Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
06:36:02 (2450897): wrapper (7.7.26015): starting
06:36:02 (2450897): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 06:36:02] Arguments: --nthreads 12
[2025-10-13 06:36:02] Threads: 12
[2025-10-13 06:36:02] Checking for CVMFS
[2025-10-13 06:36:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 06:36:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 06:36:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 06:36:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 06:36:02] 2.13.0.0 2427267 45 51240 151649 2 57 5597552 6144001 0 130560 0 69919 99.974 5363 5511 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-13 06:36:02] CVMFS is ok
[2025-10-13 06:36:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 06:36:02] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-13 06:36:02] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-13 06:36:02] Further information can be found at the LHC@home message board.
[2025-10-13 06:36:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:36:02] Checking for apptainer binary...
[2025-10-13 06:36:02] apptainer is not installed, using version from CVMFS
[2025-10-13 06:36:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:36:02] Debian-bookworm-latest-amd64-base
[2025-10-13 06:36:02] apptainer works
[2025-10-13 06:36:02] Set ATHENA_PROC_NUMBER=12
[2025-10-13 06:36:02] Set ATHENA_CORE_NUMBER=12
[2025-10-13 06:36:02] Starting ATLAS job with PandaID=6840850747
[2025-10-13 06:36:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:22:18]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:22:18]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 07:22:18]  replicas=None
[2025-10-13 07:22:18]  scope=mc23_13p6TeV
[2025-10-13 07:22:18]  status=None
[2025-10-13 07:22:18]  status_code=0
[2025-10-13 07:22:18]  storage_token=
[2025-10-13 07:22:18]  surl=/var/lib/boinc-client/slots/13/PanDA_Pilot-6840850747/log.46676269._090695.job.log.tgz.1
[2025-10-13 07:22:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3e/48/log.46676269._090695.job.log.tgz.1
[2025-10-13 07:22:18]  workdir=None
[2025-10-13 07:22:18] ]
[2025-10-13 07:22:18] 2025-10-13 05:21:16,850 | INFO     | transferring file log.46676269._090695.job.log.tgz.1 from /var/lib/boinc-client/slots/13/PanDA_Pilot-6840850747/log.46676269._090695.job.log.tgz.1 to /var/lib/boin
[2025-10-13 07:22:18] 2025-10-13 05:21:16,850 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/13/PanDA_Pilot-6840850747/log.46676269._090695.job.log.tgz.1 /var/lib/boinc-client/slots/13/log.4667
[2025-10-13 07:22:18] 2025-10-13 05:21:16,875 | INFO     | adding to output.list: log.46676269._090695.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3e/48/log.46676269._090695.job.log.tg
[2025-10-13 07:22:18] 2025-10-13 05:21:16,876 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 07:22:18] 2025-10-13 05:21:16,876 | INFO     | summary of transferred files:
[2025-10-13 07:22:18] 2025-10-13 05:21:16,876 | INFO     |  -- lfn=log.46676269._090695.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 07:22:18] 2025-10-13 05:21:16,876 | INFO     | stage-out finished correctly
[2025-10-13 07:22:18] 2025-10-13 05:21:17,545 | INFO     | monitor loop #207: job 0:6840850747 is in state 'finished'
[2025-10-13 07:22:18] 2025-10-13 05:21:17,546 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 07:22:18] 2025-10-13 05:21:17,626 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 07:22:18] 2025-10-13 05:21:18,450 | INFO     | time since job start (2711s) is within the limit (172800.0s)
[2025-10-13 07:22:18] 2025-10-13 05:21:19,461 | INFO     | job 6840850747 has state=finished
[2025-10-13 07:22:18] 2025-10-13 05:21:19,462 | INFO     | preparing for final server update for job 6840850747 in state='finished'
[2025-10-13 07:22:18] 2025-10-13 05:21:19,462 | INFO     | this job has now completed (state=finished)
[2025-10-13 07:22:18] 2025-10-13 05:21:19,462 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 07:22:18] 2025-10-13 05:21:19,462 | INFO     | log transfer has been attempted: DONE
[2025-10-13 07:22:18] 2025-10-13 05:21:19,462 | INFO     | job 6840850747 has finished - writing final server update
[2025-10-13 07:22:18] 2025-10-13 05:21:19,462 | INFO     | total number of processed events: 400 (read)
[2025-10-13 07:22:18] 2025-10-13 05:21:19,463 | INFO     | executing command: lscpu
[2025-10-13 07:22:18] 2025-10-13 05:21:19,485 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 07:22:18] 2025-10-13 05:21:20,049 | INFO     | monitor loop #208: job 0:6840850747 is in state 'finished'
[2025-10-13 07:22:18] 2025-10-13 05:21:20,049 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 07:22:18] 2025-10-13 05:21:20,455 | INFO     | time since job start (2713s) is within the limit (172800.0s)
[2025-10-13 07:22:18] 2025-10-13 05:21:22,458 | INFO     | time since job start (2715s) is within the limit (172800.0s)
[2025-10-13 07:22:18] 2025-10-13 05:21:22,549 | INFO     | monitor loop #209: job 0:6840850747 is in state 'finished'
[2025-10-13 07:22:18] 2025-10-13 05:21:22,550 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 07:22:18] 2025-10-13 05:21:24,116 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 07:22:18] 2025-10-13 05:21:24,117 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3744.8471875
[2025-10-13 07:22:18] 2025-10-13 05:21:24,119 | INFO     | using path: /var/lib/boinc-client/slots/13/PanDA_Pilot-6840850747/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 07:22:18] 2025-10-13 05:21:24,119 | INFO     | extracted standard info from prmon json
[2025-10-13 07:22:18] 2025-10-13 05:21:24,119 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 07:22:18] 2025-10-13 05:21:24,119 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 07:22:18] 2025-10-13 05:21:24,120 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 07:22:18] 2025-10-13 05:21:24,120 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 07:22:18] 2025-10-13 05:21:24,120 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:22:18] 2025-10-13 05:21:24,120 | INFO     | sum of square deviations: 17003109.5
[2025-10-13 07:22:18] 2025-10-13 05:21:24,120 | INFO     | sum of deviations: -1798396693.0
[2025-10-13 07:22:18] 2025-10-13 05:21:24,120 | INFO     | mean x: 1760331619.5
[2025-10-13 07:22:18] 2025-10-13 05:21:24,120 | INFO     | mean y: 3102857.1578947366
[2025-10-13 07:22:18] 2025-10-13 05:21:24,121 | INFO     | -- intersect: 186191080008.7568
[2025-10-13 07:22:18] 2025-10-13 05:21:24,121 | INFO     | intersect: 186191080008.7568
[2025-10-13 07:22:18] 2025-10-13 05:21:24,121 | INFO     | chi2: 0.06133312313471883
[2025-10-13 07:22:18] 2025-10-13 05:21:24,121 | INFO     | -- intersect: 186191080008.7568
[2025-10-13 07:22:18] 2025-10-13 05:21:24,121 | INFO     | current memory leak: -105.77 B/s (using 38 data points, chi2=0.06)
[2025-10-13 07:22:18] 2025-10-13 05:21:24,121 | INFO     | could have reported an average CPU frequency of 3883 MHz (5 samples)
[2025-10-13 07:22:18] 2025-10-13 05:21:24,121 | INFO     | ..............................
[2025-10-13 07:22:18] 2025-10-13 05:21:24,121 | INFO     | . Timing measurements:
[2025-10-13 07:22:18] 2025-10-13 05:21:24,121 | INFO     | . get job = 0 s
[2025-10-13 07:22:18] 2025-10-13 05:21:24,121 | INFO     | . initial setup = 1 s
[2025-10-13 07:22:18] 2025-10-13 05:21:24,121 | INFO     | . payload setup = 2 s
[2025-10-13 07:22:18] 2025-10-13 05:21:24,121 | INFO     | . stage-in = 0 s
[2025-10-13 07:22:18] 2025-10-13 05:21:24,121 | INFO     | . payload execution = 2689 s
[2025-10-13 07:22:18] 2025-10-13 05:21:24,121 | INFO     | . stage-out = 0 s
[2025-10-13 07:22:18] 2025-10-13 05:21:24,121 | INFO     | . log creation = 0 s
[2025-10-13 07:22:18] 2025-10-13 05:21:24,121 | INFO     | ..............................
[2025-10-13 07:22:18] 2025-10-13 05:21:24,263 | INFO     | 
[2025-10-13 07:22:18] 2025-10-13 05:21:24,263 | INFO     | job summary report
[2025-10-13 07:22:18] 2025-10-13 05:21:24,263 | INFO     | --------------------------------------------------
[2025-10-13 07:22:18] 2025-10-13 05:21:24,263 | INFO     | PanDA job id: 6840850747
[2025-10-13 07:22:18] 2025-10-13 05:21:24,263 | INFO     | task id: 46676269
[2025-10-13 07:22:18] 2025-10-13 05:21:24,263 | INFO     | errors: (none)
[2025-10-13 07:22:18] 2025-10-13 05:21:24,263 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:22:18] 2025-10-13 05:21:24,263 | INFO     | pilot state: finished 
[2025-10-13 07:22:18] 2025-10-13 05:21:24,263 | INFO     | transexitcode: 0
[2025-10-13 07:22:18] 2025-10-13 05:21:24,264 | INFO     | exeerrorcode: 0
[2025-10-13 07:22:18] 2025-10-13 05:21:24,264 | INFO     | exeerrordiag: 
[2025-10-13 07:22:18] 2025-10-13 05:21:24,264 | INFO     | exitcode: 0
[2025-10-13 07:22:18] 2025-10-13 05:21:24,264 | INFO     | exitmsg: OK
[2025-10-13 07:22:18] 2025-10-13 05:21:24,264 | INFO     | cpuconsumptiontime: 29181 s
[2025-10-13 07:22:18] 2025-10-13 05:21:24,264 | INFO     | nevents: 400
[2025-10-13 07:22:18] 2025-10-13 05:21:24,264 | INFO     | neventsw: 0
[2025-10-13 07:22:18] 2025-10-13 05:21:24,264 | INFO     | pid: 2461533
[2025-10-13 07:22:18] 2025-10-13 05:21:24,264 | INFO     | pgrp: 2461533
[2025-10-13 07:22:18] 2025-10-13 05:21:24,264 | INFO     | corecount: 12
[2025-10-13 07:22:18] 2025-10-13 05:21:24,264 | INFO     | event service: False
[2025-10-13 07:22:18] 2025-10-13 05:21:24,264 | INFO     | sizes: {0: 2348694, 1: 2348893, 3: 2349155, 11: 2349183, 2696: 2383563, 2697: 2383563, 2704: 2383917}
[2025-10-13 07:22:18] 2025-10-13 05:21:24,264 | INFO     | --------------------------------------------------
[2025-10-13 07:22:18] 2025-10-13 05:21:24,264 | INFO     | 
[2025-10-13 07:22:18] 2025-10-13 05:21:24,264 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/13
[2025-10-13 07:22:18] 2025-10-13 05:21:24,277 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:22:18] 2025-10-13 05:21:24,277 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:22:18] 2025-10-13 05:21:24,277 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:22:18] 2025-10-13 05:21:24,277 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:22:18] 2025-10-13 05:21:24,277 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:22:18] 2025-10-13 05:21:24,277 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:22:18] 2025-10-13 05:21:24,277 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:22:18] 2025-10-13 05:21:24,277 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:22:18] 2025-10-13 05:21:24,277 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:22:18] 2025-10-13 05:21:24,277 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:22:18] 2025-10-13 05:21:24,277 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:22:18] 2025-10-13 05:21:24,277 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:22:18] 2025-10-13 05:21:24,277 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:22:18] 2025-10-13 05:21:24,278 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:22:18] 2025-10-13 05:21:24,278 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:22:18] 2025-10-13 05:21:24,278 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:22:18] 2025-10-13 05:21:24,278 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:22:18] 2025-10-13 05:21:24,278 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:22:18] 2025-10-13 05:21:24,278 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:22:18] 2025-10-13 05:21:24,278 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:22:18] 2025-10-13 05:21:24,278 | INFO     | job 6840850747 has completed (purged errors)
[2025-10-13 07:22:18] 2025-10-13 05:21:24,278 | INFO     | overall cleanup function is called
[2025-10-13 07:22:18] 2025-10-13 05:21:25,285 | INFO     | --- collectZombieJob: --- 10, [2461533]
[2025-10-13 07:22:18] 2025-10-13 05:21:25,285 | INFO     | zombie collector waiting for pid 2461533
[2025-10-13 07:22:18] 2025-10-13 05:21:25,285 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:22:18] 2025-10-13 05:21:25,286 | INFO     | collected zombie processes
[2025-10-13 07:22:18] 2025-10-13 05:21:25,286 | INFO     | will attempt to kill all subprocesses of pid=2461533
[2025-10-13 07:22:18] 2025-10-13 05:21:25,327 | INFO     | process IDs to be killed: [2461533] (in reverse order)
[2025-10-13 07:22:18] 2025-10-13 05:21:25,350 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:22:18] 2025-10-13 05:21:25,350 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:22:18] 2025-10-13 05:21:25,351 | INFO     | did not find any defunct processes belonging to 2461533
[2025-10-13 07:22:18] 2025-10-13 05:21:25,352 | INFO     | did not find any defunct processes belonging to 2461533
[2025-10-13 07:22:18] 2025-10-13 05:21:25,352 | INFO     | ready for new job
[2025-10-13 07:22:18] 2025-10-13 05:21:25,352 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:22:18] 2025-10-13 05:21:25,353 | INFO     | ***************************************
[2025-10-13 07:22:18] 2025-10-13 05:21:25,353 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:22:18] 2025-10-13 05:21:25,353 | INFO     | ***************************************
[2025-10-13 07:22:18] 2025-10-13 05:21:25,353 | INFO     | 
[2025-10-13 07:22:18] 2025-10-13 05:21:25,354 | INFO     | architecture information:
[2025-10-13 07:22:18] 2025-10-13 05:21:25,354 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:22:18] 2025-10-13 05:21:25,363 | INFO     | cat /etc/os-release:
[2025-10-13 07:22:18] NAME="CentOS Linux"
[2025-10-13 07:22:18] VERSION="7 (Core)"
[2025-10-13 07:22:18] ID="centos"
[2025-10-13 07:22:18] ID_LIKE="rhel fedora"
[2025-10-13 07:22:18] VERSION_ID="7"
[2025-10-13 07:22:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:22:18] ANSI_COLOR="0;31"
[2025-10-13 07:22:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:22:18] HOME_URL="https://www.centos.org/"
[2025-10-13 07:22:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:22:18] 
[2025-10-13 07:22:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:22:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:22:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:22:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:22:18] 
[2025-10-13 07:22:18] 2025-10-13 05:21:25,363 | INFO     | ***************************************
[2025-10-13 07:22:18] 2025-10-13 05:21:25,866 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/13
[2025-10-13 07:22:18] 2025-10-13 05:21:25,880 | INFO     | sufficient remaining disk space (800779665408 B)
[2025-10-13 07:22:18] 2025-10-13 05:21:25,880 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:22:18] 2025-10-13 05:21:25,881 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:22:18] 2025-10-13 05:21:25,881 | INFO     | update_server=False
[2025-10-13 07:22:18] 2025-10-13 05:21:25,881 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:22:18] 2025-10-13 05:21:25,881 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:22:18] 2025-10-13 05:21:25,881 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:22:18] 2025-10-13 05:21:26,057 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:22:18] 2025-10-13 05:21:26,058 | INFO     | aborting loop
[2025-10-13 07:22:18] 2025-10-13 05:21:26,170 | INFO     | all data control threads have been joined
[2025-10-13 07:22:18] 2025-10-13 05:21:26,454 | INFO     | all payload control threads have been joined
[2025-10-13 07:22:18] 2025-10-13 05:21:26,886 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:22:18] 2025-10-13 05:21:26,886 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:22:18] 2025-10-13 05:21:27,036 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:22:18] 2025-10-13 05:21:27,063 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:22:18] 2025-10-13 05:21:27,121 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:22:18] 2025-10-13 05:21:27,173 | INFO     | [data] control thread has finished
[2025-10-13 07:22:18] 2025-10-13 05:21:27,449 | INFO     | all job control threads have been joined
[2025-10-13 07:22:18] 2025-10-13 05:21:27,459 | INFO     | [payload] control thread has finished
[2025-10-13 07:22:18] 2025-10-13 05:21:27,537 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:22:18] 2025-10-13 05:21:27,704 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:22:18] 2025-10-13 05:21:27,793 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:22:18] 2025-10-13 05:21:27,886 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:22:18] 2025-10-13 05:21:28,172 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:22:18] 2025-10-13 05:21:28,209 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:22:18] 2025-10-13 05:21:28,351 | INFO     | [job] validate thread has finished
[2025-10-13 07:22:18] 2025-10-13 05:21:28,454 | INFO     | [job] control thread has finished
[2025-10-13 07:22:18] 2025-10-13 05:21:32,178 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:22:18] 2025-10-13 05:21:36,496 | INFO     | job.realtimelogging is not enabled
[2025-10-13 07:22:18] 2025-10-13 05:21:37,502 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:22:18] 2025-10-13 05:21:55,570 | INFO     | PID=2454763 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 07:22:18] 2025-10-13 05:21:55,581 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:22:18] 2025-10-13 05:21:55,581 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:22:18] 2025-10-13 05:21:55,581 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:22:18] 2025-10-13 05:22:11,751 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:22:18] 2025-10-13 05:22:13,316 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139855403382592)>', '<ExcThread(monitor, started 139854738355968)>']
[2025-10-13 07:22:18] 2025-10-13 05:22:13,670 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:22:18] 2025-10-13 05:22:13,670 | INFO     | [monitor] control thread has ended
[2025-10-13 07:22:18] 2025-10-13 05:22:18,341 | INFO     | all workflow threads have been joined
[2025-10-13 07:22:18] 2025-10-13 05:22:18,341 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:22:18] 2025-10-13 05:22:18,341 | INFO     | traces error code: 0
[2025-10-13 07:22:18] 2025-10-13 05:22:18,341 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:22:18] 2025-10-13 05:22:18,407 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:22:18] 2025-10-13 05:22:18,408 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:22:18] 2025-10-13 05:22:18,410 [wrapper] pilotpid: 2454763
[2025-10-13 07:22:18] 2025-10-13 05:22:18,411 [wrapper] Pilot exit status: 0
[2025-10-13 07:22:18] 2025-10-13 05:22:18,416 [wrapper] pandaids: 6840850747
[2025-10-13 07:22:18] 2025-10-13 05:22:18,429 [wrapper] cleanup supervisor_pilot 2471642 2454764
[2025-10-13 07:22:18] 2025-10-13 05:22:18,430 [wrapper] Test setup, not cleaning
[2025-10-13 07:22:18] 2025-10-13 05:22:18,431 [wrapper] apfmon messages muted
[2025-10-13 07:22:18] 2025-10-13 05:22:18,433 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:22:18] 2025-10-13 05:22:18,434 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:22:18]  *** Error codes and diagnostics ***
[2025-10-13 07:22:18]     "exeErrorCode": 0,
[2025-10-13 07:22:18]     "exeErrorDiag": "",
[2025-10-13 07:22:18]     "pilotErrorCode": 0,
[2025-10-13 07:22:18]     "pilotErrorDiag": "",
[2025-10-13 07:22:18]  *** Listing of results directory ***
[2025-10-13 07:22:18] total 409752
[2025-10-13 07:22:18] -rw-r--r-- 1 boinc boinc    557409 Oct 12 23:57 pilot3.tar.gz
[2025-10-13 07:22:18] -rw-r--r-- 1 boinc boinc      5112 Oct 13 00:03 queuedata.json
[2025-10-13 07:22:18] -rwx------ 1 boinc boinc     36292 Oct 13 00:04 runpilot2-wrapper.sh
[2025-10-13 07:22:18] -rw-r--r-- 1 boinc boinc       100 Oct 13 06:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:22:18] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 06:36 run_atlas
[2025-10-13 07:22:18] -rw-r--r-- 1 boinc boinc       105 Oct 13 06:36 job.xml
[2025-10-13 07:22:18] -rw-r--r-- 2 boinc boinc     15120 Oct 13 06:36 start_atlas.sh
[2025-10-13 07:22:18] drwxrwx--x 2 boinc boinc      4096 Oct 13 06:36 shared
[2025-10-13 07:22:18] -rw-r--r-- 2 boinc boinc    569682 Oct 13 06:36 input.tar.gz
[2025-10-13 07:22:18] -rw-r--r-- 1 boinc boinc      6728 Oct 13 06:36 init_data.xml
[2025-10-13 07:22:18] -rw-r--r-- 2 boinc boinc 218133443 Oct 13 06:36 EVNT.46676267._004295.pool.root.1
[2025-10-13 07:22:18] -rw-r--r-- 1 boinc boinc         0 Oct 13 06:36 boinc_lockfile
[2025-10-13 07:22:18] -rw-r--r-- 1 boinc boinc      2550 Oct 13 06:36 pandaJob.out
[2025-10-13 07:22:18] -rw------- 1 boinc boinc    974365 Oct 13 06:36 agis_schedconf.cvmfs.json
[2025-10-13 07:22:18] -rw------- 1 boinc boinc   1560580 Oct 13 06:36 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:22:18] drwx------ 5 boinc boinc      4096 Oct 13 06:36 pilot3
[2025-10-13 07:22:18] -rw------- 1 boinc boinc 195971493 Oct 13 07:20 HITS.46676269._090695.pool.root.1
[2025-10-13 07:22:18] -rw-r--r-- 1 boinc boinc       530 Oct 13 07:21 boinc_task_state.xml
[2025-10-13 07:22:18] -rw------- 1 boinc boinc      1017 Oct 13 07:21 memory_monitor_summary.json
[2025-10-13 07:22:18] -rw------- 1 boinc boinc    363772 Oct 13 07:21 log.46676269._090695.job.log.tgz.1
[2025-10-13 07:22:18] -rw------- 1 boinc boinc      7786 Oct 13 07:21 heartbeat.json
[2025-10-13 07:22:18] -rw------- 1 boinc boinc        95 Oct 13 07:21 pilot_heartbeat.json
[2025-10-13 07:22:18] -rw-r--r-- 1 boinc boinc        27 Oct 13 07:22 wrapper_checkpoint.txt
[2025-10-13 07:22:18] -rw-r--r-- 1 boinc boinc      8192 Oct 13 07:22 boinc_mmap_file
[2025-10-13 07:22:18] -rw------- 1 boinc boinc      4829 Oct 13 07:22 pilotlog.txt
[2025-10-13 07:22:18] -rw------- 1 boinc boinc    421997 Oct 13 07:22 log.46676269._090695.job.log.1
[2025-10-13 07:22:18] -rw-r--r-- 1 boinc boinc       620 Oct 13 07:22 runtime_log
[2025-10-13 07:22:18] -rw------- 1 boinc boinc    808960 Oct 13 07:22 result.tar.gz
[2025-10-13 07:22:18] -rw------- 1 boinc boinc       357 Oct 13 07:22 output.list
[2025-10-13 07:22:18] -rw-r--r-- 1 boinc boinc      9018 Oct 13 07:22 runtime_log.err
[2025-10-13 07:22:18] -rw------- 1 boinc boinc       705 Oct 13 07:22 qcKODmXMJS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm37UMDmTdKWXn.diag
[2025-10-13 07:22:18] -rw-r--r-- 1 boinc boinc     21993 Oct 13 07:22 stderr.txt
[2025-10-13 07:22:18] HITS file was successfully produced:
[2025-10-13 07:22:18] -rw------- 1 boinc boinc 195971493 Oct 13 07:20 shared/HITS.pool.root.1
[2025-10-13 07:22:18]  *** Contents of shared directory: ***
[2025-10-13 07:22:18] total 405780
[2025-10-13 07:22:18] -rw-r--r-- 2 boinc boinc     15120 Oct 13 06:36 start_atlas.sh
[2025-10-13 07:22:18] -rw-r--r-- 2 boinc boinc    569682 Oct 13 06:36 input.tar.gz
[2025-10-13 07:22:18] -rw-r--r-- 2 boinc boinc 218133443 Oct 13 06:36 ATLAS.root_0
[2025-10-13 07:22:18] -rw------- 1 boinc boinc 195971493 Oct 13 07:20 HITS.pool.root.1
[2025-10-13 07:22:18] -rw------- 1 boinc boinc    808960 Oct 13 07:22 result.tar.gz
07:22:19 (2450897): run_atlas exited; CPU time 29197.161213
07:22:19 (2450897): called boinc_finish(0)

</stderr_txt>
]]>

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