Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:25:59 (110260): wrapper (7.7.26015): starting
14:25:59 (110260): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 14:25:59] Arguments: --nthreads 3
[2025-10-13 14:25:59] Threads: 3
[2025-10-13 14:25:59] Checking for CVMFS
[2025-10-13 14:25:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 14:25:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 14:25:59] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 14:25:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 14:25:59] 2.9.2.0 2646070 5845 72104 151661 2 56 29124198 36864000 0 130560 0 4340516 99.991 198612 887 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 14:25:59] CVMFS is ok
[2025-10-13 14:25:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 14:25:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 14:25:59] Further information can be found at the LHC@home message board.
[2025-10-13 14:25:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 14:25:59] Checking for apptainer binary...
[2025-10-13 14:25:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 14:25:59] Running /usr/bin/apptainer --version
[2025-10-13 14:25:59] apptainer version 1.4.1-1.1
[2025-10-13 14:25:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 14:25:59] cosA133a
[2025-10-13 14:25:59] apptainer works
[2025-10-13 14:25:59] Set ATHENA_PROC_NUMBER=3
[2025-10-13 14:25:59] Set ATHENA_CORE_NUMBER=3
[2025-10-13 14:25:59] Starting ATLAS job with PandaID=6840532028
[2025-10-13 14:25:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 15:56:40]  *** The last 200 lines of the pilot log: ***
[2025-10-13 15:56:40]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6840532028/log.46676269._086049.job.log.tgz.1
[2025-10-13 15:56:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/10/47/log.46676269._086049.job.log.tgz.1
[2025-10-13 15:56:40]  workdir=None
[2025-10-13 15:56:40] ]
[2025-10-13 15:56:40] 2025-10-13 13:55:57,613 | INFO     | transferring file log.46676269._086049.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6840532028/log.46676269._086049.job.log.tgz.1 to /local/data/boinc/
[2025-10-13 15:56:40] 2025-10-13 13:55:57,613 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6840532028/log.46676269._086049.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0860
[2025-10-13 15:56:40] 2025-10-13 13:55:57,625 | INFO     | adding to output.list: log.46676269._086049.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/10/47/log.46676269._086049.job.log.tg
[2025-10-13 15:56:40] 2025-10-13 13:55:57,626 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 15:56:40] 2025-10-13 13:55:57,626 | INFO     | summary of transferred files:
[2025-10-13 15:56:40] 2025-10-13 13:55:57,626 | INFO     |  -- lfn=log.46676269._086049.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 15:56:40] 2025-10-13 13:55:57,626 | INFO     | stage-out finished correctly
[2025-10-13 15:56:40] 2025-10-13 13:55:57,905 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 15:56:40] 2025-10-13 13:55:58,671 | INFO     | monitor loop #414: job 0:6840532028 is in state 'finished'
[2025-10-13 15:56:40] 2025-10-13 13:55:58,672 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 15:56:40] 2025-10-13 13:55:59,165 | INFO     | time since job start (5389s) is within the limit (172800.0s)
[2025-10-13 15:56:40] 2025-10-13 13:55:59,910 | INFO     | job 6840532028 has state=finished
[2025-10-13 15:56:40] 2025-10-13 13:55:59,910 | INFO     | preparing for final server update for job 6840532028 in state='finished'
[2025-10-13 15:56:40] 2025-10-13 13:55:59,911 | INFO     | this job has now completed (state=finished)
[2025-10-13 15:56:40] 2025-10-13 13:55:59,912 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 15:56:40] 2025-10-13 13:55:59,912 | INFO     | log transfer has been attempted: DONE
[2025-10-13 15:56:40] 2025-10-13 13:55:59,912 | INFO     | job 6840532028 has finished - writing final server update
[2025-10-13 15:56:40] 2025-10-13 13:55:59,913 | INFO     | total number of processed events: 400 (read)
[2025-10-13 15:56:40] 2025-10-13 13:55:59,914 | INFO     | executing command: lscpu
[2025-10-13 15:56:40] 2025-10-13 13:55:59,929 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 15:56:40] 2025-10-13 13:56:01,171 | INFO     | time since job start (5391s) is within the limit (172800.0s)
[2025-10-13 15:56:40] 2025-10-13 13:56:01,174 | INFO     | monitor loop #415: job 0:6840532028 is in state 'finished'
[2025-10-13 15:56:40] 2025-10-13 13:56:01,174 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 15:56:40] 2025-10-13 13:56:03,177 | INFO     | time since job start (5393s) is within the limit (172800.0s)
[2025-10-13 15:56:40] 2025-10-13 13:56:03,677 | INFO     | monitor loop #416: job 0:6840532028 is in state 'finished'
[2025-10-13 15:56:40] 2025-10-13 13:56:03,678 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 15:56:40] 2025-10-13 13:56:04,267 | INFO     | PID=113978 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 15:56:40] 2025-10-13 13:56:05,268 | INFO     | time since job start (5395s) is within the limit (172800.0s)
[2025-10-13 15:56:40] 2025-10-13 13:56:06,180 | INFO     | monitor loop #417: job 0:6840532028 is in state 'finished'
[2025-10-13 15:56:40] 2025-10-13 13:56:06,181 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 15:56:40] 2025-10-13 13:56:07,273 | INFO     | time since job start (5397s) is within the limit (172800.0s)
[2025-10-13 15:56:40] 2025-10-13 13:56:07,568 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 15:56:40] 2025-10-13 13:56:07,569 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 4360.356833333333
[2025-10-13 15:56:40] 2025-10-13 13:56:07,570 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6840532028/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 15:56:40] 2025-10-13 13:56:07,570 | INFO     | extracted standard info from prmon json
[2025-10-13 15:56:40] 2025-10-13 13:56:07,570 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 15:56:40] 2025-10-13 13:56:07,570 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 15:56:40] 2025-10-13 13:56:07,570 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 15:56:40] 2025-10-13 13:56:07,570 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 15:56:40] 2025-10-13 13:56:07,571 | INFO     | fitting pss+swap vs Time
[2025-10-13 15:56:40] 2025-10-13 13:56:07,571 | INFO     | sum of square deviations: 164765880.0
[2025-10-13 15:56:40] 2025-10-13 13:56:07,571 | INFO     | sum of deviations: -10841194622.0
[2025-10-13 15:56:40] 2025-10-13 13:56:07,572 | INFO     | mean x: 1760361141.0
[2025-10-13 15:56:40] 2025-10-13 13:56:07,572 | INFO     | mean y: 2476771.975308642
[2025-10-13 15:56:40] 2025-10-13 13:56:07,572 | INFO     | -- intersect: 115829963230.86462
[2025-10-13 15:56:40] 2025-10-13 13:56:07,572 | INFO     | intersect: 115829963230.86462
[2025-10-13 15:56:40] 2025-10-13 13:56:07,572 | INFO     | chi2: 0.04815028579415561
[2025-10-13 15:56:40] 2025-10-13 13:56:07,572 | INFO     | -- intersect: 115829963230.86462
[2025-10-13 15:56:40] 2025-10-13 13:56:07,572 | INFO     | current memory leak: -65.80 B/s (using 81 data points, chi2=0.05)
[2025-10-13 15:56:40] 2025-10-13 13:56:07,572 | INFO     | could have reported an average CPU frequency of 4281 MHz (6 samples)
[2025-10-13 15:56:40] 2025-10-13 13:56:07,572 | INFO     | ..............................
[2025-10-13 15:56:40] 2025-10-13 13:56:07,572 | INFO     | . Timing measurements:
[2025-10-13 15:56:40] 2025-10-13 13:56:07,572 | INFO     | . get job = 0 s
[2025-10-13 15:56:40] 2025-10-13 13:56:07,572 | INFO     | . initial setup = 1 s
[2025-10-13 15:56:40] 2025-10-13 13:56:07,572 | INFO     | . payload setup = 6 s
[2025-10-13 15:56:40] 2025-10-13 13:56:07,572 | INFO     | . stage-in = 0 s
[2025-10-13 15:56:40] 2025-10-13 13:56:07,572 | INFO     | . payload execution = 5360 s
[2025-10-13 15:56:40] 2025-10-13 13:56:07,572 | INFO     | . stage-out = 0 s
[2025-10-13 15:56:40] 2025-10-13 13:56:07,572 | INFO     | . log creation = 0 s
[2025-10-13 15:56:40] 2025-10-13 13:56:07,572 | INFO     | ..............................
