Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:30:45 (591886): wrapper (7.7.26015): starting
23:30:45 (591886): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 23:30:45] Arguments: --nthreads 8
[2025-10-12 23:30:45] Threads: 8
[2025-10-12 23:30:45] Checking for CVMFS
[2025-10-12 23:30:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 23:30:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 23:30:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 23:30:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 23:30:46] 2.13.2.0 1187368 124736 179792 151647 3 352 36269543 40960001 26116 16776704 0 347642499 99.683 294998844 33963 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 23:30:46] CVMFS is ok
[2025-10-12 23:30:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 23:30:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 23:30:46] Further information can be found at the LHC@home message board.
[2025-10-12 23:30:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 23:30:46] Checking for apptainer binary...
[2025-10-12 23:30:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 23:30:46] Running /usr/bin/apptainer --version
[2025-10-12 23:30:46] apptainer version 1.4.3-1.el9
[2025-10-12 23:30:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 23:30:47] c-212-19.aglt2.org
[2025-10-12 23:30:47] apptainer works
[2025-10-12 23:30:47] Set ATHENA_PROC_NUMBER=8
[2025-10-12 23:30:47] Set ATHENA_CORE_NUMBER=8
[2025-10-12 23:30:47] Starting ATLAS job with PandaID=6840749280
[2025-10-12 23:30:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 02:48:40]  *** The last 200 lines of the pilot log: ***
[2025-10-13 02:48:40] 2025-10-13 06:47:57,987 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 02:48:40] 2025-10-13 06:47:57,996 | INFO     | fitting pss+swap vs Time
[2025-10-13 02:48:40] 2025-10-13 06:47:58,001 | INFO     | sum of square deviations: 2229142276.994829
[2025-10-13 02:48:40] 2025-10-13 06:47:58,002 | INFO     | sum of deviations: 64276355031.15024
[2025-10-13 02:48:40] 2025-10-13 06:47:58,003 | INFO     | mean x: 1760332167.0051813
[2025-10-13 02:48:40] 2025-10-13 06:47:58,003 | INFO     | mean y: 2383078.8497409327
[2025-10-13 02:48:40] 2025-10-13 06:47:58,003 | INFO     | -- intersect: -50756034859.24473
[2025-10-13 02:48:40] 2025-10-13 06:47:58,003 | INFO     | intersect: -50756034859.24473
[2025-10-13 02:48:40] 2025-10-13 06:47:58,003 | INFO     | chi2: 4.339803115068227
[2025-10-13 02:48:40] 2025-10-13 06:47:58,004 | INFO     | sum of square deviations: 2060339416.9946816
[2025-10-13 02:48:40] 2025-10-13 06:47:58,004 | INFO     | sum of deviations: 85828368877.03188
[2025-10-13 02:48:40] 2025-10-13 06:47:58,009 | INFO     | mean x: 1760332014.505319
[2025-10-13 02:48:40] 2025-10-13 06:47:58,009 | INFO     | mean y: 2402208.9680851065
[2025-10-13 02:48:40] 2025-10-13 06:47:58,009 | INFO     | -- intersect: -73328440389.478
[2025-10-13 02:48:40] 2025-10-13 06:47:58,009 | INFO     | intersect: -73328440389.478
[2025-10-13 02:48:40] 2025-10-13 06:47:58,009 | INFO     | chi2: 2.94602269900826
[2025-10-13 02:48:40] 2025-10-13 06:47:58,009 | INFO     | current chi2=2.94602269900826 (change=32.11621308857591 %)
[2025-10-13 02:48:40] 2025-10-13 06:47:58,010 | INFO     | sum of square deviations: 1900280906.9945261
[2025-10-13 02:48:40] 2025-10-13 06:47:58,011 | INFO     | sum of deviations: 82934836024.56285
[2025-10-13 02:48:40] 2025-10-13 06:47:58,011 | INFO     | mean x: 1760331862.0054646
[2025-10-13 02:48:40] 2025-10-13 06:47:58,011 | INFO     | mean y: 2399451.43715847
[2025-10-13 02:48:40] 2025-10-13 06:47:58,011 | INFO     | -- intersect: -76824575858.82793
[2025-10-13 02:48:40] 2025-10-13 06:47:58,011 | INFO     | intersect: -76824575858.82793
[2025-10-13 02:48:40] 2025-10-13 06:47:58,012 | INFO     | chi2: 2.943839100621924
[2025-10-13 02:48:40] 2025-10-13 06:47:58,012 | INFO     | current chi2=2.943839100621924 (change=0.07412021594642564 %)
[2025-10-13 02:48:40] 2025-10-13 06:47:58,012 | INFO     | right removable region: 182
[2025-10-13 02:48:40] 2025-10-13 06:47:58,012 | INFO     | sum of square deviations: 2060338806.9946816
[2025-10-13 02:48:40] 2025-10-13 06:47:58,017 | INFO     | sum of deviations: 16040467351.47873
[2025-10-13 02:48:40] 2025-10-13 06:47:58,017 | INFO     | mean x: 1760332319.505319
[2025-10-13 02:48:40] 2025-10-13 06:47:58,017 | INFO     | mean y: 2426513.5212765955
[2025-10-13 02:48:40] 2025-10-13 06:47:58,017 | INFO     | -- intersect: -13702384075.357168
[2025-10-13 02:48:40] 2025-10-13 06:47:58,018 | INFO     | intersect: -13702384075.357168
[2025-10-13 02:48:40] 2025-10-13 06:47:58,018 | INFO     | chi2: 1.810573656243923
[2025-10-13 02:48:40] 2025-10-13 06:47:58,018 | INFO     | current chi2=1.810573656243923 (change=58.27982034582556 %)
[2025-10-13 02:48:40] 2025-10-13 06:47:58,018 | INFO     | sum of square deviations: 1900279686.9945261
[2025-10-13 02:48:40] 2025-10-13 06:47:58,019 | INFO     | sum of deviations: 1133008987.754057
[2025-10-13 02:48:40] 2025-10-13 06:47:58,019 | INFO     | mean x: 1760332472.0054646
[2025-10-13 02:48:40] 2025-10-13 06:47:58,019 | INFO     | mean y: 2440625.2459016396
[2025-10-13 02:48:40] 2025-10-13 06:47:58,020 | INFO     | -- intersect: -1047127249.3504726
[2025-10-13 02:48:40] 2025-10-13 06:47:58,020 | INFO     | intersect: -1047127249.3504726
[2025-10-13 02:48:40] 2025-10-13 06:47:58,020 | INFO     | chi2: 1.5556331937697523
[2025-10-13 02:48:40] 2025-10-13 06:47:58,020 | INFO     | current chi2=1.5556331937697523 (change=14.080645744236142 %)
[2025-10-13 02:48:40] 2025-10-13 06:47:58,020 | INFO     | left removable region: 20
[2025-10-13 02:48:40] 2025-10-13 06:47:58,020 | INFO     | sum of square deviations: 1318272556.493832
[2025-10-13 02:48:40] 2025-10-13 06:47:58,025 | INFO     | sum of deviations: 12413738457.814817
[2025-10-13 02:48:40] 2025-10-13 06:47:58,025 | INFO     | mean x: 1760332441.506173
[2025-10-13 02:48:40] 2025-10-13 06:47:58,035 | INFO     | mean y: 2471868.685185185
[2025-10-13 02:48:40] 2025-10-13 06:47:58,035 | INFO     | -- intersect: -16573998922.593456
[2025-10-13 02:48:40] 2025-10-13 06:47:58,035 | INFO     | intersect: -16573998922.593456
[2025-10-13 02:48:40] 2025-10-13 06:47:58,036 | INFO     | chi2: 0.05205638495505272
[2025-10-13 02:48:40] 2025-10-13 06:47:58,036 | INFO     | -- intersect: -16573998922.593456
[2025-10-13 02:48:40] 2025-10-13 06:47:58,036 | INFO     | current memory leak: 9.42 B/s (using 162 data points, chi2=0.05)
[2025-10-13 02:48:40] 2025-10-13 06:47:58,037 | INFO     | could have reported an average CPU frequency of 3102 MHz (10 samples)
[2025-10-13 02:48:40] 2025-10-13 06:47:58,037 | INFO     | ..............................
[2025-10-13 02:48:40] 2025-10-13 06:47:58,037 | INFO     | . Timing measurements:
[2025-10-13 02:48:40] 2025-10-13 06:47:58,037 | INFO     | . get job = 0 s
[2025-10-13 02:48:40] 2025-10-13 06:47:58,037 | INFO     | . initial setup = 3 s
[2025-10-13 02:48:40] 2025-10-13 06:47:58,038 | INFO     | . payload setup = 10 s
[2025-10-13 02:48:40] 2025-10-13 06:47:58,038 | INFO     | . stage-in = 0 s
[2025-10-13 02:48:40] 2025-10-13 06:47:58,038 | INFO     | . payload execution = 11742 s
[2025-10-13 02:48:40] 2025-10-13 06:47:58,038 | INFO     | . stage-out = 3 s
[2025-10-13 02:48:40] 2025-10-13 06:47:58,038 | INFO     | . log creation = 0 s
[2025-10-13 02:48:40] 2025-10-13 06:47:58,038 | INFO     | ..............................
[2025-10-13 02:48:40] 2025-10-13 06:47:58,279 | INFO     | 
[2025-10-13 02:48:40] 2025-10-13 06:47:58,279 | INFO     | job summary report
[2025-10-13 02:48:40] 2025-10-13 06:47:58,279 | INFO     | --------------------------------------------------
[2025-10-13 02:48:40] 2025-10-13 06:47:58,279 | INFO     | PanDA job id: 6840749280
[2025-10-13 02:48:40] 2025-10-13 06:47:58,279 | INFO     | task id: 46676269
[2025-10-13 02:48:40] 2025-10-13 06:47:58,279 | INFO     | errors: (none)
[2025-10-13 02:48:40] 2025-10-13 06:47:58,279 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 02:48:40] 2025-10-13 06:47:58,280 | INFO     | pilot state: finished 
[2025-10-13 02:48:40] 2025-10-13 06:47:58,280 | INFO     | transexitcode: 0
[2025-10-13 02:48:40] 2025-10-13 06:47:58,280 | INFO     | exeerrorcode: 0
[2025-10-13 02:48:40] 2025-10-13 06:47:58,280 | INFO     | exeerrordiag: 
[2025-10-13 02:48:40] 2025-10-13 06:47:58,280 | INFO     | exitcode: 0
[2025-10-13 02:48:40] 2025-10-13 06:47:58,280 | INFO     | exitmsg: OK
[2025-10-13 02:48:40] 2025-10-13 06:47:58,280 | INFO     | cpuconsumptiontime: 36080 s
[2025-10-13 02:48:40] 2025-10-13 06:47:58,280 | INFO     | nevents: 400
[2025-10-13 02:48:40] 2025-10-13 06:47:58,280 | INFO     | neventsw: 0
[2025-10-13 02:48:40] 2025-10-13 06:47:58,280 | INFO     | pid: 603603
[2025-10-13 02:48:40] 2025-10-13 06:47:58,280 | INFO     | pgrp: 603603
[2025-10-13 02:48:40] 2025-10-13 06:47:58,280 | INFO     | corecount: 8
[2025-10-13 02:48:40] 2025-10-13 06:47:58,280 | INFO     | event service: False
[2025-10-13 02:48:40] 2025-10-13 06:47:58,280 | INFO     | sizes: {0: 2348686, 1: 2348885, 10: 2349147, 12: 2349175, 11756: 2378666, 11760: 2387664, 11762: 2387848, 11787: 2388042}
[2025-10-13 02:48:40] 2025-10-13 06:47:58,280 | INFO     | --------------------------------------------------
[2025-10-13 02:48:40] 2025-10-13 06:47:58,280 | INFO     | 
[2025-10-13 02:48:40] 2025-10-13 06:47:58,281 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-13 02:48:40] 2025-10-13 06:47:58,349 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 02:48:40] 2025-10-13 06:47:58,350 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 02:48:40] 2025-10-13 06:47:58,350 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 02:48:40] 2025-10-13 06:47:58,350 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 02:48:40] 2025-10-13 06:47:58,350 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 02:48:40] 2025-10-13 06:47:58,350 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 02:48:40] 2025-10-13 06:47:58,350 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 02:48:40] 2025-10-13 06:47:58,350 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 02:48:40] 2025-10-13 06:47:58,350 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 02:48:40] 2025-10-13 06:47:58,350 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 02:48:40] 2025-10-13 06:47:58,350 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 02:48:40] 2025-10-13 06:47:58,350 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 02:48:40] 2025-10-13 06:47:58,350 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 02:48:40] 2025-10-13 06:47:58,350 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 02:48:40] 2025-10-13 06:47:58,351 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 02:48:40] 2025-10-13 06:47:58,351 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 02:48:40] 2025-10-13 06:47:58,351 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 02:48:40] 2025-10-13 06:47:58,351 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 02:48:40] 2025-10-13 06:47:58,351 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 02:48:40] 2025-10-13 06:47:58,351 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 02:48:40] 2025-10-13 06:47:58,351 | INFO     | job 6840749280 has completed (purged errors)
[2025-10-13 02:48:40] 2025-10-13 06:47:58,351 | INFO     | overall cleanup function is called
[2025-10-13 02:48:40] 2025-10-13 06:47:59,372 | INFO     | --- collectZombieJob: --- 10, [603603]
[2025-10-13 02:48:40] 2025-10-13 06:47:59,372 | INFO     | zombie collector waiting for pid 603603
[2025-10-13 02:48:40] 2025-10-13 06:47:59,372 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 02:48:40] 2025-10-13 06:47:59,372 | INFO     | collected zombie processes
[2025-10-13 02:48:40] 2025-10-13 06:47:59,373 | INFO     | will attempt to kill all subprocesses of pid=603603
[2025-10-13 02:48:40] 2025-10-13 06:48:00,765 | INFO     | process IDs to be killed: [603603] (in reverse order)
[2025-10-13 02:48:40] 2025-10-13 06:48:01,002 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 02:48:40] 2025-10-13 06:48:01,002 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 02:48:40] 2025-10-13 06:48:01,078 | INFO     | did not find any defunct processes belonging to 603603
[2025-10-13 02:48:40] 2025-10-13 06:48:01,095 | INFO     | did not find any defunct processes belonging to 603603
[2025-10-13 02:48:40] 2025-10-13 06:48:01,095 | INFO     | ready for new job
[2025-10-13 02:48:40] 2025-10-13 06:48:01,095 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 02:48:40] 2025-10-13 06:48:01,097 | INFO     | ***************************************
[2025-10-13 02:48:40] 2025-10-13 06:48:01,100 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 02:48:40] 2025-10-13 06:48:01,100 | INFO     | ***************************************
[2025-10-13 02:48:40] 2025-10-13 06:48:01,100 | INFO     | 
[2025-10-13 02:48:40] 2025-10-13 06:48:01,105 | INFO     | architecture information:
[2025-10-13 02:48:40] 2025-10-13 06:48:01,105 | INFO     | executing command: cat /etc/os-release
[2025-10-13 02:48:40] 2025-10-13 06:48:01,178 | INFO     | cat /etc/os-release:
[2025-10-13 02:48:40] NAME="CentOS Linux"
[2025-10-13 02:48:40] VERSION="7 (Core)"
[2025-10-13 02:48:40] ID="centos"
[2025-10-13 02:48:40] ID_LIKE="rhel fedora"
[2025-10-13 02:48:40] VERSION_ID="7"
[2025-10-13 02:48:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 02:48:40] ANSI_COLOR="0;31"
[2025-10-13 02:48:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 02:48:40] HOME_URL="https://www.centos.org/"
[2025-10-13 02:48:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 02:48:40] 
[2025-10-13 02:48:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 02:48:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 02:48:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 02:48:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 02:48:40] 
[2025-10-13 02:48:40] 2025-10-13 06:48:01,178 | INFO     | ***************************************
[2025-10-13 02:48:40] 2025-10-13 06:48:01,685 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-13 02:48:40] 2025-10-13 06:48:01,736 | INFO     | sufficient remaining disk space (127343263744 B)
[2025-10-13 02:48:40] 2025-10-13 06:48:01,736 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 02:48:40] 2025-10-13 06:48:01,737 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 02:48:40] 2025-10-13 06:48:01,737 | INFO     | update_server=False
[2025-10-13 02:48:40] 2025-10-13 06:48:01,737 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 02:48:40] 2025-10-13 06:48:01,737 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 02:48:40] 2025-10-13 06:48:01,814 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 02:48:40] 2025-10-13 06:48:01,919 | INFO     | all payload control threads have been joined
[2025-10-13 02:48:40] 2025-10-13 06:48:02,062 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 02:48:40] 2025-10-13 06:48:02,062 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 02:48:40] 2025-10-13 06:48:02,063 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 02:48:40] 2025-10-13 06:48:02,063 | INFO     | will abort loop
[2025-10-13 02:48:40] 2025-10-13 06:48:02,220 | INFO     | all data control threads have been joined
[2025-10-13 02:48:40] 2025-10-13 06:48:02,743 | INFO     | [job] retrieve thread has finished
[2025-10-13 02:48:40] 2025-10-13 06:48:02,751 | INFO     | all job control threads have been joined
[2025-10-13 02:48:40] 2025-10-13 06:48:02,870 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 02:48:40] 2025-10-13 06:48:02,925 | INFO     | [payload] control thread has finished
[2025-10-13 02:48:40] 2025-10-13 06:48:03,092 | INFO     | [job] job monitor thread has finished
[2025-10-13 02:48:40] 2025-10-13 06:48:03,226 | INFO     | [data] control thread has finished
[2025-10-13 02:48:40] 2025-10-13 06:48:03,293 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 02:48:40] 2025-10-13 06:48:03,339 | INFO     | [data] copytool_in thread has finished
[2025-10-13 02:48:40] 2025-10-13 06:48:03,342 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 02:48:40] 2025-10-13 06:48:03,581 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 02:48:40] 2025-10-13 06:48:03,701 | INFO     | [payload] validate_post thread has finished
[2025-10-13 02:48:40] 2025-10-13 06:48:03,757 | INFO     | [job] control thread has finished
[2025-10-13 02:48:40] 2025-10-13 06:48:03,821 | INFO     | [data] copytool_out thread has finished
[2025-10-13 02:48:40] 2025-10-13 06:48:03,962 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 02:48:40] 2025-10-13 06:48:04,181 | INFO     | [job] validate thread has finished
[2025-10-13 02:48:40] 2025-10-13 06:48:04,217 | INFO     | [payload] failed_post thread has finished
[2025-10-13 02:48:40] 2025-10-13 06:48:04,299 | INFO     | [job] queue monitor thread has finished
[2025-10-13 02:48:40] 2025-10-13 06:48:05,753 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 02:48:40] 2025-10-13 06:48:30,528 | INFO     | PID=595642 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 02:48:40] 2025-10-13 06:48:30,528 | INFO     | .. there are 30 such processes running
[2025-10-13 02:48:40] 2025-10-13 06:48:30,529 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 02:48:40] 2025-10-13 06:48:30,529 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 02:48:40] 2025-10-13 06:48:30,529 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 02:48:40] 2025-10-13 06:48:30,798 | INFO     | [monitor] cgroup control has ended
[2025-10-13 02:48:40] 2025-10-13 06:48:32,039 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140198362187584)>', '<ExcThread(monitor, started 140198081955584)>']
[2025-10-13 02:48:40] 2025-10-13 06:48:32,540 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 02:48:40] 2025-10-13 06:48:32,540 | INFO     | [monitor] control thread has ended
[2025-10-13 02:48:40] 2025-10-13 06:48:37,064 | INFO     | all workflow threads have been joined
[2025-10-13 02:48:40] 2025-10-13 06:48:37,068 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 02:48:40] 2025-10-13 06:48:37,069 | INFO     | traces error code: 0
[2025-10-13 02:48:40] 2025-10-13 06:48:37,069 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 02:48:40] 2025-10-13 06:48:37,429 [wrapper] ==== pilot stdout END ====
[2025-10-13 02:48:40] 2025-10-13 06:48:37,462 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 02:48:40] 2025-10-13 06:48:37,472 [wrapper] pilotpid: 595642
[2025-10-13 02:48:40] 2025-10-13 06:48:37,475 [wrapper] Pilot exit status: 0
[2025-10-13 02:48:40] 2025-10-13 06:48:37,580 [wrapper] pandaids: 6840749280
[2025-10-13 02:48:40] 2025-10-13 06:48:39,295 [wrapper] cleanup supervisor_pilot 1325774 595643
[2025-10-13 02:48:40] 2025-10-13 06:48:39,347 [wrapper] Test setup, not cleaning
[2025-10-13 02:48:40] 2025-10-13 06:48:39,389 [wrapper] apfmon messages muted
[2025-10-13 02:48:40] 2025-10-13 06:48:39,426 [wrapper] ==== wrapper stdout END ====
[2025-10-13 02:48:40] 2025-10-13 06:48:39,453 [wrapper] ==== wrapper stderr END ====
[2025-10-13 02:48:40]  *** Error codes and diagnostics ***
[2025-10-13 02:48:40]     "exeErrorCode": 0,
[2025-10-13 02:48:40]     "exeErrorDiag": "",
[2025-10-13 02:48:40]     "pilotErrorCode": 0,
[2025-10-13 02:48:40]     "pilotErrorDiag": "",
[2025-10-13 02:48:40]  *** Listing of results directory ***
[2025-10-13 02:48:40] total 416668
[2025-10-13 02:48:40] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 16:23 pilot3.tar.gz
[2025-10-13 02:48:40] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 16:31 queuedata.json
[2025-10-13 02:48:40] -rwx------. 1 boincer umatlas     36292 Oct 12 16:32 runpilot2-wrapper.sh
[2025-10-13 02:48:40] -rw-r--r--. 1 boincer umatlas       100 Oct 12 23:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 02:48:40] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 23:30 run_atlas
[2025-10-13 02:48:40] -rw-r--r--. 1 boincer umatlas       105 Oct 12 23:30 job.xml
[2025-10-13 02:48:40] -rw-r--r--. 2 boincer umatlas 219065403 Oct 12 23:30 EVNT.46676267._004504.pool.root.1
[2025-10-13 02:48:40] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 23:30 start_atlas.sh
[2025-10-13 02:48:40] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 23:30 shared
[2025-10-13 02:48:40] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 23:30 input.tar.gz
[2025-10-13 02:48:40] -rw-r--r--. 1 boincer umatlas         0 Oct 12 23:30 boinc_lockfile
[2025-10-13 02:48:40] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 23:30 pandaJob.out
[2025-10-13 02:48:40] -rw-------. 1 boincer umatlas    974373 Oct 12 23:31 agis_schedconf.cvmfs.json
[2025-10-13 02:48:40] drwx------. 5 boincer umatlas      4096 Oct 12 23:31 pilot3
[2025-10-13 02:48:40] -rw-r--r--. 1 boincer umatlas      6946 Oct 13 02:38 init_data.xml
[2025-10-13 02:48:40] -rw-------. 1 boincer umatlas 199566198 Oct 13 02:45 HITS.46676269._088801.pool.root.1
[2025-10-13 02:48:40] -rw-r--r--. 1 boincer umatlas       529 Oct 13 02:45 boinc_task_state.xml
[2025-10-13 02:48:40] -rw-------. 1 boincer umatlas      1047 Oct 13 02:47 memory_monitor_summary.json
[2025-10-13 02:48:40] -rw-------. 1 boincer umatlas   1560580 Oct 13 02:47 agis_ddmendpoints.agis.ALL.json
[2025-10-13 02:48:40] -rw-------. 1 boincer umatlas    436201 Oct 13 02:47 log.46676269._088801.job.log.tgz.1
[2025-10-13 02:48:40] -rw-------. 1 boincer umatlas      7804 Oct 13 02:47 heartbeat.json
[2025-10-13 02:48:40] -rw-------. 1 boincer umatlas        95 Oct 13 02:48 pilot_heartbeat.json
[2025-10-13 02:48:40] -rw-------. 1 boincer umatlas      5010 Oct 13 02:48 pilotlog.txt
[2025-10-13 02:48:40] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 02:48 boinc_mmap_file
[2025-10-13 02:48:40] -rw-------. 1 boincer umatlas   1633855 Oct 13 02:48 log.46676269._088801.job.log.1
[2025-10-13 02:48:40] -rw-r--r--. 1 boincer umatlas        27 Oct 13 02:48 wrapper_checkpoint.txt
[2025-10-13 02:48:40] -rw-------. 1 boincer umatlas       357 Oct 13 02:48 output.list
[2025-10-13 02:48:40] -rw-r--r--. 1 boincer umatlas       620 Oct 13 02:48 runtime_log
[2025-10-13 02:48:40] -rw-------. 1 boincer umatlas   2088960 Oct 13 02:48 result.tar.gz
[2025-10-13 02:48:40] -rw-r--r--. 1 boincer umatlas      8704 Oct 13 02:48 runtime_log.err
[2025-10-13 02:48:40] -rw-------. 1 boincer umatlas       660 Oct 13 02:48 oBfLDmouHS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmbxUMDm7h5p5m.diag
[2025-10-13 02:48:40] -rw-r--r--. 1 boincer umatlas     21003 Oct 13 02:48 stderr.txt
[2025-10-13 02:48:40] HITS file was successfully produced:
[2025-10-13 02:48:40] -rw-------. 1 boincer umatlas 199566198 Oct 13 02:45 shared/HITS.pool.root.1
[2025-10-13 02:48:40]  *** Contents of shared directory: ***
[2025-10-13 02:48:40] total 411444
[2025-10-13 02:48:40] -rw-r--r--. 2 boincer umatlas 219065403 Oct 12 23:30 ATLAS.root_0
[2025-10-13 02:48:40] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 23:30 start_atlas.sh
[2025-10-13 02:48:40] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 23:30 input.tar.gz
[2025-10-13 02:48:40] -rw-------. 1 boincer umatlas 199566198 Oct 13 02:45 HITS.pool.root.1
[2025-10-13 02:48:40] -rw-------. 1 boincer umatlas   2088960 Oct 13 02:48 result.tar.gz
02:49:01 (591886): run_atlas exited; CPU time 36492.353584
02:49:01 (591886): called boinc_finish(0)

</stderr_txt>
]]>

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