Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:53:29 (1288928): wrapper (7.7.26015): starting
23:53:29 (1288928): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 23:53:29] Arguments: --nthreads 8
[2025-10-12 23:53:29] Threads: 8
[2025-10-12 23:53:29] Checking for CVMFS
[2025-10-12 23:53:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 23:53:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 23:53:29] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 23:53:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 23:53:29] 2.13.2.0 2356181 130188 260984 151647 0 177 31719675 32935936 17420 16776704 0 124218326 99.728 93404124 30400 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 23:53:29] CVMFS is ok
[2025-10-12 23:53:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 23:53:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 23:53:29] Further information can be found at the LHC@home message board.
[2025-10-12 23:53:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 23:53:29] Checking for apptainer binary...
[2025-10-12 23:53:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 23:53:29] Running /usr/bin/apptainer --version
[2025-10-12 23:53:29] apptainer version 1.4.3-1.el9
[2025-10-12 23:53:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 23:53:49] c-6-2.aglt2.org
[2025-10-12 23:53:49] apptainer works
[2025-10-12 23:53:50] Set ATHENA_PROC_NUMBER=8
[2025-10-12 23:53:50] Set ATHENA_CORE_NUMBER=8
[2025-10-12 23:53:50] Starting ATLAS job with PandaID=6840714451
[2025-10-12 23:53:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 09:49:38]  *** The last 200 lines of the pilot log: ***
[2025-10-13 09:49:39] 2025-10-13 13:48:36,135 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 09:49:39] 2025-10-13 13:48:36,545 | INFO     | time since job start (35657s) is within the limit (172800.0s)
[2025-10-13 09:49:39] 2025-10-13 13:48:38,387 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 09:49:39] 2025-10-13 13:48:38,396 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.035075000002
[2025-10-13 09:49:39] 2025-10-13 13:48:38,438 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6840714451/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 09:49:39] 2025-10-13 13:48:38,439 | INFO     | extracted standard info from prmon json
[2025-10-13 09:49:39] 2025-10-13 13:48:38,439 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 09:49:39] 2025-10-13 13:48:38,439 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 09:49:39] 2025-10-13 13:48:38,439 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 09:49:39] 2025-10-13 13:48:38,440 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 09:49:39] 2025-10-13 13:48:38,485 | INFO     | fitting pss+swap vs Time
[2025-10-13 09:49:39] 2025-10-13 13:48:38,486 | INFO     | sum of square deviations: 61438114674.86797
[2025-10-13 09:49:39] 2025-10-13 13:48:38,501 | INFO     | sum of deviations: 54497369363.849144
[2025-10-13 09:49:39] 2025-10-13 13:48:38,501 | INFO     | mean x: 1760345518.3018868
[2025-10-13 09:49:39] 2025-10-13 13:48:38,502 | INFO     | mean y: 2246585.7735849055
[2025-10-13 09:49:39] 2025-10-13 13:48:38,502 | INFO     | -- intersect: -1559230364.2692435
[2025-10-13 09:49:39] 2025-10-13 13:48:38,502 | INFO     | intersect: -1559230364.2692435
[2025-10-13 09:49:39] 2025-10-13 13:48:38,503 | INFO     | chi2: 2.963254711518459
[2025-10-13 09:49:39] 2025-10-13 13:48:38,504 | INFO     | sum of square deviations: 59870994437.19206
[2025-10-13 09:49:39] 2025-10-13 13:48:38,513 | INFO     | sum of deviations: 91046152422.15746
[2025-10-13 09:49:39] 2025-10-13 13:48:38,514 | INFO     | mean x: 1760345365.814879
[2025-10-13 09:49:39] 2025-10-13 13:48:38,514 | INFO     | mean y: 2250120.749134948
[2025-10-13 09:49:39] 2025-10-13 13:48:38,514 | INFO     | -- intersect: -2674716814.546299
[2025-10-13 09:49:39] 2025-10-13 13:48:38,514 | INFO     | intersect: -2674716814.546299
[2025-10-13 09:49:39] 2025-10-13 13:48:38,515 | INFO     | chi2: 2.272609904541017
[2025-10-13 09:49:39] 2025-10-13 13:48:38,515 | INFO     | current chi2=2.272609904541017 (change=23.30696731174808 %)
[2025-10-13 09:49:39] 2025-10-13 13:48:38,515 | INFO     | right removable region: 577
[2025-10-13 09:49:39] 2025-10-13 13:48:38,516 | INFO     | sum of square deviations: 59870317810.64581
[2025-10-13 09:49:39] 2025-10-13 13:48:38,525 | INFO     | sum of deviations: -53024210428.221436
[2025-10-13 09:49:39] 2025-10-13 13:48:38,526 | INFO     | mean x: 1760345670.8217993
[2025-10-13 09:49:39] 2025-10-13 13:48:38,526 | INFO     | mean y: 2257018.366782007
[2025-10-13 09:49:39] 2025-10-13 13:48:38,526 | INFO     | -- intersect: 1561309027.5990818
[2025-10-13 09:49:39] 2025-10-13 13:48:38,526 | INFO     | intersect: 1561309027.5990818
[2025-10-13 09:49:39] 2025-10-13 13:48:38,527 | INFO     | chi2: 1.0534766789924606
[2025-10-13 09:49:39] 2025-10-13 13:48:38,527 | INFO     | current chi2=1.0534766789924606 (change=64.44866265132409 %)
[2025-10-13 09:49:39] 2025-10-13 13:48:38,528 | INFO     | sum of square deviations: 58329546093.665016
[2025-10-13 09:49:39] 2025-10-13 13:48:38,538 | INFO     | sum of deviations: -64288466750.0681
[2025-10-13 09:49:39] 2025-10-13 13:48:38,538 | INFO     | mean x: 1760345823.3350785
[2025-10-13 09:49:39] 2025-10-13 13:48:38,538 | INFO     | mean y: 2258127.0680628275
[2025-10-13 09:49:39] 2025-10-13 13:48:38,538 | INFO     | -- intersect: 1942440101.917846
[2025-10-13 09:49:39] 2025-10-13 13:48:38,539 | INFO     | intersect: 1942440101.917846
[2025-10-13 09:49:39] 2025-10-13 13:48:38,540 | INFO     | chi2: 1.0114149031810475
[2025-10-13 09:49:39] 2025-10-13 13:48:38,540 | INFO     | current chi2=1.0114149031810475 (change=3.9926632122165886 %)
[2025-10-13 09:49:39] 2025-10-13 13:48:38,540 | INFO     | left removable region: 20
[2025-10-13 09:49:39] 2025-10-13 13:48:38,541 | INFO     | sum of square deviations: 53577806118.07199
[2025-10-13 09:49:39] 2025-10-13 13:48:38,550 | INFO     | sum of deviations: -21528526351.377033
[2025-10-13 09:49:39] 2025-10-13 13:48:38,550 | INFO     | mean x: 1760345945.3716338
[2025-10-13 09:49:39] 2025-10-13 13:48:38,550 | INFO     | mean y: 2261665.798922801
[2025-10-13 09:49:39] 2025-10-13 13:48:38,550 | INFO     | -- intersect: 709600334.891794
[2025-10-13 09:49:39] 2025-10-13 13:48:38,551 | INFO     | intersect: 709600334.891794
[2025-10-13 09:49:39] 2025-10-13 13:48:38,555 | INFO     | chi2: 0.29273529560504125
[2025-10-13 09:49:39] 2025-10-13 13:48:38,556 | INFO     | -- intersect: 709600334.891794
[2025-10-13 09:49:39] 2025-10-13 13:48:38,556 | INFO     | current memory leak: -0.40 B/s (using 557 data points, chi2=0.29)
[2025-10-13 09:49:39] 2025-10-13 13:48:38,557 | INFO     | could have reported an average CPU frequency of 2600 MHz (23 samples)
[2025-10-13 09:49:39] 2025-10-13 13:48:38,557 | INFO     | ..............................
[2025-10-13 09:49:39] 2025-10-13 13:48:38,557 | INFO     | . Timing measurements:
[2025-10-13 09:49:39] 2025-10-13 13:48:38,557 | INFO     | . get job = 0 s
[2025-10-13 09:49:39] 2025-10-13 13:48:38,557 | INFO     | . initial setup = 4 s
[2025-10-13 09:49:39] 2025-10-13 13:48:38,557 | INFO     | . payload setup = 33 s
[2025-10-13 09:49:39] 2025-10-13 13:48:38,558 | INFO     | . stage-in = 0 s
[2025-10-13 09:49:39] 2025-10-13 13:48:38,558 | INFO     | . payload execution = 35558 s
[2025-10-13 09:49:39] 2025-10-13 13:48:38,558 | INFO     | . stage-out = 2 s
[2025-10-13 09:49:39] 2025-10-13 13:48:38,558 | INFO     | . log creation = 0 s
[2025-10-13 09:49:39] 2025-10-13 13:48:38,558 | INFO     | ..............................
[2025-10-13 09:49:39] 2025-10-13 13:48:38,566 | INFO     | time since job start (35659s) is within the limit (172800.0s)
[2025-10-13 09:49:39] 2025-10-13 13:48:38,825 | INFO     | 
[2025-10-13 09:49:39] 2025-10-13 13:48:38,826 | INFO     | job summary report
[2025-10-13 09:49:39] 2025-10-13 13:48:38,826 | INFO     | --------------------------------------------------
[2025-10-13 09:49:39] 2025-10-13 13:48:38,826 | INFO     | PanDA job id: 6840714451
[2025-10-13 09:49:39] 2025-10-13 13:48:38,826 | INFO     | task id: 46676269
[2025-10-13 09:49:39] 2025-10-13 13:48:38,826 | INFO     | errors: (none)
[2025-10-13 09:49:39] 2025-10-13 13:48:38,826 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 09:49:39] 2025-10-13 13:48:38,826 | INFO     | pilot state: finished 
[2025-10-13 09:49:39] 2025-10-13 13:48:38,827 | INFO     | transexitcode: 0
[2025-10-13 09:49:39] 2025-10-13 13:48:38,827 | INFO     | exeerrorcode: 0
[2025-10-13 09:49:39] 2025-10-13 13:48:38,827 | INFO     | exeerrordiag: 
[2025-10-13 09:49:39] 2025-10-13 13:48:38,827 | INFO     | exitcode: 0
[2025-10-13 09:49:39] 2025-10-13 13:48:38,827 | INFO     | exitmsg: OK
[2025-10-13 09:49:39] 2025-10-13 13:48:38,827 | INFO     | cpuconsumptiontime: 47717 s
[2025-10-13 09:49:39] 2025-10-13 13:48:38,827 | INFO     | nevents: 400
[2025-10-13 09:49:39] 2025-10-13 13:48:38,827 | INFO     | neventsw: 0
[2025-10-13 09:49:39] 2025-10-13 13:48:38,828 | INFO     | pid: 1320167
[2025-10-13 09:49:39] 2025-10-13 13:48:38,828 | INFO     | pgrp: 1320167
[2025-10-13 09:49:39] 2025-10-13 13:48:38,828 | INFO     | corecount: 8
[2025-10-13 09:49:39] 2025-10-13 13:48:38,828 | INFO     | event service: False
[2025-10-13 09:49:39] 2025-10-13 13:48:38,828 | INFO     | sizes: {0: 2348686, 1: 2348885, 2: 2348885, 13: 2348913, 16: 2349231, 23: 2349259, 35595: 2388932, 35599: 2397930, 35600: 2397986, 35617: 2398180}
[2025-10-13 09:49:39] 2025-10-13 13:48:38,828 | INFO     | --------------------------------------------------
[2025-10-13 09:49:39] 2025-10-13 13:48:38,828 | INFO     | 
[2025-10-13 09:49:39] 2025-10-13 13:48:38,829 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-13 09:49:39] 2025-10-13 13:48:38,953 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 09:49:39] 2025-10-13 13:48:38,953 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 09:49:39] 2025-10-13 13:48:38,953 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 09:49:39] 2025-10-13 13:48:38,953 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 09:49:39] 2025-10-13 13:48:38,953 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 09:49:39] 2025-10-13 13:48:38,953 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 09:49:39] 2025-10-13 13:48:38,954 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 09:49:39] 2025-10-13 13:48:38,954 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 09:49:39] 2025-10-13 13:48:38,954 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 09:49:39] 2025-10-13 13:48:38,954 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 09:49:39] 2025-10-13 13:48:38,954 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 09:49:39] 2025-10-13 13:48:38,954 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 09:49:39] 2025-10-13 13:48:38,954 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 09:49:39] 2025-10-13 13:48:38,954 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 09:49:39] 2025-10-13 13:48:38,954 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 09:49:39] 2025-10-13 13:48:38,954 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 09:49:39] 2025-10-13 13:48:38,955 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 09:49:39] 2025-10-13 13:48:38,955 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 09:49:39] 2025-10-13 13:48:38,955 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 09:49:39] 2025-10-13 13:48:38,955 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 09:49:39] 2025-10-13 13:48:38,955 | INFO     | job 6840714451 has completed (purged errors)
[2025-10-13 09:49:39] 2025-10-13 13:48:38,955 | INFO     | overall cleanup function is called
[2025-10-13 09:49:39] 2025-10-13 13:48:40,002 | INFO     | --- collectZombieJob: --- 10, [1320167]
[2025-10-13 09:49:39] 2025-10-13 13:48:40,003 | INFO     | zombie collector waiting for pid 1320167
[2025-10-13 09:49:39] 2025-10-13 13:48:40,003 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 09:49:39] 2025-10-13 13:48:40,003 | INFO     | collected zombie processes
[2025-10-13 09:49:39] 2025-10-13 13:48:40,003 | INFO     | will attempt to kill all subprocesses of pid=1320167
[2025-10-13 09:49:39] 2025-10-13 13:48:40,767 | INFO     | process IDs to be killed: [1320167] (in reverse order)
[2025-10-13 09:49:39] 2025-10-13 13:48:40,974 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 09:49:39] 2025-10-13 13:48:40,975 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 09:49:39] 2025-10-13 13:48:41,004 | INFO     | did not find any defunct processes belonging to 1320167
[2025-10-13 09:49:39] 2025-10-13 13:48:41,020 | INFO     | did not find any defunct processes belonging to 1320167
[2025-10-13 09:49:39] 2025-10-13 13:48:41,021 | INFO     | ready for new job
[2025-10-13 09:49:39] 2025-10-13 13:48:41,021 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 09:49:39] 2025-10-13 13:48:41,024 | INFO     | ***************************************
[2025-10-13 09:49:39] 2025-10-13 13:48:41,024 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 09:49:39] 2025-10-13 13:48:41,024 | INFO     | ***************************************
[2025-10-13 09:49:39] 2025-10-13 13:48:41,024 | INFO     | 
[2025-10-13 09:49:39] 2025-10-13 13:48:41,039 | INFO     | architecture information:
[2025-10-13 09:49:39] 2025-10-13 13:48:41,040 | INFO     | executing command: cat /etc/os-release
[2025-10-13 09:49:39] 2025-10-13 13:48:41,095 | INFO     | cat /etc/os-release:
[2025-10-13 09:49:39] NAME="CentOS Linux"
[2025-10-13 09:49:39] VERSION="7 (Core)"
[2025-10-13 09:49:39] ID="centos"
[2025-10-13 09:49:39] ID_LIKE="rhel fedora"
[2025-10-13 09:49:39] VERSION_ID="7"
[2025-10-13 09:49:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 09:49:39] ANSI_COLOR="0;31"
[2025-10-13 09:49:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 09:49:39] HOME_URL="https://www.centos.org/"
[2025-10-13 09:49:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 09:49:39] 
[2025-10-13 09:49:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 09:49:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 09:49:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 09:49:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 09:49:39] 
[2025-10-13 09:49:39] 2025-10-13 13:48:41,095 | INFO     | ***************************************
[2025-10-13 09:49:39] 2025-10-13 13:48:41,600 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-13 09:49:39] 2025-10-13 13:48:41,662 | INFO     | sufficient remaining disk space (74443653120 B)
[2025-10-13 09:49:39] 2025-10-13 13:48:41,662 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 09:49:39] 2025-10-13 13:48:41,662 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 09:49:39] 2025-10-13 13:48:41,663 | INFO     | update_server=False
[2025-10-13 09:49:39] 2025-10-13 13:48:41,663 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 09:49:39] 2025-10-13 13:48:41,663 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 09:49:39] 2025-10-13 13:48:41,870 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 09:49:39] 2025-10-13 13:48:41,880 | INFO     | all payload control threads have been joined
[2025-10-13 09:49:39] 2025-10-13 13:48:41,894 | INFO     | all data control threads have been joined
[2025-10-13 09:49:39] 2025-10-13 13:48:42,242 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:49:39] 2025-10-13 13:48:42,243 | INFO     | aborting loop
[2025-10-13 09:49:39] 2025-10-13 13:48:42,308 | INFO     | all job control threads have been joined
[2025-10-13 09:49:39] 2025-10-13 13:48:42,673 | INFO     | [job] retrieve thread has finished
[2025-10-13 09:49:39] 2025-10-13 13:48:42,764 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 09:49:39] 2025-10-13 13:48:42,876 | INFO     | [job] validate thread has finished
[2025-10-13 09:49:39] 2025-10-13 13:48:42,888 | INFO     | [payload] control thread has finished
[2025-10-13 09:49:39] 2025-10-13 13:48:42,901 | INFO     | [data] control thread has finished
[2025-10-13 09:49:39] 2025-10-13 13:48:43,113 | INFO     | [payload] failed_post thread has finished
[2025-10-13 09:49:39] 2025-10-13 13:48:43,117 | INFO     | [data] copytool_in thread has finished
[2025-10-13 09:49:39] 2025-10-13 13:48:43,284 | INFO     | [job] job monitor thread has finished
[2025-10-13 09:49:39] 2025-10-13 13:48:43,314 | INFO     | [job] control thread has finished
[2025-10-13 09:49:39] 2025-10-13 13:48:43,497 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 09:49:39] 2025-10-13 13:48:43,883 | INFO     | [data] copytool_out thread has finished
[2025-10-13 09:49:39] 2025-10-13 13:48:43,908 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:49:39] 2025-10-13 13:48:43,911 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 09:49:39] 2025-10-13 13:48:43,936 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 09:49:39] 2025-10-13 13:48:44,222 | INFO     | [payload] validate_post thread has finished
[2025-10-13 09:49:39] 2025-10-13 13:48:44,914 | INFO     | [job] queue monitor thread has finished
[2025-10-13 09:49:39] 2025-10-13 13:48:45,672 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 09:49:39] 2025-10-13 13:49:12,290 | INFO     | PID=1293238 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 09:49:39] 2025-10-13 13:49:12,291 | INFO     | .. there are 25 such processes running
[2025-10-13 09:49:39] 2025-10-13 13:49:12,291 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 09:49:39] 2025-10-13 13:49:12,291 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 09:49:39] 2025-10-13 13:49:12,291 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 09:49:39] 2025-10-13 13:49:30,900 | INFO     | [monitor] cgroup control has ended
[2025-10-13 09:49:39] 2025-10-13 13:49:32,679 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139856936036160)>', '<ExcThread(monitor, started 139856105678592)>']
[2025-10-13 09:49:39] 2025-10-13 13:49:33,432 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 09:49:39] 2025-10-13 13:49:33,433 | INFO     | [monitor] control thread has ended
[2025-10-13 09:49:39] 2025-10-13 13:49:37,705 | INFO     | all workflow threads have been joined
[2025-10-13 09:49:39] 2025-10-13 13:49:37,706 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 09:49:39] 2025-10-13 13:49:37,706 | INFO     | traces error code: 0
[2025-10-13 09:49:39] 2025-10-13 13:49:37,706 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 09:49:39] 2025-10-13 13:49:38,232 [wrapper] ==== pilot stdout END ====
[2025-10-13 09:49:39] 2025-10-13 13:49:38,239 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 09:49:39] 2025-10-13 13:49:38,242 [wrapper] pilotpid: 1293238
[2025-10-13 09:49:39] 2025-10-13 13:49:38,246 [wrapper] Pilot exit status: 0
[2025-10-13 09:49:39] 2025-10-13 13:49:38,270 [wrapper] pandaids: 6840714451
[2025-10-13 09:49:39] 2025-10-13 13:49:38,385 [wrapper] cleanup supervisor_pilot 3037197 1293239
[2025-10-13 09:49:39] 2025-10-13 13:49:38,399 [wrapper] Test setup, not cleaning
[2025-10-13 09:49:39] 2025-10-13 13:49:38,402 [wrapper] apfmon messages muted
[2025-10-13 09:49:39] 2025-10-13 13:49:38,405 [wrapper] ==== wrapper stdout END ====
[2025-10-13 09:49:39] 2025-10-13 13:49:38,408 [wrapper] ==== wrapper stderr END ====
[2025-10-13 09:49:39]  *** Error codes and diagnostics ***
[2025-10-13 09:49:39]     "exeErrorCode": 0,
[2025-10-13 09:49:39]     "exeErrorDiag": "",
[2025-10-13 09:49:39]     "pilotErrorCode": 0,
[2025-10-13 09:49:39]     "pilotErrorDiag": "",
[2025-10-13 09:49:39]  *** Listing of results directory ***
[2025-10-13 09:49:39] total 413096
[2025-10-13 09:49:39] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 15:28 pilot3.tar.gz
[2025-10-13 09:49:39] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 15:43 queuedata.json
[2025-10-13 09:49:39] -rwx------. 1 boincer umatlas     36292 Oct 12 15:43 runpilot2-wrapper.sh
[2025-10-13 09:49:39] -rw-r--r--. 1 boincer umatlas       100 Oct 12 23:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 09:49:39] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 23:53 run_atlas
[2025-10-13 09:49:39] -rw-r--r--. 1 boincer umatlas       105 Oct 12 23:53 job.xml
[2025-10-13 09:49:39] -rw-r--r--. 2 boincer umatlas 220212047 Oct 12 23:53 EVNT.46676267._004468.pool.root.1
[2025-10-13 09:49:39] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 23:53 start_atlas.sh
[2025-10-13 09:49:39] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 23:53 shared
[2025-10-13 09:49:39] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 23:53 input.tar.gz
[2025-10-13 09:49:39] -rw-r--r--. 1 boincer umatlas         0 Oct 12 23:53 boinc_lockfile
[2025-10-13 09:49:39] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 23:53 pandaJob.out
[2025-10-13 09:49:39] -rw-------. 1 boincer umatlas    974373 Oct 12 23:54 agis_schedconf.cvmfs.json
[2025-10-13 09:49:39] drwx------. 5 boincer umatlas      4096 Oct 12 23:54 pilot3
[2025-10-13 09:49:39] -rw-------. 1 boincer umatlas 189600265 Oct 13 09:47 HITS.46676269._087847.pool.root.1
[2025-10-13 09:49:39] -rw-r--r--. 1 boincer umatlas       531 Oct 13 09:47 boinc_task_state.xml
[2025-10-13 09:49:39] -rw-------. 1 boincer umatlas      1043 Oct 13 09:48 memory_monitor_summary.json
[2025-10-13 09:49:39] -rw-------. 1 boincer umatlas   1560580 Oct 13 09:48 agis_ddmendpoints.agis.ALL.json
[2025-10-13 09:49:39] -rw-------. 1 boincer umatlas    702628 Oct 13 09:48 log.46676269._087847.job.log.tgz.1
[2025-10-13 09:49:39] -rw-------. 1 boincer umatlas        95 Oct 13 09:48 pilot_heartbeat.json
[2025-10-13 09:49:39] -rw-------. 1 boincer umatlas      7824 Oct 13 09:48 heartbeat.json
[2025-10-13 09:49:39] -rw-r--r--. 1 boincer umatlas      6657 Oct 13 09:48 init_data.xml
[2025-10-13 09:49:39] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 09:49 boinc_mmap_file
[2025-10-13 09:49:39] -rw-r--r--. 1 boincer umatlas        28 Oct 13 09:49 wrapper_checkpoint.txt
[2025-10-13 09:49:39] -rw-------. 1 boincer umatlas      4824 Oct 13 09:49 pilotlog.txt
[2025-10-13 09:49:39] -rw-------. 1 boincer umatlas   3944961 Oct 13 09:49 log.46676269._087847.job.log.1
[2025-10-13 09:49:39] -rw-------. 1 boincer umatlas       357 Oct 13 09:49 output.list
[2025-10-13 09:49:39] -rw-r--r--. 1 boincer umatlas       620 Oct 13 09:49 runtime_log
[2025-10-13 09:49:39] -rw-------. 1 boincer umatlas   4669440 Oct 13 09:49 result.tar.gz
[2025-10-13 09:49:39] -rw-------. 1 boincer umatlas       655 Oct 13 09:49 SKhNDmCAHS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdJlNDmMAd8Vm.diag
[2025-10-13 09:49:39] -rw-r--r--. 1 boincer umatlas      8689 Oct 13 09:49 runtime_log.err
[2025-10-13 09:49:39] -rw-r--r--. 1 boincer umatlas     21231 Oct 13 09:49 stderr.txt
[2025-10-13 09:49:39] HITS file was successfully produced:
[2025-10-13 09:49:39] -rw-------. 1 boincer umatlas 189600265 Oct 13 09:47 shared/HITS.pool.root.1
[2025-10-13 09:49:39]  *** Contents of shared directory: ***
[2025-10-13 09:49:39] total 405352
[2025-10-13 09:49:39] -rw-r--r--. 2 boincer umatlas 220212047 Oct 12 23:53 ATLAS.root_0
[2025-10-13 09:49:39] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 23:53 start_atlas.sh
[2025-10-13 09:49:39] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 23:53 input.tar.gz
[2025-10-13 09:49:39] -rw-------. 1 boincer umatlas 189600265 Oct 13 09:47 HITS.pool.root.1
[2025-10-13 09:49:39] -rw-------. 1 boincer umatlas   4669440 Oct 13 09:49 result.tar.gz
09:49:40 (1288928): run_atlas exited; CPU time 48941.196035
09:49:40 (1288928): called boinc_finish(0)

</stderr_txt>
]]>

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