[2025-10-13 15:56:40] 2025-10-13 13:56:07,743 | INFO     | 
[2025-10-13 15:56:40] 2025-10-13 13:56:07,744 | INFO     | job summary report
[2025-10-13 15:56:40] 2025-10-13 13:56:07,744 | INFO     | --------------------------------------------------
[2025-10-13 15:56:40] 2025-10-13 13:56:07,744 | INFO     | PanDA job id: 6840532028
[2025-10-13 15:56:40] 2025-10-13 13:56:07,744 | INFO     | task id: 46676269
[2025-10-13 15:56:40] 2025-10-13 13:56:07,744 | INFO     | errors: (none)
[2025-10-13 15:56:40] 2025-10-13 13:56:07,744 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 15:56:40] 2025-10-13 13:56:07,745 | INFO     | pilot state: finished 
[2025-10-13 15:56:40] 2025-10-13 13:56:07,745 | INFO     | transexitcode: 0
[2025-10-13 15:56:40] 2025-10-13 13:56:07,745 | INFO     | exeerrorcode: 0
[2025-10-13 15:56:40] 2025-10-13 13:56:07,745 | INFO     | exeerrordiag: 
[2025-10-13 15:56:40] 2025-10-13 13:56:07,745 | INFO     | exitcode: 0
[2025-10-13 15:56:40] 2025-10-13 13:56:07,745 | INFO     | exitmsg: OK
[2025-10-13 15:56:40] 2025-10-13 13:56:07,745 | INFO     | cpuconsumptiontime: 15486 s
[2025-10-13 15:56:40] 2025-10-13 13:56:07,745 | INFO     | nevents: 400
[2025-10-13 15:56:40] 2025-10-13 13:56:07,745 | INFO     | neventsw: 0
[2025-10-13 15:56:40] 2025-10-13 13:56:07,746 | INFO     | pid: 120418
[2025-10-13 15:56:40] 2025-10-13 13:56:07,746 | INFO     | pgrp: 120418
[2025-10-13 15:56:40] 2025-10-13 13:56:07,746 | INFO     | corecount: 3
[2025-10-13 15:56:40] 2025-10-13 13:56:07,746 | INFO     | event service: False
[2025-10-13 15:56:40] 2025-10-13 13:56:07,746 | INFO     | sizes: {0: 2348689, 1: 2348888, 7: 2349150, 11: 2349178, 5370: 2375801, 5371: 2384989, 5381: 2385127}
[2025-10-13 15:56:40] 2025-10-13 13:56:07,746 | INFO     | --------------------------------------------------
[2025-10-13 15:56:40] 2025-10-13 13:56:07,746 | INFO     | 
[2025-10-13 15:56:40] 2025-10-13 13:56:07,747 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-13 15:56:40] 2025-10-13 13:56:07,760 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 15:56:40] 2025-10-13 13:56:07,760 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 15:56:40] 2025-10-13 13:56:07,760 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 15:56:40] 2025-10-13 13:56:07,760 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 15:56:40] 2025-10-13 13:56:07,760 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 15:56:40] 2025-10-13 13:56:07,760 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 15:56:40] 2025-10-13 13:56:07,760 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 15:56:40] 2025-10-13 13:56:07,760 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 15:56:40] 2025-10-13 13:56:07,760 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 15:56:40] 2025-10-13 13:56:07,760 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 15:56:40] 2025-10-13 13:56:07,760 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 15:56:40] 2025-10-13 13:56:07,760 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 15:56:40] 2025-10-13 13:56:07,760 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 15:56:40] 2025-10-13 13:56:07,760 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 15:56:40] 2025-10-13 13:56:07,760 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 15:56:40] 2025-10-13 13:56:07,760 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 15:56:40] 2025-10-13 13:56:07,760 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 15:56:40] 2025-10-13 13:56:07,760 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 15:56:40] 2025-10-13 13:56:07,760 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 15:56:40] 2025-10-13 13:56:07,761 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 15:56:40] 2025-10-13 13:56:07,761 | INFO     | job 6840532028 has completed (purged errors)
[2025-10-13 15:56:40] 2025-10-13 13:56:07,761 | INFO     | overall cleanup function is called
[2025-10-13 15:56:40] 2025-10-13 13:56:08,767 | INFO     | --- collectZombieJob: --- 10, [120418]
[2025-10-13 15:56:40] 2025-10-13 13:56:08,767 | INFO     | zombie collector waiting for pid 120418
[2025-10-13 15:56:40] 2025-10-13 13:56:08,768 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 15:56:40] 2025-10-13 13:56:08,768 | INFO     | collected zombie processes
[2025-10-13 15:56:40] 2025-10-13 13:56:08,768 | INFO     | will attempt to kill all subprocesses of pid=120418
[2025-10-13 15:56:40] 2025-10-13 13:56:08,805 | INFO     | process IDs to be killed: [120418] (in reverse order)
[2025-10-13 15:56:40] 2025-10-13 13:56:08,830 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 15:56:40] 2025-10-13 13:56:08,830 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 15:56:40] 2025-10-13 13:56:08,831 | INFO     | did not find any defunct processes belonging to 120418
[2025-10-13 15:56:40] 2025-10-13 13:56:08,832 | INFO     | did not find any defunct processes belonging to 120418
[2025-10-13 15:56:40] 2025-10-13 13:56:08,832 | INFO     | ready for new job
[2025-10-13 15:56:40] 2025-10-13 13:56:08,832 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 15:56:40] 2025-10-13 13:56:08,833 | INFO     | ***************************************
[2025-10-13 15:56:40] 2025-10-13 13:56:08,833 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 15:56:40] 2025-10-13 13:56:08,833 | INFO     | ***************************************
[2025-10-13 15:56:40] 2025-10-13 13:56:08,833 | INFO     | 
[2025-10-13 15:56:40] 2025-10-13 13:56:08,833 | INFO     | architecture information:
[2025-10-13 15:56:40] 2025-10-13 13:56:08,833 | INFO     | executing command: cat /etc/os-release
[2025-10-13 15:56:40] 2025-10-13 13:56:08,842 | INFO     | cat /etc/os-release:
[2025-10-13 15:56:40] NAME="CentOS Linux"
[2025-10-13 15:56:40] VERSION="7 (Core)"
[2025-10-13 15:56:40] ID="centos"
[2025-10-13 15:56:40] ID_LIKE="rhel fedora"
[2025-10-13 15:56:40] VERSION_ID="7"
[2025-10-13 15:56:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 15:56:40] ANSI_COLOR="0;31"
[2025-10-13 15:56:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 15:56:40] HOME_URL="https://www.centos.org/"
[2025-10-13 15:56:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 15:56:40] 
[2025-10-13 15:56:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 15:56:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 15:56:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 15:56:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 15:56:40] 
[2025-10-13 15:56:40] 2025-10-13 13:56:08,842 | INFO     | ***************************************
[2025-10-13 15:56:40] 2025-10-13 13:56:09,195 [wrapper] supervise_pilot (15 min periods counter: 7)
[2025-10-13 15:56:40] 2025-10-13 13:56:09,346 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 15:56:40] 2025-10-13 13:56:09,359 | INFO     | sufficient remaining disk space (331379376128 B)
[2025-10-13 15:56:40] 2025-10-13 13:56:09,360 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 15:56:40] 2025-10-13 13:56:09,360 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 15:56:40] 2025-10-13 13:56:09,360 | INFO     | update_server=False
[2025-10-13 15:56:40] 2025-10-13 13:56:09,360 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 15:56:40] 2025-10-13 13:56:09,360 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 15:56:40] 2025-10-13 13:56:09,360 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 15:56:40] 2025-10-13 13:56:09,478 | INFO     | all data control threads have been joined
[2025-10-13 15:56:40] 2025-10-13 13:56:09,554 | INFO     | all payload control threads have been joined
[2025-10-13 15:56:40] 2025-10-13 13:56:09,690 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 15:56:40] 2025-10-13 13:56:09,690 | INFO     | aborting loop
[2025-10-13 15:56:40] 2025-10-13 13:56:10,170 | INFO     | all job control threads have been joined
[2025-10-13 15:56:40] 2025-10-13 13:56:10,365 | INFO     | [job] queue monitor thread has finished
[2025-10-13 15:56:40] 2025-10-13 13:56:10,366 | INFO     | [job] retrieve thread has finished
[2025-10-13 15:56:40] 2025-10-13 13:56:10,393 | INFO     | [payload] failed_post thread has finished
[2025-10-13 15:56:40] 2025-10-13 13:56:10,405 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 15:56:40] 2025-10-13 13:56:10,461 | INFO     | [job] validate thread has finished
[2025-10-13 15:56:40] 2025-10-13 13:56:10,484 | INFO     | [data] control thread has finished
[2025-10-13 15:56:40] 2025-10-13 13:56:10,529 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 15:56:40] 2025-10-13 13:56:10,560 | INFO     | [payload] control thread has finished
[2025-10-13 15:56:40] 2025-10-13 13:56:10,676 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 15:56:40] 2025-10-13 13:56:10,696 | INFO     | [job] job monitor thread has finished
[2025-10-13 15:56:40] 2025-10-13 13:56:10,708 | INFO     | [data] copytool_in thread has finished
[2025-10-13 15:56:40] 2025-10-13 13:56:10,751 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 15:56:40] 2025-10-13 13:56:11,176 | INFO     | [job] control thread has finished
[2025-10-13 15:56:40] 2025-10-13 13:56:11,537 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 15:56:40] 2025-10-13 13:56:11,682 | INFO     | [payload] validate_post thread has finished
[2025-10-13 15:56:40] 2025-10-13 13:56:12,682 | INFO     | [data] copytool_out thread has finished
[2025-10-13 15:56:40] 2025-10-13 13:56:13,367 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 15:56:40] 2025-10-13 13:56:18,911 | INFO     | [monitor] cgroup control has ended
[2025-10-13 15:56:40] 2025-10-13 13:56:20,366 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139739057502016)>', '<ExcThread(monitor, started 139738438694656)>']
[2025-10-13 15:56:40] 2025-10-13 13:56:25,391 | INFO     | all workflow threads have been joined
[2025-10-13 15:56:40] 2025-10-13 13:56:25,392 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 15:56:40] 2025-10-13 13:56:25,392 | INFO     | traces error code: 0
[2025-10-13 15:56:40] 2025-10-13 13:56:25,393 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 15:56:40] 2025-10-13 13:56:40,389 | INFO     | PID=113978 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 15:56:40] 2025-10-13 13:56:40,389 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 15:56:40] 2025-10-13 13:56:40,390 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 15:56:40] 2025-10-13 13:56:40,390 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 15:56:40] 2025-10-13 13:56:40,390 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 15:56:40] 2025-10-13 13:56:40,390 | CRITICAL | thread 'MainThread' is not alive
[2025-10-13 15:56:40] 2025-10-13 13:56:40,390 | INFO     | [monitor] control thread has ended
[2025-10-13 15:56:40] 2025-10-13 13:56:40,433 [wrapper] ==== pilot stdout END ====
[2025-10-13 15:56:40] 2025-10-13 13:56:40,436 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 15:56:40] 2025-10-13 13:56:40,438 [wrapper] pilotpid: 113978
[2025-10-13 15:56:40] 2025-10-13 13:56:40,441 [wrapper] Pilot exit status: 0
[2025-10-13 15:56:40] 2025-10-13 13:56:40,448 [wrapper] pandaids: 6840532028
[2025-10-13 15:56:40] 2025-10-13 13:56:40,463 [wrapper] cleanup supervisor_pilot  134914 113979
[2025-10-13 15:56:40] 2025-10-13 13:56:40,466 [wrapper] Test setup, not cleaning
[2025-10-13 15:56:40] 2025-10-13 13:56:40,469 [wrapper] apfmon messages muted
[2025-10-13 15:56:40] 2025-10-13 13:56:40,471 [wrapper] ==== wrapper stdout END ====
[2025-10-13 15:56:40] 2025-10-13 13:56:40,474 [wrapper] ==== wrapper stderr END ====
[2025-10-13 15:56:40]  *** Error codes and diagnostics ***
[2025-10-13 15:56:40]     "exeErrorCode": 0,
[2025-10-13 15:56:40]     "exeErrorDiag": "",
[2025-10-13 15:56:40]     "pilotErrorCode": 0,
[2025-10-13 15:56:40]     "pilotErrorDiag": "",
