Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:47:24 (2737565): wrapper (7.7.26015): starting
23:47:24 (2737565): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 23:47:24] Arguments: --nthreads 8
[2025-10-12 23:47:24] Threads: 8
[2025-10-12 23:47:24] Checking for CVMFS
[2025-10-12 23:47:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 23:47:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 23:47:24] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 23:47:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 23:47:25] 2.13.2.0 941838 139007 270428 151647 2 324 32770086 32935936 15125 16776704 0 97687868 99.720 75069838 29852 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 23:47:25] CVMFS is ok
[2025-10-12 23:47:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 23:47:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 23:47:25] Further information can be found at the LHC@home message board.
[2025-10-12 23:47:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 23:47:25] Checking for apptainer binary...
[2025-10-12 23:47:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 23:47:25] Running /usr/bin/apptainer --version
[2025-10-12 23:47:25] apptainer version 1.4.3-1.el9
[2025-10-12 23:47:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 23:47:25] c-6-7.aglt2.org
[2025-10-12 23:47:25] apptainer works
[2025-10-12 23:47:25] Set ATHENA_PROC_NUMBER=8
[2025-10-12 23:47:25] Set ATHENA_CORE_NUMBER=8
[2025-10-12 23:47:25] Starting ATLAS job with PandaID=6840852592
[2025-10-12 23:47:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 11:03:28]  *** The last 200 lines of the pilot log: ***
[2025-10-13 11:03:28] 2025-10-13 15:02:20,218 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 11:03:28] 2025-10-13 15:02:20,218 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 11:03:28] 2025-10-13 15:02:20,231 | INFO     | fitting pss+swap vs Time
[2025-10-13 11:03:28] 2025-10-13 15:02:20,232 | INFO     | sum of square deviations: 89948812225.14798
[2025-10-13 11:03:28] 2025-10-13 15:02:20,245 | INFO     | sum of deviations: 104237562210.006
[2025-10-13 11:03:28] 2025-10-13 15:02:20,245 | INFO     | mean x: 1760347484.2930512
[2025-10-13 11:03:28] 2025-10-13 15:02:20,245 | INFO     | mean y: 2057959.1752265862
[2025-10-13 11:03:28] 2025-10-13 15:02:20,245 | INFO     | -- intersect: -2037928182.5642076
[2025-10-13 11:03:28] 2025-10-13 15:02:20,245 | INFO     | intersect: -2037928182.5642076
[2025-10-13 11:03:28] 2025-10-13 15:02:20,246 | INFO     | chi2: 3.7517155755953437
[2025-10-13 11:03:28] 2025-10-13 15:02:20,247 | INFO     | sum of square deviations: 87926029494.27715
[2025-10-13 11:03:28] 2025-10-13 15:02:20,259 | INFO     | sum of deviations: 174568792947.9861
[2025-10-13 11:03:28] 2025-10-13 15:02:20,259 | INFO     | mean x: 1760347331.802131
[2025-10-13 11:03:28] 2025-10-13 15:02:20,259 | INFO     | mean y: 2063238.4383561644
[2025-10-13 11:03:28] 2025-10-13 15:02:20,259 | INFO     | -- intersect: -3492939443.354609
[2025-10-13 11:03:28] 2025-10-13 15:02:20,259 | INFO     | intersect: -3492939443.354609
[2025-10-13 11:03:28] 2025-10-13 15:02:20,260 | INFO     | chi2: 2.406868119113233
[2025-10-13 11:03:28] 2025-10-13 15:02:20,260 | INFO     | current chi2=2.406868119113233 (change=35.846199675429894 %)
[2025-10-13 11:03:28] 2025-10-13 15:02:20,261 | INFO     | sum of square deviations: 85933724961.03514
[2025-10-13 11:03:28] 2025-10-13 15:02:20,279 | INFO     | sum of deviations: 165645476662.16437
[2025-10-13 11:03:28] 2025-10-13 15:02:20,279 | INFO     | mean x: 1760347179.3082821
[2025-10-13 11:03:28] 2025-10-13 15:02:20,280 | INFO     | mean y: 2062555.1733128834
[2025-10-13 11:03:28] 2025-10-13 15:02:20,280 | INFO     | -- intersect: -3391175056.016403
[2025-10-13 11:03:28] 2025-10-13 15:02:20,280 | INFO     | intersect: -3391175056.016403
[2025-10-13 11:03:28] 2025-10-13 15:02:20,281 | INFO     | chi2: 2.40053413078264
[2025-10-13 11:03:28] 2025-10-13 15:02:20,281 | INFO     | current chi2=2.40053413078264 (change=0.2631630823597541 %)
[2025-10-13 11:03:28] 2025-10-13 15:02:20,281 | INFO     | right removable region: 651
[2025-10-13 11:03:28] 2025-10-13 15:02:20,282 | INFO     | sum of square deviations: 87925426196.4506
[2025-10-13 11:03:28] 2025-10-13 15:02:20,306 | INFO     | sum of deviations: 1280962212.617939
[2025-10-13 11:03:28] 2025-10-13 15:02:20,306 | INFO     | mean x: 1760347636.8066971
[2025-10-13 11:03:28] 2025-10-13 15:02:20,306 | INFO     | mean y: 2065702.7686453576
[2025-10-13 11:03:28] 2025-10-13 15:02:20,306 | INFO     | -- intersect: -23580335.03141588
[2025-10-13 11:03:28] 2025-10-13 15:02:20,306 | INFO     | intersect: -23580335.03141588
[2025-10-13 11:03:28] 2025-10-13 15:02:20,312 | INFO     | chi2: 2.1248421998325338
[2025-10-13 11:03:28] 2025-10-13 15:02:20,312 | INFO     | current chi2=2.1248421998325338 (change=43.36345181243246 %)
[2025-10-13 11:03:28] 2025-10-13 15:02:20,313 | INFO     | sum of square deviations: 85932598880.00471
[2025-10-13 11:03:28] 2025-10-13 15:02:20,324 | INFO     | sum of deviations: 12659563367.394138
[2025-10-13 11:03:28] 2025-10-13 15:02:20,324 | INFO     | mean x: 1760347789.320552
[2025-10-13 11:03:28] 2025-10-13 15:02:20,324 | INFO     | mean y: 2064828.1273006136
[2025-10-13 11:03:28] 2025-10-13 15:02:20,324 | INFO     | -- intersect: -257269053.0540955
[2025-10-13 11:03:28] 2025-10-13 15:02:20,324 | INFO     | intersect: -257269053.0540955
[2025-10-13 11:03:28] 2025-10-13 15:02:20,325 | INFO     | chi2: 2.085411532312781
[2025-10-13 11:03:28] 2025-10-13 15:02:20,326 | INFO     | current chi2=2.085411532312781 (change=1.8556986266020288 %)
[2025-10-13 11:03:28] 2025-10-13 15:02:20,326 | INFO     | left removable region: 20
[2025-10-13 11:03:28] 2025-10-13 15:02:20,327 | INFO     | sum of square deviations: 77892921438.69734
[2025-10-13 11:03:28] 2025-10-13 15:02:20,337 | INFO     | sum of deviations: 114359561200.32959
[2025-10-13 11:03:28] 2025-10-13 15:02:20,337 | INFO     | mean x: 1760347758.8494453
[2025-10-13 11:03:28] 2025-10-13 15:02:20,337 | INFO     | mean y: 2066197.6561014263
[2025-10-13 11:03:28] 2025-10-13 15:02:20,338 | INFO     | -- intersect: -2582412514.1924663
[2025-10-13 11:03:28] 2025-10-13 15:02:20,338 | INFO     | intersect: -2582412514.1924663
[2025-10-13 11:03:28] 2025-10-13 15:02:20,339 | INFO     | chi2: 0.5872001816342519
[2025-10-13 11:03:28] 2025-10-13 15:02:20,339 | INFO     | -- intersect: -2582412514.1924663
[2025-10-13 11:03:28] 2025-10-13 15:02:20,339 | INFO     | current memory leak: 1.47 B/s (using 631 data points, chi2=0.59)
[2025-10-13 11:03:28] 2025-10-13 15:02:20,340 | INFO     | could have reported an average CPU frequency of 2600 MHz (25 samples)
[2025-10-13 11:03:28] 2025-10-13 15:02:20,340 | INFO     | ..............................
[2025-10-13 11:03:28] 2025-10-13 15:02:20,340 | INFO     | . Timing measurements:
[2025-10-13 11:03:28] 2025-10-13 15:02:20,340 | INFO     | . get job = 0 s
[2025-10-13 11:03:28] 2025-10-13 15:02:20,340 | INFO     | . initial setup = 4 s
[2025-10-13 11:03:28] 2025-10-13 15:02:20,341 | INFO     | . payload setup = 17 s
[2025-10-13 11:03:28] 2025-10-13 15:02:20,341 | INFO     | . stage-in = 0 s
[2025-10-13 11:03:28] 2025-10-13 15:02:20,341 | INFO     | . payload execution = 40360 s
[2025-10-13 11:03:28] 2025-10-13 15:02:20,341 | INFO     | . stage-out = 10 s
[2025-10-13 11:03:28] 2025-10-13 15:02:20,341 | INFO     | . log creation = 2 s
[2025-10-13 11:03:28] 2025-10-13 15:02:20,341 | INFO     | ..............................
[2025-10-13 11:03:28] 2025-10-13 15:02:20,554 | INFO     | 
[2025-10-13 11:03:28] 2025-10-13 15:02:20,554 | INFO     | job summary report
[2025-10-13 11:03:28] 2025-10-13 15:02:20,554 | INFO     | --------------------------------------------------
[2025-10-13 11:03:28] 2025-10-13 15:02:20,554 | INFO     | PanDA job id: 6840852592
[2025-10-13 11:03:28] 2025-10-13 15:02:20,554 | INFO     | task id: 46676269
[2025-10-13 11:03:28] 2025-10-13 15:02:20,554 | INFO     | errors: (none)
[2025-10-13 11:03:28] 2025-10-13 15:02:20,554 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 11:03:28] 2025-10-13 15:02:20,554 | INFO     | pilot state: finished 
[2025-10-13 11:03:28] 2025-10-13 15:02:20,555 | INFO     | transexitcode: 0
[2025-10-13 11:03:28] 2025-10-13 15:02:20,555 | INFO     | exeerrorcode: 0
[2025-10-13 11:03:28] 2025-10-13 15:02:20,555 | INFO     | exeerrordiag: 
[2025-10-13 11:03:28] 2025-10-13 15:02:20,555 | INFO     | exitcode: 0
[2025-10-13 11:03:28] 2025-10-13 15:02:20,555 | INFO     | exitmsg: OK
[2025-10-13 11:03:28] 2025-10-13 15:02:20,555 | INFO     | cpuconsumptiontime: 47296 s
[2025-10-13 11:03:28] 2025-10-13 15:02:20,555 | INFO     | nevents: 400
[2025-10-13 11:03:28] 2025-10-13 15:02:20,555 | INFO     | neventsw: 0
[2025-10-13 11:03:28] 2025-10-13 15:02:20,555 | INFO     | pid: 2748594
[2025-10-13 11:03:28] 2025-10-13 15:02:20,555 | INFO     | pgrp: 2748594
[2025-10-13 11:03:28] 2025-10-13 15:02:20,556 | INFO     | corecount: 8
[2025-10-13 11:03:28] 2025-10-13 15:02:20,556 | INFO     | event service: False
[2025-10-13 11:03:28] 2025-10-13 15:02:20,556 | INFO     | sizes: {0: 2348630, 1: 2348885, 12: 2349175, 40383: 2390932, 40394: 2399930, 40396: 2399986, 40444: 2400372}
[2025-10-13 11:03:28] 2025-10-13 15:02:20,556 | INFO     | --------------------------------------------------
[2025-10-13 11:03:28] 2025-10-13 15:02:20,556 | INFO     | 
[2025-10-13 11:03:28] 2025-10-13 15:02:20,556 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-13 11:03:28] 2025-10-13 15:02:20,611 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 11:03:28] 2025-10-13 15:02:20,612 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 11:03:28] 2025-10-13 15:02:20,612 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 11:03:28] 2025-10-13 15:02:20,612 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 11:03:28] 2025-10-13 15:02:20,612 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 11:03:28] 2025-10-13 15:02:20,612 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 11:03:28] 2025-10-13 15:02:20,612 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 11:03:28] 2025-10-13 15:02:20,612 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 11:03:28] 2025-10-13 15:02:20,612 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 11:03:28] 2025-10-13 15:02:20,612 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 11:03:28] 2025-10-13 15:02:20,613 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 11:03:28] 2025-10-13 15:02:20,613 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 11:03:28] 2025-10-13 15:02:20,613 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 11:03:28] 2025-10-13 15:02:20,613 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 11:03:28] 2025-10-13 15:02:20,613 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 11:03:28] 2025-10-13 15:02:20,613 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 11:03:28] 2025-10-13 15:02:20,613 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 11:03:28] 2025-10-13 15:02:20,613 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 11:03:28] 2025-10-13 15:02:20,614 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 11:03:28] 2025-10-13 15:02:20,614 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 11:03:28] 2025-10-13 15:02:20,614 | INFO     | job 6840852592 has completed (purged errors)
[2025-10-13 11:03:28] 2025-10-13 15:02:20,614 | INFO     | overall cleanup function is called
[2025-10-13 11:03:28] 2025-10-13 15:02:21,630 | INFO     | --- collectZombieJob: --- 10, [2748594]
[2025-10-13 11:03:28] 2025-10-13 15:02:21,630 | INFO     | zombie collector waiting for pid 2748594
[2025-10-13 11:03:28] 2025-10-13 15:02:21,630 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 11:03:28] 2025-10-13 15:02:21,630 | INFO     | collected zombie processes
[2025-10-13 11:03:28] 2025-10-13 15:02:21,631 | INFO     | will attempt to kill all subprocesses of pid=2748594
[2025-10-13 11:03:28] 2025-10-13 15:02:22,298 | INFO     | process IDs to be killed: [2748594] (in reverse order)
[2025-10-13 11:03:28] 2025-10-13 15:02:22,902 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 11:03:28] 2025-10-13 15:02:22,902 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 11:03:28] 2025-10-13 15:02:23,012 | INFO     | did not find any defunct processes belonging to 2748594
[2025-10-13 11:03:28] 2025-10-13 15:02:23,141 | INFO     | did not find any defunct processes belonging to 2748594
[2025-10-13 11:03:28] 2025-10-13 15:02:23,194 | INFO     | ready for new job
[2025-10-13 11:03:28] 2025-10-13 15:02:23,194 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 11:03:28] 2025-10-13 15:02:23,198 | INFO     | ***************************************
[2025-10-13 11:03:28] 2025-10-13 15:02:23,263 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 11:03:28] 2025-10-13 15:02:23,263 | INFO     | ***************************************
[2025-10-13 11:03:28] 2025-10-13 15:02:23,264 | INFO     | 
[2025-10-13 11:03:28] 2025-10-13 15:02:23,295 | INFO     | architecture information:
[2025-10-13 11:03:28] 2025-10-13 15:02:23,344 | INFO     | executing command: cat /etc/os-release
[2025-10-13 11:03:28] 2025-10-13 15:02:23,539 | INFO     | cat /etc/os-release:
[2025-10-13 11:03:28] NAME="CentOS Linux"
[2025-10-13 11:03:28] VERSION="7 (Core)"
[2025-10-13 11:03:28] ID="centos"
[2025-10-13 11:03:28] ID_LIKE="rhel fedora"
[2025-10-13 11:03:28] VERSION_ID="7"
[2025-10-13 11:03:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 11:03:28] ANSI_COLOR="0;31"
[2025-10-13 11:03:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 11:03:28] HOME_URL="https://www.centos.org/"
[2025-10-13 11:03:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 11:03:28] 
[2025-10-13 11:03:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 11:03:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 11:03:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 11:03:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 11:03:28] 
[2025-10-13 11:03:28] 2025-10-13 15:02:23,540 | INFO     | ***************************************
[2025-10-13 11:03:28] 2025-10-13 15:02:24,044 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-13 11:03:28] 2025-10-13 15:02:24,093 | INFO     | sufficient remaining disk space (75022467072 B)
[2025-10-13 11:03:28] 2025-10-13 15:02:24,094 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 11:03:28] 2025-10-13 15:02:24,094 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 11:03:28] 2025-10-13 15:02:24,094 | INFO     | update_server=False
[2025-10-13 11:03:28] 2025-10-13 15:02:24,094 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 11:03:28] 2025-10-13 15:02:24,094 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:03:28] 2025-10-13 15:02:24,095 | INFO     | aborting loop
[2025-10-13 11:03:28] 2025-10-13 15:02:24,095 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 11:03:28] 2025-10-13 15:02:24,248 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 11:03:28] 2025-10-13 15:02:25,049 | INFO     | all job control threads have been joined
[2025-10-13 11:03:28] 2025-10-13 15:02:25,083 | INFO     | all payload control threads have been joined
[2025-10-13 11:03:28] 2025-10-13 15:02:25,101 | INFO     | [job] retrieve thread has finished
[2025-10-13 11:03:28] 2025-10-13 15:02:25,102 | INFO     | [job] job monitor thread has finished
[2025-10-13 11:03:28] 2025-10-13 15:02:25,151 | INFO     | all data control threads have been joined
[2025-10-13 11:03:28] 2025-10-13 15:02:25,164 | INFO     | [payload] validate_post thread has finished
[2025-10-13 11:03:28] 2025-10-13 15:02:25,270 | INFO     | [data] copytool_in thread has finished
[2025-10-13 11:03:28] 2025-10-13 15:02:25,297 | INFO     | [job] validate thread has finished
[2025-10-13 11:03:28] 2025-10-13 15:02:25,604 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:03:28] 2025-10-13 15:02:26,054 | INFO     | [job] control thread has finished
[2025-10-13 11:03:28] 2025-10-13 15:02:26,089 | INFO     | [payload] control thread has finished
[2025-10-13 11:03:28] 2025-10-13 15:02:26,143 | INFO     | [payload] failed_post thread has finished
[2025-10-13 11:03:28] 2025-10-13 15:02:26,159 | INFO     | [data] control thread has finished
[2025-10-13 11:03:28] 2025-10-13 15:02:26,255 | INFO     | [data] copytool_out thread has finished
[2025-10-13 11:03:28] 2025-10-13 15:02:26,506 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 11:03:28] 2025-10-13 15:02:26,506 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 11:03:28] 2025-10-13 15:02:26,507 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 11:03:28] 2025-10-13 15:02:26,507 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 11:03:28] 2025-10-13 15:02:26,660 | INFO     | [job] queue monitor thread has finished
[2025-10-13 11:03:28] 2025-10-13 15:02:28,105 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 11:03:28] 2025-10-13 15:02:53,338 | INFO     | PID=2741799 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 11:03:28] 2025-10-13 15:02:53,338 | INFO     | .. there are 20 such processes running
[2025-10-13 11:03:28] 2025-10-13 15:02:53,338 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 11:03:28] 2025-10-13 15:02:53,338 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 11:03:28] 2025-10-13 15:02:53,339 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 11:03:28] 2025-10-13 15:02:57,520 [wrapper] supervise_pilot (15 min periods counter: 46)
[2025-10-13 11:03:28] 2025-10-13 15:03:19,432 | INFO     | [monitor] cgroup control has ended
[2025-10-13 11:03:28] 2025-10-13 15:03:20,509 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140616083085120)>', '<ExcThread(monitor, started 140615727695616)>']
[2025-10-13 11:03:28] 2025-10-13 15:03:20,551 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 11:03:28] 2025-10-13 15:03:20,551 | INFO     | [monitor] control thread has ended
[2025-10-13 11:03:28] 2025-10-13 15:03:25,536 | INFO     | all workflow threads have been joined
[2025-10-13 11:03:28] 2025-10-13 15:03:25,536 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 11:03:28] 2025-10-13 15:03:25,537 | INFO     | traces error code: 0
[2025-10-13 11:03:28] 2025-10-13 15:03:25,537 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 11:03:28] 2025-10-13 15:03:26,408 [wrapper] ==== pilot stdout END ====
[2025-10-13 11:03:28] 2025-10-13 15:03:26,427 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 11:03:28] 2025-10-13 15:03:26,490 [wrapper] pilotpid: 2741799
[2025-10-13 11:03:28] 2025-10-13 15:03:26,507 [wrapper] Pilot exit status: 0
[2025-10-13 11:03:28] 2025-10-13 15:03:26,677 [wrapper] pandaids: 6840852592
[2025-10-13 11:03:28] 2025-10-13 15:03:26,744 [wrapper] cleanup supervisor_pilot  551191 2741800
[2025-10-13 11:03:28] 2025-10-13 15:03:26,747 [wrapper] Test setup, not cleaning
[2025-10-13 11:03:28] 2025-10-13 15:03:26,750 [wrapper] apfmon messages muted
[2025-10-13 11:03:28] 2025-10-13 15:03:26,753 [wrapper] ==== wrapper stdout END ====
[2025-10-13 11:03:28] 2025-10-13 15:03:26,756 [wrapper] ==== wrapper stderr END ====
[2025-10-13 11:03:28]  *** Error codes and diagnostics ***
[2025-10-13 11:03:28]     "exeErrorCode": 0,
[2025-10-13 11:03:28]     "exeErrorDiag": "",
[2025-10-13 11:03:28]     "pilotErrorCode": 0,
[2025-10-13 11:03:28]     "pilotErrorDiag": "",
[2025-10-13 11:03:28]  *** Listing of results directory ***
[2025-10-13 11:03:28] total 416204
[2025-10-13 11:03:28] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 17:57 pilot3.tar.gz
[2025-10-13 11:03:28] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 18:43 queuedata.json
[2025-10-13 11:03:28] -rwx------. 1 boincer umatlas     36292 Oct 12 18:44 runpilot2-wrapper.sh
[2025-10-13 11:03:28] -rw-r--r--. 1 boincer umatlas       100 Oct 12 23:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 11:03:28] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 23:47 run_atlas
[2025-10-13 11:03:28] -rw-r--r--. 1 boincer umatlas       105 Oct 12 23:47 job.xml
[2025-10-13 11:03:28] -rw-r--r--. 2 boincer umatlas 224351694 Oct 12 23:47 EVNT.46676267._004628.pool.root.1
[2025-10-13 11:03:28] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 23:47 shared
[2025-10-13 11:03:28] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 23:47 input.tar.gz
[2025-10-13 11:03:28] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 23:47 start_atlas.sh
[2025-10-13 11:03:28] -rw-r--r--. 1 boincer umatlas         0 Oct 12 23:47 boinc_lockfile
[2025-10-13 11:03:28] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 23:47 pandaJob.out
[2025-10-13 11:03:28] -rw-------. 1 boincer umatlas    974373 Oct 12 23:47 agis_schedconf.cvmfs.json
[2025-10-13 11:03:28] drwx------. 5 boincer umatlas      4096 Oct 12 23:47 pilot3
[2025-10-13 11:03:28] -rw-r--r--. 1 boincer umatlas      6657 Oct 13 10:55 init_data.xml
[2025-10-13 11:03:28] -rw-------. 1 boincer umatlas 187501665 Oct 13 10:59 HITS.46676269._091421.pool.root.1
[2025-10-13 11:03:28] -rw-r--r--. 1 boincer umatlas       531 Oct 13 10:59 boinc_task_state.xml
[2025-10-13 11:03:28] -rw-------. 1 boincer umatlas      1043 Oct 13 11:01 memory_monitor_summary.json
[2025-10-13 11:03:28] -rw-------. 1 boincer umatlas   1560580 Oct 13 11:01 agis_ddmendpoints.agis.ALL.json
[2025-10-13 11:03:28] -rw-------. 1 boincer umatlas    759560 Oct 13 11:01 log.46676269._091421.job.log.tgz.1
[2025-10-13 11:03:28] -rw-------. 1 boincer umatlas        95 Oct 13 11:02 pilot_heartbeat.json
[2025-10-13 11:03:28] -rw-------. 1 boincer umatlas      7827 Oct 13 11:02 heartbeat.json
[2025-10-13 11:03:28] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 11:03 boinc_mmap_file
[2025-10-13 11:03:28] -rw-------. 1 boincer umatlas      4824 Oct 13 11:03 pilotlog.txt
[2025-10-13 11:03:28] -rw-r--r--. 1 boincer umatlas        28 Oct 13 11:03 wrapper_checkpoint.txt
[2025-10-13 11:03:28] -rw-------. 1 boincer umatlas   4460180 Oct 13 11:03 log.46676269._091421.job.log.1
[2025-10-13 11:03:28] -rw-------. 1 boincer umatlas       357 Oct 13 11:03 output.list
[2025-10-13 11:03:28] -rw-r--r--. 1 boincer umatlas       620 Oct 13 11:03 runtime_log
[2025-10-13 11:03:28] -rw-------. 1 boincer umatlas   5242880 Oct 13 11:03 result.tar.gz
[2025-10-13 11:03:28] -rw-r--r--. 1 boincer umatlas      8689 Oct 13 11:03 runtime_log.err
[2025-10-13 11:03:28] -rw-------. 1 boincer umatlas       655 Oct 13 11:03 kHLODmpyJS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWulNDmkzJBSo.diag
[2025-10-13 11:03:28] -rw-r--r--. 1 boincer umatlas     20724 Oct 13 11:03 stderr.txt
[2025-10-13 11:03:28] HITS file was successfully produced:
[2025-10-13 11:03:28] -rw-------. 1 boincer umatlas 187501665 Oct 13 10:59 shared/HITS.pool.root.1
[2025-10-13 11:03:28]  *** Contents of shared directory: ***
[2025-10-13 11:03:28] total 407904
[2025-10-13 11:03:28] -rw-r--r--. 2 boincer umatlas 224351694 Oct 12 23:47 ATLAS.root_0
[2025-10-13 11:03:28] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 23:47 input.tar.gz
[2025-10-13 11:03:28] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 23:47 start_atlas.sh
[2025-10-13 11:03:28] -rw-------. 1 boincer umatlas 187501665 Oct 13 10:59 HITS.pool.root.1
[2025-10-13 11:03:28] -rw-------. 1 boincer umatlas   5242880 Oct 13 11:03 result.tar.gz
11:03:29 (2737565): run_atlas exited; CPU time 48662.568947
11:03:29 (2737565): called boinc_finish(0)

</stderr_txt>
]]>

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