Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:12:45 (178810): wrapper (7.7.26015): starting
23:12:45 (178810): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 23:12:45] Arguments: --nthreads 8
[2025-10-12 23:12:45] Threads: 8
[2025-10-12 23:12:45] Checking for CVMFS
[2025-10-12 23:12:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 23:12:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 23:12:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 23:12:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 23:12:47] 2.13.2.0 2498914 130127 475676 151645 1 747 17204587 32935937 27048 16776704 0 242713041 99.610 242761667 20739 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 23:12:47] CVMFS is ok
[2025-10-12 23:12:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 23:12:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 23:12:47] Further information can be found at the LHC@home message board.
[2025-10-12 23:12:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 23:12:47] Checking for apptainer binary...
[2025-10-12 23:12:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 23:12:47] Running /usr/bin/apptainer --version
[2025-10-12 23:12:47] apptainer version 1.4.3-1.el9
[2025-10-12 23:12:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 23:12:48] c6-2-11-3.aglt2.org
[2025-10-12 23:12:48] apptainer works
[2025-10-12 23:12:48] Set ATHENA_PROC_NUMBER=8
[2025-10-12 23:12:48] Set ATHENA_CORE_NUMBER=8
[2025-10-12 23:12:48] Starting ATLAS job with PandaID=6840850897
[2025-10-12 23:12:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:06:35]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:06:35] 2025-10-13 07:05:38,765 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 03:06:35] 2025-10-13 07:05:38,765 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 03:06:35] 2025-10-13 07:05:38,765 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 03:06:35] 2025-10-13 07:05:38,770 | INFO     | fitting pss+swap vs Time
[2025-10-13 03:06:35] 2025-10-13 07:05:38,771 | INFO     | sum of square deviations: 3531887265.982213
[2025-10-13 03:06:35] 2025-10-13 07:05:38,773 | INFO     | sum of deviations: -7530845943.048873
[2025-10-13 03:06:35] 2025-10-13 07:05:38,773 | INFO     | mean x: 1760332250.768889
[2025-10-13 03:06:35] 2025-10-13 07:05:38,773 | INFO     | mean y: 2165876.3644444444
[2025-10-13 03:06:35] 2025-10-13 07:05:38,773 | INFO     | -- intersect: 3755624011.00122
[2025-10-13 03:06:35] 2025-10-13 07:05:38,773 | INFO     | intersect: 3755624011.00122
[2025-10-13 03:06:35] 2025-10-13 07:05:38,774 | INFO     | chi2: 3.096165709944783
[2025-10-13 03:06:35] 2025-10-13 07:05:38,774 | INFO     | sum of square deviations: 3301638736.086366
[2025-10-13 03:06:35] 2025-10-13 07:05:38,776 | INFO     | sum of deviations: -6670782261.07726
[2025-10-13 03:06:35] 2025-10-13 07:05:38,776 | INFO     | mean x: 1760332098.2772727
[2025-10-13 03:06:35] 2025-10-13 07:05:38,776 | INFO     | mean y: 2166438.8045454547
[2025-10-13 03:06:35] 2025-10-13 07:05:38,776 | INFO     | -- intersect: 3558822109.9554086
[2025-10-13 03:06:35] 2025-10-13 07:05:38,776 | INFO     | intersect: 3558822109.9554086
[2025-10-13 03:06:35] 2025-10-13 07:05:38,777 | INFO     | chi2: 3.0961521301698176
[2025-10-13 03:06:35] 2025-10-13 07:05:38,777 | INFO     | current chi2=3.0961521301698176 (change=0.0004385997468350344 %)
[2025-10-13 03:06:35] 2025-10-13 07:05:38,777 | INFO     | right removable region: 219
