Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:47:51 (7678): wrapper (7.7.26015): starting
09:47:51 (7678): wrapper: running run_atlas (--nthreads 8)
[2025-10-14 09:47:51] Arguments: --nthreads 8
[2025-10-14 09:47:51] Threads: 8
[2025-10-14 09:47:51] Checking for CVMFS
[2025-10-14 09:47:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 09:47:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 09:47:52] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 09:47:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 09:47:53] 2.11.2.0 9336 20243 71052 151689 0 60 22835604 25165824 4632 130560 0 6097470 99.947 2171852 1518 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-14 09:47:53] CVMFS is ok
[2025-10-14 09:47:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 09:47:53] Checking for apptainer binary...
[2025-10-14 09:47:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 09:47:53] Running /usr/bin/apptainer --version
[2025-10-14 09:47:53] apptainer version 1.3.2-1.el7
[2025-10-14 09:47:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 09:48:15] cg-vwn413.simple-grid.lan
[2025-10-14 09:48:15] apptainer works
[2025-10-14 09:48:15] Set ATHENA_PROC_NUMBER=8
[2025-10-14 09:48:15] Set ATHENA_CORE_NUMBER=8
[2025-10-14 09:48:15] Starting ATLAS job with PandaID=6840850987
[2025-10-14 09:48:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 13:39:25]  *** The last 200 lines of the pilot log: ***
[2025-10-14 13:39:25] 2025-10-14 11:38:51,298 | INFO     | sum of deviations: 16453764423.0
[2025-10-14 13:39:25] 2025-10-14 11:38:51,298 | INFO     | mean x: 1760435482.0
[2025-10-14 13:39:25] 2025-10-14 11:38:51,299 | INFO     | mean y: 2492598.142180095
[2025-10-14 13:39:25] 2025-10-14 11:38:51,299 | INFO     | -- intersect: -9941696021.909403
[2025-10-14 13:39:25] 2025-10-14 11:38:51,299 | INFO     | intersect: -9941696021.909403
[2025-10-14 13:39:25] 2025-10-14 11:38:51,299 | INFO     | chi2: 0.4786322600336918
[2025-10-14 13:39:25] 2025-10-14 11:38:51,299 | INFO     | current chi2=0.4786322600336918 (change=90.47989802555965 %)
[2025-10-14 13:39:25] 2025-10-14 11:38:51,299 | INFO     | sum of square deviations: 2710627567.5
[2025-10-14 13:39:25] 2025-10-14 11:38:51,301 | INFO     | sum of deviations: -100494724.49999961
[2025-10-14 13:39:25] 2025-10-14 11:38:51,301 | INFO     | mean x: 1760435634.5
[2025-10-14 13:39:25] 2025-10-14 11:38:51,301 | INFO     | mean y: 2504936.199029126
[2025-10-14 13:39:25] 2025-10-14 11:38:51,301 | INFO     | -- intersect: 67771923.1544621
[2025-10-14 13:39:25] 2025-10-14 11:38:51,301 | INFO     | intersect: 67771923.1544621
[2025-10-14 13:39:25] 2025-10-14 11:38:51,301 | INFO     | chi2: 0.05063513968650864
[2025-10-14 13:39:25] 2025-10-14 11:38:51,302 | INFO     | current chi2=0.05063513968650864 (change=89.42086776955979 %)
[2025-10-14 13:39:25] 2025-10-14 11:38:51,302 | INFO     | sum of square deviations: 2518000700.0
[2025-10-14 13:39:25] 2025-10-14 11:38:51,303 | INFO     | sum of deviations: 4431251792.0
[2025-10-14 13:39:25] 2025-10-14 11:38:51,303 | INFO     | mean x: 1760435787.0
[2025-10-14 13:39:25] 2025-10-14 11:38:51,303 | INFO     | mean y: 2501316.5174129354
[2025-10-14 13:39:25] 2025-10-14 11:38:51,303 | INFO     | -- intersect: -3095565429.7883687
[2025-10-14 13:39:25] 2025-10-14 11:38:51,303 | INFO     | intersect: -3095565429.7883687
[2025-10-14 13:39:25] 2025-10-14 11:38:51,304 | INFO     | chi2: 0.021633329911513916
[2025-10-14 13:39:25] 2025-10-14 11:38:51,304 | INFO     | current chi2=0.021633329911513916 (change=57.27605365473504 %)
[2025-10-14 13:39:25] 2025-10-14 11:38:51,304 | INFO     | sum of square deviations: 2334722845.0
[2025-10-14 13:39:25] 2025-10-14 11:38:51,305 | INFO     | sum of deviations: 6393173136.999999
[2025-10-14 13:39:25] 2025-10-14 11:38:51,306 | INFO     | mean x: 1760435939.5
[2025-10-14 13:39:25] 2025-10-14 11:38:51,306 | INFO     | mean y: 2499726.724489796
[2025-10-14 13:39:25] 2025-10-14 11:38:51,306 | INFO     | -- intersect: -4818103190.62982
[2025-10-14 13:39:25] 2025-10-14 11:38:51,306 | INFO     | intersect: -4818103190.62982
[2025-10-14 13:39:25] 2025-10-14 11:38:51,306 | INFO     | chi2: 0.0007812978903664181
[2025-10-14 13:39:25] 2025-10-14 11:38:51,306 | INFO     | current chi2=0.0007812978903664181 (change=96.38845294015238 %)
[2025-10-14 13:39:25] 2025-10-14 11:38:51,306 | INFO     | sum of square deviations: 2160561440.0
[2025-10-14 13:39:25] 2025-10-14 11:38:51,308 | INFO     | sum of deviations: 5533662763.0
[2025-10-14 13:39:25] 2025-10-14 11:38:51,308 | INFO     | mean x: 1760436092.0
[2025-10-14 13:39:25] 2025-10-14 11:38:51,308 | INFO     | mean y: 2500478.5287958113
[2025-10-14 13:39:25] 2025-10-14 11:38:51,308 | INFO     | -- intersect: -4506355168.243111
[2025-10-14 13:39:25] 2025-10-14 11:38:51,308 | INFO     | intersect: -4506355168.243111
[2025-10-14 13:39:25] 2025-10-14 11:38:51,308 | INFO     | chi2: 0.0006306126316582793
[2025-10-14 13:39:25] 2025-10-14 11:38:51,308 | INFO     | current chi2=0.0006306126316582793 (change=19.2865308566838 %)
[2025-10-14 13:39:25] 2025-10-14 11:38:51,308 | INFO     | left removable region: 50
[2025-10-14 13:39:25] 2025-10-14 11:38:51,309 | INFO     | sum of square deviations: 1270051720.0
[2025-10-14 13:39:25] 2025-10-14 11:38:51,310 | INFO     | sum of deviations: 2520092481.5
[2025-10-14 13:39:25] 2025-10-14 11:38:51,310 | INFO     | mean x: 1760436671.5
[2025-10-14 13:39:25] 2025-10-14 11:38:51,310 | INFO     | mean y: 2502792.74375
[2025-10-14 13:39:25] 2025-10-14 11:38:51,310 | INFO     | -- intersect: -3490633077.348245
[2025-10-14 13:39:25] 2025-10-14 11:38:51,310 | INFO     | intersect: -3490633077.348245
[2025-10-14 13:39:25] 2025-10-14 11:38:51,310 | INFO     | chi2: 0.0002816507726143252
[2025-10-14 13:39:25] 2025-10-14 11:38:51,311 | INFO     | -- intersect: -3490633077.348245
[2025-10-14 13:39:25] 2025-10-14 11:38:51,311 | INFO     | current memory leak: 1.98 B/s (using 160 data points, chi2=0.00)
[2025-10-14 13:39:25] 2025-10-14 11:38:51,311 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-14 13:39:25] 2025-10-14 11:38:51,311 | INFO     | ..............................
[2025-10-14 13:39:25] 2025-10-14 11:38:51,311 | INFO     | . Timing measurements:
[2025-10-14 13:39:25] 2025-10-14 11:38:51,312 | INFO     | . get job = 0 s
[2025-10-14 13:39:25] 2025-10-14 11:38:51,312 | INFO     | . initial setup = 5 s
[2025-10-14 13:39:25] 2025-10-14 11:38:51,312 | INFO     | . payload setup = 122 s
[2025-10-14 13:39:25] 2025-10-14 11:38:51,312 | INFO     | . stage-in = 0 s
[2025-10-14 13:39:25] 2025-10-14 11:38:51,312 | INFO     | . payload execution = 13306 s
[2025-10-14 13:39:25] 2025-10-14 11:38:51,312 | INFO     | . stage-out = 1 s
[2025-10-14 13:39:25] 2025-10-14 11:38:51,312 | INFO     | . log creation = 0 s
[2025-10-14 13:39:25] 2025-10-14 11:38:51,312 | INFO     | ..............................
[2025-10-14 13:39:25] 2025-10-14 11:38:51,487 | INFO     | time since job start (13631s) is within the limit (172800.0s)
[2025-10-14 13:39:25] 2025-10-14 11:38:51,726 | INFO     | 
[2025-10-14 13:39:25] 2025-10-14 11:38:51,727 | INFO     | job summary report
[2025-10-14 13:39:25] 2025-10-14 11:38:51,727 | INFO     | --------------------------------------------------
[2025-10-14 13:39:25] 2025-10-14 11:38:51,727 | INFO     | PanDA job id: 6840850987
[2025-10-14 13:39:25] 2025-10-14 11:38:51,727 | INFO     | task id: 46676269
[2025-10-14 13:39:25] 2025-10-14 11:38:51,727 | INFO     | errors: (none)
[2025-10-14 13:39:25] 2025-10-14 11:38:51,727 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 13:39:25] 2025-10-14 11:38:51,727 | INFO     | pilot state: finished 
[2025-10-14 13:39:25] 2025-10-14 11:38:51,727 | INFO     | transexitcode: 0
[2025-10-14 13:39:25] 2025-10-14 11:38:51,728 | INFO     | exeerrorcode: 0
[2025-10-14 13:39:25] 2025-10-14 11:38:51,728 | INFO     | exeerrordiag: 
[2025-10-14 13:39:25] 2025-10-14 11:38:51,728 | INFO     | exitcode: 0
[2025-10-14 13:39:25] 2025-10-14 11:38:51,728 | INFO     | exitmsg: OK
[2025-10-14 13:39:25] 2025-10-14 11:38:51,728 | INFO     | cpuconsumptiontime: 49978 s
[2025-10-14 13:39:25] 2025-10-14 11:38:51,728 | INFO     | nevents: 400
[2025-10-14 13:39:25] 2025-10-14 11:38:51,728 | INFO     | neventsw: 0
[2025-10-14 13:39:25] 2025-10-14 11:38:51,728 | INFO     | pid: 18037
[2025-10-14 13:39:25] 2025-10-14 11:38:51,728 | INFO     | pgrp: 18037
[2025-10-14 13:39:25] 2025-10-14 11:38:51,728 | INFO     | corecount: 8
[2025-10-14 13:39:25] 2025-10-14 11:38:51,728 | INFO     | event service: False
[2025-10-14 13:39:25] 2025-10-14 11:38:51,729 | INFO     | sizes: {0: 2348631, 1: 2348886, 2: 2348886, 12: 2348914, 23: 2348942, 34: 2348970, 44: 2349126, 55: 2349154, 66: 2349182, 77: 2349210, 87: 2349266, 91: 2349836, 98
[2025-10-14 13:39:25] 2025-10-14 11:38:51,729 | INFO     | --------------------------------------------------
[2025-10-14 13:39:25] 2025-10-14 11:38:51,729 | INFO     | 
[2025-10-14 13:39:25] 2025-10-14 11:38:51,729 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-10-14 13:39:25] 2025-10-14 11:38:51,759 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 13:39:25] 2025-10-14 11:38:51,759 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 13:39:25] 2025-10-14 11:38:51,759 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 13:39:25] 2025-10-14 11:38:51,759 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 13:39:25] 2025-10-14 11:38:51,759 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 13:39:25] 2025-10-14 11:38:51,759 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 13:39:25] 2025-10-14 11:38:51,760 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 13:39:25] 2025-10-14 11:38:51,760 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 13:39:25] 2025-10-14 11:38:51,760 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 13:39:25] 2025-10-14 11:38:51,760 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 13:39:25] 2025-10-14 11:38:51,760 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 13:39:25] 2025-10-14 11:38:51,760 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 13:39:25] 2025-10-14 11:38:51,760 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 13:39:25] 2025-10-14 11:38:51,760 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 13:39:25] 2025-10-14 11:38:51,760 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 13:39:25] 2025-10-14 11:38:51,760 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 13:39:25] 2025-10-14 11:38:51,760 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 13:39:25] 2025-10-14 11:38:51,760 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 13:39:25] 2025-10-14 11:38:51,760 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 13:39:25] 2025-10-14 11:38:51,761 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 13:39:25] 2025-10-14 11:38:51,761 | INFO     | job 6840850987 has completed (purged errors)
[2025-10-14 13:39:25] 2025-10-14 11:38:51,761 | INFO     | overall cleanup function is called
[2025-10-14 13:39:25] 2025-10-14 11:38:52,767 | INFO     | --- collectZombieJob: --- 10, [18037]
[2025-10-14 13:39:25] 2025-10-14 11:38:52,768 | INFO     | zombie collector waiting for pid 18037
[2025-10-14 13:39:25] 2025-10-14 11:38:52,768 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 13:39:25] 2025-10-14 11:38:52,768 | INFO     | collected zombie processes
[2025-10-14 13:39:25] 2025-10-14 11:38:52,768 | INFO     | will attempt to kill all subprocesses of pid=18037
[2025-10-14 13:39:25] 2025-10-14 11:38:52,862 | INFO     | process IDs to be killed: [18037] (in reverse order)
[2025-10-14 13:39:25] 2025-10-14 11:38:52,990 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 13:39:25] 2025-10-14 11:38:52,990 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 13:39:25] 2025-10-14 11:38:52,993 | INFO     | did not find any defunct processes belonging to 18037
[2025-10-14 13:39:25] 2025-10-14 11:38:52,996 | INFO     | did not find any defunct processes belonging to 18037
[2025-10-14 13:39:25] 2025-10-14 11:38:52,996 | INFO     | ready for new job
[2025-10-14 13:39:25] 2025-10-14 11:38:52,996 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 13:39:25] 2025-10-14 11:38:52,998 | INFO     | ***************************************
[2025-10-14 13:39:25] 2025-10-14 11:38:52,998 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 13:39:25] 2025-10-14 11:38:52,998 | INFO     | ***************************************
[2025-10-14 13:39:25] 2025-10-14 11:38:52,998 | INFO     | 
[2025-10-14 13:39:25] 2025-10-14 11:38:52,999 | INFO     | pilot is running in a VM
[2025-10-14 13:39:25] 2025-10-14 11:38:52,999 | INFO     | architecture information:
[2025-10-14 13:39:25] 2025-10-14 11:38:53,002 | INFO     | executing command: cat /etc/os-release
[2025-10-14 13:39:25] 2025-10-14 11:38:53,139 | INFO     | cat /etc/os-release:
[2025-10-14 13:39:25] NAME="CentOS Linux"
[2025-10-14 13:39:25] VERSION="7 (Core)"
[2025-10-14 13:39:25] ID="centos"
[2025-10-14 13:39:25] ID_LIKE="rhel fedora"
[2025-10-14 13:39:25] VERSION_ID="7"
[2025-10-14 13:39:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 13:39:25] ANSI_COLOR="0;31"
[2025-10-14 13:39:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 13:39:25] HOME_URL="https://www.centos.org/"
[2025-10-14 13:39:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 13:39:25] 
[2025-10-14 13:39:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 13:39:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 13:39:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 13:39:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 13:39:25] 
[2025-10-14 13:39:25] 2025-10-14 11:38:53,140 | INFO     | ***************************************
[2025-10-14 13:39:25] 2025-10-14 11:38:53,641 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-10-14 13:39:25] 2025-10-14 11:38:53,810 | INFO     | sufficient remaining disk space (496466132992 B)
[2025-10-14 13:39:25] 2025-10-14 11:38:53,810 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 13:39:25] 2025-10-14 11:38:53,810 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 13:39:25] 2025-10-14 11:38:53,810 | INFO     | update_server=False
[2025-10-14 13:39:25] 2025-10-14 11:38:53,811 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 13:39:25] 2025-10-14 11:38:53,937 | INFO     | all data control threads have been joined
[2025-10-14 13:39:25] 2025-10-14 11:38:54,061 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-14 13:39:25] 2025-10-14 11:38:54,062 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-14 13:39:25] 2025-10-14 11:38:54,062 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 13:39:25] 2025-10-14 11:38:54,062 | INFO     | will abort loop
[2025-10-14 13:39:25] 2025-10-14 11:38:54,071 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 13:39:25] 2025-10-14 11:38:54,621 | INFO     | all payload control threads have been joined
[2025-10-14 13:39:25] 2025-10-14 11:38:54,816 | INFO     | [job] retrieve thread has finished
[2025-10-14 13:39:25] 2025-10-14 11:38:54,940 | INFO     | [data] control thread has finished
[2025-10-14 13:39:25] 2025-10-14 11:38:55,009 | INFO     | [job] validate thread has finished
[2025-10-14 13:39:25] 2025-10-14 11:38:55,044 | INFO     | [payload] validate_post thread has finished
[2025-10-14 13:39:25] 2025-10-14 11:38:55,067 | INFO     | [job] job monitor thread has finished
[2025-10-14 13:39:25] 2025-10-14 11:38:55,191 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 13:39:25] 2025-10-14 11:38:55,193 | INFO     | all job control threads have been joined
[2025-10-14 13:39:25] 2025-10-14 11:38:55,445 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 13:39:25] 2025-10-14 11:38:55,626 | INFO     | [payload] control thread has finished
[2025-10-14 13:39:25] 2025-10-14 11:38:55,674 | INFO     | [data] copytool_in thread has finished
[2025-10-14 13:39:25] 2025-10-14 11:38:55,807 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 13:39:25] 2025-10-14 11:38:56,077 | INFO     | [data] copytool_out thread has finished
[2025-10-14 13:39:25] 2025-10-14 11:38:56,134 | INFO     | [payload] failed_post thread has finished
[2025-10-14 13:39:25] 2025-10-14 11:38:56,198 | INFO     | [job] control thread has finished
[2025-10-14 13:39:25] 2025-10-14 11:38:56,425 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 13:39:25] 2025-10-14 11:38:56,680 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 13:39:25] 2025-10-14 11:38:57,427 | INFO     | [job] queue monitor thread has finished
[2025-10-14 13:39:25] 2025-10-14 11:39:00,687 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 13:39:25] 2025-10-14 11:39:02,964 | INFO     | [monitor] cgroup control has ended
[2025-10-14 13:39:25] 2025-10-14 11:39:04,118 | INFO     | job.realtimelogging is not enabled
[2025-10-14 13:39:25] 2025-10-14 11:39:05,123 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 13:39:25] 2025-10-14 11:39:06,837 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139990710396736)>', '<ExcThread(monitor, started 139990273083136)>']
[2025-10-14 13:39:25] 2025-10-14 11:39:11,863 | INFO     | all workflow threads have been joined
[2025-10-14 13:39:25] 2025-10-14 11:39:11,864 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 13:39:25] 2025-10-14 11:39:11,864 | INFO     | traces error code: 0
[2025-10-14 13:39:25] 2025-10-14 11:39:11,864 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 13:39:25] 2025-10-14 11:39:24,664 | INFO     | PID=11502 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-14 13:39:25] 2025-10-14 11:39:24,664 | INFO     | .. there are 9 such processes running
[2025-10-14 13:39:25] 2025-10-14 11:39:24,664 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 13:39:25] 2025-10-14 11:39:24,664 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 13:39:25] 2025-10-14 11:39:24,664 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 13:39:25] 2025-10-14 11:39:24,664 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 13:39:25] 2025-10-14 11:39:24,665 | INFO     | [monitor] control thread has ended
[2025-10-14 13:39:25] 2025-10-14 11:39:24,821 [wrapper] ==== pilot stdout END ====
[2025-10-14 13:39:25] 2025-10-14 11:39:24,824 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 13:39:25] 2025-10-14 11:39:24,827 [wrapper] pilotpid: 11502
[2025-10-14 13:39:25] 2025-10-14 11:39:24,830 [wrapper] Pilot exit status: 0
[2025-10-14 13:39:25] 2025-10-14 11:39:24,844 [wrapper] pandaids: 6840850987
[2025-10-14 13:39:25] 2025-10-14 11:39:24,876 [wrapper] cleanup supervisor_pilot  9789 11503
[2025-10-14 13:39:25] 2025-10-14 11:39:24,880 [wrapper] Test setup, not cleaning
[2025-10-14 13:39:25] 2025-10-14 11:39:24,883 [wrapper] apfmon messages muted
[2025-10-14 13:39:25] 2025-10-14 11:39:24,886 [wrapper] ==== wrapper stdout END ====
[2025-10-14 13:39:25] 2025-10-14 11:39:24,890 [wrapper] ==== wrapper stderr END ====
[2025-10-14 13:39:25]  *** Error codes and diagnostics ***
[2025-10-14 13:39:25]     "exeErrorCode": 0,
[2025-10-14 13:39:25]     "exeErrorDiag": "",
[2025-10-14 13:39:25]     "pilotErrorCode": 0,
[2025-10-14 13:39:25]     "pilotErrorDiag": "",
[2025-10-14 13:39:25]  *** Listing of results directory ***
[2025-10-14 13:39:25] total 421588
[2025-10-14 13:39:25] -rw-r--r--. 1 boinc boinc    557409 Oct 12 23:57 pilot3.tar.gz
[2025-10-14 13:39:25] -rw-r--r--. 1 boinc boinc      5112 Oct 13 00:20 queuedata.json
[2025-10-14 13:39:25] -rwx------. 1 boinc boinc     36292 Oct 13 00:20 runpilot2-wrapper.sh
[2025-10-14 13:39:25] -rw-r--r--. 1 boinc boinc       100 Oct 14 09:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 13:39:25] -rwxr-xr-x. 1 boinc boinc      7986 Oct 14 09:47 run_atlas
[2025-10-14 13:39:25] -rw-r--r--. 1 boinc boinc       105 Oct 14 09:47 job.xml
[2025-10-14 13:39:25] -rw-r--r--. 1 boinc boinc      6389 Oct 14 09:47 init_data.xml
[2025-10-14 13:39:25] -rw-r--r--. 2 boinc boinc 222834113 Oct 14 09:47 EVNT.46676267._004609.pool.root.1
[2025-10-14 13:39:25] -rw-r--r--. 2 boinc boinc     15120 Oct 14 09:47 start_atlas.sh
[2025-10-14 13:39:25] drwxrwx--x. 2 boinc boinc        68 Oct 14 09:47 shared
[2025-10-14 13:39:25] -rw-r--r--. 2 boinc boinc    569678 Oct 14 09:47 input.tar.gz
[2025-10-14 13:39:25] -rw-r--r--. 1 boinc boinc         0 Oct 14 09:47 boinc_lockfile
[2025-10-14 13:39:25] -rw-r--r--. 1 boinc boinc      2550 Oct 14 09:48 pandaJob.out
[2025-10-14 13:39:25] -rw-------. 1 boinc boinc    972807 Oct 14 09:51 agis_schedconf.cvmfs.json
[2025-10-14 13:39:25] drwx------. 5 boinc boinc      4096 Oct 14 09:51 pilot3
[2025-10-14 13:39:25] -rw-------. 1 boinc boinc 200421716 Oct 14 13:38 HITS.46676269._090935.pool.root.1
[2025-10-14 13:39:25] -rw-r--r--. 1 boinc boinc       531 Oct 14 13:38 boinc_task_state.xml
[2025-10-14 13:39:25] -rw-------. 1 boinc boinc        95 Oct 14 13:38 pilot_heartbeat.json
[2025-10-14 13:39:25] -rw-------. 1 boinc boinc      1013 Oct 14 13:38 memory_monitor_summary.json
[2025-10-14 13:39:25] -rw-------. 1 boinc boinc   1560580 Oct 14 13:38 agis_ddmendpoints.agis.ALL.json
[2025-10-14 13:39:25] -rw-------. 1 boinc boinc    440792 Oct 14 13:38 log.46676269._090935.job.log.tgz.1
[2025-10-14 13:39:25] -rw-------. 1 boinc boinc      7775 Oct 14 13:38 heartbeat.json
[2025-10-14 13:39:25] -rw-r--r--. 1 boinc boinc      8192 Oct 14 13:39 boinc_mmap_file
[2025-10-14 13:39:25] -rw-r--r--. 1 boinc boinc        28 Oct 14 13:39 wrapper_checkpoint.txt
[2025-10-14 13:39:25] -rw-------. 1 boinc boinc       820 Oct 14 13:39 pilotlog.txt
[2025-10-14 13:39:25] -rw-------. 1 boinc boinc   1840499 Oct 14 13:39 log.46676269._090935.job.log.1
[2025-10-14 13:39:25] -rw-------. 1 boinc boinc       357 Oct 14 13:39 output.list
[2025-10-14 13:39:25] -rw-r--r--. 1 boinc boinc       620 Oct 14 13:39 runtime_log
[2025-10-14 13:39:25] -rw-------. 1 boinc boinc   2304000 Oct 14 13:39 result.tar.gz
[2025-10-14 13:39:25] -rw-r--r--. 1 boinc boinc      8717 Oct 14 13:39 runtime_log.err
[2025-10-14 13:39:25] -rw-------. 1 boinc boinc       656 Oct 14 13:39 j72NDmgbJS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmx9UMDmRj9zVm.diag
[2025-10-14 13:39:25] -rw-r--r--. 1 boinc boinc     20700 Oct 14 13:39 stderr.txt
[2025-10-14 13:39:25] HITS file was successfully produced:
[2025-10-14 13:39:25] -rw-------. 1 boinc boinc 200421716 Oct 14 13:38 shared/HITS.pool.root.1
[2025-10-14 13:39:25]  *** Contents of shared directory: ***
[2025-10-14 13:39:25] total 416168
[2025-10-14 13:39:25] -rw-r--r--. 2 boinc boinc 222834113 Oct 14 09:47 ATLAS.root_0
[2025-10-14 13:39:25] -rw-r--r--. 2 boinc boinc     15120 Oct 14 09:47 start_atlas.sh
[2025-10-14 13:39:25] -rw-r--r--. 2 boinc boinc    569678 Oct 14 09:47 input.tar.gz
[2025-10-14 13:39:25] -rw-------. 1 boinc boinc 200421716 Oct 14 13:38 HITS.pool.root.1
[2025-10-14 13:39:25] -rw-------. 1 boinc boinc   2304000 Oct 14 13:39 result.tar.gz
13:39:26 (7678): run_atlas exited; CPU time 50128.651328
13:39:26 (7678): called boinc_finish(0)

</stderr_txt>
]]>

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