Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:00:42 (342290): wrapper (7.7.26015): starting
00:00:42 (342290): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 00:00:42] Arguments: --nthreads 12
[2025-10-13 00:00:42] Threads: 12
[2025-10-13 00:00:42] Checking for CVMFS
[2025-10-13 00:00:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:00:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:00:43] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:00:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:00:45] 2.13.2.0 2498914 130175 479016 151647 1 599 17610627 32935936 29907 16776704 0 242901727 99.610 242860757 20737 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:00:45] CVMFS is ok
[2025-10-13 00:00:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:00:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:00:45] Further information can be found at the LHC@home message board.
[2025-10-13 00:00:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:00:45] Checking for apptainer binary...
[2025-10-13 00:00:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:00:45] Running /usr/bin/apptainer --version
[2025-10-13 00:00:45] apptainer version 1.4.3-1.el9
[2025-10-13 00:00:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:00:45] c6-2-11-3.aglt2.org
[2025-10-13 00:00:45] apptainer works
[2025-10-13 00:00:46] Set ATHENA_PROC_NUMBER=12
[2025-10-13 00:00:46] Set ATHENA_CORE_NUMBER=12
[2025-10-13 00:00:46] Starting ATLAS job with PandaID=6841069779
[2025-10-13 00:00:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:13:13]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:13:13] 2025-10-13 10:12:38,604 | INFO     | current chi2=7.370879433226971 (change=11.778986841348098 %)
[2025-10-13 06:13:13] 2025-10-13 10:12:38,604 | INFO     | right removable region: 356
[2025-10-13 06:13:13] 2025-10-13 10:12:38,605 | INFO     | sum of square deviations: 14108531265.479004
[2025-10-13 06:13:13] 2025-10-13 10:12:38,608 | INFO     | sum of deviations: 219136445611.43716
[2025-10-13 06:13:13] 2025-10-13 10:12:38,608 | INFO     | mean x: 1760339470.9159663
[2025-10-13 06:13:13] 2025-10-13 10:12:38,608 | INFO     | mean y: 2274996.74789916
[2025-10-13 06:13:13] 2025-10-13 10:12:38,608 | INFO     | -- intersect: -27339659288.780003
[2025-10-13 06:13:13] 2025-10-13 10:12:38,609 | INFO     | intersect: -27339659288.780003
[2025-10-13 06:13:13] 2025-10-13 10:12:38,609 | INFO     | chi2: 4.5995423820621015
[2025-10-13 06:13:13] 2025-10-13 10:12:38,609 | INFO     | current chi2=4.5995423820621015 (change=44.94872793842065 %)
[2025-10-13 06:13:13] 2025-10-13 10:12:38,610 | INFO     | sum of square deviations: 13523921170.079569
[2025-10-13 06:13:13] 2025-10-13 10:12:38,613 | INFO     | sum of deviations: 145630857747.07422
[2025-10-13 06:13:13] 2025-10-13 10:12:38,613 | INFO     | mean x: 1760339623.4261363
[2025-10-13 06:13:13] 2025-10-13 10:12:38,613 | INFO     | mean y: 2294157.752840909
[2025-10-13 06:13:13] 2025-10-13 10:12:38,613 | INFO     | -- intersect: -18953729473.387676
[2025-10-13 06:13:13] 2025-10-13 10:12:38,613 | INFO     | intersect: -18953729473.387676
[2025-10-13 06:13:13] 2025-10-13 10:12:38,614 | INFO     | chi2: 2.8653357925873646
[2025-10-13 06:13:13] 2025-10-13 10:12:38,614 | INFO     | current chi2=2.8653357925873646 (change=37.70389411429326 %)
[2025-10-13 06:13:13] 2025-10-13 10:12:38,615 | INFO     | sum of square deviations: 12955683840.605148
[2025-10-13 06:13:13] 2025-10-13 10:12:38,618 | INFO     | sum of deviations: 89477744290.76949
[2025-10-13 06:13:13] 2025-10-13 10:12:38,618 | INFO     | mean x: 1760339775.9365995
[2025-10-13 06:13:13] 2025-10-13 10:12:38,618 | INFO     | mean y: 2309223.2622478385
[2025-10-13 06:13:13] 2025-10-13 10:12:38,618 | INFO     | -- intersect: -12155384208.747921
[2025-10-13 06:13:13] 2025-10-13 10:12:38,618 | INFO     | intersect: -12155384208.747921
[2025-10-13 06:13:13] 2025-10-13 10:12:38,619 | INFO     | chi2: 1.8895523481989938
[2025-10-13 06:13:13] 2025-10-13 10:12:38,619 | INFO     | current chi2=1.8895523481989938 (change=34.05476757428315 %)
[2025-10-13 06:13:13] 2025-10-13 10:12:38,619 | INFO     | sum of square deviations: 12403565058.654993
[2025-10-13 06:13:13] 2025-10-13 10:12:38,622 | INFO     | sum of deviations: 46863905782.678345
[2025-10-13 06:13:13] 2025-10-13 10:12:38,622 | INFO     | mean x: 1760339928.4502923
[2025-10-13 06:13:13] 2025-10-13 10:12:38,623 | INFO     | mean y: 2320977.216374269
[2025-10-13 06:13:13] 2025-10-13 10:12:38,623 | INFO     | -- intersect: -6648702673.021722
[2025-10-13 06:13:13] 2025-10-13 10:12:38,623 | INFO     | intersect: -6648702673.021722
[2025-10-13 06:13:13] 2025-10-13 10:12:38,623 | INFO     | chi2: 1.3100180695584358
[2025-10-13 06:13:13] 2025-10-13 10:12:38,623 | INFO     | current chi2=1.3100180695584358 (change=30.67045372905041 %)
[2025-10-13 06:13:13] 2025-10-13 10:12:38,624 | INFO     | sum of square deviations: 11867416506.332254
[2025-10-13 06:13:13] 2025-10-13 10:12:38,627 | INFO     | sum of deviations: 24016791063.537117
[2025-10-13 06:13:13] 2025-10-13 10:12:38,627 | INFO     | mean x: 1760340080.9554896
[2025-10-13 06:13:13] 2025-10-13 10:12:38,627 | INFO     | mean y: 2327456.169139466
[2025-10-13 06:13:13] 2025-10-13 10:12:38,627 | INFO     | -- intersect: -3560176640.8699527
[2025-10-13 06:13:13] 2025-10-13 10:12:38,627 | INFO     | intersect: -3560176640.8699527
[2025-10-13 06:13:13] 2025-10-13 10:12:38,628 | INFO     | chi2: 1.1237323192525916
[2025-10-13 06:13:13] 2025-10-13 10:12:38,628 | INFO     | current chi2=1.1237323192525916 (change=14.22009013727841 %)
[2025-10-13 06:13:13] 2025-10-13 10:12:38,628 | INFO     | left removable region: 50
[2025-10-13 06:13:13] 2025-10-13 10:12:38,629 | INFO     | sum of square deviations: 8884432398.339909
[2025-10-13 06:13:13] 2025-10-13 10:12:38,635 | INFO     | sum of deviations: 33918481440.052303
[2025-10-13 06:13:13] 2025-10-13 10:12:38,635 | INFO     | mean x: 1760340660.4771242
[2025-10-13 06:13:13] 2025-10-13 10:12:38,635 | INFO     | mean y: 2340368.1503267973
[2025-10-13 06:13:13] 2025-10-13 10:12:38,636 | INFO     | -- intersect: -6718188231.033955
[2025-10-13 06:13:13] 2025-10-13 10:12:38,636 | INFO     | intersect: -6718188231.033955
[2025-10-13 06:13:13] 2025-10-13 10:12:38,636 | INFO     | chi2: 0.08820935995546905
[2025-10-13 06:13:13] 2025-10-13 10:12:38,636 | INFO     | -- intersect: -6718188231.033955
[2025-10-13 06:13:13] 2025-10-13 10:12:38,636 | INFO     | current memory leak: 3.82 B/s (using 306 data points, chi2=0.09)
[2025-10-13 06:13:13] 2025-10-13 10:12:38,637 | INFO     | could have reported an average CPU frequency of 2584 MHz (16 samples)
[2025-10-13 06:13:13] 2025-10-13 10:12:38,638 | INFO     | ..............................
[2025-10-13 06:13:13] 2025-10-13 10:12:38,638 | INFO     | . Timing measurements:
[2025-10-13 06:13:13] 2025-10-13 10:12:38,638 | INFO     | . get job = 0 s
[2025-10-13 06:13:13] 2025-10-13 10:12:38,638 | INFO     | . initial setup = 9 s
[2025-10-13 06:13:13] 2025-10-13 10:12:38,638 | INFO     | . payload setup = 55 s
[2025-10-13 06:13:13] 2025-10-13 10:12:38,638 | INFO     | . stage-in = 0 s
[2025-10-13 06:13:13] 2025-10-13 10:12:38,638 | INFO     | . payload execution = 22058 s
[2025-10-13 06:13:13] 2025-10-13 10:12:38,638 | INFO     | . stage-out = 4 s
[2025-10-13 06:13:13] 2025-10-13 10:12:38,638 | INFO     | . log creation = 0 s
[2025-10-13 06:13:13] 2025-10-13 10:12:38,638 | INFO     | ..............................
[2025-10-13 06:13:13] 2025-10-13 10:12:38,830 | INFO     | 
[2025-10-13 06:13:13] 2025-10-13 10:12:38,830 | INFO     | job summary report
[2025-10-13 06:13:13] 2025-10-13 10:12:38,830 | INFO     | --------------------------------------------------
[2025-10-13 06:13:13] 2025-10-13 10:12:38,830 | INFO     | PanDA job id: 6841069779
[2025-10-13 06:13:13] 2025-10-13 10:12:38,830 | INFO     | task id: 46676269
[2025-10-13 06:13:13] 2025-10-13 10:12:38,830 | INFO     | errors: (none)
[2025-10-13 06:13:13] 2025-10-13 10:12:38,831 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 06:13:13] 2025-10-13 10:12:38,831 | INFO     | pilot state: finished 
[2025-10-13 06:13:13] 2025-10-13 10:12:38,831 | INFO     | transexitcode: 0
[2025-10-13 06:13:13] 2025-10-13 10:12:38,831 | INFO     | exeerrorcode: 0
[2025-10-13 06:13:13] 2025-10-13 10:12:38,831 | INFO     | exeerrordiag: 
[2025-10-13 06:13:13] 2025-10-13 10:12:38,831 | INFO     | exitcode: 0
[2025-10-13 06:13:13] 2025-10-13 10:12:38,831 | INFO     | exitmsg: OK
[2025-10-13 06:13:13] 2025-10-13 10:12:38,831 | INFO     | cpuconsumptiontime: 52856 s
[2025-10-13 06:13:13] 2025-10-13 10:12:38,831 | INFO     | nevents: 400
[2025-10-13 06:13:13] 2025-10-13 10:12:38,831 | INFO     | neventsw: 0
[2025-10-13 06:13:13] 2025-10-13 10:12:38,831 | INFO     | pid: 373359
[2025-10-13 06:13:13] 2025-10-13 10:12:38,831 | INFO     | pgrp: 373359
[2025-10-13 06:13:13] 2025-10-13 10:12:38,831 | INFO     | corecount: 12
[2025-10-13 06:13:13] 2025-10-13 10:12:38,831 | INFO     | event service: False
[2025-10-13 06:13:13] 2025-10-13 10:12:38,832 | INFO     | sizes: {0: 2348029, 1: 2348630, 2: 2348742, 3: 2348941, 14: 2348941, 25: 2348969, 36: 2349125, 38: 2349415, 47: 2349443, 22118: 2383477, 22122: 2392811, 22144: 239
[2025-10-13 06:13:13] 2025-10-13 10:12:38,832 | INFO     | --------------------------------------------------
[2025-10-13 06:13:13] 2025-10-13 10:12:38,832 | INFO     | 
[2025-10-13 06:13:13] 2025-10-13 10:12:38,832 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-13 06:13:13] 2025-10-13 10:12:38,919 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 06:13:13] 2025-10-13 10:12:38,920 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 06:13:13] 2025-10-13 10:12:38,920 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 06:13:13] 2025-10-13 10:12:38,920 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 06:13:13] 2025-10-13 10:12:38,920 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 06:13:13] 2025-10-13 10:12:38,920 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 06:13:13] 2025-10-13 10:12:38,920 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 06:13:13] 2025-10-13 10:12:38,921 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 06:13:13] 2025-10-13 10:12:38,921 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 06:13:13] 2025-10-13 10:12:38,921 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 06:13:13] 2025-10-13 10:12:38,921 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 06:13:13] 2025-10-13 10:12:38,921 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 06:13:13] 2025-10-13 10:12:38,921 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 06:13:13] 2025-10-13 10:12:38,921 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 06:13:13] 2025-10-13 10:12:38,921 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 06:13:13] 2025-10-13 10:12:38,921 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 06:13:13] 2025-10-13 10:12:38,921 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 06:13:13] 2025-10-13 10:12:38,921 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 06:13:13] 2025-10-13 10:12:38,921 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 06:13:13] 2025-10-13 10:12:38,922 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 06:13:13] 2025-10-13 10:12:38,922 | INFO     | job 6841069779 has completed (purged errors)
[2025-10-13 06:13:13] 2025-10-13 10:12:38,922 | INFO     | overall cleanup function is called
[2025-10-13 06:13:13] 2025-10-13 10:12:39,932 | INFO     | --- collectZombieJob: --- 10, [373359]
[2025-10-13 06:13:13] 2025-10-13 10:12:39,932 | INFO     | zombie collector waiting for pid 373359
[2025-10-13 06:13:13] 2025-10-13 10:12:39,932 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 06:13:13] 2025-10-13 10:12:39,933 | INFO     | collected zombie processes
[2025-10-13 06:13:13] 2025-10-13 10:12:39,933 | INFO     | will attempt to kill all subprocesses of pid=373359
[2025-10-13 06:13:13] 2025-10-13 10:12:40,735 | INFO     | process IDs to be killed: [373359] (in reverse order)
[2025-10-13 06:13:13] 2025-10-13 10:12:40,950 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 06:13:13] 2025-10-13 10:12:40,951 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 06:13:13] 2025-10-13 10:12:40,973 | INFO     | did not find any defunct processes belonging to 373359
[2025-10-13 06:13:13] 2025-10-13 10:12:40,995 | INFO     | did not find any defunct processes belonging to 373359
[2025-10-13 06:13:13] 2025-10-13 10:12:40,996 | INFO     | ready for new job
[2025-10-13 06:13:13] 2025-10-13 10:12:40,996 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:13:13] 2025-10-13 10:12:40,999 | INFO     | ***************************************
[2025-10-13 06:13:13] 2025-10-13 10:12:40,999 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:13:13] 2025-10-13 10:12:41,000 | INFO     | ***************************************
[2025-10-13 06:13:13] 2025-10-13 10:12:41,000 | INFO     | 
[2025-10-13 06:13:13] 2025-10-13 10:12:41,019 | INFO     | architecture information:
[2025-10-13 06:13:13] 2025-10-13 10:12:41,023 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:13:13] 2025-10-13 10:12:41,049 | INFO     | cat /etc/os-release:
[2025-10-13 06:13:13] NAME="CentOS Linux"
[2025-10-13 06:13:13] VERSION="7 (Core)"
[2025-10-13 06:13:13] ID="centos"
[2025-10-13 06:13:13] ID_LIKE="rhel fedora"
[2025-10-13 06:13:13] VERSION_ID="7"
[2025-10-13 06:13:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:13:13] ANSI_COLOR="0;31"
[2025-10-13 06:13:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:13:13] HOME_URL="https://www.centos.org/"
[2025-10-13 06:13:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:13:13] 
[2025-10-13 06:13:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:13:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:13:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:13:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:13:13] 
[2025-10-13 06:13:13] 2025-10-13 10:12:41,049 | INFO     | ***************************************
[2025-10-13 06:13:13] 2025-10-13 10:12:41,553 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-13 06:13:13] 2025-10-13 10:12:41,618 | INFO     | sufficient remaining disk space (74265395200 B)
[2025-10-13 06:13:13] 2025-10-13 10:12:41,618 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:13:13] 2025-10-13 10:12:41,618 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:13:13] 2025-10-13 10:12:41,618 | INFO     | update_server=False
[2025-10-13 06:13:13] 2025-10-13 10:12:41,619 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:13:13] 2025-10-13 10:12:41,625 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:13:13] 2025-10-13 10:12:42,035 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 06:13:13] 2025-10-13 10:12:42,035 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 06:13:13] 2025-10-13 10:12:42,035 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:13:13] 2025-10-13 10:12:42,035 | INFO     | will abort loop
[2025-10-13 06:13:13] 2025-10-13 10:12:42,534 | INFO     | all data control threads have been joined
[2025-10-13 06:13:13] 2025-10-13 10:12:42,625 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:13:13] 2025-10-13 10:12:42,739 | INFO     | all payload control threads have been joined
[2025-10-13 06:13:13] 2025-10-13 10:12:42,751 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:13:13] 2025-10-13 10:12:42,778 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:13:13] 2025-10-13 10:12:42,957 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:13:13] 2025-10-13 10:12:43,041 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:13:13] 2025-10-13 10:12:43,170 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:13:13] 2025-10-13 10:12:43,230 | INFO     | all job control threads have been joined
[2025-10-13 06:13:13] 2025-10-13 10:12:43,540 | INFO     | [data] control thread has finished
[2025-10-13 06:13:13] 2025-10-13 10:12:43,687 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:13:13] 2025-10-13 10:12:43,726 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:13:13] 2025-10-13 10:12:43,745 | INFO     | [payload] control thread has finished
[2025-10-13 06:13:13] 2025-10-13 10:12:43,766 | INFO     | [job] validate thread has finished
[2025-10-13 06:13:13] 2025-10-13 10:12:43,832 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:13:13] 2025-10-13 10:12:43,844 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:13:13] 2025-10-13 10:12:43,972 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:13:13] 2025-10-13 10:12:44,236 | INFO     | [job] control thread has finished
[2025-10-13 06:13:13] 2025-10-13 10:12:44,785 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:13:13] 2025-10-13 10:12:44,850 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:13:13] 2025-10-13 10:12:45,637 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:13:13] 2025-10-13 10:12:47,771 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:13:13] 2025-10-13 10:12:48,722 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140537882072896)>', '<ExcThread(monitor, started 140537084499712)>']
[2025-10-13 06:13:13] 2025-10-13 10:12:53,748 | INFO     | all workflow threads have been joined
[2025-10-13 06:13:13] 2025-10-13 10:12:53,774 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:13:13] 2025-10-13 10:12:53,774 | INFO     | traces error code: 0
[2025-10-13 06:13:13] 2025-10-13 10:12:53,774 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:13:13] 2025-10-13 10:13:12,033 | INFO     | PID=351533 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 06:13:13] 2025-10-13 10:13:12,051 | INFO     | .. there are 27 such processes running
[2025-10-13 06:13:13] 2025-10-13 10:13:12,052 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:13:13] 2025-10-13 10:13:12,053 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:13:13] 2025-10-13 10:13:12,053 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:13:13] 2025-10-13 10:13:12,053 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:13:13] 2025-10-13 10:13:12,053 | INFO     | [monitor] control thread has ended
[2025-10-13 06:13:13] 2025-10-13 10:13:12,623 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:13:13] 2025-10-13 10:13:12,629 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:13:13] 2025-10-13 10:13:12,646 [wrapper] pilotpid: 351533
[2025-10-13 06:13:13] 2025-10-13 10:13:12,651 [wrapper] Pilot exit status: 0
[2025-10-13 06:13:13] 2025-10-13 10:13:12,775 [wrapper] pandaids: 6841069779
[2025-10-13 06:13:13] 2025-10-13 10:13:12,910 [wrapper] cleanup supervisor_pilot 1469792 351534
[2025-10-13 06:13:13] 2025-10-13 10:13:12,937 [wrapper] Test setup, not cleaning
[2025-10-13 06:13:13] 2025-10-13 10:13:12,940 [wrapper] apfmon messages muted
[2025-10-13 06:13:13] 2025-10-13 10:13:12,943 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:13:13] 2025-10-13 10:13:12,946 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:13:13]  *** Error codes and diagnostics ***
[2025-10-13 06:13:13]     "exeErrorCode": 0,
[2025-10-13 06:13:13]     "exeErrorDiag": "",
[2025-10-13 06:13:13]     "pilotErrorCode": 0,
[2025-10-13 06:13:13]     "pilotErrorDiag": "",
[2025-10-13 06:13:13]  *** Listing of results directory ***
[2025-10-13 06:13:13] total 414804
[2025-10-13 06:13:13] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 20:48 pilot3.tar.gz
[2025-10-13 06:13:13] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 21:07 queuedata.json
[2025-10-13 06:13:13] -rwx------. 1 boincer umatlas     36292 Oct 12 21:07 runpilot2-wrapper.sh
[2025-10-13 06:13:13] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:13:13] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:00 run_atlas
[2025-10-13 06:13:13] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:00 job.xml
[2025-10-13 06:13:13] -rw-r--r--. 2 boincer umatlas 222214561 Oct 13 00:00 EVNT.46676267._004719.pool.root.1
[2025-10-13 06:13:13] -rw-r--r--. 2 boincer umatlas    569684 Oct 13 00:00 input.tar.gz
[2025-10-13 06:13:13] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:00 start_atlas.sh
[2025-10-13 06:13:13] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:00 shared
[2025-10-13 06:13:13] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:00 boinc_lockfile
[2025-10-13 06:13:13] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:00 pandaJob.out
[2025-10-13 06:13:13] -rw-------. 1 boincer umatlas    974373 Oct 13 00:02 agis_schedconf.cvmfs.json
[2025-10-13 06:13:13] drwx------. 5 boincer umatlas      4096 Oct 13 00:02 pilot3
[2025-10-13 06:13:13] -rw-r--r--. 1 boincer umatlas      6858 Oct 13 06:01 init_data.xml
[2025-10-13 06:13:13] -rw-------. 1 boincer umatlas 191804199 Oct 13 06:11 HITS.46676269._093819.pool.root.1
[2025-10-13 06:13:13] -rw-r--r--. 1 boincer umatlas       531 Oct 13 06:11 boinc_task_state.xml
[2025-10-13 06:13:13] -rw-------. 1 boincer umatlas      1053 Oct 13 06:12 memory_monitor_summary.json
[2025-10-13 06:13:13] -rw-------. 1 boincer umatlas   1560580 Oct 13 06:12 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:13:13] -rw-------. 1 boincer umatlas    634754 Oct 13 06:12 log.46676269._093819.job.log.tgz.1
[2025-10-13 06:13:13] -rw-------. 1 boincer umatlas      7848 Oct 13 06:12 heartbeat.json
[2025-10-13 06:13:13] -rw-------. 1 boincer umatlas        95 Oct 13 06:13 pilot_heartbeat.json
[2025-10-13 06:13:13] -rw-------. 1 boincer umatlas       822 Oct 13 06:13 pilotlog.txt
[2025-10-13 06:13:13] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 06:13 boinc_mmap_file
[2025-10-13 06:13:13] -rw-r--r--. 1 boincer umatlas        28 Oct 13 06:13 wrapper_checkpoint.txt
[2025-10-13 06:13:13] -rw-------. 1 boincer umatlas   2786794 Oct 13 06:13 log.46676269._093819.job.log.1
[2025-10-13 06:13:13] -rw-------. 1 boincer umatlas       357 Oct 13 06:13 output.list
[2025-10-13 06:13:13] -rw-r--r--. 1 boincer umatlas       620 Oct 13 06:13 runtime_log
[2025-10-13 06:13:13] -rw-------. 1 boincer umatlas   3440640 Oct 13 06:13 result.tar.gz
[2025-10-13 06:13:13] -rw-r--r--. 1 boincer umatlas      8711 Oct 13 06:13 runtime_log.err
[2025-10-13 06:13:13] -rw-------. 1 boincer umatlas       660 Oct 13 06:13 gTTMDmRDMS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmYQVMDm5JwMTn.diag
[2025-10-13 06:13:13] -rw-r--r--. 1 boincer umatlas     21123 Oct 13 06:13 stderr.txt
[2025-10-13 06:13:13] HITS file was successfully produced:
[2025-10-13 06:13:13] -rw-------. 1 boincer umatlas 191804199 Oct 13 06:11 shared/HITS.pool.root.1
[2025-10-13 06:13:13]  *** Contents of shared directory: ***
[2025-10-13 06:13:13] total 408264
[2025-10-13 06:13:13] -rw-r--r--. 2 boincer umatlas 222214561 Oct 13 00:00 ATLAS.root_0
[2025-10-13 06:13:13] -rw-r--r--. 2 boincer umatlas    569684 Oct 13 00:00 input.tar.gz
[2025-10-13 06:13:13] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:00 start_atlas.sh
[2025-10-13 06:13:13] -rw-------. 1 boincer umatlas 191804199 Oct 13 06:11 HITS.pool.root.1
[2025-10-13 06:13:13] -rw-------. 1 boincer umatlas   3440640 Oct 13 06:13 result.tar.gz
06:13:15 (342290): run_atlas exited; CPU time 53909.740547
06:13:15 (342290): called boinc_finish(0)

</stderr_txt>
]]>

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