Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:54:46 (3413747): wrapper (7.7.26015): starting
14:54:46 (3413747): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 14:54:46] Arguments: --nthreads 3
[2025-10-13 14:54:46] Threads: 3
[2025-10-13 14:54:46] Checking for CVMFS
[2025-10-13 14:54:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 14:54:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 14:54:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 14:54:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 14:54:46] 2.9.2.0 233307 5813 67612 151661 1 57 3086122 36864001 0 130560 0 4253194 99.990 197137 842 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 14:54:46] CVMFS is ok
[2025-10-13 14:54:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 14:54:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 14:54:46] Further information can be found at the LHC@home message board.
[2025-10-13 14:54:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 14:54:46] Checking for apptainer binary...
[2025-10-13 14:54:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 14:54:46] Running /usr/bin/apptainer --version
[2025-10-13 14:54:47] apptainer version 1.4.1-1.1
[2025-10-13 14:54:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 14:54:47] atlasA221b
[2025-10-13 14:54:47] apptainer works
[2025-10-13 14:54:47] Set ATHENA_PROC_NUMBER=3
[2025-10-13 14:54:47] Set ATHENA_CORE_NUMBER=3
[2025-10-13 14:54:47] Starting ATLAS job with PandaID=6840851927
[2025-10-13 14:54:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 16:32:35]  *** The last 200 lines of the pilot log: ***
[2025-10-13 16:32:35] 2025-10-13 14:32:04,412 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 16:32:35] 2025-10-13 14:32:04,739 | INFO     | all job control threads have been joined
[2025-10-13 16:32:35] 2025-10-13 14:32:05,389 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:32:35] 2025-10-13 14:32:05,389 | INFO     | aborting loop
[2025-10-13 16:32:35] 2025-10-13 14:32:05,417 | INFO     | [job] queue monitor thread has finished
[2025-10-13 16:32:35] 2025-10-13 14:32:05,417 | INFO     | [job] retrieve thread has finished
[2025-10-13 16:32:35] 2025-10-13 14:32:05,472 | INFO     | [monitor] cgroup control has ended
[2025-10-13 16:32:35] 2025-10-13 14:32:05,485 | INFO     | all data control threads have been joined
[2025-10-13 16:32:35] 2025-10-13 14:32:05,541 | INFO     | [data] copytool_in thread has finished
[2025-10-13 16:32:35] 2025-10-13 14:32:05,744 | INFO     | [job] control thread has finished
[2025-10-13 16:32:35] 2025-10-13 14:32:05,777 | INFO     | all payload control threads have been joined
[2025-10-13 16:32:35] 2025-10-13 14:32:06,102 | INFO     | [payload] validate_post thread has finished
[2025-10-13 16:32:35] 2025-10-13 14:32:06,178 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 16:32:35] 2025-10-13 14:32:06,360 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 16:32:35] 2025-10-13 14:32:06,395 | INFO     | [job] job monitor thread has finished
[2025-10-13 16:32:35] 2025-10-13 14:32:06,418 | INFO     | [data] copytool_out thread has finished
[2025-10-13 16:32:35] 2025-10-13 14:32:06,490 | INFO     | [data] control thread has finished
[2025-10-13 16:32:35] 2025-10-13 14:32:06,508 | INFO     | [job] validate thread has finished
[2025-10-13 16:32:35] 2025-10-13 14:32:06,581 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 16:32:35] 2025-10-13 14:32:06,593 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 16:32:35] 2025-10-13 14:32:06,781 | INFO     | [payload] failed_post thread has finished
[2025-10-13 16:32:35] 2025-10-13 14:32:06,782 | INFO     | [payload] control thread has finished
[2025-10-13 16:32:35] 2025-10-13 14:32:06,784 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 16:32:35] 2025-10-13 14:32:10,364 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 16:32:35] 2025-10-13 14:32:11,719 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139665756157760)>', '<ExcThread(monitor, started 139665239676672)>']
[2025-10-13 16:32:35] 2025-10-13 14:32:16,744 | INFO     | all workflow threads have been joined
[2025-10-13 16:32:35] 2025-10-13 14:32:16,744 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 16:32:35] 2025-10-13 14:32:16,745 | INFO     | traces error code: 0
[2025-10-13 16:32:35] 2025-10-13 14:32:16,745 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 16:32:35] 2025-10-13 14:32:35,513 | INFO     | PID=3417490 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 16:32:35] 2025-10-13 14:32:35,514 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 16:32:35] 2025-10-13 14:32:35,514 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 16:32:35] 2025-10-13 14:32:35,514 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 16:32:35] 2025-10-13 14:32:35,514 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 16:32:35] 2025-10-13 14:32:35,514 | INFO     | [monitor] control thread has ended
[2025-10-13 16:32:35] 2025-10-13 14:32:35,561 [wrapper] ==== pilot stdout END ====
[2025-10-13 16:32:35] 2025-10-13 14:32:35,564 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 16:32:35] 2025-10-13 14:32:35,567 [wrapper] pilotpid: 3417490
[2025-10-13 16:32:35] 2025-10-13 14:32:35,570 [wrapper] Pilot exit status: 0
[2025-10-13 16:32:35] 2025-10-13 14:32:35,578 [wrapper] pandaids: 6840851927
[2025-10-13 16:32:35] 2025-10-13 14:32:35,597 [wrapper] cleanup supervisor_pilot 3448165 3417491
[2025-10-13 16:32:35] 2025-10-13 14:32:35,600 [wrapper] Test setup, not cleaning
[2025-10-13 16:32:35] 2025-10-13 14:32:35,602 [wrapper] apfmon messages muted
[2025-10-13 16:32:35] 2025-10-13 14:32:35,605 [wrapper] ==== wrapper stdout END ====
[2025-10-13 16:32:35] 2025-10-13 14:32:35,607 [wrapper] ==== wrapper stderr END ====
[2025-10-13 16:32:35]  *** Error codes and diagnostics ***
[2025-10-13 16:32:35]     "exeErrorCode": 0,
[2025-10-13 16:32:35]     "exeErrorDiag": "",
[2025-10-13 16:32:35]     "pilotErrorCode": 0,
[2025-10-13 16:32:35]     "pilotErrorDiag": "",
[2025-10-13 16:32:35]  *** Listing of results directory ***
[2025-10-13 16:32:35] total 420380
[2025-10-13 16:32:35] -rw-r--r-- 1 boinc boinc    557409 Oct 12 23:57 pilot3.tar.gz
[2025-10-13 16:32:35] -rw-r--r-- 1 boinc boinc      5112 Oct 13 00:28 queuedata.json
[2025-10-13 16:32:35] -rwx------ 1 boinc boinc     36292 Oct 13 00:29 runpilot2-wrapper.sh
[2025-10-13 16:32:35] -rw-r--r-- 1 boinc boinc       100 Oct 13 14:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 16:32:35] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 14:54 run_atlas
[2025-10-13 16:32:35] -rw-r--r-- 1 boinc boinc       105 Oct 13 14:54 job.xml
[2025-10-13 16:32:35] -rw-r--r-- 2 boinc boinc 221605548 Oct 13 14:54 EVNT.46676267._004616.pool.root.1
[2025-10-13 16:32:35] -rw-r--r-- 2 boinc boinc    569682 Oct 13 14:54 input.tar.gz
[2025-10-13 16:32:35] -rw-r--r-- 2 boinc boinc     15120 Oct 13 14:54 start_atlas.sh
[2025-10-13 16:32:35] drwxrwx--x 2 boinc boinc      4096 Oct 13 14:54 shared
[2025-10-13 16:32:35] -rw-r--r-- 1 boinc boinc         0 Oct 13 14:54 boinc_setup_complete
[2025-10-13 16:32:35] -rw-r--r-- 1 boinc boinc      6197 Oct 13 14:54 init_data.xml
[2025-10-13 16:32:35] -rw-r--r-- 1 boinc boinc         0 Oct 13 14:54 boinc_lockfile
[2025-10-13 16:32:35] -rw-r--r-- 1 boinc boinc      2550 Oct 13 14:54 pandaJob.out
[2025-10-13 16:32:35] -rw------- 1 boinc boinc    972497 Oct 13 14:54 agis_schedconf.cvmfs.json
[2025-10-13 16:32:35] -rw------- 1 boinc boinc   1560580 Oct 13 14:54 agis_ddmendpoints.agis.ALL.json
[2025-10-13 16:32:35] drwx------ 5 boinc boinc      4096 Oct 13 14:54 pilot3
[2025-10-13 16:32:35] -rw------- 1 boinc boinc 202775957 Oct 13 16:31 HITS.46676269._091106.pool.root.1
[2025-10-13 16:32:35] -rw-r--r-- 1 boinc boinc       529 Oct 13 16:31 boinc_task_state.xml
[2025-10-13 16:32:35] -rw------- 1 boinc boinc      1020 Oct 13 16:31 memory_monitor_summary.json
[2025-10-13 16:32:35] -rw------- 1 boinc boinc    257383 Oct 13 16:31 log.46676269._091106.job.log.tgz.1
[2025-10-13 16:32:35] -rw------- 1 boinc boinc      7767 Oct 13 16:32 heartbeat.json
[2025-10-13 16:32:35] -rw-r--r-- 1 boinc boinc        27 Oct 13 16:32 wrapper_checkpoint.txt
[2025-10-13 16:32:35] -rw-r--r-- 1 boinc boinc      8192 Oct 13 16:32 boinc_mmap_file
[2025-10-13 16:32:35] -rw------- 1 boinc boinc       747 Oct 13 16:32 pilotlog.txt
[2025-10-13 16:32:35] -rw------- 1 boinc boinc        95 Oct 13 16:32 pilot_heartbeat.json
[2025-10-13 16:32:35] -rw------- 1 boinc boinc    847382 Oct 13 16:32 log.46676269._091106.job.log.1
[2025-10-13 16:32:35] -rw------- 1 boinc boinc       357 Oct 13 16:32 output.list
[2025-10-13 16:32:35] -rw-r--r-- 1 boinc boinc       620 Oct 13 16:32 runtime_log
[2025-10-13 16:32:35] -rw------- 1 boinc boinc   1126400 Oct 13 16:32 result.tar.gz
[2025-10-13 16:32:35] -rw-r--r-- 1 boinc boinc      8797 Oct 13 16:32 runtime_log.err
[2025-10-13 16:32:35] -rw------- 1 boinc boinc       663 Oct 13 16:32 qSQNDmfkJS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyrlNDmlLkIIm.diag
[2025-10-13 16:32:35] -rw-r--r-- 1 boinc boinc      7067 Oct 13 16:32 stderr.txt
[2025-10-13 16:32:35] HITS file was successfully produced:
[2025-10-13 16:32:35] -rw------- 1 boinc boinc 202775957 Oct 13 16:31 shared/HITS.pool.root.1
[2025-10-13 16:32:35]  *** Contents of shared directory: ***
[2025-10-13 16:32:35] total 416120
[2025-10-13 16:32:35] -rw-r--r-- 2 boinc boinc 221605548 Oct 13 14:54 ATLAS.root_0
[2025-10-13 16:32:35] -rw-r--r-- 2 boinc boinc    569682 Oct 13 14:54 input.tar.gz
[2025-10-13 16:32:35] -rw-r--r-- 2 boinc boinc     15120 Oct 13 14:54 start_atlas.sh
[2025-10-13 16:32:35] -rw------- 1 boinc boinc 202775957 Oct 13 16:31 HITS.pool.root.1
[2025-10-13 16:32:35] -rw------- 1 boinc boinc   1126400 Oct 13 16:32 result.tar.gz
16:32:36 (3413747): run_atlas exited; CPU time 16741.837248
16:32:36 (3413747): called boinc_finish(0)

</stderr_txt>
]]>

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