[2025-10-13 03:06:35] 2025-10-13 07:05:38,778 | INFO     | sum of square deviations: 3301587742.086366
[2025-10-13 03:06:35] 2025-10-13 07:05:38,779 | INFO     | sum of deviations: -51370360084.950005
[2025-10-13 03:06:35] 2025-10-13 07:05:38,780 | INFO     | mean x: 1760332403.2772727
[2025-10-13 03:06:35] 2025-10-13 07:05:38,780 | INFO     | mean y: 2194760.95
[2025-10-13 03:06:35] 2025-10-13 07:05:38,780 | INFO     | -- intersect: 27391716557.639965
[2025-10-13 03:06:35] 2025-10-13 07:05:38,780 | INFO     | intersect: 27391716557.639965
[2025-10-13 03:06:35] 2025-10-13 07:05:38,780 | INFO     | chi2: 0.8176662632437072
[2025-10-13 03:06:35] 2025-10-13 07:05:38,780 | INFO     | current chi2=0.8176662632437072 (change=73.59100449251183 %)
[2025-10-13 03:06:35] 2025-10-13 07:05:38,781 | INFO     | sum of square deviations: 3081547685.2837076
[2025-10-13 03:06:35] 2025-10-13 07:05:38,782 | INFO     | sum of deviations: -64298440508.10236
[2025-10-13 03:06:35] 2025-10-13 07:05:38,783 | INFO     | mean x: 1760332555.7767441
[2025-10-13 03:06:35] 2025-10-13 07:05:38,783 | INFO     | mean y: 2203677.5395348836
[2025-10-13 03:06:35] 2025-10-13 07:05:38,783 | INFO     | -- intersect: 36732655279.05874
[2025-10-13 03:06:35] 2025-10-13 07:05:38,783 | INFO     | intersect: 36732655279.05874
[2025-10-13 03:06:35] 2025-10-13 07:05:38,783 | INFO     | chi2: 0.5405313751635915
[2025-10-13 03:06:35] 2025-10-13 07:05:38,783 | INFO     | current chi2=0.5405313751635915 (change=33.89339887654323 %)
[2025-10-13 03:06:35] 2025-10-13 07:05:38,784 | INFO     | sum of square deviations: 2871494208.423795
[2025-10-13 03:06:35] 2025-10-13 07:05:38,785 | INFO     | sum of deviations: -66141211177.27143
[2025-10-13 03:06:35] 2025-10-13 07:05:38,785 | INFO     | mean x: 1760332708.2809525
[2025-10-13 03:06:35] 2025-10-13 07:05:38,786 | INFO     | mean y: 2204977.157142857
[2025-10-13 03:06:35] 2025-10-13 07:05:38,786 | INFO     | -- intersect: 40549226475.27084
[2025-10-13 03:06:35] 2025-10-13 07:05:38,786 | INFO     | intersect: 40549226475.27084
[2025-10-13 03:06:35] 2025-10-13 07:05:38,786 | INFO     | chi2: 0.484971623607171
[2025-10-13 03:06:35] 2025-10-13 07:05:38,786 | INFO     | current chi2=0.484971623607171 (change=10.278728323514132 %)
[2025-10-13 03:06:35] 2025-10-13 07:05:38,786 | INFO     | left removable region: 30
[2025-10-13 03:06:35] 2025-10-13 07:05:38,787 | INFO     | sum of square deviations: 2093272638.3597832
[2025-10-13 03:06:35] 2025-10-13 07:05:38,788 | INFO     | sum of deviations: -37613426791.27512
[2025-10-13 03:06:35] 2025-10-13 07:05:38,788 | INFO     | mean x: 1760332982.7989419
[2025-10-13 03:06:35] 2025-10-13 07:05:38,788 | INFO     | mean y: 2184198.6243386245
[2025-10-13 03:06:35] 2025-10-13 07:05:38,788 | INFO     | -- intersect: 31633112040.234383
[2025-10-13 03:06:35] 2025-10-13 07:05:38,788 | INFO     | intersect: 31633112040.234383
[2025-10-13 03:06:35] 2025-10-13 07:05:38,789 | INFO     | chi2: 0.39560028091140875
[2025-10-13 03:06:35] 2025-10-13 07:05:38,789 | INFO     | -- intersect: 31633112040.234383
[2025-10-13 03:06:35] 2025-10-13 07:05:38,789 | INFO     | current memory leak: -17.97 B/s (using 189 data points, chi2=0.40)
[2025-10-13 03:06:35] 2025-10-13 07:05:38,790 | INFO     | could have reported an average CPU frequency of 2582 MHz (11 samples)
[2025-10-13 03:06:35] 2025-10-13 07:05:38,790 | INFO     | ..............................
[2025-10-13 03:06:35] 2025-10-13 07:05:38,790 | INFO     | . Timing measurements:
[2025-10-13 03:06:35] 2025-10-13 07:05:38,790 | INFO     | . get job = 0 s
[2025-10-13 03:06:35] 2025-10-13 07:05:38,790 | INFO     | . initial setup = 4 s
[2025-10-13 03:06:35] 2025-10-13 07:05:38,790 | INFO     | . payload setup = 55 s
[2025-10-13 03:06:35] 2025-10-13 07:05:38,790 | INFO     | . stage-in = 1 s
[2025-10-13 03:06:35] 2025-10-13 07:05:38,790 | INFO     | . payload execution = 13739 s
[2025-10-13 03:06:35] 2025-10-13 07:05:38,791 | INFO     | . stage-out = 2 s
[2025-10-13 03:06:35] 2025-10-13 07:05:38,791 | INFO     | . log creation = 0 s
[2025-10-13 03:06:35] 2025-10-13 07:05:38,791 | INFO     | ..............................
[2025-10-13 03:06:35] 2025-10-13 07:05:38,898 | INFO     | 
[2025-10-13 03:06:35] 2025-10-13 07:05:38,899 | INFO     | job summary report
[2025-10-13 03:06:35] 2025-10-13 07:05:38,899 | INFO     | --------------------------------------------------
[2025-10-13 03:06:35] 2025-10-13 07:05:38,899 | INFO     | PanDA job id: 6840850897
[2025-10-13 03:06:35] 2025-10-13 07:05:38,899 | INFO     | task id: 46676269
[2025-10-13 03:06:35] 2025-10-13 07:05:38,899 | INFO     | errors: (none)
[2025-10-13 03:06:35] 2025-10-13 07:05:38,899 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 03:06:35] 2025-10-13 07:05:38,899 | INFO     | pilot state: finished 
[2025-10-13 03:06:35] 2025-10-13 07:05:38,899 | INFO     | transexitcode: 0
[2025-10-13 03:06:35] 2025-10-13 07:05:38,899 | INFO     | exeerrorcode: 0
[2025-10-13 03:06:35] 2025-10-13 07:05:38,899 | INFO     | exeerrordiag: 
[2025-10-13 03:06:35] 2025-10-13 07:05:38,900 | INFO     | exitcode: 0
[2025-10-13 03:06:35] 2025-10-13 07:05:38,900 | INFO     | exitmsg: OK
[2025-10-13 03:06:35] 2025-10-13 07:05:38,900 | INFO     | cpuconsumptiontime: 42028 s
[2025-10-13 03:06:35] 2025-10-13 07:05:38,900 | INFO     | nevents: 400
[2025-10-13 03:06:35] 2025-10-13 07:05:38,900 | INFO     | neventsw: 0
[2025-10-13 03:06:35] 2025-10-13 07:05:38,900 | INFO     | pid: 196034
[2025-10-13 03:06:35] 2025-10-13 07:05:38,900 | INFO     | pgrp: 196034
[2025-10-13 03:06:35] 2025-10-13 07:05:38,900 | INFO     | corecount: 8
[2025-10-13 03:06:35] 2025-10-13 07:05:38,900 | INFO     | event service: False
[2025-10-13 03:06:35] 2025-10-13 07:05:38,900 | INFO     | sizes: {0: 2348685, 1: 2348685, 2: 2348912, 13: 2348912, 24: 2348968, 36: 2348996, 42: 2349414, 47: 2349470, 13799: 2379618, 13802: 2388672, 13811: 2388810}
[2025-10-13 03:06:35] 2025-10-13 07:05:38,900 | INFO     | --------------------------------------------------
[2025-10-13 03:06:35] 2025-10-13 07:05:38,900 | INFO     | 
[2025-10-13 03:06:35] 2025-10-13 07:05:38,900 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-13 03:06:35] 2025-10-13 07:05:38,925 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 03:06:35] 2025-10-13 07:05:38,926 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 03:06:35] 2025-10-13 07:05:38,926 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 03:06:35] 2025-10-13 07:05:38,926 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 03:06:35] 2025-10-13 07:05:38,926 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 03:06:35] 2025-10-13 07:05:38,926 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 03:06:35] 2025-10-13 07:05:38,926 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 03:06:35] 2025-10-13 07:05:38,926 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 03:06:35] 2025-10-13 07:05:38,926 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 03:06:35] 2025-10-13 07:05:38,926 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 03:06:35] 2025-10-13 07:05:38,926 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 03:06:35] 2025-10-13 07:05:38,927 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 03:06:35] 2025-10-13 07:05:38,927 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 03:06:35] 2025-10-13 07:05:38,927 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 03:06:35] 2025-10-13 07:05:38,927 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 03:06:35] 2025-10-13 07:05:38,927 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 03:06:35] 2025-10-13 07:05:38,927 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 03:06:35] 2025-10-13 07:05:38,927 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 03:06:35] 2025-10-13 07:05:38,927 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 03:06:35] 2025-10-13 07:05:38,927 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 03:06:35] 2025-10-13 07:05:38,927 | INFO     | job 6840850897 has completed (purged errors)
