Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:19:05 (2930881): wrapper (7.7.26015): starting
23:19:05 (2930881): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 23:19:06] Arguments: --nthreads 8
[2025-10-12 23:19:06] Threads: 8
[2025-10-12 23:19:06] Checking for CVMFS
[2025-10-12 23:19:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 23:19:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 23:19:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 23:19:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 23:19:08] 2.13.2.0 276976 137181 345608 151647 0 46 26936050 32935936 35136 16776704 0 265764158 99.601 262502204 20571 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 23:19:08] CVMFS is ok
[2025-10-12 23:19:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 23:19:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 23:19:08] Further information can be found at the LHC@home message board.
[2025-10-12 23:19:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 23:19:08] Checking for apptainer binary...
[2025-10-12 23:19:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 23:19:08] Running /usr/bin/apptainer --version
[2025-10-12 23:19:08] apptainer version 1.4.3-1.el9
[2025-10-12 23:19:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 23:19:09] c6-8-25-3.aglt2.org
[2025-10-12 23:19:09] apptainer works
[2025-10-12 23:19:09] Set ATHENA_PROC_NUMBER=8
[2025-10-12 23:19:09] Set ATHENA_CORE_NUMBER=8
[2025-10-12 23:19:09] Starting ATLAS job with PandaID=6840851795
[2025-10-12 23:19:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:45:40]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:45:40] 2025-10-13 10:44:33,629 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 06:45:40] 2025-10-13 10:44:33,629 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 06:45:40] 2025-10-13 10:44:33,684 | INFO     | fitting pss+swap vs Time
[2025-10-13 06:45:40] 2025-10-13 10:44:33,685 | INFO     | sum of square deviations: 25172842284.364826
[2025-10-13 06:45:40] 2025-10-13 10:44:33,731 | INFO     | sum of deviations: 131923748144.75505
[2025-10-13 06:45:40] 2025-10-13 10:44:33,731 | INFO     | mean x: 1760338996.7713625
[2025-10-13 06:45:40] 2025-10-13 10:44:33,731 | INFO     | mean y: 2131587.4318706696
[2025-10-13 06:45:40] 2025-10-13 10:44:33,731 | INFO     | -- intersect: -9223307313.589542
[2025-10-13 06:45:40] 2025-10-13 10:44:33,731 | INFO     | intersect: -9223307313.589542
[2025-10-13 06:45:40] 2025-10-13 10:44:33,756 | INFO     | chi2: 5.970194200974419
[2025-10-13 06:45:40] 2025-10-13 10:44:33,757 | INFO     | sum of square deviations: 24310839815.01647
[2025-10-13 06:45:40] 2025-10-13 10:44:33,765 | INFO     | sum of deviations: 151845642391.10992
[2025-10-13 06:45:40] 2025-10-13 10:44:33,765 | INFO     | mean x: 1760338844.2733645
[2025-10-13 06:45:40] 2025-10-13 10:44:33,765 | INFO     | mean y: 2135071.2640186916
[2025-10-13 06:45:40] 2025-10-13 10:44:33,765 | INFO     | -- intersect: -10992951263.417255
[2025-10-13 06:45:40] 2025-10-13 10:44:33,765 | INFO     | intersect: -10992951263.417255
[2025-10-13 06:45:40] 2025-10-13 10:44:33,766 | INFO     | chi2: 5.2154864032898605
[2025-10-13 06:45:40] 2025-10-13 10:44:33,766 | INFO     | current chi2=5.2154864032898605 (change=12.641260439423888 %)
[2025-10-13 06:45:40] 2025-10-13 10:44:33,766 | INFO     | right removable region: 427
[2025-10-13 06:45:40] 2025-10-13 10:44:33,767 | INFO     | sum of square deviations: 24310714946.355217
[2025-10-13 06:45:40] 2025-10-13 10:44:33,837 | INFO     | sum of deviations: 24022189496.66359
[2025-10-13 06:45:40] 2025-10-13 10:44:33,838 | INFO     | mean x: 1760339149.2803738
[2025-10-13 06:45:40] 2025-10-13 10:44:33,838 | INFO     | mean y: 2150652.6028037383
[2025-10-13 06:45:40] 2025-10-13 10:44:33,838 | INFO     | -- intersect: -1737296365.542116
[2025-10-13 06:45:40] 2025-10-13 10:44:33,838 | INFO     | intersect: -1737296365.542116
[2025-10-13 06:45:40] 2025-10-13 10:44:33,839 | INFO     | chi2: 2.7516532457957616
[2025-10-13 06:45:40] 2025-10-13 10:44:33,839 | INFO     | current chi2=2.7516532457957616 (change=53.910155127840675 %)
[2025-10-13 06:45:40] 2025-10-13 10:44:33,840 | INFO     | sum of square deviations: 23468520944.851032
[2025-10-13 06:45:40] 2025-10-13 10:44:33,864 | INFO     | sum of deviations: -36323918619.42553
[2025-10-13 06:45:40] 2025-10-13 10:44:33,865 | INFO     | mean x: 1760339301.787234
[2025-10-13 06:45:40] 2025-10-13 10:44:33,865 | INFO     | mean y: 2161560.1063829786
[2025-10-13 06:45:40] 2025-10-13 10:44:33,883 | INFO     | -- intersect: 2726765368.3717155
[2025-10-13 06:45:40] 2025-10-13 10:44:33,883 | INFO     | intersect: 2726765368.3717155
[2025-10-13 06:45:40] 2025-10-13 10:44:33,884 | INFO     | chi2: 1.6980502969991647
[2025-10-13 06:45:40] 2025-10-13 10:44:33,885 | INFO     | current chi2=1.6980502969991647 (change=38.289815419380766 %)
[2025-10-13 06:45:40] 2025-10-13 10:44:33,885 | INFO     | sum of square deviations: 22646027778.392345
[2025-10-13 06:45:40] 2025-10-13 10:44:33,911 | INFO     | sum of deviations: -74227850008.52628
[2025-10-13 06:45:40] 2025-10-13 10:44:33,912 | INFO     | mean x: 1760339454.291866
[2025-10-13 06:45:40] 2025-10-13 10:44:33,912 | INFO     | mean y: 2168583.3157894737
[2025-10-13 06:45:40] 2025-10-13 10:44:33,912 | INFO     | -- intersect: 5772108206.102197
[2025-10-13 06:45:40] 2025-10-13 10:44:33,912 | INFO     | intersect: 5772108206.102197
[2025-10-13 06:45:40] 2025-10-13 10:44:33,913 | INFO     | chi2: 1.288789457208026
[2025-10-13 06:45:40] 2025-10-13 10:44:33,935 | INFO     | current chi2=1.288789457208026 (change=24.10180902853079 %)
[2025-10-13 06:45:40] 2025-10-13 10:44:33,935 | INFO     | left removable region: 30
[2025-10-13 06:45:40] 2025-10-13 10:44:33,936 | INFO     | sum of square deviations: 19401464754.80106
[2025-10-13 06:45:40] 2025-10-13 10:44:33,965 | INFO     | sum of deviations: -35682828214.264404
[2025-10-13 06:45:40] 2025-10-13 10:44:33,965 | INFO     | mean x: 1760339728.7858942
[2025-10-13 06:45:40] 2025-10-13 10:44:33,966 | INFO     | mean y: 2168916.702770781
[2025-10-13 06:45:40] 2025-10-13 10:44:33,966 | INFO     | -- intersect: 3239754374.03109
[2025-10-13 06:45:40] 2025-10-13 10:44:33,966 | INFO     | intersect: 3239754374.03109
[2025-10-13 06:45:40] 2025-10-13 10:44:33,966 | INFO     | chi2: 0.3761206968676284
[2025-10-13 06:45:40] 2025-10-13 10:44:33,967 | INFO     | -- intersect: 3239754374.03109
[2025-10-13 06:45:40] 2025-10-13 10:44:33,967 | INFO     | current memory leak: -1.84 B/s (using 397 data points, chi2=0.38)
[2025-10-13 06:45:40] 2025-10-13 10:44:33,988 | INFO     | could have reported an average CPU frequency of 2656 MHz (18 samples)
[2025-10-13 06:45:40] 2025-10-13 10:44:33,988 | INFO     | ..............................
[2025-10-13 06:45:40] 2025-10-13 10:44:33,989 | INFO     | . Timing measurements:
[2025-10-13 06:45:40] 2025-10-13 10:44:33,989 | INFO     | . get job = 0 s
[2025-10-13 06:45:40] 2025-10-13 10:44:33,989 | INFO     | . initial setup = 12 s
[2025-10-13 06:45:40] 2025-10-13 10:44:33,989 | INFO     | . payload setup = 50 s
[2025-10-13 06:45:40] 2025-10-13 10:44:33,989 | INFO     | . stage-in = 0 s
[2025-10-13 06:45:40] 2025-10-13 10:44:33,989 | INFO     | . payload execution = 26431 s
[2025-10-13 06:45:40] 2025-10-13 10:44:33,989 | INFO     | . stage-out = 7 s
[2025-10-13 06:45:40] 2025-10-13 10:44:33,989 | INFO     | . log creation = 2 s
[2025-10-13 06:45:40] 2025-10-13 10:44:33,989 | INFO     | ..............................
[2025-10-13 06:45:40] 2025-10-13 10:44:35,055 | INFO     | 
[2025-10-13 06:45:40] 2025-10-13 10:44:35,056 | INFO     | job summary report
[2025-10-13 06:45:40] 2025-10-13 10:44:35,056 | INFO     | --------------------------------------------------
[2025-10-13 06:45:40] 2025-10-13 10:44:35,056 | INFO     | PanDA job id: 6840851795
[2025-10-13 06:45:40] 2025-10-13 10:44:35,056 | INFO     | task id: 46676269
[2025-10-13 06:45:40] 2025-10-13 10:44:35,056 | INFO     | errors: (none)
[2025-10-13 06:45:40] 2025-10-13 10:44:35,056 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 06:45:40] 2025-10-13 10:44:35,056 | INFO     | pilot state: finished 
[2025-10-13 06:45:40] 2025-10-13 10:44:35,056 | INFO     | transexitcode: 0
[2025-10-13 06:45:40] 2025-10-13 10:44:35,056 | INFO     | exeerrorcode: 0
[2025-10-13 06:45:40] 2025-10-13 10:44:35,056 | INFO     | exeerrordiag: 
[2025-10-13 06:45:40] 2025-10-13 10:44:35,056 | INFO     | exitcode: 0
[2025-10-13 06:45:40] 2025-10-13 10:44:35,057 | INFO     | exitmsg: OK
[2025-10-13 06:45:40] 2025-10-13 10:44:35,057 | INFO     | cpuconsumptiontime: 49316 s
[2025-10-13 06:45:40] 2025-10-13 10:44:35,057 | INFO     | nevents: 400
[2025-10-13 06:45:40] 2025-10-13 10:44:35,057 | INFO     | neventsw: 0
[2025-10-13 06:45:40] 2025-10-13 10:44:35,057 | INFO     | pid: 2948238
[2025-10-13 06:45:40] 2025-10-13 10:44:35,057 | INFO     | pgrp: 2948238
[2025-10-13 06:45:40] 2025-10-13 10:44:35,057 | INFO     | corecount: 8
[2025-10-13 06:45:40] 2025-10-13 10:44:35,057 | INFO     | event service: False
[2025-10-13 06:45:40] 2025-10-13 10:44:35,057 | INFO     | sizes: {0: 2348686, 2: 2348714, 3: 2348714, 4: 2348885, 15: 2348913, 27: 2348941, 38: 2349097, 42: 2349387, 50: 2349443, 26488: 2385353, 26489: 2385352, 26497: 239
[2025-10-13 06:45:40] 2025-10-13 10:44:35,057 | INFO     | --------------------------------------------------
[2025-10-13 06:45:40] 2025-10-13 10:44:35,057 | INFO     | 
[2025-10-13 06:45:40] 2025-10-13 10:44:35,058 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-13 06:45:40] 2025-10-13 10:44:35,167 | INFO     | time since job start (26635s) is within the limit (172800.0s)
[2025-10-13 06:45:40] 2025-10-13 10:44:35,291 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 06:45:40] 2025-10-13 10:44:35,292 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 06:45:40] 2025-10-13 10:44:35,292 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 06:45:40] 2025-10-13 10:44:35,292 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 06:45:40] 2025-10-13 10:44:35,292 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 06:45:40] 2025-10-13 10:44:35,292 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 06:45:40] 2025-10-13 10:44:35,292 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 06:45:40] 2025-10-13 10:44:35,292 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 06:45:40] 2025-10-13 10:44:35,292 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 06:45:40] 2025-10-13 10:44:35,292 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 06:45:40] 2025-10-13 10:44:35,292 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 06:45:40] 2025-10-13 10:44:35,293 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 06:45:40] 2025-10-13 10:44:35,293 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 06:45:40] 2025-10-13 10:44:35,293 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 06:45:40] 2025-10-13 10:44:35,293 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 06:45:40] 2025-10-13 10:44:35,293 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 06:45:40] 2025-10-13 10:44:35,293 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 06:45:40] 2025-10-13 10:44:35,293 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 06:45:40] 2025-10-13 10:44:35,293 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 06:45:40] 2025-10-13 10:44:35,293 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 06:45:40] 2025-10-13 10:44:35,294 | INFO     | job 6840851795 has completed (purged errors)
[2025-10-13 06:45:40] 2025-10-13 10:44:35,294 | INFO     | overall cleanup function is called
[2025-10-13 06:45:40] 2025-10-13 10:44:36,325 | INFO     | --- collectZombieJob: --- 10, [2948238]
[2025-10-13 06:45:40] 2025-10-13 10:44:36,325 | INFO     | zombie collector waiting for pid 2948238
[2025-10-13 06:45:40] 2025-10-13 10:44:36,326 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 06:45:40] 2025-10-13 10:44:36,326 | INFO     | collected zombie processes
[2025-10-13 06:45:40] 2025-10-13 10:44:36,326 | INFO     | will attempt to kill all subprocesses of pid=2948238
[2025-10-13 06:45:40] 2025-10-13 10:44:37,267 | INFO     | process IDs to be killed: [2948238] (in reverse order)
[2025-10-13 06:45:40] 2025-10-13 10:44:38,388 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 06:45:40] 2025-10-13 10:44:38,389 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 06:45:40] 2025-10-13 10:44:38,488 | INFO     | did not find any defunct processes belonging to 2948238
[2025-10-13 06:45:40] 2025-10-13 10:44:38,571 | INFO     | did not find any defunct processes belonging to 2948238
[2025-10-13 06:45:40] 2025-10-13 10:44:38,572 | INFO     | ready for new job
[2025-10-13 06:45:40] 2025-10-13 10:44:38,572 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:45:40] 2025-10-13 10:44:38,597 | INFO     | ***************************************
[2025-10-13 06:45:40] 2025-10-13 10:44:38,597 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:45:40] 2025-10-13 10:44:38,597 | INFO     | ***************************************
[2025-10-13 06:45:40] 2025-10-13 10:44:38,597 | INFO     | 
[2025-10-13 06:45:40] 2025-10-13 10:44:38,656 | INFO     | architecture information:
[2025-10-13 06:45:40] 2025-10-13 10:44:38,661 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:45:40] 2025-10-13 10:44:38,776 | INFO     | cat /etc/os-release:
[2025-10-13 06:45:40] NAME="CentOS Linux"
[2025-10-13 06:45:40] VERSION="7 (Core)"
[2025-10-13 06:45:40] ID="centos"
[2025-10-13 06:45:40] ID_LIKE="rhel fedora"
[2025-10-13 06:45:40] VERSION_ID="7"
[2025-10-13 06:45:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:45:40] ANSI_COLOR="0;31"
[2025-10-13 06:45:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:45:40] HOME_URL="https://www.centos.org/"
[2025-10-13 06:45:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:45:40] 
[2025-10-13 06:45:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:45:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:45:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:45:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:45:40] 
[2025-10-13 06:45:40] 2025-10-13 10:44:38,776 | INFO     | ***************************************
[2025-10-13 06:45:40] 2025-10-13 10:44:39,279 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-13 06:45:40] 2025-10-13 10:44:39,397 | INFO     | sufficient remaining disk space (74155294720 B)
[2025-10-13 06:45:40] 2025-10-13 10:44:39,397 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:45:40] 2025-10-13 10:44:39,398 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:45:40] 2025-10-13 10:44:39,398 | INFO     | update_server=False
[2025-10-13 06:45:40] 2025-10-13 10:44:39,398 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:45:40] 2025-10-13 10:44:39,409 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:45:40] 2025-10-13 10:44:39,697 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:45:40] 2025-10-13 10:44:39,766 | INFO     | all data control threads have been joined
[2025-10-13 06:45:40] 2025-10-13 10:44:39,834 | INFO     | all job control threads have been joined
[2025-10-13 06:45:40] 2025-10-13 10:44:40,275 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:45:40] 2025-10-13 10:44:40,276 | INFO     | aborting loop
[2025-10-13 06:45:40] 2025-10-13 10:44:40,404 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:45:40] 2025-10-13 10:44:40,467 | INFO     | all payload control threads have been joined
[2025-10-13 06:45:40] 2025-10-13 10:44:40,703 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:45:40] 2025-10-13 10:44:40,704 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:45:40] 2025-10-13 10:44:40,772 | INFO     | [data] control thread has finished
[2025-10-13 06:45:40] 2025-10-13 10:44:40,773 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:45:40] 2025-10-13 10:44:40,840 | INFO     | [job] control thread has finished
[2025-10-13 06:45:40] 2025-10-13 10:44:40,882 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:45:40] 2025-10-13 10:44:40,883 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:45:40] 2025-10-13 10:44:41,133 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:45:40] 2025-10-13 10:44:41,221 | INFO     | [job] validate thread has finished
[2025-10-13 06:45:40] 2025-10-13 10:44:41,250 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:45:40] 2025-10-13 10:44:41,251 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:45:40] 2025-10-13 10:44:41,281 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:45:40] 2025-10-13 10:44:41,416 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:45:40] 2025-10-13 10:44:41,473 | INFO     | [payload] control thread has finished
[2025-10-13 06:45:40] 2025-10-13 10:44:41,491 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:45:40] 2025-10-13 10:44:45,514 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:45:40] 2025-10-13 10:45:11,880 | INFO     | PID=2936777 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 06:45:40] 2025-10-13 10:45:11,880 | INFO     | .. there are 40 such processes running
[2025-10-13 06:45:40] 2025-10-13 10:45:11,905 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:45:40] 2025-10-13 10:45:11,905 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:45:40] 2025-10-13 10:45:11,905 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:45:40] 2025-10-13 10:45:29,528 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:45:40] 2025-10-13 10:45:31,317 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140264634398528)>', '<ExcThread(monitor, started 140263682987776)>']
[2025-10-13 06:45:40] 2025-10-13 10:45:32,049 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:45:40] 2025-10-13 10:45:32,049 | INFO     | [monitor] control thread has ended
[2025-10-13 06:45:40] 2025-10-13 10:45:36,343 | INFO     | all workflow threads have been joined
[2025-10-13 06:45:40] 2025-10-13 10:45:36,343 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:45:40] 2025-10-13 10:45:36,344 | INFO     | traces error code: 0
[2025-10-13 06:45:40] 2025-10-13 10:45:36,344 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:45:40] 2025-10-13 10:45:38,068 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:45:40] 2025-10-13 10:45:38,107 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:45:40] 2025-10-13 10:45:38,155 [wrapper] pilotpid: 2936777
[2025-10-13 06:45:40] 2025-10-13 10:45:38,279 [wrapper] Pilot exit status: 0
[2025-10-13 06:45:40] 2025-10-13 10:45:38,413 [wrapper] pandaids: 6840851795
[2025-10-13 06:45:40] 2025-10-13 10:45:39,270 [wrapper] cleanup supervisor_pilot  461218 2936778
[2025-10-13 06:45:40] 2025-10-13 10:45:39,307 [wrapper] Test setup, not cleaning
[2025-10-13 06:45:40] 2025-10-13 10:45:39,323 [wrapper] apfmon messages muted
[2025-10-13 06:45:40] 2025-10-13 10:45:39,379 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:45:40] 2025-10-13 10:45:39,404 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:45:40]  *** Error codes and diagnostics ***
[2025-10-13 06:45:40]     "exeErrorCode": 0,
[2025-10-13 06:45:40]     "exeErrorDiag": "",
[2025-10-13 06:45:40]     "pilotErrorCode": 0,
[2025-10-13 06:45:40]     "pilotErrorDiag": "",
[2025-10-13 06:45:40]  *** Listing of results directory ***
[2025-10-13 06:45:40] total 413300
[2025-10-13 06:45:40] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 17:57 pilot3.tar.gz
[2025-10-13 06:45:40] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 18:18 queuedata.json
[2025-10-13 06:45:40] -rwx------. 1 boincer umatlas     36292 Oct 12 18:19 runpilot2-wrapper.sh
[2025-10-13 06:45:40] -rw-r--r--. 1 boincer umatlas       100 Oct 12 23:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:45:40] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 23:19 run_atlas
[2025-10-13 06:45:40] -rw-r--r--. 1 boincer umatlas       105 Oct 12 23:19 job.xml
[2025-10-13 06:45:40] -rw-r--r--. 2 boincer umatlas 219446787 Oct 12 23:19 EVNT.46676267._004610.pool.root.1
[2025-10-13 06:45:40] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 23:19 input.tar.gz
[2025-10-13 06:45:40] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 23:19 start_atlas.sh
[2025-10-13 06:45:40] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 23:19 shared
[2025-10-13 06:45:40] -rw-r--r--. 1 boincer umatlas         0 Oct 12 23:19 boinc_lockfile
[2025-10-13 06:45:40] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 23:19 pandaJob.out
[2025-10-13 06:45:40] -rw-------. 1 boincer umatlas    974373 Oct 12 23:20 agis_schedconf.cvmfs.json
[2025-10-13 06:45:40] drwx------. 5 boincer umatlas      4096 Oct 12 23:20 pilot3
[2025-10-13 06:45:40] -rw-------. 1 boincer umatlas 192838920 Oct 13 06:41 HITS.46676269._090974.pool.root.1
[2025-10-13 06:45:40] -rw-r--r--. 1 boincer umatlas       531 Oct 13 06:42 boinc_task_state.xml
[2025-10-13 06:45:40] -rw-------. 1 boincer umatlas      1043 Oct 13 06:43 memory_monitor_summary.json
[2025-10-13 06:45:40] -rw-------. 1 boincer umatlas   1560580 Oct 13 06:43 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:45:40] -rw-------. 1 boincer umatlas    601303 Oct 13 06:43 log.46676269._090974.job.log.tgz.1
[2025-10-13 06:45:40] -rw-------. 1 boincer umatlas      7832 Oct 13 06:44 heartbeat.json
[2025-10-13 06:45:40] -rw-r--r--. 1 boincer umatlas      6856 Oct 13 06:45 init_data.xml
[2025-10-13 06:45:40] -rw-------. 1 boincer umatlas        95 Oct 13 06:45 pilot_heartbeat.json
[2025-10-13 06:45:40] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 06:45 boinc_mmap_file
[2025-10-13 06:45:40] -rw-r--r--. 1 boincer umatlas        28 Oct 13 06:45 wrapper_checkpoint.txt
[2025-10-13 06:45:40] -rw-------. 1 boincer umatlas      4824 Oct 13 06:45 pilotlog.txt
[2025-10-13 06:45:40] -rw-------. 1 boincer umatlas   2917311 Oct 13 06:45 log.46676269._090974.job.log.1
[2025-10-13 06:45:40] -rw-------. 1 boincer umatlas       357 Oct 13 06:45 output.list
[2025-10-13 06:45:40] -rw-r--r--. 1 boincer umatlas       620 Oct 13 06:45 runtime_log
[2025-10-13 06:45:40] -rw-------. 1 boincer umatlas   3532800 Oct 13 06:45 result.tar.gz
[2025-10-13 06:45:40] -rw-r--r--. 1 boincer umatlas      8709 Oct 13 06:45 runtime_log.err
[2025-10-13 06:45:40] -rw-------. 1 boincer umatlas       658 Oct 13 06:45 FaALDmkaJS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmp9UMDmLCeLkm.diag
[2025-10-13 06:45:40] -rw-r--r--. 1 boincer umatlas     21053 Oct 13 06:45 stderr.txt
[2025-10-13 06:45:40] HITS file was successfully produced:
[2025-10-13 06:45:40] -rw-------. 1 boincer umatlas 192838920 Oct 13 06:41 shared/HITS.pool.root.1
[2025-10-13 06:45:40]  *** Contents of shared directory: ***
[2025-10-13 06:45:40] total 406660
[2025-10-13 06:45:40] -rw-r--r--. 2 boincer umatlas 219446787 Oct 12 23:19 ATLAS.root_0
[2025-10-13 06:45:40] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 23:19 input.tar.gz
[2025-10-13 06:45:40] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 23:19 start_atlas.sh
[2025-10-13 06:45:40] -rw-------. 1 boincer umatlas 192838920 Oct 13 06:41 HITS.pool.root.1
[2025-10-13 06:45:40] -rw-------. 1 boincer umatlas   3532800 Oct 13 06:45 result.tar.gz
06:45:41 (2930881): run_atlas exited; CPU time 50802.813890
06:45:41 (2930881): called boinc_finish(0)

</stderr_txt>
]]>

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