Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:27:27 (31207): wrapper (7.7.26015): starting
23:27:27 (31207): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 23:27:27] Arguments: --nthreads 12
[2025-10-12 23:27:27] Threads: 12
[2025-10-12 23:27:27] Checking for CVMFS
[2025-10-12 23:27:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 23:27:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 23:27:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 23:27:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 23:27:28] 2.11.2.0 2925 223781 99912 151647 0 57 12090670 20275201 1 130560 1 109165282 99.985 12923563 12194 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 23:27:28] CVMFS is ok
[2025-10-12 23:27:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 23:27:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 23:27:28] Further information can be found at the LHC@home message board.
[2025-10-12 23:27:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 23:27:28] Checking for apptainer binary...
[2025-10-12 23:27:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 23:27:28] Running /usr/bin/apptainer --version
[2025-10-12 23:27:28] apptainer version 1.3.2-1.el7
[2025-10-12 23:27:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 23:27:29] c-205-10.aglt2.org
[2025-10-12 23:27:29] apptainer works
[2025-10-12 23:27:29] Set ATHENA_PROC_NUMBER=12
[2025-10-12 23:27:29] Set ATHENA_CORE_NUMBER=12
[2025-10-12 23:27:29] Starting ATLAS job with PandaID=6840852487
[2025-10-12 23:27:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 00:43:57]  *** The last 200 lines of the pilot log: ***
[2025-10-13 00:43:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 00:43:57]  replicas=None
[2025-10-13 00:43:57]  scope=mc23_13p6TeV
[2025-10-13 00:43:57]  status=None
[2025-10-13 00:43:57]  status_code=0
[2025-10-13 00:43:57]  storage_token=
[2025-10-13 00:43:57]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840852487/log.46676269._091316.job.log.tgz.1
[2025-10-13 00:43:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ef/28/log.46676269._091316.job.log.tgz.1
[2025-10-13 00:43:57]  workdir=None
[2025-10-13 00:43:57] ]
[2025-10-13 00:43:57] 2025-10-13 04:43:06,169 | INFO     | transferring file log.46676269._091316.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840852487/log.46676269._091316.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 00:43:57] 2025-10-13 04:43:06,169 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840852487/log.46676269._091316.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._091316.job
[2025-10-13 00:43:57] 2025-10-13 04:43:06,191 | INFO     | adding to output.list: log.46676269._091316.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ef/28/log.46676269._091316.job.log.tg
[2025-10-13 00:43:57] 2025-10-13 04:43:06,192 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 00:43:57] 2025-10-13 04:43:06,193 | INFO     | summary of transferred files:
[2025-10-13 00:43:57] 2025-10-13 04:43:06,193 | INFO     |  -- lfn=log.46676269._091316.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 00:43:57] 2025-10-13 04:43:06,193 | INFO     | stage-out finished correctly
[2025-10-13 00:43:57] 2025-10-13 04:43:06,277 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 00:43:57] 2025-10-13 04:43:07,511 | INFO     | job 6840852487 has state=finished
[2025-10-13 00:43:57] 2025-10-13 04:43:07,512 | INFO     | preparing for final server update for job 6840852487 in state='finished'
[2025-10-13 00:43:57] 2025-10-13 04:43:07,512 | INFO     | this job has now completed (state=finished)
[2025-10-13 00:43:57] 2025-10-13 04:43:07,512 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 00:43:57] 2025-10-13 04:43:07,513 | INFO     | log transfer has been attempted: DONE
[2025-10-13 00:43:57] 2025-10-13 04:43:07,513 | INFO     | job 6840852487 has finished - writing final server update
[2025-10-13 00:43:57] 2025-10-13 04:43:07,513 | INFO     | total number of processed events: 400 (read)
[2025-10-13 00:43:57] 2025-10-13 04:43:07,514 | INFO     | executing command: lscpu
[2025-10-13 00:43:57] 2025-10-13 04:43:07,539 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 00:43:57] 2025-10-13 04:43:07,978 | INFO     | monitor loop #339: job 0:6840852487 is in state 'finished'
[2025-10-13 00:43:57] 2025-10-13 04:43:07,978 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 00:43:57] 2025-10-13 04:43:08,102 | INFO     | time since job start (4523s) is within the limit (172800.0s)
[2025-10-13 00:43:57] 2025-10-13 04:43:10,108 | INFO     | time since job start (4525s) is within the limit (172800.0s)
[2025-10-13 00:43:57] 2025-10-13 04:43:10,480 | INFO     | monitor loop #340: job 0:6840852487 is in state 'finished'
[2025-10-13 00:43:57] 2025-10-13 04:43:10,480 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 00:43:57] 2025-10-13 04:43:11,220 | INFO     | PID=2689 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 00:43:57] 2025-10-13 04:43:12,221 | INFO     | time since job start (4527s) is within the limit (172800.0s)
[2025-10-13 00:43:57] 2025-10-13 04:43:12,983 | INFO     | monitor loop #341: job 0:6840852487 is in state 'finished'
[2025-10-13 00:43:57] 2025-10-13 04:43:12,983 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 00:43:57] 2025-10-13 04:43:13,413 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 00:43:57] 2025-10-13 04:43:13,417 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1729.0833333333333
[2025-10-13 00:43:57] 2025-10-13 04:43:13,418 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840852487/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 00:43:57] 2025-10-13 04:43:13,419 | INFO     | extracted standard info from prmon json
[2025-10-13 00:43:57] 2025-10-13 04:43:13,419 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 00:43:57] 2025-10-13 04:43:13,419 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 00:43:57] 2025-10-13 04:43:13,419 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 00:43:57] 2025-10-13 04:43:13,419 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 00:43:57] 2025-10-13 04:43:13,421 | INFO     | fitting pss+swap vs Time
[2025-10-13 00:43:57] 2025-10-13 04:43:13,421 | INFO     | sum of square deviations: 93240818.0
[2025-10-13 00:43:57] 2025-10-13 04:43:13,421 | INFO     | sum of deviations: -8779758792.000002
[2025-10-13 00:43:57] 2025-10-13 04:43:13,421 | INFO     | mean x: 1760328412.0
[2025-10-13 00:43:57] 2025-10-13 04:43:13,422 | INFO     | mean y: 2834219.895522388
[2025-10-13 00:43:57] 2025-10-13 04:43:13,422 | INFO     | -- intersect: 165759196975.7907
[2025-10-13 00:43:57] 2025-10-13 04:43:13,422 | INFO     | intersect: 165759196975.7907
[2025-10-13 00:43:57] 2025-10-13 04:43:13,422 | INFO     | chi2: 0.054985100550109585
[2025-10-13 00:43:57] 2025-10-13 04:43:13,422 | INFO     | -- intersect: 165759196975.7907
[2025-10-13 00:43:57] 2025-10-13 04:43:13,422 | INFO     | current memory leak: -94.16 B/s (using 67 data points, chi2=0.05)
[2025-10-13 00:43:57] 2025-10-13 04:43:13,423 | INFO     | could have reported an average CPU frequency of 2072 MHz (6 samples)
[2025-10-13 00:43:57] 2025-10-13 04:43:13,423 | INFO     | ..............................
[2025-10-13 00:43:57] 2025-10-13 04:43:13,423 | INFO     | . Timing measurements:
[2025-10-13 00:43:57] 2025-10-13 04:43:13,423 | INFO     | . get job = 0 s
[2025-10-13 00:43:57] 2025-10-13 04:43:13,423 | INFO     | . initial setup = 2 s
[2025-10-13 00:43:57] 2025-10-13 04:43:13,423 | INFO     | . payload setup = 7 s
[2025-10-13 00:43:57] 2025-10-13 04:43:13,423 | INFO     | . stage-in = 0 s
[2025-10-13 00:43:57] 2025-10-13 04:43:13,423 | INFO     | . payload execution = 4491 s
[2025-10-13 00:43:57] 2025-10-13 04:43:13,423 | INFO     | . stage-out = 0 s
[2025-10-13 00:43:57] 2025-10-13 04:43:13,424 | INFO     | . log creation = 0 s
[2025-10-13 00:43:57] 2025-10-13 04:43:13,424 | INFO     | ..............................
[2025-10-13 00:43:57] 2025-10-13 04:43:13,869 | INFO     | 
[2025-10-13 00:43:57] 2025-10-13 04:43:13,870 | INFO     | job summary report
[2025-10-13 00:43:57] 2025-10-13 04:43:13,870 | INFO     | --------------------------------------------------
[2025-10-13 00:43:57] 2025-10-13 04:43:13,870 | INFO     | PanDA job id: 6840852487
[2025-10-13 00:43:57] 2025-10-13 04:43:13,870 | INFO     | task id: 46676269
[2025-10-13 00:43:57] 2025-10-13 04:43:13,870 | INFO     | errors: (none)
[2025-10-13 00:43:57] 2025-10-13 04:43:13,870 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 00:43:57] 2025-10-13 04:43:13,871 | INFO     | pilot state: finished 
[2025-10-13 00:43:57] 2025-10-13 04:43:13,871 | INFO     | transexitcode: 0
[2025-10-13 00:43:57] 2025-10-13 04:43:13,871 | INFO     | exeerrorcode: 0
[2025-10-13 00:43:57] 2025-10-13 04:43:13,871 | INFO     | exeerrordiag: 
[2025-10-13 00:43:57] 2025-10-13 04:43:13,871 | INFO     | exitcode: 0
[2025-10-13 00:43:57] 2025-10-13 04:43:13,871 | INFO     | exitmsg: OK
[2025-10-13 00:43:57] 2025-10-13 04:43:13,871 | INFO     | cpuconsumptiontime: 46546 s
[2025-10-13 00:43:57] 2025-10-13 04:43:13,872 | INFO     | nevents: 400
[2025-10-13 00:43:57] 2025-10-13 04:43:13,872 | INFO     | neventsw: 0
[2025-10-13 00:43:57] 2025-10-13 04:43:13,872 | INFO     | pid: 9120
[2025-10-13 00:43:57] 2025-10-13 04:43:13,872 | INFO     | pgrp: 9120
[2025-10-13 00:43:57] 2025-10-13 04:43:13,872 | INFO     | corecount: 12
[2025-10-13 00:43:57] 2025-10-13 04:43:13,872 | INFO     | event service: False
[2025-10-13 00:43:57] 2025-10-13 04:43:13,873 | INFO     | sizes: {0: 2348029, 1: 2348885, 6: 2349147, 12: 2349175, 4502: 2375279, 4504: 2384461, 4512: 2384599}
[2025-10-13 00:43:57] 2025-10-13 04:43:13,873 | INFO     | --------------------------------------------------
[2025-10-13 00:43:57] 2025-10-13 04:43:13,873 | INFO     | 
[2025-10-13 00:43:57] 2025-10-13 04:43:13,873 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 00:43:57] 2025-10-13 04:43:13,897 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 00:43:57] 2025-10-13 04:43:13,897 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 00:43:57] 2025-10-13 04:43:13,897 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 00:43:57] 2025-10-13 04:43:13,897 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 00:43:57] 2025-10-13 04:43:13,898 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 00:43:57] 2025-10-13 04:43:13,898 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 00:43:57] 2025-10-13 04:43:13,898 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 00:43:57] 2025-10-13 04:43:13,898 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 00:43:57] 2025-10-13 04:43:13,898 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 00:43:57] 2025-10-13 04:43:13,898 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 00:43:57] 2025-10-13 04:43:13,899 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 00:43:57] 2025-10-13 04:43:13,899 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 00:43:57] 2025-10-13 04:43:13,899 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 00:43:57] 2025-10-13 04:43:13,899 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 00:43:57] 2025-10-13 04:43:13,899 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 00:43:57] 2025-10-13 04:43:13,899 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 00:43:57] 2025-10-13 04:43:13,900 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 00:43:57] 2025-10-13 04:43:13,900 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 00:43:57] 2025-10-13 04:43:13,900 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 00:43:57] 2025-10-13 04:43:13,900 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 00:43:57] 2025-10-13 04:43:13,900 | INFO     | job 6840852487 has completed (purged errors)
[2025-10-13 00:43:57] 2025-10-13 04:43:13,901 | INFO     | overall cleanup function is called
[2025-10-13 00:43:57] 2025-10-13 04:43:14,909 | INFO     | --- collectZombieJob: --- 10, [9120]
[2025-10-13 00:43:57] 2025-10-13 04:43:14,909 | INFO     | zombie collector waiting for pid 9120
[2025-10-13 00:43:57] 2025-10-13 04:43:14,909 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 00:43:57] 2025-10-13 04:43:14,909 | INFO     | collected zombie processes
[2025-10-13 00:43:57] 2025-10-13 04:43:14,909 | INFO     | will attempt to kill all subprocesses of pid=9120
[2025-10-13 00:43:57] 2025-10-13 04:43:15,005 | INFO     | process IDs to be killed: [9120] (in reverse order)
[2025-10-13 00:43:57] 2025-10-13 04:43:15,056 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 00:43:57] 2025-10-13 04:43:15,057 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 00:43:57] 2025-10-13 04:43:15,060 | INFO     | did not find any defunct processes belonging to 9120
[2025-10-13 00:43:57] 2025-10-13 04:43:15,063 | INFO     | did not find any defunct processes belonging to 9120
[2025-10-13 00:43:57] 2025-10-13 04:43:15,064 | INFO     | ready for new job
[2025-10-13 00:43:57] 2025-10-13 04:43:15,064 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 00:43:57] 2025-10-13 04:43:15,065 | INFO     | ***************************************
[2025-10-13 00:43:57] 2025-10-13 04:43:15,066 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 00:43:57] 2025-10-13 04:43:15,066 | INFO     | ***************************************
[2025-10-13 00:43:57] 2025-10-13 04:43:15,066 | INFO     | 
[2025-10-13 00:43:57] 2025-10-13 04:43:15,067 | INFO     | architecture information:
[2025-10-13 00:43:57] 2025-10-13 04:43:15,067 | INFO     | executing command: cat /etc/os-release
[2025-10-13 00:43:57] 2025-10-13 04:43:15,082 | INFO     | cat /etc/os-release:
[2025-10-13 00:43:57] NAME="CentOS Linux"
[2025-10-13 00:43:57] VERSION="7 (Core)"
[2025-10-13 00:43:57] ID="centos"
[2025-10-13 00:43:57] ID_LIKE="rhel fedora"
[2025-10-13 00:43:57] VERSION_ID="7"
[2025-10-13 00:43:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 00:43:57] ANSI_COLOR="0;31"
[2025-10-13 00:43:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 00:43:57] HOME_URL="https://www.centos.org/"
[2025-10-13 00:43:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 00:43:57] 
[2025-10-13 00:43:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 00:43:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 00:43:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 00:43:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 00:43:57] 
[2025-10-13 00:43:57] 2025-10-13 04:43:15,082 | INFO     | ***************************************
[2025-10-13 00:43:57] 2025-10-13 04:43:15,585 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 00:43:57] 2025-10-13 04:43:15,602 | INFO     | sufficient remaining disk space (29371662336 B)
[2025-10-13 00:43:57] 2025-10-13 04:43:15,602 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 00:43:57] 2025-10-13 04:43:15,602 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 00:43:57] 2025-10-13 04:43:15,602 | INFO     | update_server=False
[2025-10-13 00:43:57] 2025-10-13 04:43:15,602 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 00:43:57] 2025-10-13 04:43:16,180 | INFO     | all job control threads have been joined
[2025-10-13 00:43:57] 2025-10-13 04:43:16,186 | INFO     | all data control threads have been joined
[2025-10-13 00:43:57] 2025-10-13 04:43:16,263 | INFO     | all payload control threads have been joined
[2025-10-13 00:43:57] 2025-10-13 04:43:16,491 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:43:57] 2025-10-13 04:43:16,491 | INFO     | aborting loop
[2025-10-13 00:43:57] 2025-10-13 04:43:16,608 | INFO     | [job] retrieve thread has finished
[2025-10-13 00:43:57] 2025-10-13 04:43:16,789 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 00:43:57] 2025-10-13 04:43:16,818 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 00:43:57] 2025-10-13 04:43:16,866 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 00:43:57] 2025-10-13 04:43:16,959 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 00:43:57] 2025-10-13 04:43:17,185 | INFO     | [job] control thread has finished
[2025-10-13 00:43:57] 2025-10-13 04:43:17,192 | INFO     | [data] control thread has finished
[2025-10-13 00:43:57] 2025-10-13 04:43:17,268 | INFO     | [payload] control thread has finished
[2025-10-13 00:43:57] 2025-10-13 04:43:17,347 | INFO     | [data] copytool_in thread has finished
[2025-10-13 00:43:57] 2025-10-13 04:43:17,493 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 00:43:57] 2025-10-13 04:43:17,497 | INFO     | [job] job monitor thread has finished
[2025-10-13 00:43:57] 2025-10-13 04:43:17,842 | INFO     | [payload] validate_post thread has finished
[2025-10-13 00:43:57] 2025-10-13 04:43:17,906 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 00:43:57] 2025-10-13 04:43:17,936 | INFO     | [job] validate thread has finished
[2025-10-13 00:43:57] 2025-10-13 04:43:18,033 | INFO     | [payload] failed_post thread has finished
[2025-10-13 00:43:57] 2025-10-13 04:43:18,511 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:43:57] 2025-10-13 04:43:18,795 | INFO     | [data] copytool_out thread has finished
[2025-10-13 00:43:57] 2025-10-13 04:43:19,517 | INFO     | [job] queue monitor thread has finished
[2025-10-13 00:43:57] 2025-10-13 04:43:20,872 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 00:43:57] 2025-10-13 04:43:45,426 | INFO     | PID=2689 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 00:43:57] 2025-10-13 04:43:45,427 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 00:43:57] 2025-10-13 04:43:45,427 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 00:43:57] 2025-10-13 04:43:45,427 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 00:43:57] 2025-10-13 04:43:51,807 | INFO     | [monitor] cgroup control has ended
[2025-10-13 00:43:57] 2025-10-13 04:43:51,889 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139708151420736)>', '<ExcThread(monitor, started 139707493115648)>']
[2025-10-13 00:43:57] 2025-10-13 04:43:52,463 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 00:43:57] 2025-10-13 04:43:52,463 | INFO     | [monitor] control thread has ended
[2025-10-13 00:43:57] 2025-10-13 04:43:56,915 | INFO     | all workflow threads have been joined
[2025-10-13 00:43:57] 2025-10-13 04:43:56,915 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 00:43:57] 2025-10-13 04:43:56,921 | INFO     | traces error code: 0
[2025-10-13 00:43:57] 2025-10-13 04:43:56,921 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 00:43:57] 2025-10-13 04:43:57,020 [wrapper] ==== pilot stdout END ====
[2025-10-13 00:43:57] 2025-10-13 04:43:57,024 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 00:43:57] 2025-10-13 04:43:57,028 [wrapper] pilotpid: 2689
[2025-10-13 00:43:57] 2025-10-13 04:43:57,033 [wrapper] Pilot exit status: 0
[2025-10-13 00:43:57] 2025-10-13 04:43:57,048 [wrapper] pandaids: 6840852487
[2025-10-13 00:43:57] 2025-10-13 04:43:57,093 [wrapper] cleanup supervisor_pilot 30942 2690
[2025-10-13 00:43:57] 2025-10-13 04:43:57,097 [wrapper] Test setup, not cleaning
[2025-10-13 00:43:57] 2025-10-13 04:43:57,101 [wrapper] apfmon messages muted
[2025-10-13 00:43:57] 2025-10-13 04:43:57,105 [wrapper] ==== wrapper stdout END ====
[2025-10-13 00:43:57] 2025-10-13 04:43:57,109 [wrapper] ==== wrapper stderr END ====
[2025-10-13 00:43:57]  *** Error codes and diagnostics ***
[2025-10-13 00:43:57]     "exeErrorCode": 0,
[2025-10-13 00:43:57]     "exeErrorDiag": "",
[2025-10-13 00:43:57]     "pilotErrorCode": 0,
[2025-10-13 00:43:57]     "pilotErrorDiag": "",
[2025-10-13 00:43:57]  *** Listing of results directory ***
[2025-10-13 00:43:57] total 406900
[2025-10-13 00:43:57] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 17:57 pilot3.tar.gz
[2025-10-13 00:43:57] -rwx------ 1 boincer umatlas     36292 Oct 12 18:39 runpilot2-wrapper.sh
[2025-10-13 00:43:57] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 18:39 queuedata.json
[2025-10-13 00:43:57] -rw-r--r-- 1 boincer umatlas       100 Oct 12 23:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 00:43:57] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 23:27 run_atlas
[2025-10-13 00:43:57] -rw-r--r-- 1 boincer umatlas       105 Oct 12 23:27 job.xml
[2025-10-13 00:43:57] -rw-r--r-- 2 boincer umatlas 218539522 Oct 12 23:27 EVNT.46676267._004624.pool.root.1
[2025-10-13 00:43:57] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 23:27 start_atlas.sh
[2025-10-13 00:43:57] drwxrwx--x 2 boincer umatlas      4096 Oct 12 23:27 shared
[2025-10-13 00:43:57] -rw-r--r-- 2 boincer umatlas    569675 Oct 12 23:27 input.tar.gz
[2025-10-13 00:43:57] -rw-r--r-- 1 boincer umatlas         0 Oct 12 23:27 boinc_lockfile
[2025-10-13 00:43:57] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 23:27 pandaJob.out
[2025-10-13 00:43:57] -rw------- 1 boincer umatlas    974373 Oct 12 23:27 agis_schedconf.cvmfs.json
[2025-10-13 00:43:57] -rw------- 1 boincer umatlas   1560580 Oct 12 23:27 agis_ddmendpoints.agis.ALL.json
[2025-10-13 00:43:57] drwx------ 5 boincer umatlas      4096 Oct 12 23:27 pilot3
[2025-10-13 00:43:57] -rw-r--r-- 1 boincer umatlas      5953 Oct 13 00:38 init_data.xml
[2025-10-13 00:43:57] -rw------- 1 boincer umatlas 192138870 Oct 13 00:42 HITS.46676269._091316.pool.root.1
[2025-10-13 00:43:57] -rw-r--r-- 1 boincer umatlas       530 Oct 13 00:42 boinc_task_state.xml
[2025-10-13 00:43:57] -rw------- 1 boincer umatlas      1050 Oct 13 00:43 memory_monitor_summary.json
[2025-10-13 00:43:57] -rw------- 1 boincer umatlas    387355 Oct 13 00:43 log.46676269._091316.job.log.tgz.1
[2025-10-13 00:43:57] -rw------- 1 boincer umatlas      7862 Oct 13 00:43 heartbeat.json
[2025-10-13 00:43:57] -rw------- 1 boincer umatlas        95 Oct 13 00:43 pilot_heartbeat.json
[2025-10-13 00:43:57] -rw-r--r-- 1 boincer umatlas        27 Oct 13 00:43 wrapper_checkpoint.txt
[2025-10-13 00:43:57] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 00:43 boinc_mmap_file
[2025-10-13 00:43:57] -rw------- 1 boincer umatlas      4745 Oct 13 00:43 pilotlog.txt
[2025-10-13 00:43:57] -rw------- 1 boincer umatlas    657215 Oct 13 00:43 log.46676269._091316.job.log.1
[2025-10-13 00:43:57] -rw------- 1 boincer umatlas       357 Oct 13 00:43 output.list
[2025-10-13 00:43:57] -rw-r--r-- 1 boincer umatlas       620 Oct 13 00:43 runtime_log
[2025-10-13 00:43:57] -rw------- 1 boincer umatlas   1064960 Oct 13 00:43 result.tar.gz
[2025-10-13 00:43:57] -rw------- 1 boincer umatlas       659 Oct 13 00:43 zx5NDmmtJS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmXtlNDmkAgHbn.diag
[2025-10-13 00:43:57] -rw-r--r-- 1 boincer umatlas      8705 Oct 13 00:43 runtime_log.err
[2025-10-13 00:43:57] -rw-r--r-- 1 boincer umatlas     21966 Oct 13 00:43 stderr.txt
[2025-10-13 00:43:57] HITS file was successfully produced:
[2025-10-13 00:43:57] -rw------- 1 boincer umatlas 192138870 Oct 13 00:42 shared/HITS.pool.root.1
[2025-10-13 00:43:57]  *** Contents of shared directory: ***
[2025-10-13 00:43:57] total 402676
[2025-10-13 00:43:57] -rw-r--r-- 2 boincer umatlas 218539522 Oct 12 23:27 ATLAS.root_0
[2025-10-13 00:43:57] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 23:27 start_atlas.sh
[2025-10-13 00:43:57] -rw-r--r-- 2 boincer umatlas    569675 Oct 12 23:27 input.tar.gz
[2025-10-13 00:43:57] -rw------- 1 boincer umatlas 192138870 Oct 13 00:42 HITS.pool.root.1
[2025-10-13 00:43:57] -rw------- 1 boincer umatlas   1064960 Oct 13 00:43 result.tar.gz
00:43:58 (31207): run_atlas exited; CPU time 46462.169471
00:43:58 (31207): called boinc_finish(0)

</stderr_txt>
]]>

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