13 12:14:47] -rw-------. 1 boincer umatlas   4965744 Oct 13 12:14 log.46676269._091634.job.log.1
[2025-10-13 12:14:47] -rw-------. 1 boincer umatlas       357 Oct 13 12:14 output.list
[2025-10-13 12:14:47] -rw-r--r--. 1 boincer umatlas       620 Oct 13 12:14 runtime_log
[2025-10-13 12:14:47] -rw-------. 1 boincer umatlas   5836800 Oct 13 12:14 result.tar.gz
[2025-10-13 12:14:47] -rw-r--r--. 1 boincer umatlas      8706 Oct 13 12:14 runtime_log.err
[2025-10-13 12:14:47] -rw-------. 1 boincer umatlas       662 Oct 13 12:14 9INODmP7JS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxwlNDmk7UpXo.diag
[2025-10-13 12:14:47] -rw-r--r--. 1 boincer umatlas     21119 Oct 13 12:14 stderr.txt
[2025-10-13 12:14:47] HITS file was successfully produced:
[2025-10-13 12:14:47] -rw-------. 1 boincer umatlas 196637946 Oct 13 12:12 shared/HITS.pool.root.1
[2025-10-13 12:14:47]  *** Contents of shared directory: ***
[2025-10-13 12:14:47] total 417180
[2025-10-13 12:14:47] -rw-r--r--. 2 boincer umatlas 224118860 Oct 13 00:05 ATLAS.root_0
[2025-10-13 12:14:47] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:05 start_atlas.sh
[2025-10-13 12:14:47] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 00:05 input.tar.gz
[2025-10-13 12:14:47] -rw-------. 1 boincer umatlas 196637946 Oct 13 12:12 HITS.pool.root.1
[2025-10-13 12:14:47] -rw-------. 1 boincer umatlas   5836800 Oct 13 12:14 result.tar.gz
12:14:49 (4085980): run_atlas exited; CPU time 57234.139820
12:14:49 (4085980): called boinc_finish(0)

</stderr_txt>
]]>

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