[2025-10-13 15:56:40]  *** Listing of results directory ***
[2025-10-13 15:56:40] total 407456
[2025-10-13 15:56:40] -rw-r--r-- 1 boinc boinc    557409 Oct 12 20:20 pilot3.tar.gz
[2025-10-13 15:56:40] -rwx------ 1 boinc boinc     36292 Oct 12 20:25 runpilot2-wrapper.sh
[2025-10-13 15:56:40] -rw-r--r-- 1 boinc boinc      5112 Oct 12 20:25 queuedata.json
[2025-10-13 15:56:40] -rw-r--r-- 1 boinc boinc       100 Oct 13 14:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 15:56:40] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 14:25 run_atlas
[2025-10-13 15:56:40] -rw-r--r-- 1 boinc boinc       105 Oct 13 14:25 job.xml
[2025-10-13 15:56:40] -rw-r--r-- 2 boinc boinc 219235834 Oct 13 14:25 EVNT.46676267._004402.pool.root.1
[2025-10-13 15:56:40] -rw-r--r-- 2 boinc boinc    569680 Oct 13 14:25 input.tar.gz
[2025-10-13 15:56:40] -rw-r--r-- 2 boinc boinc     15120 Oct 13 14:25 start_atlas.sh
[2025-10-13 15:56:40] drwxrwx--x 2 boinc boinc      4096 Oct 13 14:25 shared
[2025-10-13 15:56:40] -rw-r--r-- 1 boinc boinc         0 Oct 13 14:25 boinc_setup_complete
[2025-10-13 15:56:40] -rw-r--r-- 1 boinc boinc      6200 Oct 13 14:25 init_data.xml
[2025-10-13 15:56:40] -rw-r--r-- 1 boinc boinc         0 Oct 13 14:25 boinc_lockfile
[2025-10-13 15:56:40] -rw-r--r-- 1 boinc boinc      2550 Oct 13 14:25 pandaJob.out
[2025-10-13 15:56:40] -rw------- 1 boinc boinc    972497 Oct 13 14:26 agis_schedconf.cvmfs.json
[2025-10-13 15:56:40] -rw------- 1 boinc boinc   1560580 Oct 13 14:26 agis_ddmendpoints.agis.ALL.json
[2025-10-13 15:56:40] drwx------ 5 boinc boinc      4096 Oct 13 14:26 pilot3
[2025-10-13 15:56:40] -rw------- 1 boinc boinc 192032688 Oct 13 15:55 HITS.46676269._086049.pool.root.1
[2025-10-13 15:56:40] -rw-r--r-- 1 boinc boinc       529 Oct 13 15:55 boinc_task_state.xml
[2025-10-13 15:56:40] -rw------- 1 boinc boinc      1017 Oct 13 15:55 memory_monitor_summary.json
[2025-10-13 15:56:40] -rw------- 1 boinc boinc    246707 Oct 13 15:55 log.46676269._086049.job.log.tgz.1
[2025-10-13 15:56:40] -rw------- 1 boinc boinc      7764 Oct 13 15:56 heartbeat.json
[2025-10-13 15:56:40] -rw-r--r-- 1 boinc boinc      8192 Oct 13 15:56 boinc_mmap_file
[2025-10-13 15:56:40] -rw-r--r-- 1 boinc boinc        27 Oct 13 15:56 wrapper_checkpoint.txt
[2025-10-13 15:56:40] -rw------- 1 boinc boinc       816 Oct 13 15:56 pilotlog.txt
[2025-10-13 15:56:40] -rw------- 1 boinc boinc        95 Oct 13 15:56 pilot_heartbeat.json
[2025-10-13 15:56:40] -rw------- 1 boinc boinc    786430 Oct 13 15:56 log.46676269._086049.job.log.1
[2025-10-13 15:56:40] -rw------- 1 boinc boinc       357 Oct 13 15:56 output.list
[2025-10-13 15:56:40] -rw-r--r-- 1 boinc boinc       620 Oct 13 15:56 runtime_log
[2025-10-13 15:56:40] -rw------- 1 boinc boinc   1054720 Oct 13 15:56 result.tar.gz
[2025-10-13 15:56:40] -rw-r--r-- 1 boinc boinc      8787 Oct 13 15:56 runtime_log.err
[2025-10-13 15:56:40] -rw------- 1 boinc boinc       660 Oct 13 15:56 h9mKDmOwFS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm72kNDmVukecm.diag
[2025-10-13 15:56:40] -rw-r--r-- 1 boinc boinc     22321 Oct 13 15:56 stderr.txt
[2025-10-13 15:56:40] HITS file was successfully produced:
[2025-10-13 15:56:40] -rw------- 1 boinc boinc 192032688 Oct 13 15:55 shared/HITS.pool.root.1
[2025-10-13 15:56:40]  *** Contents of shared directory: ***
[2025-10-13 15:56:40] total 403248
[2025-10-13 15:56:40] -rw-r--r-- 2 boinc boinc 219235834 Oct 13 14:25 ATLAS.root_0
[2025-10-13 15:56:40] -rw-r--r-- 2 boinc boinc    569680 Oct 13 14:25 input.tar.gz
[2025-10-13 15:56:40] -rw-r--r-- 2 boinc boinc     15120 Oct 13 14:25 start_atlas.sh
[2025-10-13 15:56:40] -rw------- 1 boinc boinc 192032688 Oct 13 15:55 HITS.pool.root.1
[2025-10-13 15:56:40] -rw------- 1 boinc boinc   1054720 Oct 13 15:56 result.tar.gz
15:56:41 (110260): run_atlas exited; CPU time 15512.447518
15:56:41 (110260): called boinc_finish(0)

</stderr_txt>
]]>

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