[2025-10-13 03:06:35] 2025-10-13 07:05:38,927 | INFO     | overall cleanup function is called
[2025-10-13 03:06:35] 2025-10-13 07:05:39,937 | INFO     | --- collectZombieJob: --- 10, [196034]
[2025-10-13 03:06:35] 2025-10-13 07:05:39,937 | INFO     | zombie collector waiting for pid 196034
[2025-10-13 03:06:35] 2025-10-13 07:05:39,937 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 03:06:35] 2025-10-13 07:05:39,937 | INFO     | collected zombie processes
[2025-10-13 03:06:35] 2025-10-13 07:05:39,937 | INFO     | will attempt to kill all subprocesses of pid=196034
[2025-10-13 03:06:35] 2025-10-13 07:05:40,625 | INFO     | process IDs to be killed: [196034] (in reverse order)
[2025-10-13 03:06:35] 2025-10-13 07:05:40,763 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 03:06:35] 2025-10-13 07:05:40,764 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 03:06:35] 2025-10-13 07:05:40,827 | INFO     | did not find any defunct processes belonging to 196034
[2025-10-13 03:06:35] 2025-10-13 07:05:40,844 | INFO     | did not find any defunct processes belonging to 196034
[2025-10-13 03:06:35] 2025-10-13 07:05:40,844 | INFO     | ready for new job
[2025-10-13 03:06:35] 2025-10-13 07:05:40,845 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 03:06:35] 2025-10-13 07:05:40,847 | INFO     | ***************************************
[2025-10-13 03:06:35] 2025-10-13 07:05:40,847 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 03:06:35] 2025-10-13 07:05:40,847 | INFO     | ***************************************
[2025-10-13 03:06:35] 2025-10-13 07:05:40,847 | INFO     | 
[2025-10-13 03:06:35] 2025-10-13 07:05:40,871 | INFO     | architecture information:
[2025-10-13 03:06:35] 2025-10-13 07:05:40,872 | INFO     | executing command: cat /etc/os-release
[2025-10-13 03:06:35] 2025-10-13 07:05:40,891 | INFO     | cat /etc/os-release:
[2025-10-13 03:06:35] NAME="CentOS Linux"
[2025-10-13 03:06:35] VERSION="7 (Core)"
[2025-10-13 03:06:35] ID="centos"
[2025-10-13 03:06:35] ID_LIKE="rhel fedora"
[2025-10-13 03:06:35] VERSION_ID="7"
[2025-10-13 03:06:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 03:06:35] ANSI_COLOR="0;31"
[2025-10-13 03:06:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 03:06:35] HOME_URL="https://www.centos.org/"
[2025-10-13 03:06:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 03:06:35] 
[2025-10-13 03:06:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 03:06:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 03:06:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 03:06:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 03:06:35] 
[2025-10-13 03:06:35] 2025-10-13 07:05:40,892 | INFO     | ***************************************
[2025-10-13 03:06:35] 2025-10-13 07:05:41,395 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-13 03:06:35] 2025-10-13 07:05:41,483 | INFO     | sufficient remaining disk space (73756835840 B)
[2025-10-13 03:06:35] 2025-10-13 07:05:41,484 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 03:06:35] 2025-10-13 07:05:41,484 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 03:06:35] 2025-10-13 07:05:41,484 | INFO     | update_server=False
[2025-10-13 03:06:35] 2025-10-13 07:05:41,484 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 03:06:35] 2025-10-13 07:05:41,489 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:06:35] 2025-10-13 07:05:41,489 | INFO     | aborting loop
[2025-10-13 03:06:35] 2025-10-13 07:05:41,942 | INFO     | all data control threads have been joined
[2025-10-13 03:06:35] 2025-10-13 07:05:42,066 | INFO     | all job control threads have been joined
[2025-10-13 03:06:35] 2025-10-13 07:05:42,474 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 03:06:35] 2025-10-13 07:05:42,490 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:06:35] 2025-10-13 07:05:42,495 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:06:35] 2025-10-13 07:05:42,529 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:06:35] 2025-10-13 07:05:42,559 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:06:35] 2025-10-13 07:05:42,852 | INFO     | all payload control threads have been joined
[2025-10-13 03:06:35] 2025-10-13 07:05:42,948 | INFO     | [data] control thread has finished
[2025-10-13 03:06:35] 2025-10-13 07:05:43,004 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:06:35] 2025-10-13 07:05:43,072 | INFO     | [job] control thread has finished
[2025-10-13 03:06:35] 2025-10-13 07:05:43,581 | INFO     | [job] validate thread has finished
[2025-10-13 03:06:35] 2025-10-13 07:05:43,595 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:06:35] 2025-10-13 07:05:43,621 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:06:35] 2025-10-13 07:05:43,667 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:06:35] 2025-10-13 07:05:43,858 | INFO     | [payload] control thread has finished
[2025-10-13 03:06:35] 2025-10-13 07:05:43,913 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:06:35] 2025-10-13 07:05:43,985 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:06:35] 2025-10-13 07:05:44,481 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:06:35] 2025-10-13 07:05:44,590 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:06:35] 2025-10-13 07:05:44,920 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:06:35] 2025-10-13 07:05:48,599 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:06:35] 2025-10-13 07:06:11,838 | INFO     | PID=185761 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 03:06:35] 2025-10-13 07:06:11,839 | INFO     | .. there are 29 such processes running
[2025-10-13 03:06:35] 2025-10-13 07:06:11,842 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:06:35] 2025-10-13 07:06:11,842 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:06:35] 2025-10-13 07:06:11,842 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:06:35] 2025-10-13 07:06:29,743 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:06:35] 2025-10-13 07:06:29,883 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140508350125888)>', '<ExcThread(monitor, started 140507590137600)>']
[2025-10-13 03:06:35] 2025-10-13 07:06:29,949 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:06:35] 2025-10-13 07:06:29,949 | INFO     | [monitor] control thread has ended
[2025-10-13 03:06:35] 2025-10-13 07:06:34,909 | INFO     | all workflow threads have been joined
[2025-10-13 03:06:35] 2025-10-13 07:06:34,909 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:06:35] 2025-10-13 07:06:34,909 | INFO     | traces error code: 0
[2025-10-13 03:06:35] 2025-10-13 07:06:34,909 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:06:35] 2025-10-13 07:06:35,156 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:06:35] 2025-10-13 07:06:35,210 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:06:35] 2025-10-13 07:06:35,225 [wrapper] pilotpid: 185761
[2025-10-13 03:06:35] 2025-10-13 07:06:35,241 [wrapper] Pilot exit status: 0
[2025-10-13 03:06:35] 2025-10-13 07:06:35,296 [wrapper] pandaids: 6840850897
[2025-10-13 03:06:35] 2025-10-13 07:06:35,403 [wrapper] cleanup supervisor_pilot  961730 185762
[2025-10-13 03:06:35] 2025-10-13 07:06:35,407 [wrapper] Test setup, not cleaning
[2025-10-13 03:06:35] 2025-10-13 07:06:35,409 [wrapper] apfmon messages muted
[2025-10-13 03:06:35] 2025-10-13 07:06:35,412 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:06:35] 2025-10-13 07:06:35,415 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:06:35]  *** Error codes and diagnostics ***
[2025-10-13 03:06:35]     "exeErrorCode": 0,
[2025-10-13 03:06:35]     "exeErrorDiag": "",
[2025-10-13 03:06:35]     "pilotErrorCode": 0,
[2025-10-13 03:06:35]     "pilotErrorDiag": "",
[2025-10-13 03:06:35]  *** Listing of results directory ***
[2025-10-13 03:06:35] total 404708
[2025-10-13 03:06:35] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 17:57 pilot3.tar.gz
[2025-10-13 03:06:35] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 18:15 queuedata.json
[2025-10-13 03:06:35] -rwx------. 1 boincer umatlas     36292 Oct 12 18:15 runpilot2-wrapper.sh
[2025-10-13 03:06:35] -rw-r--r--. 1 boincer umatlas       100 Oct 12 23:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:06:35] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 23:12 run_atlas
[2025-10-13 03:06:35] -rw-r--r--. 1 boincer umatlas       105 Oct 12 23:12 job.xml
[2025-10-13 03:06:35] -rw-r--r--. 2 boincer umatlas 220014483 Oct 12 23:12 EVNT.46676267._004605.pool.root.1
[2025-10-13 03:06:35] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 23:12 start_atlas.sh
[2025-10-13 03:06:35] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 23:12 shared
[2025-10-13 03:06:35] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 23:12 input.tar.gz
[2025-10-13 03:06:35] -rw-r--r--. 1 boincer umatlas         0 Oct 12 23:12 boinc_lockfile
[2025-10-13 03:06:35] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 23:12 pandaJob.out
[2025-10-13 03:06:35] -rw-------. 1 boincer umatlas    974373 Oct 12 23:14 agis_schedconf.cvmfs.json
[2025-10-13 03:06:35] drwx------. 5 boincer umatlas      4096 Oct 12 23:14 pilot3
[2025-10-13 03:06:35] -rw-r--r--. 1 boincer umatlas      6857 Oct 13 03:00 init_data.xml
[2025-10-13 03:06:35] -rw-------. 1 boincer umatlas 186180521 Oct 13 03:04 HITS.46676269._090845.pool.root.1
[2025-10-13 03:06:35] -rw-r--r--. 1 boincer umatlas       531 Oct 13 03:04 boinc_task_state.xml
[2025-10-13 03:06:35] -rw-------. 1 boincer umatlas      1045 Oct 13 03:05 memory_monitor_summary.json
[2025-10-13 03:06:35] -rw-------. 1 boincer umatlas   1560580 Oct 13 03:05 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:06:35] -rw-------. 1 boincer umatlas    454028 Oct 13 03:05 log.46676269._090845.job.log.tgz.1
[2025-10-13 03:06:35] -rw-------. 1 boincer umatlas      7841 Oct 13 03:05 heartbeat.json
[2025-10-13 03:06:35] -rw-------. 1 boincer umatlas        95 Oct 13 03:06 pilot_heartbeat.json
[2025-10-13 03:06:35] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 03:06 boinc_mmap_file
[2025-10-13 03:06:35] -rw-r--r--. 1 boincer umatlas        28 Oct 13 03:06 wrapper_checkpoint.txt
[2025-10-13 03:06:35] -rw-------. 1 boincer umatlas      4823 Oct 13 03:06 pilotlog.txt
[2025-10-13 03:06:35] -rw-------. 1 boincer umatlas   1709238 Oct 13 03:06 log.46676269._090845.job.log.1
[2025-10-13 03:06:35] -rw-------. 1 boincer umatlas       357 Oct 13 03:06 output.list
[2025-10-13 03:06:35] -rw-r--r--. 1 boincer umatlas       620 Oct 13 03:06 runtime_log
[2025-10-13 03:06:35] -rw-------. 1 boincer umatlas   2181120 Oct 13 03:06 result.tar.gz
[2025-10-13 03:06:35] -rw-r--r--. 1 boincer umatlas      8709 Oct 13 03:06 runtime_log.err
[2025-10-13 03:06:35] -rw-------. 1 boincer umatlas       656 Oct 13 03:06 k26MDmfWJS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKplNDm32Dd7m.diag
[2025-10-13 03:06:35] -rw-r--r--. 1 boincer umatlas     21006 Oct 13 03:06 stderr.txt
[2025-10-13 03:06:35] HITS file was successfully produced:
[2025-10-13 03:06:35] -rw-------. 1 boincer umatlas 186180521 Oct 13 03:04 shared/HITS.pool.root.1
[2025-10-13 03:06:35]  *** Contents of shared directory: ***
[2025-10-13 03:06:35] total 399392
[2025-10-13 03:06:35] -rw-r--r--. 2 boincer umatlas 220014483 Oct 12 23:12 ATLAS.root_0
[2025-10-13 03:06:35] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 23:12 start_atlas.sh
[2025-10-13 03:06:35] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 23:12 input.tar.gz
[2025-10-13 03:06:35] -rw-------. 1 boincer umatlas 186180521 Oct 13 03:04 HITS.pool.root.1
[2025-10-13 03:06:35] -rw-------. 1 boincer umatlas   2181120 Oct 13 03:06 result.tar.gz
03:06:36 (178810): run_atlas exited; CPU time 42673.369104
03:06:36 (178810): called boinc_finish(0)

</stderr_txt>
]]>

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