Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:00:56 (1562275): wrapper (7.7.26015): starting
00:00:56 (1562275): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 00:00:56] Arguments: --nthreads 9
[2025-10-13 00:00:56] Threads: 9
[2025-10-13 00:00:56] Checking for CVMFS
[2025-10-13 00:00:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:00:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:00:58] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:01:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:01:00] 2.13.2.0 128645 110085 442668 151647 0 508 32350455 39288832 16203 16776704 0 123263296 99.501 168492642 32083 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 00:01:00] CVMFS is ok
[2025-10-13 00:01:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:01:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:01:00] Further information can be found at the LHC@home message board.
[2025-10-13 00:01:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:01:00] Checking for apptainer binary...
[2025-10-13 00:01:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:01:00] Running /usr/bin/apptainer --version
[2025-10-13 00:01:00] apptainer version 1.4.3-1.el9
[2025-10-13 00:01:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:01:01] c-211-27.aglt2.org
[2025-10-13 00:01:01] apptainer works
[2025-10-13 00:01:02] Set ATHENA_PROC_NUMBER=9
[2025-10-13 00:01:02] Set ATHENA_CORE_NUMBER=9
[2025-10-13 00:01:02] Starting ATLAS job with PandaID=6840851984
[2025-10-13 00:01:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 17:28:43]  *** The last 200 lines of the pilot log: ***
[2025-10-13 17:28:43] 2025-10-13 21:28:08,621 | INFO     | chi2: 4.506979049873913
[2025-10-13 17:28:43] 2025-10-13 21:28:08,621 | INFO     | current chi2=4.506979049873913 (change=47.41334135041157 %)
[2025-10-13 17:28:43] 2025-10-13 21:28:08,622 | INFO     | sum of square deviations: 322335710271.50305
[2025-10-13 17:28:43] 2025-10-13 21:28:08,653 | INFO     | sum of deviations: 1038457131458.6708
[2025-10-13 17:28:43] 2025-10-13 21:28:08,653 | INFO     | mean x: 1760359961.6594274
[2025-10-13 17:28:43] 2025-10-13 21:28:08,653 | INFO     | mean y: 2541567.5004935833
[2025-10-13 17:28:43] 2025-10-13 21:28:08,654 | INFO     | -- intersect: -5668745534.321928
[2025-10-13 17:28:43] 2025-10-13 21:28:08,654 | INFO     | intersect: -5668745534.321928
[2025-10-13 17:28:43] 2025-10-13 21:28:08,655 | INFO     | chi2: 2.1690393740617107
[2025-10-13 17:28:43] 2025-10-13 21:28:08,655 | INFO     | current chi2=2.1690393740617107 (change=51.87376399891649 %)
[2025-10-13 17:28:43] 2025-10-13 21:28:08,657 | INFO     | sum of square deviations: 317585873831.33246
[2025-10-13 17:28:43] 2025-10-13 21:28:08,688 | INFO     | sum of deviations: 858820502615.6548
[2025-10-13 17:28:43] 2025-10-13 21:28:08,688 | INFO     | mean x: 1760360114.1656747
[2025-10-13 17:28:43] 2025-10-13 21:28:08,689 | INFO     | mean y: 2547331.4871031744
[2025-10-13 17:28:43] 2025-10-13 21:28:08,689 | INFO     | -- intersect: -4757844998.92001
[2025-10-13 17:28:43] 2025-10-13 21:28:08,689 | INFO     | intersect: -4757844998.92001
[2025-10-13 17:28:43] 2025-10-13 21:28:08,690 | INFO     | chi2: 1.129623934703771
[2025-10-13 17:28:43] 2025-10-13 21:28:08,691 | INFO     | current chi2=1.129623934703771 (change=47.920542696813555 %)
