Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:28:33 (844529): wrapper (7.7.26015): starting
23:28:33 (844529): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 23:28:33] Arguments: --nthreads 12
[2025-10-12 23:28:33] Threads: 12
[2025-10-12 23:28:33] Checking for CVMFS
[2025-10-12 23:28:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 23:28:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 23:28:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 23:28:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 23:28:34] 2.13.2.0 3683012 13687 147292 151647 0 188 38138720 40960000 5645 16776704 0 158351159 99.871 55103789 32596 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 23:28:34] CVMFS is ok
[2025-10-12 23:28:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 23:28:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 23:28:34] Further information can be found at the LHC@home message board.
[2025-10-12 23:28:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 23:28:34] Checking for apptainer binary...
[2025-10-12 23:28:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 23:28:34] Running /usr/bin/apptainer --version
[2025-10-12 23:28:34] apptainer version 1.4.3-1.el9
[2025-10-12 23:28:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 23:28:34] c8-7-4.aglt2.org
[2025-10-12 23:28:34] apptainer works
[2025-10-12 23:28:34] Set ATHENA_PROC_NUMBER=12
[2025-10-12 23:28:34] Set ATHENA_CORE_NUMBER=12
[2025-10-12 23:28:34] Starting ATLAS job with PandaID=6840852523
[2025-10-12 23:28:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:55:54]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:55:54]  scope=mc23_13p6TeV
[2025-10-12 23:55:54]  status=None
[2025-10-12 23:55:54]  status_code=0
[2025-10-12 23:55:54]  storage_token=
[2025-10-12 23:55:54]  surl=/tmp/boinchome/slots/8/PanDA_Pilot-6840852523/log.46676269._091352.job.log.tgz.1
[2025-10-12 23:55:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4f/c2/log.46676269._091352.job.log.tgz.1
[2025-10-12 23:55:54]  workdir=None
[2025-10-12 23:55:54] ]
[2025-10-12 23:55:54] 2025-10-13 03:55:15,455 | INFO     | transferring file log.46676269._091352.job.log.tgz.1 from /tmp/boinchome/slots/8/PanDA_Pilot-6840852523/log.46676269._091352.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 23:55:54] 2025-10-13 03:55:15,455 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/8/PanDA_Pilot-6840852523/log.46676269._091352.job.log.tgz.1 /tmp/boinchome/slots/8/log.46676269._091352.job
[2025-10-12 23:55:54] 2025-10-13 03:55:15,471 | INFO     | adding to output.list: log.46676269._091352.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4f/c2/log.46676269._091352.job.log.tg
[2025-10-12 23:55:54] 2025-10-13 03:55:15,472 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 23:55:54] 2025-10-13 03:55:15,472 | INFO     | summary of transferred files:
[2025-10-12 23:55:54] 2025-10-13 03:55:15,472 | INFO     |  -- lfn=log.46676269._091352.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 23:55:54] 2025-10-13 03:55:15,472 | INFO     | stage-out finished correctly
[2025-10-12 23:55:54] 2025-10-13 03:55:16,389 | INFO     | time since job start (1594s) is within the limit (172800.0s)
[2025-10-12 23:55:54] 2025-10-13 03:55:16,390 | INFO     | 1596s have passed since pilot start - server update state is 'RUNNING'
[2025-10-12 23:55:54] 2025-10-13 03:55:17,824 | INFO     | PID=848988 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 23:55:54] 2025-10-13 03:55:17,824 | INFO     | .. there are 8 such processes running
[2025-10-12 23:55:54] 2025-10-13 03:55:18,354 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 23:55:54] 2025-10-13 03:55:18,653 | INFO     | job 6840852523 has state=finished
[2025-10-12 23:55:54] 2025-10-13 03:55:18,653 | INFO     | preparing for final server update for job 6840852523 in state='finished'
[2025-10-12 23:55:54] 2025-10-13 03:55:18,654 | INFO     | this job has now completed (state=finished)
[2025-10-12 23:55:54] 2025-10-13 03:55:18,654 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 23:55:54] 2025-10-13 03:55:18,654 | INFO     | log transfer has been attempted: DONE
[2025-10-12 23:55:54] 2025-10-13 03:55:18,654 | INFO     | job 6840852523 has finished - writing final server update
[2025-10-12 23:55:54] 2025-10-13 03:55:18,654 | INFO     | total number of processed events: 400 (read)
[2025-10-12 23:55:54] 2025-10-13 03:55:18,655 | INFO     | executing command: lscpu
[2025-10-12 23:55:54] 2025-10-13 03:55:18,718 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 23:55:54] 2025-10-13 03:55:18,824 | INFO     | time since job start (1596s) is within the limit (172800.0s)
[2025-10-12 23:55:54] 2025-10-13 03:55:20,438 | WARNING  | process 859696 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 23:55:54] 2025-10-13 03:55:20,439 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6840852523/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 23:55:54] 2025-10-13 03:55:20,783 | INFO     | number of running child processes to parent process 859696: 1
[2025-10-12 23:55:54] 2025-10-13 03:55:20,783 | INFO     | maximum number of monitored processes: 6
[2025-10-12 23:55:54] 2025-10-13 03:55:20,829 | INFO     | time since job start (1598s) is within the limit (172800.0s)
[2025-10-12 23:55:54] 2025-10-13 03:55:22,276 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 23:55:54] 2025-10-13 03:55:22,281 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3563.842203124992
[2025-10-12 23:55:54] 2025-10-13 03:55:22,294 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6840852523/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 23:55:54] 2025-10-13 03:55:22,294 | INFO     | extracted standard info from prmon json
[2025-10-12 23:55:54] 2025-10-13 03:55:22,294 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 23:55:54] 2025-10-13 03:55:22,294 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 23:55:54] 2025-10-13 03:55:22,295 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 23:55:54] 2025-10-13 03:55:22,295 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:55:54] 2025-10-13 03:55:22,295 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:55:54] 2025-10-13 03:55:22,295 | INFO     | sum of square deviations: 2120970.0
[2025-10-12 23:55:54] 2025-10-13 03:55:22,296 | INFO     | sum of deviations: 76595260.0
[2025-10-12 23:55:54] 2025-10-13 03:55:22,296 | INFO     | mean x: 1760326997.0
[2025-10-12 23:55:54] 2025-10-13 03:55:22,296 | INFO     | mean y: 2442910.0
[2025-10-12 23:55:54] 2025-10-13 03:55:22,296 | INFO     | -- intersect: -63568802331.67443
[2025-10-12 23:55:54] 2025-10-13 03:55:22,296 | INFO     | intersect: -63568802331.67443
[2025-10-12 23:55:54] 2025-10-13 03:55:22,296 | INFO     | chi2: 0.0005060452398387061
[2025-10-12 23:55:54] 2025-10-13 03:55:22,296 | INFO     | -- intersect: -63568802331.67443
[2025-10-12 23:55:54] 2025-10-13 03:55:22,296 | INFO     | current memory leak: 36.11 B/s (using 19 data points, chi2=0.00)
[2025-10-12 23:55:54] 2025-10-13 03:55:22,296 | INFO     | could have reported an average CPU frequency of 3540 MHz (4 samples)
[2025-10-12 23:55:54] 2025-10-13 03:55:22,297 | INFO     | ..............................
[2025-10-12 23:55:54] 2025-10-13 03:55:22,297 | INFO     | . Timing measurements:
[2025-10-12 23:55:54] 2025-10-13 03:55:22,297 | INFO     | . get job = 0 s
[2025-10-12 23:55:54] 2025-10-13 03:55:22,297 | INFO     | . initial setup = 2 s
[2025-10-12 23:55:54] 2025-10-13 03:55:22,297 | INFO     | . payload setup = 3 s
[2025-10-12 23:55:54] 2025-10-13 03:55:22,297 | INFO     | . stage-in = 0 s
[2025-10-12 23:55:54] 2025-10-13 03:55:22,297 | INFO     | . payload execution = 1571 s
[2025-10-12 23:55:54] 2025-10-13 03:55:22,297 | INFO     | . stage-out = 0 s
[2025-10-12 23:55:54] 2025-10-13 03:55:22,297 | INFO     | . log creation = 0 s
[2025-10-12 23:55:54] 2025-10-13 03:55:22,297 | INFO     | ..............................
[2025-10-12 23:55:54] 2025-10-13 03:55:22,545 | INFO     | 
[2025-10-12 23:55:54] 2025-10-13 03:55:22,545 | INFO     | job summary report
[2025-10-12 23:55:54] 2025-10-13 03:55:22,545 | INFO     | --------------------------------------------------
[2025-10-12 23:55:54] 2025-10-13 03:55:22,545 | INFO     | PanDA job id: 6840852523
[2025-10-12 23:55:54] 2025-10-13 03:55:22,545 | INFO     | task id: 46676269
[2025-10-12 23:55:54] 2025-10-13 03:55:22,545 | INFO     | errors: (none)
[2025-10-12 23:55:54] 2025-10-13 03:55:22,545 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:55:54] 2025-10-13 03:55:22,545 | INFO     | pilot state: finished 
[2025-10-12 23:55:54] 2025-10-13 03:55:22,545 | INFO     | transexitcode: 0
[2025-10-12 23:55:54] 2025-10-13 03:55:22,545 | INFO     | exeerrorcode: 0
[2025-10-12 23:55:54] 2025-10-13 03:55:22,545 | INFO     | exeerrordiag: 
[2025-10-12 23:55:54] 2025-10-13 03:55:22,546 | INFO     | exitcode: 0
[2025-10-12 23:55:54] 2025-10-13 03:55:22,546 | INFO     | exitmsg: OK
[2025-10-12 23:55:54] 2025-10-13 03:55:22,546 | INFO     | cpuconsumptiontime: 16650 s
[2025-10-12 23:55:54] 2025-10-13 03:55:22,546 | INFO     | nevents: 400
[2025-10-12 23:55:54] 2025-10-13 03:55:22,546 | INFO     | neventsw: 0
[2025-10-12 23:55:54] 2025-10-13 03:55:22,546 | INFO     | pid: 859696
[2025-10-12 23:55:54] 2025-10-13 03:55:22,546 | INFO     | pgrp: 859696
[2025-10-12 23:55:54] 2025-10-13 03:55:22,546 | INFO     | corecount: 12
[2025-10-12 23:55:54] 2025-10-13 03:55:22,546 | INFO     | event service: False
[2025-10-12 23:55:54] 2025-10-13 03:55:22,546 | INFO     | sizes: {0: 2348686, 1: 2348885, 3: 2349147, 11: 2349175, 1579: 2374014, 1580: 2383012, 1582: 2383196, 1586: 2383390}
[2025-10-12 23:55:54] 2025-10-13 03:55:22,546 | INFO     | --------------------------------------------------
[2025-10-12 23:55:54] 2025-10-13 03:55:22,546 | INFO     | 
[2025-10-12 23:55:54] 2025-10-13 03:55:22,546 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-10-12 23:55:54] 2025-10-13 03:55:22,560 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:55:54] 2025-10-13 03:55:22,560 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:55:54] 2025-10-13 03:55:22,561 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:55:54] 2025-10-13 03:55:22,561 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:55:54] 2025-10-13 03:55:22,561 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:55:54] 2025-10-13 03:55:22,561 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:55:54] 2025-10-13 03:55:22,561 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:55:54] 2025-10-13 03:55:22,561 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:55:54] 2025-10-13 03:55:22,561 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:55:54] 2025-10-13 03:55:22,561 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:55:54] 2025-10-13 03:55:22,561 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:55:54] 2025-10-13 03:55:22,561 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:55:54] 2025-10-13 03:55:22,561 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:55:54] 2025-10-13 03:55:22,561 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:55:54] 2025-10-13 03:55:22,561 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:55:54] 2025-10-13 03:55:22,561 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:55:54] 2025-10-13 03:55:22,561 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:55:54] 2025-10-13 03:55:22,561 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:55:54] 2025-10-13 03:55:22,561 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:55:54] 2025-10-13 03:55:22,561 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:55:54] 2025-10-13 03:55:22,561 | INFO     | job 6840852523 has completed (purged errors)
[2025-10-12 23:55:54] 2025-10-13 03:55:22,561 | INFO     | overall cleanup function is called
[2025-10-12 23:55:54] 2025-10-13 03:55:23,569 | INFO     | --- collectZombieJob: --- 10, [859696]
[2025-10-12 23:55:54] 2025-10-13 03:55:23,569 | INFO     | zombie collector waiting for pid 859696
[2025-10-12 23:55:54] 2025-10-13 03:55:23,569 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:55:54] 2025-10-13 03:55:23,569 | INFO     | collected zombie processes
[2025-10-12 23:55:54] 2025-10-13 03:55:23,569 | INFO     | will attempt to kill all subprocesses of pid=859696
[2025-10-12 23:55:54] 2025-10-13 03:55:23,901 | INFO     | process IDs to be killed: [859696] (in reverse order)
[2025-10-12 23:55:54] 2025-10-13 03:55:24,019 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:55:54] 2025-10-13 03:55:24,019 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:55:54] 2025-10-13 03:55:24,035 | INFO     | did not find any defunct processes belonging to 859696
[2025-10-12 23:55:54] 2025-10-13 03:55:24,047 | INFO     | did not find any defunct processes belonging to 859696
[2025-10-12 23:55:54] 2025-10-13 03:55:24,047 | INFO     | ready for new job
[2025-10-12 23:55:54] 2025-10-13 03:55:24,047 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:55:54] 2025-10-13 03:55:24,048 | INFO     | ***************************************
[2025-10-12 23:55:54] 2025-10-13 03:55:24,048 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:55:54] 2025-10-13 03:55:24,049 | INFO     | ***************************************
[2025-10-12 23:55:54] 2025-10-13 03:55:24,049 | INFO     | 
[2025-10-12 23:55:54] 2025-10-13 03:55:24,065 | INFO     | architecture information:
[2025-10-12 23:55:54] 2025-10-13 03:55:24,065 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:55:54] 2025-10-13 03:55:24,079 | INFO     | cat /etc/os-release:
[2025-10-12 23:55:54] NAME="CentOS Linux"
[2025-10-12 23:55:54] VERSION="7 (Core)"
[2025-10-12 23:55:54] ID="centos"
[2025-10-12 23:55:54] ID_LIKE="rhel fedora"
[2025-10-12 23:55:54] VERSION_ID="7"
[2025-10-12 23:55:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:55:54] ANSI_COLOR="0;31"
[2025-10-12 23:55:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:55:54] HOME_URL="https://www.centos.org/"
[2025-10-12 23:55:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:55:54] 
[2025-10-12 23:55:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:55:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:55:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:55:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:55:54] 
[2025-10-12 23:55:54] 2025-10-13 03:55:24,079 | INFO     | ***************************************
[2025-10-12 23:55:54] 2025-10-13 03:55:24,582 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-10-12 23:55:54] 2025-10-13 03:55:24,597 | INFO     | sufficient remaining disk space (168014381056 B)
[2025-10-12 23:55:54] 2025-10-13 03:55:24,597 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:55:54] 2025-10-13 03:55:24,598 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:55:54] 2025-10-13 03:55:24,598 | INFO     | update_server=False
[2025-10-12 23:55:54] 2025-10-13 03:55:24,598 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:55:54] 2025-10-13 03:55:24,598 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:55:54] 2025-10-13 03:55:24,598 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:55:54] 2025-10-13 03:55:24,599 | INFO     | aborting loop
[2025-10-12 23:55:54] 2025-10-13 03:55:25,335 | INFO     | all payload control threads have been joined
[2025-10-12 23:55:54] 2025-10-13 03:55:25,365 | INFO     | all data control threads have been joined
[2025-10-12 23:55:54] 2025-10-13 03:55:25,603 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:55:54] 2025-10-13 03:55:25,604 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:55:54] 2025-10-13 03:55:25,895 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:55:54] 2025-10-13 03:55:25,971 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:55:54] 2025-10-13 03:55:26,038 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:55:54] 2025-10-13 03:55:26,159 | INFO     | all job control threads have been joined
[2025-10-12 23:55:54] 2025-10-13 03:55:26,336 | INFO     | [payload] control thread has finished
[2025-10-12 23:55:54] 2025-10-13 03:55:26,370 | INFO     | [data] control thread has finished
[2025-10-12 23:55:54] 2025-10-13 03:55:26,622 | INFO     | [job] validate thread has finished
[2025-10-12 23:55:54] 2025-10-13 03:55:26,624 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:55:54] 2025-10-13 03:55:26,726 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:55:54] 2025-10-13 03:55:26,732 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:55:54] 2025-10-13 03:55:26,847 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:55:54] 2025-10-13 03:55:27,165 | INFO     | [job] control thread has finished
[2025-10-12 23:55:54] 2025-10-13 03:55:27,365 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:55:54] 2025-10-13 03:55:28,044 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:55:54] 2025-10-13 03:55:28,367 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:55:54] 2025-10-13 03:55:28,604 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:55:54] 2025-10-13 03:55:35,134 | INFO     | job.realtimelogging is not enabled
[2025-10-12 23:55:54] 2025-10-13 03:55:36,140 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:55:54] 2025-10-13 03:55:43,833 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:55:54] 2025-10-13 03:55:44,964 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140430818236224)>', '<ExcThread(monitor, started 140430180079360)>']
[2025-10-12 23:55:54] 2025-10-13 03:55:49,976 | INFO     | all workflow threads have been joined
[2025-10-12 23:55:54] 2025-10-13 03:55:49,976 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:55:54] 2025-10-13 03:55:49,977 | INFO     | traces error code: 0
[2025-10-12 23:55:54] 2025-10-13 03:55:49,977 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:55:54] 2025-10-13 03:55:54,329 | INFO     | PID=848988 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 23:55:54] 2025-10-13 03:55:54,329 | INFO     | .. there are 8 such processes running
[2025-10-12 23:55:54] 2025-10-13 03:55:54,329 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:55:54] 2025-10-13 03:55:54,329 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:55:54] 2025-10-13 03:55:54,329 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:55:54] 2025-10-13 03:55:54,329 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:55:54] 2025-10-13 03:55:54,329 | INFO     | [monitor] control thread has ended
[2025-10-12 23:55:54] 2025-10-13 03:55:54,409 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:55:54] 2025-10-13 03:55:54,411 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:55:54] 2025-10-13 03:55:54,412 [wrapper] pilotpid: 848988
[2025-10-12 23:55:54] 2025-10-13 03:55:54,413 [wrapper] Pilot exit status: 0
[2025-10-12 23:55:54] 2025-10-13 03:55:54,421 [wrapper] pandaids: 6840852523
[2025-10-12 23:55:54] 2025-10-13 03:55:54,483 [wrapper] cleanup supervisor_pilot  953076 848989
[2025-10-12 23:55:54] 2025-10-13 03:55:54,485 [wrapper] Test setup, not cleaning
[2025-10-12 23:55:54] 2025-10-13 03:55:54,486 [wrapper] apfmon messages muted
[2025-10-12 23:55:54] 2025-10-13 03:55:54,488 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:55:54] 2025-10-13 03:55:54,489 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:55:54]  *** Error codes and diagnostics ***
[2025-10-12 23:55:54]     "exeErrorCode": 0,
[2025-10-12 23:55:54]     "exeErrorDiag": "",
[2025-10-12 23:55:54]     "pilotErrorCode": 0,
[2025-10-12 23:55:54]     "pilotErrorDiag": "",
[2025-10-12 23:55:54]  *** Listing of results directory ***
[2025-10-12 23:55:54] total 414024
[2025-10-12 23:55:54] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 17:57 pilot3.tar.gz
[2025-10-12 23:55:54] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 18:41 queuedata.json
[2025-10-12 23:55:54] -rwx------. 1 boincer umatlas     36292 Oct 12 18:42 runpilot2-wrapper.sh
[2025-10-12 23:55:54] -rw-r--r--. 1 boincer umatlas       100 Oct 12 23:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:55:54] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 23:28 run_atlas
[2025-10-12 23:55:54] -rw-r--r--. 1 boincer umatlas       105 Oct 12 23:28 job.xml
[2025-10-12 23:55:54] -rw-r--r--. 2 boincer umatlas 220979871 Oct 12 23:28 EVNT.46676267._004625.pool.root.1
[2025-10-12 23:55:54] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 23:28 start_atlas.sh
[2025-10-12 23:55:54] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 23:28 shared
[2025-10-12 23:55:54] -rw-r--r--. 2 boincer umatlas    569683 Oct 12 23:28 input.tar.gz
[2025-10-12 23:55:54] -rw-r--r--. 1 boincer umatlas         0 Oct 12 23:28 boinc_lockfile
[2025-10-12 23:55:54] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 23:28 pandaJob.out
[2025-10-12 23:55:54] -rw-------. 1 boincer umatlas    974373 Oct 12 23:28 agis_schedconf.cvmfs.json
[2025-10-12 23:55:54] -rw-------. 1 boincer umatlas   1560580 Oct 12 23:28 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:55:54] drwx------. 5 boincer umatlas      4096 Oct 12 23:28 pilot3
[2025-10-12 23:55:54] -rw-r--r--. 1 boincer umatlas      7164 Oct 12 23:48 init_data.xml
[2025-10-12 23:55:54] -rw-------. 1 boincer umatlas 197830327 Oct 12 23:54 HITS.46676269._091352.pool.root.1
[2025-10-12 23:55:54] -rw-r--r--. 1 boincer umatlas       529 Oct 12 23:54 boinc_task_state.xml
[2025-10-12 23:55:54] -rw-------. 1 boincer umatlas      1029 Oct 12 23:55 memory_monitor_summary.json
[2025-10-12 23:55:54] -rw-------. 1 boincer umatlas        95 Oct 12 23:55 pilot_heartbeat.json
[2025-10-12 23:55:54] -rw-------. 1 boincer umatlas    355860 Oct 12 23:55 log.46676269._091352.job.log.tgz.1
[2025-10-12 23:55:54] -rw-------. 1 boincer umatlas      7770 Oct 12 23:55 heartbeat.json
[2025-10-12 23:55:54] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 23:55 boinc_mmap_file
[2025-10-12 23:55:54] -rw-r--r--. 1 boincer umatlas        27 Oct 12 23:55 wrapper_checkpoint.txt
[2025-10-12 23:55:54] -rw-------. 1 boincer umatlas       821 Oct 12 23:55 pilotlog.txt
[2025-10-12 23:55:54] -rw-------. 1 boincer umatlas    269171 Oct 12 23:55 log.46676269._091352.job.log.1
[2025-10-12 23:55:54] -rw-------. 1 boincer umatlas       357 Oct 12 23:55 output.list
[2025-10-12 23:55:54] -rw-r--r--. 1 boincer umatlas       620 Oct 12 23:55 runtime_log
[2025-10-12 23:55:54] -rw-------. 1 boincer umatlas    645120 Oct 12 23:55 result.tar.gz
[2025-10-12 23:55:54] -rw-------. 1 boincer umatlas       645 Oct 12 23:55 tyZMDmKxJS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmiCVMDmNZZXdm.diag
[2025-10-12 23:55:54] -rw-r--r--. 1 boincer umatlas      8695 Oct 12 23:55 runtime_log.err
[2025-10-12 23:55:54] -rw-r--r--. 1 boincer umatlas     21978 Oct 12 23:55 stderr.txt
[2025-10-12 23:55:54] HITS file was successfully produced:
[2025-10-12 23:55:54] -rw-------. 1 boincer umatlas 197830327 Oct 12 23:54 shared/HITS.pool.root.1
[2025-10-12 23:55:54]  *** Contents of shared directory: ***
[2025-10-12 23:55:54] total 410216
[2025-10-12 23:55:54] -rw-r--r--. 2 boincer umatlas 220979871 Oct 12 23:28 ATLAS.root_0
[2025-10-12 23:55:54] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 23:28 start_atlas.sh
[2025-10-12 23:55:54] -rw-r--r--. 2 boincer umatlas    569683 Oct 12 23:28 input.tar.gz
[2025-10-12 23:55:54] -rw-------. 1 boincer umatlas 197830327 Oct 12 23:54 HITS.pool.root.1
[2025-10-12 23:55:54] -rw-------. 1 boincer umatlas    645120 Oct 12 23:55 result.tar.gz
23:55:56 (844529): run_atlas exited; CPU time 16682.388129
23:55:56 (844529): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN