Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:50:33 (3516929): wrapper (7.7.26015): starting
13:50:33 (3516929): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 13:50:33] Arguments: --nthreads 3
[2025-10-13 13:50:33] Threads: 3
[2025-10-13 13:50:33] Checking for CVMFS
[2025-10-13 13:50:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 13:50:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 13:50:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 13:50:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 13:50:33] 2.9.2.0 2127501 4484 82872 151660 1 57 29153870 36864001 0 130560 0 3650260 99.987 280334 1219 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 13:50:33] CVMFS is ok
[2025-10-13 13:50:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 13:50:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 13:50:33] Further information can be found at the LHC@home message board.
[2025-10-13 13:50:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 13:50:33] Checking for apptainer binary...
[2025-10-13 13:50:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 13:50:33] Running /usr/bin/apptainer --version
[2025-10-13 13:50:33] apptainer version 1.4.1-1.1
[2025-10-13 13:50:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 13:50:33] thA385
[2025-10-13 13:50:33] apptainer works
[2025-10-13 13:50:33] Set ATHENA_PROC_NUMBER=3
[2025-10-13 13:50:33] Set ATHENA_CORE_NUMBER=3
[2025-10-13 13:50:33] Starting ATLAS job with PandaID=6840852504
[2025-10-13 13:50:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 15:13:05]  *** The last 200 lines of the pilot log: ***
[2025-10-13 15:13:05] NAME="CentOS Linux"
[2025-10-13 15:13:05] VERSION="7 (Core)"
[2025-10-13 15:13:05] ID="centos"
[2025-10-13 15:13:05] ID_LIKE="rhel fedora"
[2025-10-13 15:13:05] VERSION_ID="7"
[2025-10-13 15:13:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 15:13:05] ANSI_COLOR="0;31"
[2025-10-13 15:13:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 15:13:05] HOME_URL="https://www.centos.org/"
[2025-10-13 15:13:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 15:13:05] 
[2025-10-13 15:13:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 15:13:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 15:13:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 15:13:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 15:13:05] 
[2025-10-13 15:13:05] 2025-10-13 13:12:33,839 | INFO     | ***************************************
[2025-10-13 15:13:05] 2025-10-13 13:12:34,342 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 15:13:05] 2025-10-13 13:12:34,354 | INFO     | sufficient remaining disk space (376417812480 B)
[2025-10-13 15:13:05] 2025-10-13 13:12:34,354 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 15:13:05] 2025-10-13 13:12:34,354 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 15:13:05] 2025-10-13 13:12:34,354 | INFO     | update_server=False
[2025-10-13 15:13:05] 2025-10-13 13:12:34,354 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 15:13:05] 2025-10-13 13:12:34,354 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 15:13:05] 2025-10-13 13:12:34,354 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 15:13:05] 2025-10-13 13:12:34,358 | INFO     | all job control threads have been joined
[2025-10-13 15:13:05] 2025-10-13 13:12:34,502 | INFO     | all data control threads have been joined
[2025-10-13 15:13:05] 2025-10-13 13:12:34,682 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 15:13:05] 2025-10-13 13:12:34,683 | INFO     | aborting loop
[2025-10-13 15:13:05] 2025-10-13 13:12:34,716 | INFO     | all payload control threads have been joined
[2025-10-13 15:13:05] 2025-10-13 13:12:35,360 | INFO     | [job] retrieve thread has finished
[2025-10-13 15:13:05] 2025-10-13 13:12:35,360 | INFO     | [job] queue monitor thread has finished
[2025-10-13 15:13:05] 2025-10-13 13:12:35,363 | INFO     | [job] control thread has finished
[2025-10-13 15:13:05] 2025-10-13 13:12:35,508 | INFO     | [data] control thread has finished
[2025-10-13 15:13:05] 2025-10-13 13:12:35,586 | INFO     | [payload] validate_post thread has finished
[2025-10-13 15:13:05] 2025-10-13 13:12:35,688 | INFO     | [job] job monitor thread has finished
[2025-10-13 15:13:05] 2025-10-13 13:12:35,690 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 15:13:05] 2025-10-13 13:12:35,722 | INFO     | [payload] control thread has finished
[2025-10-13 15:13:05] 2025-10-13 13:12:36,260 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 15:13:05] 2025-10-13 13:12:36,357 | INFO     | [data] copytool_out thread has finished
[2025-10-13 15:13:05] 2025-10-13 13:12:36,472 | INFO     | [payload] failed_post thread has finished
[2025-10-13 15:13:05] 2025-10-13 13:12:36,481 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 15:13:05] 2025-10-13 13:12:36,697 | INFO     | [data] copytool_in thread has finished
[2025-10-13 15:13:05] 2025-10-13 13:12:36,749 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 15:13:05] 2025-10-13 13:12:36,763 | INFO     | [job] validate thread has finished
[2025-10-13 15:13:05] 2025-10-13 13:12:39,696 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 15:13:05] 2025-10-13 13:12:44,517 | INFO     | job.realtimelogging is not enabled
[2025-10-13 15:13:05] 2025-10-13 13:12:45,517 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 15:13:05] 2025-10-13 13:12:46,218 | INFO     | [monitor] cgroup control has ended
[2025-10-13 15:13:05] 2025-10-13 13:12:47,387 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139761748920128)>', '<ExcThread(monitor, started 139760936916736)>']
[2025-10-13 15:13:05] 2025-10-13 13:12:52,399 | INFO     | all workflow threads have been joined
[2025-10-13 15:13:05] 2025-10-13 13:12:52,399 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 15:13:05] 2025-10-13 13:12:52,400 | INFO     | traces error code: 0
[2025-10-13 15:13:05] 2025-10-13 13:12:52,400 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 15:13:05] 2025-10-13 13:13:05,060 | INFO     | PID=3520657 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 15:13:05] 2025-10-13 13:13:05,060 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 15:13:05] 2025-10-13 13:13:05,060 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 15:13:05] 2025-10-13 13:13:05,060 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 15:13:05] 2025-10-13 13:13:05,060 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 15:13:05] 2025-10-13 13:13:05,060 | INFO     | [monitor] control thread has ended
[2025-10-13 15:13:05] 2025-10-13 13:13:05,108 [wrapper] ==== pilot stdout END ====
[2025-10-13 15:13:05] 2025-10-13 13:13:05,111 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 15:13:05] 2025-10-13 13:13:05,113 [wrapper] pilotpid: 3520657
[2025-10-13 15:13:05] 2025-10-13 13:13:05,116 [wrapper] Pilot exit status: 0
[2025-10-13 15:13:05] 2025-10-13 13:13:05,124 [wrapper] pandaids: 6840852504
[2025-10-13 15:13:05] 2025-10-13 13:13:05,141 [wrapper] cleanup supervisor_pilot 3539104 3520658
[2025-10-13 15:13:05] 2025-10-13 13:13:05,143 [wrapper] Test setup, not cleaning
[2025-10-13 15:13:05] 2025-10-13 13:13:05,146 [wrapper] apfmon messages muted
[2025-10-13 15:13:05] 2025-10-13 13:13:05,148 [wrapper] ==== wrapper stdout END ====
[2025-10-13 15:13:05] 2025-10-13 13:13:05,151 [wrapper] ==== wrapper stderr END ====
[2025-10-13 15:13:05]  *** Error codes and diagnostics ***
[2025-10-13 15:13:05]     "exeErrorCode": 0,
[2025-10-13 15:13:05]     "exeErrorDiag": "",
[2025-10-13 15:13:05]     "pilotErrorCode": 0,
[2025-10-13 15:13:05]     "pilotErrorDiag": "",
[2025-10-13 15:13:05]  *** Listing of results directory ***
[2025-10-13 15:13:05] total 408252
[2025-10-13 15:13:05] -rw-r--r-- 1 boinc boinc    557409 Oct 12 23:57 pilot3.tar.gz
[2025-10-13 15:13:05] -rw-r--r-- 1 boinc boinc      5112 Oct 13 00:41 queuedata.json
[2025-10-13 15:13:05] -rwx------ 1 boinc boinc     36292 Oct 13 00:42 runpilot2-wrapper.sh
[2025-10-13 15:13:05] -rw-r--r-- 1 boinc boinc       100 Oct 13 13:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 15:13:05] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 13:50 run_atlas
[2025-10-13 15:13:05] -rw-r--r-- 1 boinc boinc       105 Oct 13 13:50 job.xml
[2025-10-13 15:13:05] -rw-r--r-- 2 boinc boinc 220979871 Oct 13 13:50 EVNT.46676267._004625.pool.root.1
[2025-10-13 15:13:05] -rw-r--r-- 2 boinc boinc    569685 Oct 13 13:50 input.tar.gz
[2025-10-13 15:13:05] -rw-r--r-- 2 boinc boinc     15120 Oct 13 13:50 start_atlas.sh
[2025-10-13 15:13:05] drwxrwx--x 2 boinc boinc      4096 Oct 13 13:50 shared
[2025-10-13 15:13:05] -rw-r--r-- 1 boinc boinc         0 Oct 13 13:50 boinc_setup_complete
[2025-10-13 15:13:05] -rw-r--r-- 1 boinc boinc      6446 Oct 13 13:50 init_data.xml
[2025-10-13 15:13:05] -rw-r--r-- 1 boinc boinc         0 Oct 13 13:50 boinc_lockfile
[2025-10-13 15:13:05] -rw-r--r-- 1 boinc boinc      2550 Oct 13 13:50 pandaJob.out
[2025-10-13 15:13:05] -rw------- 1 boinc boinc    972497 Oct 13 13:50 agis_schedconf.cvmfs.json
[2025-10-13 15:13:05] -rw------- 1 boinc boinc   1560580 Oct 13 13:50 agis_ddmendpoints.agis.ALL.json
[2025-10-13 15:13:05] drwx------ 5 boinc boinc      4096 Oct 13 13:50 pilot3
[2025-10-13 15:13:05] -rw------- 1 boinc boinc 191251052 Oct 13 15:12 HITS.46676269._091333.pool.root.1
[2025-10-13 15:13:05] -rw-r--r-- 1 boinc boinc       529 Oct 13 15:12 boinc_task_state.xml
[2025-10-13 15:13:05] -rw------- 1 boinc boinc      1019 Oct 13 15:12 memory_monitor_summary.json
[2025-10-13 15:13:05] -rw------- 1 boinc boinc    245650 Oct 13 15:12 log.46676269._091333.job.log.tgz.1
[2025-10-13 15:13:05] -rw------- 1 boinc boinc      7768 Oct 13 15:12 heartbeat.json
[2025-10-13 15:13:05] -rw-r--r-- 1 boinc boinc      8192 Oct 13 15:12 boinc_mmap_file
[2025-10-13 15:13:05] -rw-r--r-- 1 boinc boinc        27 Oct 13 15:12 wrapper_checkpoint.txt
[2025-10-13 15:13:05] -rw------- 1 boinc boinc       747 Oct 13 15:13 pilotlog.txt
[2025-10-13 15:13:05] -rw------- 1 boinc boinc        95 Oct 13 15:13 pilot_heartbeat.json
[2025-10-13 15:13:05] -rw------- 1 boinc boinc    722384 Oct 13 15:13 log.46676269._091333.job.log.1
[2025-10-13 15:13:05] -rw------- 1 boinc boinc       357 Oct 13 15:13 output.list
[2025-10-13 15:13:05] -rw-r--r-- 1 boinc boinc       620 Oct 13 15:13 runtime_log
[2025-10-13 15:13:05] -rw------- 1 boinc boinc    983040 Oct 13 15:13 result.tar.gz
[2025-10-13 15:13:05] -rw-r--r-- 1 boinc boinc      8777 Oct 13 15:13 runtime_log.err
[2025-10-13 15:13:05] -rw------- 1 boinc boinc       658 Oct 13 15:13 1TJNDmiwJS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmQCVMDm43tzGo.diag
[2025-10-13 15:13:05] -rw-r--r-- 1 boinc boinc      8801 Oct 13 15:13 stderr.txt
[2025-10-13 15:13:05] HITS file was successfully produced:
[2025-10-13 15:13:05] -rw------- 1 boinc boinc 191251052 Oct 13 15:12 shared/HITS.pool.root.1
[2025-10-13 15:13:05]  *** Contents of shared directory: ***
[2025-10-13 15:13:05] total 404120
[2025-10-13 15:13:05] -rw-r--r-- 2 boinc boinc 220979871 Oct 13 13:50 ATLAS.root_0
[2025-10-13 15:13:05] -rw-r--r-- 2 boinc boinc    569685 Oct 13 13:50 input.tar.gz
[2025-10-13 15:13:05] -rw-r--r-- 2 boinc boinc     15120 Oct 13 13:50 start_atlas.sh
[2025-10-13 15:13:05] -rw------- 1 boinc boinc 191251052 Oct 13 15:12 HITS.pool.root.1
[2025-10-13 15:13:05] -rw------- 1 boinc boinc    983040 Oct 13 15:13 result.tar.gz
15:13:06 (3516929): run_atlas exited; CPU time 13849.289630
15:13:06 (3516929): called boinc_finish(0)

</stderr_txt>
]]>

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