Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:02:18 (3268356): wrapper (7.7.26015): starting
23:02:18 (3268356): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 23:02:18] Arguments: --nthreads 9
[2025-10-12 23:02:18] Threads: 9
[2025-10-12 23:02:18] Checking for CVMFS
[2025-10-12 23:02:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 23:02:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 23:02:18] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 23:02:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 23:02:19] 2.13.2.0 5045 6554 75888 151645 2 273 20915252 40960000 19023 16776704 0 18848050 99.924 3001072 38209 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 23:02:19] CVMFS is ok
[2025-10-12 23:02:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 23:02:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 23:02:19] Further information can be found at the LHC@home message board.
[2025-10-12 23:02:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 23:02:19] Checking for apptainer binary...
[2025-10-12 23:02:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 23:02:19] Running /usr/bin/apptainer --version
[2025-10-12 23:02:19] apptainer version 1.4.3-1.el9
[2025-10-12 23:02:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 23:02:19] c-212-11.aglt2.org
[2025-10-12 23:02:19] apptainer works
[2025-10-12 23:02:19] Set ATHENA_PROC_NUMBER=9
[2025-10-12 23:02:19] Set ATHENA_CORE_NUMBER=9
[2025-10-12 23:02:19] Starting ATLAS job with PandaID=6840850808
[2025-10-12 23:02:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:48:13]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:48:14] 2025-10-13 07:47:19,316 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 03:48:14] 2025-10-13 07:47:19,403 | INFO     | time since job start (17082s) is within the limit (172800.0s)
[2025-10-13 03:48:14] 2025-10-13 07:47:19,557 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 03:48:14] 2025-10-13 07:47:19,566 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2928.052124999999
[2025-10-13 03:48:14] 2025-10-13 07:47:19,585 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6840850808/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 03:48:14] 2025-10-13 07:47:19,586 | INFO     | extracted standard info from prmon json
[2025-10-13 03:48:14] 2025-10-13 07:47:19,586 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 03:48:14] 2025-10-13 07:47:19,586 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 03:48:14] 2025-10-13 07:47:19,587 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 03:48:14] 2025-10-13 07:47:19,587 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 03:48:14] 2025-10-13 07:47:19,591 | INFO     | fitting pss+swap vs Time
[2025-10-13 03:48:14] 2025-10-13 07:47:19,591 | INFO     | sum of square deviations: 6806693436.396441
[2025-10-13 03:48:14] 2025-10-13 07:47:19,594 | INFO     | sum of deviations: 77605152616.10706
[2025-10-13 03:48:14] 2025-10-13 07:47:19,594 | INFO     | mean x: 1760333103.7035713
[2025-10-13 03:48:14] 2025-10-13 07:47:19,594 | INFO     | mean y: 2488228.8928571427
[2025-10-13 03:48:14] 2025-10-13 07:47:19,594 | INFO     | -- intersect: -20067597260.43172
[2025-10-13 03:48:14] 2025-10-13 07:47:19,594 | INFO     | intersect: -20067597260.43172
[2025-10-13 03:48:14] 2025-10-13 07:47:19,595 | INFO     | chi2: 2.8189459277315856
[2025-10-13 03:48:14] 2025-10-13 07:47:19,595 | INFO     | sum of square deviations: 6448527361.185463
[2025-10-13 03:48:14] 2025-10-13 07:47:19,597 | INFO     | sum of deviations: 93542986227.98549
[2025-10-13 03:48:14] 2025-10-13 07:47:19,597 | INFO     | mean x: 1760332951.2072728
[2025-10-13 03:48:14] 2025-10-13 07:47:19,597 | INFO     | mean y: 2494904.807272727
[2025-10-13 03:48:14] 2025-10-13 07:47:19,597 | INFO     | -- intersect: -25533071867.011383
[2025-10-13 03:48:14] 2025-10-13 07:47:19,597 | INFO     | intersect: -25533071867.011383
[2025-10-13 03:48:14] 2025-10-13 07:47:19,598 | INFO     | chi2: 2.1252521272486895
[2025-10-13 03:48:14] 2025-10-13 07:47:19,598 | INFO     | current chi2=2.1252521272486895 (change=24.608269128493486 %)
[2025-10-13 03:48:14] 2025-10-13 07:47:19,598 | INFO     | right removable region: 274
[2025-10-13 03:48:14] 2025-10-13 07:47:19,598 | INFO     | sum of square deviations: 6448492591.185463
[2025-10-13 03:48:14] 2025-10-13 07:47:19,600 | INFO     | sum of deviations: 22086478726.679996
[2025-10-13 03:48:14] 2025-10-13 07:47:19,600 | INFO     | mean x: 1760333256.2072728
[2025-10-13 03:48:14] 2025-10-13 07:47:19,600 | INFO     | mean y: 2511743.76
[2025-10-13 03:48:14] 2025-10-13 07:47:19,600 | INFO     | -- intersect: -6026736559.670524
[2025-10-13 03:48:14] 2025-10-13 07:47:19,600 | INFO     | intersect: -6026736559.670524
[2025-10-13 03:48:14] 2025-10-13 07:47:19,601 | INFO     | chi2: 1.0448795354368088
[2025-10-13 03:48:14] 2025-10-13 07:47:19,601 | INFO     | current chi2=1.0448795354368088 (change=62.933679388535616 %)
[2025-10-13 03:48:14] 2025-10-13 07:47:19,601 | INFO     | sum of square deviations: 6103082683.466704
[2025-10-13 03:48:14] 2025-10-13 07:47:19,603 | INFO     | sum of deviations: 3575725046.399994
[2025-10-13 03:48:14] 2025-10-13 07:47:19,603 | INFO     | mean x: 1760333408.711111
[2025-10-13 03:48:14] 2025-10-13 07:47:19,603 | INFO     | mean y: 2519902.6333333333
[2025-10-13 03:48:14] 2025-10-13 07:47:19,603 | INFO     | -- intersect: -1028838934.531819
[2025-10-13 03:48:14] 2025-10-13 07:47:19,603 | INFO     | intersect: -1028838934.531819
[2025-10-13 03:48:14] 2025-10-13 07:47:19,604 | INFO     | chi2: 0.895773825788077
[2025-10-13 03:48:14] 2025-10-13 07:47:19,604 | INFO     | current chi2=0.895773825788077 (change=14.270133981176942 %)
[2025-10-13 03:48:14] 2025-10-13 07:47:19,604 | INFO     | left removable region: 20
[2025-10-13 03:48:14] 2025-10-13 07:47:19,604 | INFO     | sum of square deviations: 5081074591.153501
[2025-10-13 03:48:14] 2025-10-13 07:47:19,606 | INFO     | sum of deviations: -5436156835.744094
[2025-10-13 03:48:14] 2025-10-13 07:47:19,606 | INFO     | mean x: 1760333530.7204723
[2025-10-13 03:48:14] 2025-10-13 07:47:19,606 | INFO     | mean y: 2539854.2007874018
[2025-10-13 03:48:14] 2025-10-13 07:47:19,606 | INFO     | -- intersect: 1885891295.8184128
[2025-10-13 03:48:14] 2025-10-13 07:47:19,606 | INFO     | intersect: 1885891295.8184128
[2025-10-13 03:48:14] 2025-10-13 07:47:19,606 | INFO     | chi2: 0.015639965062327774
[2025-10-13 03:48:14] 2025-10-13 07:47:19,607 | INFO     | -- intersect: 1885891295.8184128
[2025-10-13 03:48:14] 2025-10-13 07:47:19,607 | INFO     | current memory leak: -1.07 B/s (using 254 data points, chi2=0.02)
[2025-10-13 03:48:14] 2025-10-13 07:47:19,607 | INFO     | could have reported an average CPU frequency of 2942 MHz (13 samples)
[2025-10-13 03:48:14] 2025-10-13 07:47:19,607 | INFO     | ..............................
[2025-10-13 03:48:14] 2025-10-13 07:47:19,608 | INFO     | . Timing measurements:
[2025-10-13 03:48:14] 2025-10-13 07:47:19,608 | INFO     | . get job = 0 s
[2025-10-13 03:48:14] 2025-10-13 07:47:19,608 | INFO     | . initial setup = 3 s
[2025-10-13 03:48:14] 2025-10-13 07:47:19,608 | INFO     | . payload setup = 10 s
[2025-10-13 03:48:14] 2025-10-13 07:47:19,608 | INFO     | . stage-in = 0 s
[2025-10-13 03:48:14] 2025-10-13 07:47:19,608 | INFO     | . payload execution = 17038 s
[2025-10-13 03:48:14] 2025-10-13 07:47:19,608 | INFO     | . stage-out = 2 s
[2025-10-13 03:48:14] 2025-10-13 07:47:19,608 | INFO     | . log creation = 0 s
[2025-10-13 03:48:14] 2025-10-13 07:47:19,608 | INFO     | ..............................
[2025-10-13 03:48:14] 2025-10-13 07:47:19,692 | INFO     | 
[2025-10-13 03:48:14] 2025-10-13 07:47:19,692 | INFO     | job summary report
[2025-10-13 03:48:14] 2025-10-13 07:47:19,692 | INFO     | --------------------------------------------------
[2025-10-13 03:48:14] 2025-10-13 07:47:19,692 | INFO     | PanDA job id: 6840850808
[2025-10-13 03:48:14] 2025-10-13 07:47:19,693 | INFO     | task id: 46676269
[2025-10-13 03:48:14] 2025-10-13 07:47:19,693 | INFO     | errors: (none)
[2025-10-13 03:48:14] 2025-10-13 07:47:19,693 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 03:48:14] 2025-10-13 07:47:19,693 | INFO     | pilot state: finished 
[2025-10-13 03:48:14] 2025-10-13 07:47:19,693 | INFO     | transexitcode: 0
[2025-10-13 03:48:14] 2025-10-13 07:47:19,693 | INFO     | exeerrorcode: 0
[2025-10-13 03:48:14] 2025-10-13 07:47:19,693 | INFO     | exeerrordiag: 
[2025-10-13 03:48:14] 2025-10-13 07:47:19,693 | INFO     | exitcode: 0
[2025-10-13 03:48:14] 2025-10-13 07:47:19,693 | INFO     | exitmsg: OK
[2025-10-13 03:48:14] 2025-10-13 07:47:19,693 | INFO     | cpuconsumptiontime: 37974 s
[2025-10-13 03:48:14] 2025-10-13 07:47:19,693 | INFO     | nevents: 400
[2025-10-13 03:48:14] 2025-10-13 07:47:19,693 | INFO     | neventsw: 0
[2025-10-13 03:48:14] 2025-10-13 07:47:19,693 | INFO     | pid: 3293233
[2025-10-13 03:48:14] 2025-10-13 07:47:19,694 | INFO     | pgrp: 3293233
[2025-10-13 03:48:14] 2025-10-13 07:47:19,694 | INFO     | corecount: 9
[2025-10-13 03:48:14] 2025-10-13 07:47:19,694 | INFO     | event service: False
[2025-10-13 03:48:14] 2025-10-13 07:47:19,694 | INFO     | sizes: {0: 2348857, 1: 2348857, 8: 2349147, 11: 2349175, 17053: 2381259, 17056: 2390441, 17064: 2390579}
[2025-10-13 03:48:14] 2025-10-13 07:47:19,694 | INFO     | --------------------------------------------------
[2025-10-13 03:48:14] 2025-10-13 07:47:19,694 | INFO     | 
[2025-10-13 03:48:14] 2025-10-13 07:47:19,694 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 03:48:14] 2025-10-13 07:47:19,719 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 03:48:14] 2025-10-13 07:47:19,720 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 03:48:14] 2025-10-13 07:47:19,720 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 03:48:14] 2025-10-13 07:47:19,720 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 03:48:14] 2025-10-13 07:47:19,720 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 03:48:14] 2025-10-13 07:47:19,720 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 03:48:14] 2025-10-13 07:47:19,720 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 03:48:14] 2025-10-13 07:47:19,720 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 03:48:14] 2025-10-13 07:47:19,720 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 03:48:14] 2025-10-13 07:47:19,720 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 03:48:14] 2025-10-13 07:47:19,720 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 03:48:14] 2025-10-13 07:47:19,720 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 03:48:14] 2025-10-13 07:47:19,720 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 03:48:14] 2025-10-13 07:47:19,720 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 03:48:14] 2025-10-13 07:47:19,720 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 03:48:14] 2025-10-13 07:47:19,721 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 03:48:14] 2025-10-13 07:47:19,721 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 03:48:14] 2025-10-13 07:47:19,721 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 03:48:14] 2025-10-13 07:47:19,721 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 03:48:14] 2025-10-13 07:47:19,721 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 03:48:14] 2025-10-13 07:47:19,721 | INFO     | job 6840850808 has completed (purged errors)
[2025-10-13 03:48:14] 2025-10-13 07:47:19,721 | INFO     | overall cleanup function is called
[2025-10-13 03:48:14] 2025-10-13 07:47:20,728 | INFO     | --- collectZombieJob: --- 10, [3293233]
[2025-10-13 03:48:14] 2025-10-13 07:47:20,728 | INFO     | zombie collector waiting for pid 3293233
[2025-10-13 03:48:14] 2025-10-13 07:47:20,728 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 03:48:14] 2025-10-13 07:47:20,729 | INFO     | collected zombie processes
[2025-10-13 03:48:14] 2025-10-13 07:47:20,729 | INFO     | will attempt to kill all subprocesses of pid=3293233
[2025-10-13 03:48:14] 2025-10-13 07:47:21,089 | INFO     | process IDs to be killed: [3293233] (in reverse order)
[2025-10-13 03:48:14] 2025-10-13 07:47:21,209 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 03:48:14] 2025-10-13 07:47:21,209 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 03:48:14] 2025-10-13 07:47:21,224 | INFO     | did not find any defunct processes belonging to 3293233
[2025-10-13 03:48:14] 2025-10-13 07:47:21,239 | INFO     | did not find any defunct processes belonging to 3293233
[2025-10-13 03:48:14] 2025-10-13 07:47:21,240 | INFO     | ready for new job
[2025-10-13 03:48:14] 2025-10-13 07:47:21,240 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 03:48:14] 2025-10-13 07:47:21,242 | INFO     | ***************************************
[2025-10-13 03:48:14] 2025-10-13 07:47:21,242 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 03:48:14] 2025-10-13 07:47:21,242 | INFO     | ***************************************
[2025-10-13 03:48:14] 2025-10-13 07:47:21,242 | INFO     | 
[2025-10-13 03:48:14] 2025-10-13 07:47:21,248 | INFO     | architecture information:
[2025-10-13 03:48:14] 2025-10-13 07:47:21,248 | INFO     | executing command: cat /etc/os-release
[2025-10-13 03:48:14] 2025-10-13 07:47:21,263 | INFO     | cat /etc/os-release:
[2025-10-13 03:48:14] NAME="CentOS Linux"
[2025-10-13 03:48:14] VERSION="7 (Core)"
[2025-10-13 03:48:14] ID="centos"
[2025-10-13 03:48:14] ID_LIKE="rhel fedora"
[2025-10-13 03:48:14] VERSION_ID="7"
[2025-10-13 03:48:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 03:48:14] ANSI_COLOR="0;31"
[2025-10-13 03:48:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 03:48:14] HOME_URL="https://www.centos.org/"
[2025-10-13 03:48:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 03:48:14] 
[2025-10-13 03:48:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 03:48:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 03:48:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 03:48:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 03:48:14] 
[2025-10-13 03:48:14] 2025-10-13 07:47:21,264 | INFO     | ***************************************
[2025-10-13 03:48:14] 2025-10-13 07:47:21,771 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 03:48:14] 2025-10-13 07:47:21,843 | INFO     | sufficient remaining disk space (127366332416 B)
[2025-10-13 03:48:14] 2025-10-13 07:47:21,844 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 03:48:14] 2025-10-13 07:47:21,845 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 03:48:14] 2025-10-13 07:47:21,845 | INFO     | update_server=False
[2025-10-13 03:48:14] 2025-10-13 07:47:21,845 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 03:48:14] 2025-10-13 07:47:22,170 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 03:48:14] 2025-10-13 07:47:22,215 | INFO     | all payload control threads have been joined
[2025-10-13 03:48:14] 2025-10-13 07:47:22,301 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:48:14] 2025-10-13 07:47:22,665 | INFO     | all data control threads have been joined
[2025-10-13 03:48:14] 2025-10-13 07:47:22,826 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:48:14] 2025-10-13 07:47:22,826 | INFO     | aborting loop
[2025-10-13 03:48:14] 2025-10-13 07:47:22,852 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:48:14] 2025-10-13 07:47:22,862 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:48:14] 2025-10-13 07:47:23,124 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:48:14] 2025-10-13 07:47:23,220 | INFO     | [payload] control thread has finished
[2025-10-13 03:48:14] 2025-10-13 07:47:23,279 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:48:14] 2025-10-13 07:47:23,299 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:48:14] 2025-10-13 07:47:23,336 | INFO     | all job control threads have been joined
[2025-10-13 03:48:14] 2025-10-13 07:47:23,380 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:48:14] 2025-10-13 07:47:23,671 | INFO     | [data] control thread has finished
[2025-10-13 03:48:14] 2025-10-13 07:47:23,834 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:48:14] 2025-10-13 07:47:23,834 | INFO     | [job] validate thread has finished
[2025-10-13 03:48:14] 2025-10-13 07:47:24,178 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:48:14] 2025-10-13 07:47:24,261 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:48:14] 2025-10-13 07:47:24,309 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:48:14] 2025-10-13 07:47:24,342 | INFO     | [job] control thread has finished
[2025-10-13 03:48:14] 2025-10-13 07:47:24,703 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:48:14] 2025-10-13 07:47:25,709 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:48:14] 2025-10-13 07:47:26,310 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:48:14] 2025-10-13 07:47:35,360 [wrapper] supervise_pilot (15 min periods counter: 20)
[2025-10-13 03:48:14] 2025-10-13 07:47:52,912 | INFO     | PID=3278873 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 03:48:14] 2025-10-13 07:47:52,912 | INFO     | .. there are 16 such processes running
[2025-10-13 03:48:14] 2025-10-13 07:47:52,913 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:48:14] 2025-10-13 07:47:52,913 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:48:14] 2025-10-13 07:47:52,913 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:48:14] 2025-10-13 07:48:06,879 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:48:14] 2025-10-13 07:48:08,307 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140713498588992)>', '<ExcThread(monitor, started 140713144588032)>']
[2025-10-13 03:48:14] 2025-10-13 07:48:09,007 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:48:14] 2025-10-13 07:48:09,008 | INFO     | [monitor] control thread has ended
[2025-10-13 03:48:14] 2025-10-13 07:48:13,334 | INFO     | all workflow threads have been joined
[2025-10-13 03:48:14] 2025-10-13 07:48:13,334 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:48:14] 2025-10-13 07:48:13,335 | INFO     | traces error code: 0
[2025-10-13 03:48:14] 2025-10-13 07:48:13,335 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:48:14] 2025-10-13 07:48:13,655 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:48:14] 2025-10-13 07:48:13,660 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:48:14] 2025-10-13 07:48:13,663 [wrapper] pilotpid: 3278873
[2025-10-13 03:48:14] 2025-10-13 07:48:13,668 [wrapper] Pilot exit status: 0
[2025-10-13 03:48:14] 2025-10-13 07:48:13,678 [wrapper] pandaids: 6840850808
[2025-10-13 03:48:14] 2025-10-13 07:48:13,799 [wrapper] cleanup supervisor_pilot 3963356 3278874
[2025-10-13 03:48:14] 2025-10-13 07:48:13,812 [wrapper] Test setup, not cleaning
[2025-10-13 03:48:14] 2025-10-13 07:48:13,831 [wrapper] apfmon messages muted
[2025-10-13 03:48:14] 2025-10-13 07:48:13,834 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:48:14] 2025-10-13 07:48:13,837 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:48:14]  *** Error codes and diagnostics ***
[2025-10-13 03:48:14]     "exeErrorCode": 0,
[2025-10-13 03:48:14]     "exeErrorDiag": "",
[2025-10-13 03:48:14]     "pilotErrorCode": 0,
[2025-10-13 03:48:14]     "pilotErrorDiag": "",
[2025-10-13 03:48:14]  *** Listing of results directory ***
[2025-10-13 03:48:14] total 410568
[2025-10-13 03:48:14] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 17:57 pilot3.tar.gz
[2025-10-13 03:48:14] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 18:12 queuedata.json
[2025-10-13 03:48:14] -rwx------. 1 boincer umatlas     36292 Oct 12 18:12 runpilot2-wrapper.sh
[2025-10-13 03:48:14] -rw-r--r--. 1 boincer umatlas       100 Oct 12 23:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:48:14] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 23:02 run_atlas
[2025-10-13 03:48:14] -rw-r--r--. 1 boincer umatlas       105 Oct 12 23:02 job.xml
[2025-10-13 03:48:14] -rw-r--r--. 2 boincer umatlas 220622902 Oct 12 23:02 EVNT.46676267._004298.pool.root.1
[2025-10-13 03:48:14] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 23:02 start_atlas.sh
[2025-10-13 03:48:14] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 23:02 shared
[2025-10-13 03:48:14] -rw-r--r--. 2 boincer umatlas    569676 Oct 12 23:02 input.tar.gz
[2025-10-13 03:48:14] -rw-r--r--. 1 boincer umatlas         0 Oct 12 23:02 boinc_lockfile
[2025-10-13 03:48:14] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 23:02 pandaJob.out
[2025-10-13 03:48:14] -rw-------. 1 boincer umatlas    974373 Oct 12 23:02 agis_schedconf.cvmfs.json
[2025-10-13 03:48:14] drwx------. 5 boincer umatlas      4096 Oct 12 23:02 pilot3
[2025-10-13 03:48:14] -rw-r--r--. 1 boincer umatlas      6947 Oct 13 03:45 init_data.xml
[2025-10-13 03:48:14] -rw-------. 1 boincer umatlas 190347965 Oct 13 03:46 HITS.46676269._090756.pool.root.1
[2025-10-13 03:48:14] -rw-r--r--. 1 boincer umatlas       530 Oct 13 03:46 boinc_task_state.xml
[2025-10-13 03:48:14] -rw-------. 1 boincer umatlas      1050 Oct 13 03:47 memory_monitor_summary.json
[2025-10-13 03:48:14] -rw-------. 1 boincer umatlas   1560580 Oct 13 03:47 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:48:14] -rw-------. 1 boincer umatlas    507017 Oct 13 03:47 log.46676269._090756.job.log.tgz.1
[2025-10-13 03:48:14] -rw-------. 1 boincer umatlas      7803 Oct 13 03:47 heartbeat.json
[2025-10-13 03:48:14] -rw-------. 1 boincer umatlas        95 Oct 13 03:47 pilot_heartbeat.json
[2025-10-13 03:48:14] -rw-------. 1 boincer umatlas      4825 Oct 13 03:48 pilotlog.txt
[2025-10-13 03:48:14] -rw-------. 1 boincer umatlas   2268122 Oct 13 03:48 log.46676269._090756.job.log.1
[2025-10-13 03:48:14] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 03:48 boinc_mmap_file
[2025-10-13 03:48:14] -rw-------. 1 boincer umatlas       357 Oct 13 03:48 output.list
[2025-10-13 03:48:14] -rw-r--r--. 1 boincer umatlas        28 Oct 13 03:48 wrapper_checkpoint.txt
[2025-10-13 03:48:14] -rw-r--r--. 1 boincer umatlas       620 Oct 13 03:48 runtime_log
[2025-10-13 03:48:14] -rw-------. 1 boincer umatlas   2795520 Oct 13 03:48 result.tar.gz
[2025-10-13 03:48:14] -rw-r--r--. 1 boincer umatlas      8704 Oct 13 03:48 runtime_log.err
[2025-10-13 03:48:14] -rw-------. 1 boincer umatlas       659 Oct 13 03:48 rmqNDmjTJS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmw8UMDmTqUdsn.diag
[2025-10-13 03:48:14] -rw-r--r--. 1 boincer umatlas     21167 Oct 13 03:48 stderr.txt
[2025-10-13 03:48:14] HITS file was successfully produced:
[2025-10-13 03:48:14] -rw-------. 1 boincer umatlas 190347965 Oct 13 03:46 shared/HITS.pool.root.1
[2025-10-13 03:48:14]  *** Contents of shared directory: ***
[2025-10-13 03:48:14] total 404656
[2025-10-13 03:48:14] -rw-r--r--. 2 boincer umatlas 220622902 Oct 12 23:02 ATLAS.root_0
[2025-10-13 03:48:14] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 23:02 start_atlas.sh
[2025-10-13 03:48:14] -rw-r--r--. 2 boincer umatlas    569676 Oct 12 23:02 input.tar.gz
[2025-10-13 03:48:14] -rw-------. 1 boincer umatlas 190347965 Oct 13 03:46 HITS.pool.root.1
[2025-10-13 03:48:14] -rw-------. 1 boincer umatlas   2795520 Oct 13 03:48 result.tar.gz
03:48:36 (3268356): run_atlas exited; CPU time 38484.804901
03:48:36 (3268356): called boinc_finish(0)

</stderr_txt>
]]>

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