[2025-10-13 17:28:43] 2025-10-13 21:28:08,692 | INFO     | sum of square deviations: 312882984089.42505
[2025-10-13 17:28:43] 2025-10-13 21:28:08,724 | INFO     | sum of deviations: 744614540281.3068
[2025-10-13 17:28:43] 2025-10-13 21:28:08,724 | INFO     | mean x: 1760360266.6709871
[2025-10-13 17:28:43] 2025-10-13 21:28:08,724 | INFO     | mean y: 2551034.4675972085
[2025-10-13 17:28:43] 2025-10-13 21:28:08,725 | INFO     | -- intersect: -4186842180.735372
[2025-10-13 17:28:43] 2025-10-13 21:28:08,725 | INFO     | intersect: -4186842180.735372
[2025-10-13 17:28:43] 2025-10-13 21:28:08,726 | INFO     | chi2: 0.757306341780903
[2025-10-13 17:28:43] 2025-10-13 21:28:08,726 | INFO     | current chi2=0.757306341780903 (change=32.95942848630447 %)
[2025-10-13 17:28:43] 2025-10-13 21:28:08,728 | INFO     | sum of square deviations: 308226684957.6078
[2025-10-13 17:28:43] 2025-10-13 21:28:08,757 | INFO     | sum of deviations: 657117213870.5953
[2025-10-13 17:28:43] 2025-10-13 21:28:08,758 | INFO     | mean x: 1760360419.1773548
[2025-10-13 17:28:43] 2025-10-13 21:28:08,758 | INFO     | mean y: 2553899.725450902
[2025-10-13 17:28:43] 2025-10-13 21:28:08,758 | INFO     | -- intersect: -3750408418.306789
[2025-10-13 17:28:43] 2025-10-13 21:28:08,758 | INFO     | intersect: -3750408418.306789
[2025-10-13 17:28:43] 2025-10-13 21:28:08,760 | INFO     | chi2: 0.546598626823581
[2025-10-13 17:28:43] 2025-10-13 21:28:08,760 | INFO     | current chi2=0.546598626823581 (change=27.8233131472022 %)
[2025-10-13 17:28:43] 2025-10-13 21:28:08,761 | INFO     | sum of square deviations: 303616987329.80316
[2025-10-13 17:28:43] 2025-10-13 21:28:08,814 | INFO     | sum of deviations: 598678083086.2388
[2025-10-13 17:28:43] 2025-10-13 21:28:08,814 | INFO     | mean x: 1760360571.6807654
[2025-10-13 17:28:43] 2025-10-13 21:28:08,814 | INFO     | mean y: 2555832.0543806646
[2025-10-13 17:28:43] 2025-10-13 21:28:08,814 | INFO     | -- intersect: -3468558554.077287
[2025-10-13 17:28:43] 2025-10-13 21:28:08,815 | INFO     | intersect: -3468558554.077287
[2025-10-13 17:28:43] 2025-10-13 21:28:08,816 | INFO     | chi2: 0.45597679370910277
[2025-10-13 17:28:43] 2025-10-13 21:28:08,817 | INFO     | current chi2=0.45597679370910277 (change=16.579228096693903 %)
[2025-10-13 17:28:43] 2025-10-13 21:28:08,817 | INFO     | left removable region: 60
[2025-10-13 17:28:43] 2025-10-13 21:28:08,818 | INFO     | sum of square deviations: 271778831838.3281
[2025-10-13 17:28:43] 2025-10-13 21:28:08,851 | INFO     | sum of deviations: 300913271795.88513
[2025-10-13 17:28:43] 2025-10-13 21:28:08,851 | INFO     | mean x: 1760361303.6854753
[2025-10-13 17:28:43] 2025-10-13 21:28:08,851 | INFO     | mean y: 2565529.747126437
[2025-10-13 17:28:43] 2025-10-13 21:28:08,852 | INFO     | -- intersect: -1946504881.1153944
[2025-10-13 17:28:43] 2025-10-13 21:28:08,852 | INFO     | intersect: -1946504881.1153944
[2025-10-13 17:28:43] 2025-10-13 21:28:08,853 | INFO     | chi2: 0.08403451493802161
[2025-10-13 17:28:43] 2025-10-13 21:28:08,853 | INFO     | -- intersect: -1946504881.1153944
[2025-10-13 17:28:43] 2025-10-13 21:28:08,854 | INFO     | current memory leak: 1.11 B/s (using 957 data points, chi2=0.08)
[2025-10-13 17:28:43] 2025-10-13 21:28:08,855 | INFO     | could have reported an average CPU frequency of 2899 MHz (37 samples)
[2025-10-13 17:28:43] 2025-10-13 21:28:08,855 | INFO     | ..............................
[2025-10-13 17:28:43] 2025-10-13 21:28:08,855 | INFO     | . Timing measurements:
[2025-10-13 17:28:43] 2025-10-13 21:28:08,855 | INFO     | . get job = 2 s
[2025-10-13 17:28:43] 2025-10-13 21:28:08,856 | INFO     | . initial setup = 9 s
[2025-10-13 17:28:43] 2025-10-13 21:28:08,856 | INFO     | . payload setup = 79 s
[2025-10-13 17:28:43] 2025-10-13 21:28:08,856 | INFO     | . stage-in = 0 s
[2025-10-13 17:28:43] 2025-10-13 21:28:08,856 | INFO     | . payload execution = 62453 s
[2025-10-13 17:28:43] 2025-10-13 21:28:08,856 | INFO     | . stage-out = 2 s
[2025-10-13 17:28:43] 2025-10-13 21:28:08,856 | INFO     | . log creation = 0 s
[2025-10-13 17:28:43] 2025-10-13 21:28:08,856 | INFO     | ..............................
[2025-10-13 17:28:43] 2025-10-13 21:28:09,330 | INFO     | 
[2025-10-13 17:28:43] 2025-10-13 21:28:09,330 | INFO     | job summary report
[2025-10-13 17:28:43] 2025-10-13 21:28:09,330 | INFO     | --------------------------------------------------
[2025-10-13 17:28:43] 2025-10-13 21:28:09,330 | INFO     | PanDA job id: 6840851984
[2025-10-13 17:28:43] 2025-10-13 21:28:09,330 | INFO     | task id: 46676269
[2025-10-13 17:28:43] 2025-10-13 21:28:09,331 | INFO     | errors: (none)
[2025-10-13 17:28:43] 2025-10-13 21:28:09,331 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 17:28:43] 2025-10-13 21:28:09,331 | INFO     | pilot state: finished 
[2025-10-13 17:28:43] 2025-10-13 21:28:09,331 | INFO     | transexitcode: 0
[2025-10-13 17:28:43] 2025-10-13 21:28:09,331 | INFO     | exeerrorcode: 0
[2025-10-13 17:28:43] 2025-10-13 21:28:09,331 | INFO     | exeerrordiag: 
[2025-10-13 17:28:43] 2025-10-13 21:28:09,331 | INFO     | exitcode: 0
[2025-10-13 17:28:43] 2025-10-13 21:28:09,331 | INFO     | exitmsg: OK
[2025-10-13 17:28:43] 2025-10-13 21:28:09,332 | INFO     | cpuconsumptiontime: 80940 s
[2025-10-13 17:28:43] 2025-10-13 21:28:09,332 | INFO     | nevents: 400
[2025-10-13 17:28:43] 2025-10-13 21:28:09,332 | INFO     | neventsw: 0
[2025-10-13 17:28:43] 2025-10-13 21:28:09,332 | INFO     | pid: 1629237
[2025-10-13 17:28:43] 2025-10-13 21:28:09,332 | INFO     | pgrp: 1629237
[2025-10-13 17:28:43] 2025-10-13 21:28:09,332 | INFO     | corecount: 9
[2025-10-13 17:28:43] 2025-10-13 21:28:09,332 | INFO     | event service: False
[2025-10-13 17:28:43] 2025-10-13 21:28:09,333 | INFO     | sizes: {0: 2348029, 1: 2348630, 2: 2348714, 5: 2348969, 7: 2348997, 19: 2348997, 32: 2349153, 45: 2349181, 57: 2349209, 65: 2349499, 69: 2349527, 62537: 2400819, 6
[2025-10-13 17:28:43] 2025-10-13 21:28:09,333 | INFO     | --------------------------------------------------
[2025-10-13 17:28:43] 2025-10-13 21:28:09,333 | INFO     | 
[2025-10-13 17:28:43] 2025-10-13 21:28:09,333 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 17:28:43] 2025-10-13 21:28:09,400 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 17:28:43] 2025-10-13 21:28:09,400 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 17:28:43] 2025-10-13 21:28:09,401 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 17:28:43] 2025-10-13 21:28:09,401 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 17:28:43] 2025-10-13 21:28:09,401 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 17:28:43] 2025-10-13 21:28:09,401 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 17:28:43] 2025-10-13 21:28:09,401 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 17:28:43] 2025-10-13 21:28:09,401 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 17:28:43] 2025-10-13 21:28:09,402 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 17:28:43] 2025-10-13 21:28:09,402 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 17:28:43] 2025-10-13 21:28:09,402 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 17:28:43] 2025-10-13 21:28:09,402 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 17:28:43] 2025-10-13 21:28:09,402 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 17:28:43] 2025-10-13 21:28:09,402 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 17:28:43] 2025-10-13 21:28:09,403 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 17:28:43] 2025-10-13 21:28:09,403 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 17:28:43] 2025-10-13 21:28:09,403 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 17:28:43] 2025-10-13 21:28:09,403 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 17:28:43] 2025-10-13 21:28:09,403 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 17:28:43] 2025-10-13 21:28:09,403 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 17:28:43] 2025-10-13 21:28:09,404 | INFO     | job 6840851984 has completed (purged errors)
[2025-10-13 17:28:43] 2025-10-13 21:28:09,404 | INFO     | overall cleanup function is called
[2025-10-13 17:28:43] 2025-10-13 21:28:09,544 | INFO     | PID=1586588 has CPU usage=15.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 17:28:43] 2025-10-13 21:28:09,544 | INFO     | .. there are 24 such processes running
[2025-10-13 17:28:43] 2025-10-13 21:28:10,418 | INFO     | --- collectZombieJob: --- 10, [1629237]
[2025-10-13 17:28:43] 2025-10-13 21:28:10,418 | INFO     | zombie collector waiting for pid 1629237
[2025-10-13 17:28:43] 2025-10-13 21:28:10,418 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 17:28:43] 2025-10-13 21:28:10,418 | INFO     | collected zombie processes
[2025-10-13 17:28:43] 2025-10-13 21:28:10,418 | INFO     | will attempt to kill all subprocesses of pid=1629237
[2025-10-13 17:28:43] 2025-10-13 21:28:10,826 | INFO     | process IDs to be killed: [1629237] (in reverse order)
[2025-10-13 17:28:43] 2025-10-13 21:28:10,944 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 17:28:43] 2025-10-13 21:28:10,944 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 17:28:43] 2025-10-13 21:28:10,961 | INFO     | did not find any defunct processes belonging to 1629237
[2025-10-13 17:28:43] 2025-10-13 21:28:10,977 | INFO     | did not find any defunct processes belonging to 1629237
[2025-10-13 17:28:43] 2025-10-13 21:28:10,977 | INFO     | ready for new job
[2025-10-13 17:28:43] 2025-10-13 21:28:10,977 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 17:28:43] 2025-10-13 21:28:10,983 | INFO     | ***************************************
[2025-10-13 17:28:43] 2025-10-13 21:28:10,983 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 17:28:43] 2025-10-13 21:28:10,983 | INFO     | ***************************************
[2025-10-13 17:28:43] 2025-10-13 21:28:10,983 | INFO     | 
[2025-10-13 17:28:43] 2025-10-13 21:28:10,985 | INFO     | architecture information:
[2025-10-13 17:28:43] 2025-10-13 21:28:10,986 | INFO     | executing command: cat /etc/os-release
[2025-10-13 17:28:43] 2025-10-13 21:28:11,004 | INFO     | cat /etc/os-release:
[2025-10-13 17:28:43] NAME="CentOS Linux"
[2025-10-13 17:28:43] VERSION="7 (Core)"
[2025-10-13 17:28:43] ID="centos"
[2025-10-13 17:28:43] ID_LIKE="rhel fedora"
[2025-10-13 17:28:43] VERSION_ID="7"
[2025-10-13 17:28:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 17:28:43] ANSI_COLOR="0;31"
[2025-10-13 17:28:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 17:28:43] HOME_URL="https://www.centos.org/"
[2025-10-13 17:28:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 17:28:43] 
[2025-10-13 17:28:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 17:28:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 17:28:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 17:28:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 17:28:43] 
[2025-10-13 17:28:43] 2025-10-13 21:28:11,004 | INFO     | ***************************************
[2025-10-13 17:28:43] 2025-10-13 21:28:11,508 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 17:28:43] 2025-10-13 21:28:11,540 | INFO     | sufficient remaining disk space (53619982336 B)
[2025-10-13 17:28:43] 2025-10-13 21:28:11,540 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 17:28:43] 2025-10-13 21:28:11,541 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 17:28:43] 2025-10-13 21:28:11,541 | INFO     | update_server=False
[2025-10-13 17:28:43] 2025-10-13 21:28:11,541 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 17:28:43] 2025-10-13 21:28:11,541 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 17:28:43] 2025-10-13 21:28:11,542 | INFO     | aborting loop
[2025-10-13 17:28:43] 2025-10-13 21:28:11,623 | INFO     | all job control threads have been joined
[2025-10-13 17:28:43] 2025-10-13 21:28:11,705 | INFO     | all payload control threads have been joined
[2025-10-13 17:28:43] 2025-10-13 21:28:12,000 | INFO     | all data control threads have been joined
[2025-10-13 17:28:43] 2025-10-13 21:28:12,547 | INFO     | [job] retrieve thread has finished
[2025-10-13 17:28:43] 2025-10-13 21:28:12,565 | INFO     | [job] job monitor thread has finished
[2025-10-13 17:28:43] 2025-10-13 21:28:12,629 | INFO     | [job] control thread has finished
[2025-10-13 17:28:43] 2025-10-13 21:28:12,712 | INFO     | [payload] control thread has finished
[2025-10-13 17:28:43] 2025-10-13 21:28:12,729 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 17:28:43] 2025-10-13 21:28:13,006 | INFO     | [data] control thread has finished
[2025-10-13 17:28:43] 2025-10-13 21:28:13,042 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 17:28:43] 2025-10-13 21:28:13,156 | INFO     | [job] validate thread has finished
[2025-10-13 17:28:43] 2025-10-13 21:28:13,164 | INFO     | [payload] validate_post thread has finished
[2025-10-13 17:28:43] 2025-10-13 21:28:13,183 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 17:28:43] 2025-10-13 21:28:13,230 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 17:28:43] 2025-10-13 21:28:13,263 | INFO     | [data] copytool_in thread has finished
[2025-10-13 17:28:43] 2025-10-13 21:28:13,310 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 17:28:43] 2025-10-13 21:28:13,345 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 17:28:43] 2025-10-13 21:28:13,988 | INFO     | [payload] failed_post thread has finished
[2025-10-13 17:28:43] 2025-10-13 21:28:14,145 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 17:28:43] 2025-10-13 21:28:14,738 | INFO     | [data] copytool_out thread has finished
[2025-10-13 17:28:43] 2025-10-13 21:28:15,151 | INFO     | [job] queue monitor thread has finished
[2025-10-13 17:28:43] 2025-10-13 21:28:17,195 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 17:28:43] 2025-10-13 21:28:37,210 | INFO     | [monitor] cgroup control has ended
[2025-10-13 17:28:43] 2025-10-13 21:28:38,095 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140236768438080)>', '<ExcThread(monitor, started 140236411610880)>']
[2025-10-13 17:28:43] 2025-10-13 21:28:42,222 | INFO     | PID=1586588 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 17:28:43] 2025-10-13 21:28:42,223 | INFO     | .. there are 24 such processes running
[2025-10-13 17:28:43] 2025-10-13 21:28:42,224 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 17:28:43] 2025-10-13 21:28:42,224 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 17:28:43] 2025-10-13 21:28:42,224 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 17:28:43] 2025-10-13 21:28:42,224 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 17:28:43] 2025-10-13 21:28:42,224 | INFO     | [monitor] control thread has ended
[2025-10-13 17:28:43] 2025-10-13 21:28:43,124 | INFO     | all workflow threads have been joined
[2025-10-13 17:28:43] 2025-10-13 21:28:43,129 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 17:28:43] 2025-10-13 21:28:43,129 | INFO     | traces error code: 0
[2025-10-13 17:28:43] 2025-10-13 21:28:43,129 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 17:28:43] 2025-10-13 21:28:43,383 [wrapper] ==== pilot stdout END ====
[2025-10-13 17:28:43] 2025-10-13 21:28:43,417 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 17:28:43] 2025-10-13 21:28:43,420 [wrapper] pilotpid: 1586588
[2025-10-13 17:28:43] 2025-10-13 21:28:43,424 [wrapper] Pilot exit status: 0
[2025-10-13 17:28:43] 2025-10-13 21:28:43,542 [wrapper] pandaids: 6840851984
[2025-10-13 17:28:43] 2025-10-13 21:28:43,665 [wrapper] cleanup supervisor_pilot 2120851 1586589
[2025-10-13 17:28:43] 2025-10-13 21:28:43,669 [wrapper] Test setup, not cleaning
[2025-10-13 17:28:43] 2025-10-13 21:28:43,673 [wrapper] apfmon messages muted
[2025-10-13 17:28:43] 2025-10-13 21:28:43,677 [wrapper] ==== wrapper stdout END ====
[2025-10-13 17:28:43] 2025-10-13 21:28:43,681 [wrapper] ==== wrapper stderr END ====
[2025-10-13 17:28:43]  *** Error codes and diagnostics ***
[2025-10-13 17:28:43]     "exeErrorCode": 0,
[2025-10-13 17:28:43]     "exeErrorDiag": "",
[2025-10-13 17:28:43]     "pilotErrorCode": 0,
[2025-10-13 17:28:43]     "pilotErrorDiag": "",
[2025-10-13 17:28:43]  *** Listing of results directory ***
[2025-10-13 17:28:43] total 419304
[2025-10-13 17:28:43] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 17:57 pilot3.tar.gz
[2025-10-13 17:28:43] -rwx------. 1 boincer umatlas     36292 Oct 12 18:32 runpilot2-wrapper.sh
[2025-10-13 17:28:43] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 18:33 queuedata.json
[2025-10-13 17:28:43] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 17:28:43] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:00 run_atlas
[2025-10-13 17:28:43] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:00 job.xml
[2025-10-13 17:28:43] -rw-r--r--. 2 boincer umatlas 220459493 Oct 13 00:00 EVNT.46676267._004618.pool.root.1
[2025-10-13 17:28:43] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:00 start_atlas.sh
[2025-10-13 17:28:43] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:00 shared
[2025-10-13 17:28:43] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 00:00 input.tar.gz
[2025-10-13 17:28:43] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:00 boinc_lockfile
[2025-10-13 17:28:43] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:01 pandaJob.out
[2025-10-13 17:28:43] -rw-------. 1 boincer umatlas    974373 Oct 13 00:03 agis_schedconf.cvmfs.json
[2025-10-13 17:28:43] drwx------. 5 boincer umatlas      4096 Oct 13 00:03 pilot3
[2025-10-13 17:28:43] -rw-r--r--. 1 boincer umatlas      6525 Oct 13 17:21 init_data.xml
[2025-10-13 17:28:43] -rw-------. 1 boincer umatlas 189684439 Oct 13 17:27 HITS.46676269._091163.pool.root.1
[2025-10-13 17:28:43] -rw-r--r--. 1 boincer umatlas       531 Oct 13 17:27 boinc_task_state.xml
[2025-10-13 17:28:43] -rw-------. 1 boincer umatlas      1040 Oct 13 17:27 memory_monitor_summary.json
[2025-10-13 17:28:43] -rw-------. 1 boincer umatlas   1560580 Oct 13 17:27 agis_ddmendpoints.agis.ALL.json
[2025-10-13 17:28:43] -rw-------. 1 boincer umatlas   1008495 Oct 13 17:27 log.46676269._091163.job.log.tgz.1
[2025-10-13 17:28:43] -rw-------. 1 boincer umatlas      7822 Oct 13 17:28 heartbeat.json
[2025-10-13 17:28:43] -rw-------. 1 boincer umatlas        95 Oct 13 17:28 pilot_heartbeat.json
[2025-10-13 17:28:43] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 17:28 boinc_mmap_file
[2025-10-13 17:28:43] -rw-r--r--. 1 boincer umatlas        28 Oct 13 17:28 wrapper_checkpoint.txt
[2025-10-13 17:28:43] -rw-------. 1 boincer umatlas      4824 Oct 13 17:28 pilotlog.txt
[2025-10-13 17:28:43] -rw-------. 1 boincer umatlas   6654027 Oct 13 17:28 log.46676269._091163.job.log.1
[2025-10-13 17:28:43] -rw-------. 1 boincer umatlas       357 Oct 13 17:28 output.list
[2025-10-13 17:28:43] -rw-r--r--. 1 boincer umatlas       620 Oct 13 17:28 runtime_log
[2025-10-13 17:28:43] -rw-------. 1 boincer umatlas   7680000 Oct 13 17:28 result.tar.gz
[2025-10-13 17:28:43] -rw-r--r--. 1 boincer umatlas      8704 Oct 13 17:28 runtime_log.err
[2025-10-13 17:28:43] -rw-------. 1 boincer umatlas       660 Oct 13 17:28 JOENDmlnJS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmOBVMDmWrdIvm.diag
[2025-10-13 17:28:43] -rw-r--r--. 1 boincer umatlas     21202 Oct 13 17:28 stderr.txt
[2025-10-13 17:28:43] HITS file was successfully produced:
[2025-10-13 17:28:43] -rw-------. 1 boincer umatlas 189684439 Oct 13 17:27 shared/HITS.pool.root.1
[2025-10-13 17:28:43]  *** Contents of shared directory: ***
[2025-10-13 17:28:43] total 408616
[2025-10-13 17:28:43] -rw-r--r--. 2 boincer umatlas 220459493 Oct 13 00:00 ATLAS.root_0
[2025-10-13 17:28:43] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:00 start_atlas.sh
[2025-10-13 17:28:43] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 00:00 input.tar.gz
[2025-10-13 17:28:43] -rw-------. 1 boincer umatlas 189684439 Oct 13 17:27 HITS.pool.root.1
[2025-10-13 17:28:43] -rw-------. 1 boincer umatlas   7680000 Oct 13 17:28 result.tar.gz
17:28:45 (1562275): run_atlas exited; CPU time 83543.706303
17:28:45 (1562275): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN