Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:38:22 (2178698): wrapper (7.7.26015): starting
13:38:22 (2178698): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 13:38:22] Arguments: --nthreads 4
[2025-10-13 13:38:22] Threads: 4
[2025-10-13 13:38:22] Checking for CVMFS
[2025-10-13 13:38:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 13:38:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 13:38:22] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 13:38:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 13:38:22] 2.9.2.0 168809 5652 98952 151660 3 57 29820757 36864001 0 130560 0 5225949 99.992 196648 854 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 13:38:22] CVMFS is ok
[2025-10-13 13:38:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 13:38:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 13:38:22] Further information can be found at the LHC@home message board.
[2025-10-13 13:38:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 13:38:22] Checking for apptainer binary...
[2025-10-13 13:38:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 13:38:22] Running /usr/bin/apptainer --version
[2025-10-13 13:38:22] apptainer version 1.4.1-1.1
[2025-10-13 13:38:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 13:38:22] thA334
[2025-10-13 13:38:22] apptainer works
[2025-10-13 13:38:22] Set ATHENA_PROC_NUMBER=4
[2025-10-13 13:38:22] Set ATHENA_CORE_NUMBER=4
[2025-10-13 13:38:22] Starting ATLAS job with PandaID=6840852521
[2025-10-13 13:38:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 14:51:41]  *** The last 200 lines of the pilot log: ***
[2025-10-13 14:51:41] 2025-10-13 12:51:08,454 | INFO     | will attempt to kill all subprocesses of pid=2189038
[2025-10-13 14:51:41] 2025-10-13 12:51:08,499 | INFO     | process IDs to be killed: [2189038] (in reverse order)
[2025-10-13 14:51:41] 2025-10-13 12:51:08,530 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 14:51:41] 2025-10-13 12:51:08,530 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 14:51:41] 2025-10-13 12:51:08,532 | INFO     | did not find any defunct processes belonging to 2189038
[2025-10-13 14:51:41] 2025-10-13 12:51:08,533 | INFO     | did not find any defunct processes belonging to 2189038
[2025-10-13 14:51:41] 2025-10-13 12:51:08,533 | INFO     | ready for new job
[2025-10-13 14:51:41] 2025-10-13 12:51:08,533 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 14:51:41] 2025-10-13 12:51:08,534 | INFO     | ***************************************
[2025-10-13 14:51:41] 2025-10-13 12:51:08,534 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 14:51:41] 2025-10-13 12:51:08,534 | INFO     | ***************************************
[2025-10-13 14:51:41] 2025-10-13 12:51:08,534 | INFO     | 
[2025-10-13 14:51:41] 2025-10-13 12:51:08,535 | INFO     | architecture information:
[2025-10-13 14:51:41] 2025-10-13 12:51:08,535 | INFO     | executing command: cat /etc/os-release
[2025-10-13 14:51:41] 2025-10-13 12:51:08,547 | INFO     | cat /etc/os-release:
[2025-10-13 14:51:41] NAME="CentOS Linux"
[2025-10-13 14:51:41] VERSION="7 (Core)"
[2025-10-13 14:51:41] ID="centos"
[2025-10-13 14:51:41] ID_LIKE="rhel fedora"
[2025-10-13 14:51:41] VERSION_ID="7"
[2025-10-13 14:51:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 14:51:41] ANSI_COLOR="0;31"
[2025-10-13 14:51:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 14:51:41] HOME_URL="https://www.centos.org/"
[2025-10-13 14:51:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 14:51:41] 
[2025-10-13 14:51:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 14:51:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 14:51:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 14:51:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 14:51:41] 
[2025-10-13 14:51:41] 2025-10-13 12:51:08,547 | INFO     | ***************************************
[2025-10-13 14:51:41] 2025-10-13 12:51:09,051 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 14:51:41] 2025-10-13 12:51:09,067 | INFO     | sufficient remaining disk space (230124683264 B)
[2025-10-13 14:51:41] 2025-10-13 12:51:09,067 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 14:51:41] 2025-10-13 12:51:09,067 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 14:51:41] 2025-10-13 12:51:09,067 | INFO     | update_server=False
[2025-10-13 14:51:41] 2025-10-13 12:51:09,067 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 14:51:41] 2025-10-13 12:51:09,067 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 14:51:41] 2025-10-13 12:51:09,068 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 14:51:41] 2025-10-13 12:51:09,068 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 14:51:41] 2025-10-13 12:51:09,068 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 14:51:41] 2025-10-13 12:51:09,068 | INFO     | aborting loop
[2025-10-13 14:51:41] 2025-10-13 12:51:09,186 | INFO     | all job control threads have been joined
[2025-10-13 14:51:41] 2025-10-13 12:51:09,430 | INFO     | all data control threads have been joined
[2025-10-13 14:51:41] 2025-10-13 12:51:10,073 | INFO     | [job] retrieve thread has finished
[2025-10-13 14:51:41] 2025-10-13 12:51:10,073 | INFO     | [job] queue monitor thread has finished
[2025-10-13 14:51:41] 2025-10-13 12:51:10,074 | INFO     | [job] job monitor thread has finished
[2025-10-13 14:51:41] 2025-10-13 12:51:10,114 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 14:51:41] 2025-10-13 12:51:10,158 | INFO     | [data] copytool_in thread has finished
[2025-10-13 14:51:41] 2025-10-13 12:51:10,159 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 14:51:41] 2025-10-13 12:51:10,192 | INFO     | [job] control thread has finished
[2025-10-13 14:51:41] 2025-10-13 12:51:10,283 | INFO     | [payload] failed_post thread has finished
[2025-10-13 14:51:41] 2025-10-13 12:51:10,436 | INFO     | [data] control thread has finished
[2025-10-13 14:51:41] 2025-10-13 12:51:10,538 | INFO     | all payload control threads have been joined
[2025-10-13 14:51:41] 2025-10-13 12:51:10,846 | INFO     | [payload] validate_post thread has finished
[2025-10-13 14:51:41] 2025-10-13 12:51:11,074 | INFO     | [data] copytool_out thread has finished
[2025-10-13 14:51:41] 2025-10-13 12:51:11,125 | INFO     | [job] validate thread has finished
[2025-10-13 14:51:41] 2025-10-13 12:51:11,157 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 14:51:41] 2025-10-13 12:51:11,544 | INFO     | [payload] control thread has finished
[2025-10-13 14:51:41] 2025-10-13 12:51:13,074 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 14:51:41] 2025-10-13 12:51:19,732 | INFO     | job.realtimelogging is not enabled
[2025-10-13 14:51:41] 2025-10-13 12:51:20,737 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 14:51:41] 2025-10-13 12:51:35,563 | INFO     | [monitor] cgroup control has ended
[2025-10-13 14:51:41] 2025-10-13 12:51:36,678 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140428602558272)>', '<ExcThread(monitor, started 140427797698304)>']
[2025-10-13 14:51:41] 2025-10-13 12:51:39,461 | INFO     | PID=2182472 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 14:51:41] 2025-10-13 12:51:39,462 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 14:51:41] 2025-10-13 12:51:39,462 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 14:51:41] 2025-10-13 12:51:39,462 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 14:51:41] 2025-10-13 12:51:39,462 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 14:51:41] 2025-10-13 12:51:39,462 | INFO     | [monitor] control thread has ended
[2025-10-13 14:51:41] 2025-10-13 12:51:41,704 | INFO     | all workflow threads have been joined
[2025-10-13 14:51:41] 2025-10-13 12:51:41,704 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 14:51:41] 2025-10-13 12:51:41,705 | INFO     | traces error code: 0
[2025-10-13 14:51:41] 2025-10-13 12:51:41,705 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 14:51:41] 2025-10-13 12:51:41,774 [wrapper] ==== pilot stdout END ====
[2025-10-13 14:51:41] 2025-10-13 12:51:41,778 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 14:51:41] 2025-10-13 12:51:41,781 [wrapper] pilotpid: 2182472
[2025-10-13 14:51:41] 2025-10-13 12:51:41,785 [wrapper] Pilot exit status: 0
[2025-10-13 14:51:41] 2025-10-13 12:51:41,795 [wrapper] pandaids: 6840852521
[2025-10-13 14:51:41] 2025-10-13 12:51:41,816 [wrapper] cleanup supervisor_pilot 2199183 2182473
[2025-10-13 14:51:41] 2025-10-13 12:51:41,819 [wrapper] Test setup, not cleaning
[2025-10-13 14:51:41] 2025-10-13 12:51:41,823 [wrapper] apfmon messages muted
[2025-10-13 14:51:41] 2025-10-13 12:51:41,826 [wrapper] ==== wrapper stdout END ====
[2025-10-13 14:51:41] 2025-10-13 12:51:41,830 [wrapper] ==== wrapper stderr END ====
[2025-10-13 14:51:41]  *** Error codes and diagnostics ***
[2025-10-13 14:51:41]     "exeErrorCode": 0,
[2025-10-13 14:51:41]     "exeErrorDiag": "",
[2025-10-13 14:51:41]     "pilotErrorCode": 0,
[2025-10-13 14:51:41]     "pilotErrorDiag": "",
[2025-10-13 14:51:41]  *** Listing of results directory ***
[2025-10-13 14:51:41] total 413676
[2025-10-13 14:51:41] -rw-r--r-- 1 boinc boinc    557409 Oct 12 23:57 pilot3.tar.gz
[2025-10-13 14:51:41] -rw-r--r-- 1 boinc boinc      5112 Oct 13 00:41 queuedata.json
[2025-10-13 14:51:41] -rwx------ 1 boinc boinc     36292 Oct 13 00:42 runpilot2-wrapper.sh
[2025-10-13 14:51:41] -rw-r--r-- 1 boinc boinc       100 Oct 13 13:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 14:51:41] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 13:38 run_atlas
[2025-10-13 14:51:41] -rw-r--r-- 1 boinc boinc       105 Oct 13 13:38 job.xml
[2025-10-13 14:51:41] -rw-r--r-- 2 boinc boinc 220979871 Oct 13 13:38 EVNT.46676267._004625.pool.root.1
[2025-10-13 14:51:41] drwxrwx--x 2 boinc boinc      4096 Oct 13 13:38 shared
[2025-10-13 14:51:41] -rw-r--r-- 2 boinc boinc    569683 Oct 13 13:38 input.tar.gz
[2025-10-13 14:51:41] -rw-r--r-- 2 boinc boinc     15120 Oct 13 13:38 start_atlas.sh
[2025-10-13 14:51:41] -rw-r--r-- 1 boinc boinc         0 Oct 13 13:38 boinc_setup_complete
[2025-10-13 14:51:41] -rw-r--r-- 1 boinc boinc      6368 Oct 13 13:38 init_data.xml
[2025-10-13 14:51:41] -rw-r--r-- 1 boinc boinc         0 Oct 13 13:38 boinc_lockfile
[2025-10-13 14:51:41] -rw-r--r-- 1 boinc boinc      2550 Oct 13 13:38 pandaJob.out
[2025-10-13 14:51:41] -rw------- 1 boinc boinc    972497 Oct 13 13:38 agis_schedconf.cvmfs.json
[2025-10-13 14:51:41] -rw------- 1 boinc boinc   1560580 Oct 13 13:38 agis_ddmendpoints.agis.ALL.json
[2025-10-13 14:51:41] drwx------ 5 boinc boinc      4096 Oct 13 13:38 pilot3
[2025-10-13 14:51:41] -rw------- 1 boinc boinc 196890275 Oct 13 14:50 HITS.46676269._091350.pool.root.1
[2025-10-13 14:51:41] -rw-r--r-- 1 boinc boinc       530 Oct 13 14:50 boinc_task_state.xml
[2025-10-13 14:51:41] -rw------- 1 boinc boinc        95 Oct 13 14:50 pilot_heartbeat.json
[2025-10-13 14:51:41] -rw------- 1 boinc boinc      1019 Oct 13 14:50 memory_monitor_summary.json
[2025-10-13 14:51:41] -rw------- 1 boinc boinc    272662 Oct 13 14:51 log.46676269._091350.job.log.tgz.1
[2025-10-13 14:51:41] -rw------- 1 boinc boinc      7765 Oct 13 14:51 heartbeat.json
[2025-10-13 14:51:41] -rw-r--r-- 1 boinc boinc        27 Oct 13 14:51 wrapper_checkpoint.txt
[2025-10-13 14:51:41] -rw-r--r-- 1 boinc boinc      8192 Oct 13 14:51 boinc_mmap_file
[2025-10-13 14:51:41] -rw------- 1 boinc boinc      4824 Oct 13 14:51 pilotlog.txt
[2025-10-13 14:51:41] -rw------- 1 boinc boinc    647314 Oct 13 14:51 log.46676269._091350.job.log.1
[2025-10-13 14:51:41] -rw------- 1 boinc boinc       357 Oct 13 14:51 output.list
[2025-10-13 14:51:41] -rw-r--r-- 1 boinc boinc       620 Oct 13 14:51 runtime_log
[2025-10-13 14:51:41] -rw------- 1 boinc boinc    942080 Oct 13 14:51 result.tar.gz
[2025-10-13 14:51:41] -rw------- 1 boinc boinc       658 Oct 13 14:51 xqWMDmKxJS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmgCVMDmXUgDXo.diag
[2025-10-13 14:51:41] -rw-r--r-- 1 boinc boinc      8777 Oct 13 14:51 runtime_log.err
[2025-10-13 14:51:41] -rw-r--r-- 1 boinc boinc     10288 Oct 13 14:51 stderr.txt
[2025-10-13 14:51:41] HITS file was successfully produced:
[2025-10-13 14:51:41] -rw------- 1 boinc boinc 196890275 Oct 13 14:50 shared/HITS.pool.root.1
[2025-10-13 14:51:41]  *** Contents of shared directory: ***
[2025-10-13 14:51:41] total 409584
[2025-10-13 14:51:41] -rw-r--r-- 2 boinc boinc 220979871 Oct 13 13:38 ATLAS.root_0
[2025-10-13 14:51:41] -rw-r--r-- 2 boinc boinc    569683 Oct 13 13:38 input.tar.gz
[2025-10-13 14:51:41] -rw-r--r-- 2 boinc boinc     15120 Oct 13 13:38 start_atlas.sh
[2025-10-13 14:51:41] -rw------- 1 boinc boinc 196890275 Oct 13 14:50 HITS.pool.root.1
[2025-10-13 14:51:41] -rw------- 1 boinc boinc    942080 Oct 13 14:51 result.tar.gz
14:51:43 (2178698): run_atlas exited; CPU time 16298.258491
14:51:43 (2178698): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN