Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
16:56:53 (3206654): wrapper (7.7.26015): starting
16:56:53 (3206654): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 16:56:53] Arguments: --nthreads 4
[2025-10-13 16:56:53] Threads: 4
[2025-10-13 16:56:53] Checking for CVMFS
[2025-10-13 16:56:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 16:56:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 16:56:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 16:56:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 16:56:53] 2.13.1.0 3088660 151 50812 151664 1 188 2898040 4096001 922 130560 0 362789 99.996 5408 1859 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-13 16:56:53] CVMFS is ok
[2025-10-13 16:56:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 16:56:53] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-13 16:56:53] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-13 16:56:53] Further information can be found at the LHC@home message board.
[2025-10-13 16:56:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 16:56:53] Checking for apptainer binary...
[2025-10-13 16:56:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 16:56:53] Running /usr/bin/apptainer --version
[2025-10-13 16:56:53] apptainer version 1.2.3
[2025-10-13 16:56:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 16:56:53] Ryzen-7-7700-Zen4-Deb12
[2025-10-13 16:56:53] apptainer works
[2025-10-13 16:56:53] Set ATHENA_PROC_NUMBER=4
[2025-10-13 16:56:53] Set ATHENA_CORE_NUMBER=4
[2025-10-13 16:56:53] Starting ATLAS job with PandaID=6840852448
[2025-10-13 16:56:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 18:10:10]  *** The last 200 lines of the pilot log: ***
[2025-10-13 18:10:10]  is_altstaged=None
[2025-10-13 18:10:10]  is_tar=False
[2025-10-13 18:10:10]  lfn=log.46676269._091277.job.log.tgz.1
[2025-10-13 18:10:10]  mtime=0
[2025-10-13 18:10:10]  protocol_id=None
[2025-10-13 18:10:10]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 18:10:10]  replicas=None
[2025-10-13 18:10:10]  scope=mc23_13p6TeV
[2025-10-13 18:10:10]  status=None
[2025-10-13 18:10:10]  status_code=0
[2025-10-13 18:10:10]  storage_token=
[2025-10-13 18:10:10]  surl=/var/lib/boinc-client/slots/2/PanDA_Pilot-6840852448/log.46676269._091277.job.log.tgz.1
[2025-10-13 18:10:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/48/49/log.46676269._091277.job.log.tgz.1
[2025-10-13 18:10:10]  workdir=None
[2025-10-13 18:10:10] ]
[2025-10-13 18:10:10] 2025-10-13 16:09:24,381 | INFO     | transferring file log.46676269._091277.job.log.tgz.1 from /var/lib/boinc-client/slots/2/PanDA_Pilot-6840852448/log.46676269._091277.job.log.tgz.1 to /var/lib/boinc
[2025-10-13 18:10:10] 2025-10-13 16:09:24,381 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/2/PanDA_Pilot-6840852448/log.46676269._091277.job.log.tgz.1 /var/lib/boinc-client/slots/2/log.466762
[2025-10-13 18:10:10] 2025-10-13 16:09:24,413 | INFO     | adding to output.list: log.46676269._091277.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/48/49/log.46676269._091277.job.log.tg
[2025-10-13 18:10:10] 2025-10-13 16:09:24,414 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 18:10:10] 2025-10-13 16:09:24,414 | INFO     | summary of transferred files:
[2025-10-13 18:10:10] 2025-10-13 16:09:24,414 | INFO     |  -- lfn=log.46676269._091277.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 18:10:10] 2025-10-13 16:09:24,414 | INFO     | stage-out finished correctly
[2025-10-13 18:10:10] 2025-10-13 16:09:25,609 | INFO     | time since job start (4347s) is within the limit (172800.0s)
[2025-10-13 18:10:10] 2025-10-13 16:09:25,873 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 18:10:10] 2025-10-13 16:09:26,142 | INFO     | job 6840852448 has state=finished
[2025-10-13 18:10:10] 2025-10-13 16:09:26,142 | INFO     | preparing for final server update for job 6840852448 in state='finished'
[2025-10-13 18:10:10] 2025-10-13 16:09:26,142 | INFO     | this job has now completed (state=finished)
[2025-10-13 18:10:10] 2025-10-13 16:09:26,142 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 18:10:10] 2025-10-13 16:09:26,142 | INFO     | log transfer has been attempted: DONE
[2025-10-13 18:10:10] 2025-10-13 16:09:26,142 | INFO     | job 6840852448 has finished - writing final server update
[2025-10-13 18:10:10] 2025-10-13 16:09:26,142 | INFO     | total number of processed events: 400 (read)
[2025-10-13 18:10:10] 2025-10-13 16:09:26,143 | INFO     | executing command: lscpu
[2025-10-13 18:10:10] 2025-10-13 16:09:26,155 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 18:10:10] 2025-10-13 16:09:26,176 | INFO     | monitor loop #334: job 0:6840852448 is in state 'finished'
[2025-10-13 18:10:10] 2025-10-13 16:09:26,177 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 18:10:10] 2025-10-13 16:09:27,613 | INFO     | time since job start (4349s) is within the limit (172800.0s)
[2025-10-13 18:10:10] 2025-10-13 16:09:27,804 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 18:10:10] 2025-10-13 16:09:27,805 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4926.089249999999
[2025-10-13 18:10:10] 2025-10-13 16:09:27,806 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6840852448/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 18:10:10] 2025-10-13 16:09:27,807 | INFO     | extracted standard info from prmon json
[2025-10-13 18:10:10] 2025-10-13 16:09:27,807 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 18:10:10] 2025-10-13 16:09:27,807 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 18:10:10] 2025-10-13 16:09:27,807 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 18:10:10] 2025-10-13 16:09:27,807 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 18:10:10] 2025-10-13 16:09:27,808 | INFO     | fitting pss+swap vs Time
[2025-10-13 18:10:10] 2025-10-13 16:09:27,808 | INFO     | sum of square deviations: 81266640.0
[2025-10-13 18:10:10] 2025-10-13 16:09:27,808 | INFO     | sum of deviations: -3056643937.0
[2025-10-13 18:10:10] 2025-10-13 16:09:27,808 | INFO     | mean x: 1760369662.5
[2025-10-13 18:10:10] 2025-10-13 16:09:27,808 | INFO     | mean y: 2403225.6875
[2025-10-13 18:10:10] 2025-10-13 16:09:27,808 | INFO     | -- intersect: 66214360010.89926
[2025-10-13 18:10:10] 2025-10-13 16:09:27,808 | INFO     | intersect: 66214360010.89926
[2025-10-13 18:10:10] 2025-10-13 16:09:27,808 | INFO     | chi2: 0.036178463722376125
[2025-10-13 18:10:10] 2025-10-13 16:09:27,808 | INFO     | -- intersect: 66214360010.89926
[2025-10-13 18:10:10] 2025-10-13 16:09:27,808 | INFO     | current memory leak: -37.61 B/s (using 64 data points, chi2=0.04)
[2025-10-13 18:10:10] 2025-10-13 16:09:27,808 | INFO     | could have reported an average CPU frequency of 4911 MHz (6 samples)
[2025-10-13 18:10:10] 2025-10-13 16:09:27,808 | INFO     | ..............................
[2025-10-13 18:10:10] 2025-10-13 16:09:27,809 | INFO     | . Timing measurements:
[2025-10-13 18:10:10] 2025-10-13 16:09:27,809 | INFO     | . get job = 0 s
[2025-10-13 18:10:10] 2025-10-13 16:09:27,809 | INFO     | . initial setup = 1 s
[2025-10-13 18:10:10] 2025-10-13 16:09:27,809 | INFO     | . payload setup = 2 s
[2025-10-13 18:10:10] 2025-10-13 16:09:27,809 | INFO     | . stage-in = 0 s
[2025-10-13 18:10:10] 2025-10-13 16:09:27,809 | INFO     | . payload execution = 4326 s
[2025-10-13 18:10:10] 2025-10-13 16:09:27,809 | INFO     | . stage-out = 0 s
[2025-10-13 18:10:10] 2025-10-13 16:09:27,810 | INFO     | . log creation = 0 s
[2025-10-13 18:10:10] 2025-10-13 16:09:27,810 | INFO     | ..............................
[2025-10-13 18:10:10] 2025-10-13 16:09:28,088 | INFO     | 
[2025-10-13 18:10:10] 2025-10-13 16:09:28,089 | INFO     | job summary report
[2025-10-13 18:10:10] 2025-10-13 16:09:28,089 | INFO     | --------------------------------------------------
[2025-10-13 18:10:10] 2025-10-13 16:09:28,089 | INFO     | PanDA job id: 6840852448
[2025-10-13 18:10:10] 2025-10-13 16:09:28,089 | INFO     | task id: 46676269
[2025-10-13 18:10:10] 2025-10-13 16:09:28,089 | INFO     | errors: (none)
[2025-10-13 18:10:10] 2025-10-13 16:09:28,089 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 18:10:10] 2025-10-13 16:09:28,089 | INFO     | pilot state: finished 
[2025-10-13 18:10:10] 2025-10-13 16:09:28,089 | INFO     | transexitcode: 0
[2025-10-13 18:10:10] 2025-10-13 16:09:28,089 | INFO     | exeerrorcode: 0
[2025-10-13 18:10:10] 2025-10-13 16:09:28,089 | INFO     | exeerrordiag: 
[2025-10-13 18:10:10] 2025-10-13 16:09:28,089 | INFO     | exitcode: 0
[2025-10-13 18:10:10] 2025-10-13 16:09:28,089 | INFO     | exitmsg: OK
[2025-10-13 18:10:10] 2025-10-13 16:09:28,089 | INFO     | cpuconsumptiontime: 16820 s
[2025-10-13 18:10:10] 2025-10-13 16:09:28,089 | INFO     | nevents: 400
[2025-10-13 18:10:10] 2025-10-13 16:09:28,089 | INFO     | neventsw: 0
[2025-10-13 18:10:10] 2025-10-13 16:09:28,089 | INFO     | pid: 3217089
[2025-10-13 18:10:10] 2025-10-13 16:09:28,089 | INFO     | pgrp: 3217089
[2025-10-13 18:10:10] 2025-10-13 16:09:28,089 | INFO     | corecount: 4
[2025-10-13 18:10:10] 2025-10-13 16:09:28,089 | INFO     | event service: False
[2025-10-13 18:10:10] 2025-10-13 16:09:28,089 | INFO     | sizes: {0: 2348864, 2: 2349126, 11: 2349154, 4332: 2375371, 4333: 2384383, 4335: 2384439, 4337: 2384761}
[2025-10-13 18:10:10] 2025-10-13 16:09:28,089 | INFO     | --------------------------------------------------
[2025-10-13 18:10:10] 2025-10-13 16:09:28,089 | INFO     | 
[2025-10-13 18:10:10] 2025-10-13 16:09:28,089 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2025-10-13 18:10:10] 2025-10-13 16:09:28,100 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 18:10:10] 2025-10-13 16:09:28,100 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 18:10:10] 2025-10-13 16:09:28,100 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 18:10:10] 2025-10-13 16:09:28,100 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 18:10:10] 2025-10-13 16:09:28,100 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 18:10:10] 2025-10-13 16:09:28,100 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 18:10:10] 2025-10-13 16:09:28,100 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 18:10:10] 2025-10-13 16:09:28,100 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 18:10:10] 2025-10-13 16:09:28,100 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 18:10:10] 2025-10-13 16:09:28,100 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 18:10:10] 2025-10-13 16:09:28,100 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 18:10:10] 2025-10-13 16:09:28,100 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 18:10:10] 2025-10-13 16:09:28,100 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 18:10:10] 2025-10-13 16:09:28,100 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 18:10:10] 2025-10-13 16:09:28,100 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 18:10:10] 2025-10-13 16:09:28,100 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 18:10:10] 2025-10-13 16:09:28,100 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 18:10:10] 2025-10-13 16:09:28,100 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 18:10:10] 2025-10-13 16:09:28,100 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 18:10:10] 2025-10-13 16:09:28,100 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 18:10:10] 2025-10-13 16:09:28,100 | INFO     | job 6840852448 has completed (purged errors)
[2025-10-13 18:10:10] 2025-10-13 16:09:28,100 | INFO     | overall cleanup function is called
[2025-10-13 18:10:10] 2025-10-13 16:09:29,104 | INFO     | --- collectZombieJob: --- 10, [3217089]
[2025-10-13 18:10:10] 2025-10-13 16:09:29,105 | INFO     | zombie collector waiting for pid 3217089
[2025-10-13 18:10:10] 2025-10-13 16:09:29,105 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 18:10:10] 2025-10-13 16:09:29,105 | INFO     | collected zombie processes
[2025-10-13 18:10:10] 2025-10-13 16:09:29,105 | INFO     | will attempt to kill all subprocesses of pid=3217089
[2025-10-13 18:10:10] 2025-10-13 16:09:29,134 | INFO     | process IDs to be killed: [3217089] (in reverse order)
[2025-10-13 18:10:10] 2025-10-13 16:09:29,156 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 18:10:10] 2025-10-13 16:09:29,156 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 18:10:10] 2025-10-13 16:09:29,157 | INFO     | did not find any defunct processes belonging to 3217089
[2025-10-13 18:10:10] 2025-10-13 16:09:29,158 | INFO     | did not find any defunct processes belonging to 3217089
[2025-10-13 18:10:10] 2025-10-13 16:09:29,158 | INFO     | ready for new job
[2025-10-13 18:10:10] 2025-10-13 16:09:29,158 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 18:10:10] 2025-10-13 16:09:29,159 | INFO     | ***************************************
[2025-10-13 18:10:10] 2025-10-13 16:09:29,159 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 18:10:10] 2025-10-13 16:09:29,159 | INFO     | ***************************************
[2025-10-13 18:10:10] 2025-10-13 16:09:29,159 | INFO     | 
[2025-10-13 18:10:10] 2025-10-13 16:09:29,160 | INFO     | architecture information:
[2025-10-13 18:10:10] 2025-10-13 16:09:29,160 | INFO     | executing command: cat /etc/os-release
[2025-10-13 18:10:10] 2025-10-13 16:09:29,168 | INFO     | cat /etc/os-release:
[2025-10-13 18:10:10] NAME="CentOS Linux"
[2025-10-13 18:10:10] VERSION="7 (Core)"
[2025-10-13 18:10:10] ID="centos"
[2025-10-13 18:10:10] ID_LIKE="rhel fedora"
[2025-10-13 18:10:10] VERSION_ID="7"
[2025-10-13 18:10:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 18:10:10] ANSI_COLOR="0;31"
[2025-10-13 18:10:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 18:10:10] HOME_URL="https://www.centos.org/"
[2025-10-13 18:10:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 18:10:10] 
[2025-10-13 18:10:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 18:10:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 18:10:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 18:10:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 18:10:10] 
[2025-10-13 18:10:10] 2025-10-13 16:09:29,168 | INFO     | ***************************************
[2025-10-13 18:10:10] 2025-10-13 16:09:29,669 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2025-10-13 18:10:10] 2025-10-13 16:09:29,678 | INFO     | sufficient remaining disk space (885545500672 B)
[2025-10-13 18:10:10] 2025-10-13 16:09:29,678 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 18:10:10] 2025-10-13 16:09:29,678 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 18:10:10] 2025-10-13 16:09:29,678 | INFO     | update_server=False
[2025-10-13 18:10:10] 2025-10-13 16:09:29,678 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 18:10:10] 2025-10-13 16:09:29,678 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 18:10:10] 2025-10-13 16:09:29,684 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 18:10:10] 2025-10-13 16:09:29,684 | INFO     | aborting loop
[2025-10-13 18:10:10] 2025-10-13 16:09:29,712 | INFO     | all data control threads have been joined
[2025-10-13 18:10:10] 2025-10-13 16:09:29,956 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 18:10:10] 2025-10-13 16:09:30,360 | INFO     | all payload control threads have been joined
[2025-10-13 18:10:10] 2025-10-13 16:09:30,680 | INFO     | [job] queue monitor thread has finished
[2025-10-13 18:10:10] 2025-10-13 16:09:30,683 | INFO     | [job] retrieve thread has finished
[2025-10-13 18:10:10] 2025-10-13 16:09:30,688 | INFO     | [job] job monitor thread has finished
[2025-10-13 18:10:10] 2025-10-13 16:09:30,716 | INFO     | [data] control thread has finished
[2025-10-13 18:10:10] 2025-10-13 16:09:30,749 | INFO     | [job] validate thread has finished
[2025-10-13 18:10:10] 2025-10-13 16:09:30,760 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 18:10:10] 2025-10-13 16:09:30,761 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 18:10:10] 2025-10-13 16:09:30,931 | INFO     | all job control threads have been joined
[2025-10-13 18:10:10] 2025-10-13 16:09:31,152 | INFO     | [data] copytool_in thread has finished
[2025-10-13 18:10:10] 2025-10-13 16:09:31,212 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 18:10:10] 2025-10-13 16:09:31,248 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 18:10:10] 2025-10-13 16:09:31,366 | INFO     | [payload] control thread has finished
[2025-10-13 18:10:10] 2025-10-13 16:09:31,768 | INFO     | [payload] failed_post thread has finished
[2025-10-13 18:10:10] 2025-10-13 16:09:31,770 | INFO     | [payload] validate_post thread has finished
[2025-10-13 18:10:10] 2025-10-13 16:09:31,912 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 18:10:10] 2025-10-13 16:09:31,932 | INFO     | [job] control thread has finished
[2025-10-13 18:10:10] 2025-10-13 16:09:31,962 | INFO     | [data] copytool_out thread has finished
[2025-10-13 18:10:10] 2025-10-13 16:09:35,916 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 18:10:10] 2025-10-13 16:10:00,700 | INFO     | PID=3210403 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 18:10:10] 2025-10-13 16:10:00,700 | INFO     | .. there are 2 such processes running
[2025-10-13 18:10:10] 2025-10-13 16:10:00,700 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 18:10:10] 2025-10-13 16:10:00,700 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 18:10:10] 2025-10-13 16:10:00,701 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 18:10:10] 2025-10-13 16:10:04,924 | INFO     | [monitor] cgroup control has ended
[2025-10-13 18:10:10] 2025-10-13 16:10:05,374 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140041212946240)>', '<ExcThread(monitor, started 140040294364928)>']
[2025-10-13 18:10:10] 2025-10-13 16:10:05,720 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 18:10:10] 2025-10-13 16:10:05,721 | INFO     | [monitor] control thread has ended
[2025-10-13 18:10:10] 2025-10-13 16:10:10,396 | INFO     | all workflow threads have been joined
[2025-10-13 18:10:10] 2025-10-13 16:10:10,397 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 18:10:10] 2025-10-13 16:10:10,397 | INFO     | traces error code: 0
[2025-10-13 18:10:10] 2025-10-13 16:10:10,397 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 18:10:10] 2025-10-13 16:10:10,482 [wrapper] ==== pilot stdout END ====
[2025-10-13 18:10:10] 2025-10-13 16:10:10,483 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 18:10:10] 2025-10-13 16:10:10,484 [wrapper] pilotpid: 3210403
[2025-10-13 18:10:10] 2025-10-13 16:10:10,485 [wrapper] Pilot exit status: 0
[2025-10-13 18:10:10] 2025-10-13 16:10:10,488 [wrapper] pandaids: 6840852448
[2025-10-13 18:10:10] 2025-10-13 16:10:10,499 [wrapper] cleanup supervisor_pilot 3232998 3210404
[2025-10-13 18:10:10] 2025-10-13 16:10:10,500 [wrapper] Test setup, not cleaning
[2025-10-13 18:10:10] 2025-10-13 16:10:10,501 [wrapper] apfmon messages muted
[2025-10-13 18:10:10] 2025-10-13 16:10:10,502 [wrapper] ==== wrapper stdout END ====
[2025-10-13 18:10:10] 2025-10-13 16:10:10,503 [wrapper] ==== wrapper stderr END ====
[2025-10-13 18:10:10]  *** Error codes and diagnostics ***
[2025-10-13 18:10:10]     "exeErrorCode": 0,
[2025-10-13 18:10:10]     "exeErrorDiag": "",
[2025-10-13 18:10:10]     "pilotErrorCode": 0,
[2025-10-13 18:10:10]     "pilotErrorDiag": "",
[2025-10-13 18:10:10]  *** Listing of results directory ***
[2025-10-13 18:10:10] total 411228
[2025-10-13 18:10:10] -rw-r--r-- 1 boinc boinc    557409 Oct 12 23:57 pilot3.tar.gz
[2025-10-13 18:10:10] -rw-r--r-- 1 boinc boinc      5112 Oct 13 00:39 queuedata.json
[2025-10-13 18:10:10] -rwx------ 1 boinc boinc     36292 Oct 13 00:41 runpilot2-wrapper.sh
[2025-10-13 18:10:10] -rw-r--r-- 1 boinc boinc       100 Oct 13 16:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 18:10:10] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 16:56 run_atlas
[2025-10-13 18:10:10] -rw-r--r-- 1 boinc boinc       105 Oct 13 16:56 job.xml
[2025-10-13 18:10:10] -rw-r--r-- 2 boinc boinc     15120 Oct 13 16:56 start_atlas.sh
[2025-10-13 18:10:10] drwxrwx--x 2 boinc boinc      4096 Oct 13 16:56 shared
[2025-10-13 18:10:10] -rw-r--r-- 2 boinc boinc    569685 Oct 13 16:56 input.tar.gz
[2025-10-13 18:10:10] -rw-r--r-- 1 boinc boinc      6737 Oct 13 16:56 init_data.xml
[2025-10-13 18:10:10] -rw-r--r-- 2 boinc boinc 221573438 Oct 13 16:56 EVNT.46676267._004622.pool.root.1
[2025-10-13 18:10:10] -rw-r--r-- 1 boinc boinc         0 Oct 13 16:56 boinc_lockfile
[2025-10-13 18:10:10] -rw-r--r-- 1 boinc boinc      2550 Oct 13 16:56 pandaJob.out
[2025-10-13 18:10:10] -rw------- 1 boinc boinc    972791 Oct 13 16:56 agis_schedconf.cvmfs.json
[2025-10-13 18:10:10] -rw------- 1 boinc boinc   1560580 Oct 13 16:56 agis_ddmendpoints.agis.ALL.json
[2025-10-13 18:10:10] drwx------ 5 boinc boinc      4096 Oct 13 16:56 pilot3
[2025-10-13 18:10:10] -rw-r--r-- 1 boinc boinc       529 Oct 13 18:09 boinc_task_state.xml
[2025-10-13 18:10:10] -rw------- 1 boinc boinc 193735356 Oct 13 18:09 HITS.46676269._091277.pool.root.1
[2025-10-13 18:10:10] -rw------- 1 boinc boinc        95 Oct 13 18:09 pilot_heartbeat.json
[2025-10-13 18:10:10] -rw------- 1 boinc boinc      1013 Oct 13 18:09 memory_monitor_summary.json
[2025-10-13 18:10:10] -rw------- 1 boinc boinc    277627 Oct 13 18:09 log.46676269._091277.job.log.tgz.1
[2025-10-13 18:10:10] -rw------- 1 boinc boinc      7746 Oct 13 18:09 heartbeat.json
[2025-10-13 18:10:10] -rw-r--r-- 1 boinc boinc        27 Oct 13 18:10 wrapper_checkpoint.txt
[2025-10-13 18:10:10] -rw-r--r-- 1 boinc boinc      8192 Oct 13 18:10 boinc_mmap_file
[2025-10-13 18:10:10] -rw------- 1 boinc boinc      4831 Oct 13 18:10 pilotlog.txt
[2025-10-13 18:10:10] -rw------- 1 boinc boinc    664550 Oct 13 18:10 log.46676269._091277.job.log.1
[2025-10-13 18:10:10] -rw------- 1 boinc boinc       357 Oct 13 18:10 output.list
[2025-10-13 18:10:10] -rw-r--r-- 1 boinc boinc       620 Oct 13 18:10 runtime_log
[2025-10-13 18:10:10] -rw------- 1 boinc boinc    962560 Oct 13 18:10 result.tar.gz
[2025-10-13 18:10:10] -rw-r--r-- 1 boinc boinc      8826 Oct 13 18:10 runtime_log.err
[2025-10-13 18:10:10] -rw------- 1 boinc boinc       655 Oct 13 18:10 J8oKDmkvJS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5tlNDmxksfvn.diag
[2025-10-13 18:10:10] -rw-r--r-- 1 boinc boinc     21534 Oct 13 18:10 stderr.txt
[2025-10-13 18:10:10] HITS file was successfully produced:
[2025-10-13 18:10:10] -rw------- 1 boinc boinc 193735356 Oct 13 18:09 shared/HITS.pool.root.1
[2025-10-13 18:10:10]  *** Contents of shared directory: ***
[2025-10-13 18:10:10] total 407104
[2025-10-13 18:10:10] -rw-r--r-- 2 boinc boinc     15120 Oct 13 16:56 start_atlas.sh
[2025-10-13 18:10:10] -rw-r--r-- 2 boinc boinc    569685 Oct 13 16:56 input.tar.gz
[2025-10-13 18:10:10] -rw-r--r-- 2 boinc boinc 221573438 Oct 13 16:56 ATLAS.root_0
[2025-10-13 18:10:10] -rw------- 1 boinc boinc 193735356 Oct 13 18:09 HITS.pool.root.1
[2025-10-13 18:10:10] -rw------- 1 boinc boinc    962560 Oct 13 18:10 result.tar.gz
18:10:12 (3206654): run_atlas exited; CPU time 16833.736682
18:10:12 (3206654): called boinc_finish(0)

</stderr_txt>
]]>

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