Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:52:43 (13668): wrapper (7.7.26015): starting
22:52:43 (13668): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 22:52:43] Arguments: --nthreads 8
[2025-10-12 22:52:43] Threads: 8
[2025-10-12 22:52:43] Checking for CVMFS
[2025-10-12 22:52:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 22:52:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 22:52:43] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 22:52:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 22:52:43] 2.11.2.0 10718 53775 123980 151645 2 59 13082517 18432000 1833 130560 0 48655551 99.975 2293874 37458 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 22:52:43] CVMFS is ok
[2025-10-12 22:52:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 22:52:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 22:52:43] Further information can be found at the LHC@home message board.
[2025-10-12 22:52:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 22:52:43] Checking for apptainer binary...
[2025-10-12 22:52:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 22:52:43] Running /usr/bin/apptainer --version
[2025-10-12 22:52:43] apptainer version 1.3.2-1.el7
[2025-10-12 22:52:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 22:52:44] c-206-2.aglt2.org
[2025-10-12 22:52:44] apptainer works
[2025-10-12 22:52:44] Set ATHENA_PROC_NUMBER=8
[2025-10-12 22:52:44] Set ATHENA_CORE_NUMBER=8
[2025-10-12 22:52:44] Starting ATLAS job with PandaID=6840536960
[2025-10-12 22:52:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
01:10:24 (30727): wrapper (7.7.26015): starting
01:10:24 (30727): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 01:10:24] Arguments: --nthreads 8
[2025-10-13 01:10:24] Threads: 8
[2025-10-13 01:10:24] This job has been restarted, cleaning up previous attempt
[2025-10-13 01:10:24] Checking for CVMFS
[2025-10-13 01:10:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 01:10:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 01:10:24] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 01:10:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 01:10:24] 2.11.2.0 10718 53912 117992 151649 1 39 13105413 18432001 1 130560 0 48905478 99.975 2299239 37387 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 01:10:24] CVMFS is ok
[2025-10-13 01:10:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 01:10:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 01:10:24] Further information can be found at the LHC@home message board.
[2025-10-13 01:10:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 01:10:24] Checking for apptainer binary...
[2025-10-13 01:10:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 01:10:24] Running /usr/bin/apptainer --version
[2025-10-13 01:10:24] apptainer version 1.3.2-1.el7
[2025-10-13 01:10:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 01:10:25] c-206-2.aglt2.org
[2025-10-13 01:10:25] apptainer works
[2025-10-13 01:10:25] Set ATHENA_PROC_NUMBER=8
[2025-10-13 01:10:25] Set ATHENA_CORE_NUMBER=8
[2025-10-13 01:10:25] Starting ATLAS job with PandaID=6840536960
[2025-10-13 01:10:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 04:16:18]  *** The last 200 lines of the pilot log: ***
[2025-10-13 04:16:18] 2025-10-13 08:15:45,707 | INFO     | -- intersect: -29566718002.4177
[2025-10-13 04:16:18] 2025-10-13 08:15:45,707 | INFO     | intersect: -29566718002.4177
[2025-10-13 04:16:18] 2025-10-13 08:15:45,707 | INFO     | chi2: 1.297646186750093
[2025-10-13 04:16:18] 2025-10-13 08:15:45,708 | INFO     | sum of square deviations: 1719429448.0
[2025-10-13 04:16:18] 2025-10-13 08:15:45,708 | INFO     | sum of deviations: 30336414409.0
[2025-10-13 04:16:18] 2025-10-13 08:15:45,709 | INFO     | mean x: 1760337632.0
[2025-10-13 04:16:18] 2025-10-13 08:15:45,709 | INFO     | mean y: 2458852.514124294
[2025-10-13 04:16:18] 2025-10-13 08:15:45,709 | INFO     | -- intersect: -31055711034.145706
[2025-10-13 04:16:18] 2025-10-13 08:15:45,709 | INFO     | intersect: -31055711034.145706
[2025-10-13 04:16:18] 2025-10-13 08:15:45,709 | INFO     | chi2: 1.2980367729370956
[2025-10-13 04:16:18] 2025-10-13 08:15:45,709 | INFO     | current chi2=1.2980367729370956 (change=-0.030099590396116746 %)
[2025-10-13 04:16:18] 2025-10-13 08:15:45,709 | INFO     | right removable region: 176
[2025-10-13 04:16:18] 2025-10-13 08:15:45,710 | INFO     | sum of square deviations: 1719429448.0
[2025-10-13 04:16:18] 2025-10-13 08:15:45,710 | INFO     | sum of deviations: 5745789530.999999
[2025-10-13 04:16:18] 2025-10-13 08:15:45,711 | INFO     | mean x: 1760337937.0
[2025-10-13 04:16:18] 2025-10-13 08:15:45,711 | INFO     | mean y: 2485724.7118644067
[2025-10-13 04:16:18] 2025-10-13 08:15:45,711 | INFO     | -- intersect: -5880007041.247054
[2025-10-13 04:16:18] 2025-10-13 08:15:45,711 | INFO     | intersect: -5880007041.247054
[2025-10-13 04:16:18] 2025-10-13 08:15:45,711 | INFO     | chi2: 0.025211932998386862
[2025-10-13 04:16:18] 2025-10-13 08:15:45,711 | INFO     | current chi2=0.025211932998386862 (change=98.05710267900302 %)
[2025-10-13 04:16:18] 2025-10-13 08:15:45,712 | INFO     | sum of square deviations: 1577789583.0
[2025-10-13 04:16:18] 2025-10-13 08:15:45,712 | INFO     | sum of deviations: 2219534745.5
[2025-10-13 04:16:18] 2025-10-13 08:15:45,712 | INFO     | mean x: 1760338089.5
[2025-10-13 04:16:18] 2025-10-13 08:15:45,713 | INFO     | mean y: 2489477.773255814
[2025-10-13 04:16:18] 2025-10-13 08:15:45,713 | INFO     | -- intersect: -2473842978.449038
[2025-10-13 04:16:18] 2025-10-13 08:15:45,713 | INFO     | intersect: -2473842978.449038
[2025-10-13 04:16:18] 2025-10-13 08:15:45,713 | INFO     | chi2: 0.0012318349391826065
[2025-10-13 04:16:18] 2025-10-13 08:15:45,713 | INFO     | current chi2=0.0012318349391826065 (change=95.1140797523878 %)
[2025-10-13 04:16:18] 2025-10-13 08:15:45,713 | INFO     | sum of square deviations: 1444149868.0
[2025-10-13 04:16:18] 2025-10-13 08:15:45,714 | INFO     | sum of deviations: 1339114029.0000002
[2025-10-13 04:16:18] 2025-10-13 08:15:45,714 | INFO     | mean x: 1760338242.0
[2025-10-13 04:16:18] 2025-10-13 08:15:45,714 | INFO     | mean y: 2490477.149700599
[2025-10-13 04:16:18] 2025-10-13 08:15:45,714 | INFO     | -- intersect: -1629814928.18334
[2025-10-13 04:16:18] 2025-10-13 08:15:45,715 | INFO     | intersect: -1629814928.18334
[2025-10-13 04:16:18] 2025-10-13 08:15:45,715 | INFO     | chi2: 0.0004950951680079581
[2025-10-13 04:16:18] 2025-10-13 08:15:45,715 | INFO     | current chi2=0.0004950951680079581 (change=59.80831909699831 %)
[2025-10-13 04:16:18] 2025-10-13 08:15:45,715 | INFO     | sum of square deviations: 1318277740.5
[2025-10-13 04:16:18] 2025-10-13 08:15:45,716 | INFO     | sum of deviations: 1110554898.0000002
[2025-10-13 04:16:18] 2025-10-13 08:15:45,716 | INFO     | mean x: 1760338394.5
[2025-10-13 04:16:18] 2025-10-13 08:15:45,716 | INFO     | mean y: 2490754.0864197533
[2025-10-13 04:16:18] 2025-10-13 08:15:45,716 | INFO     | -- intersect: -1480468690.7176409
[2025-10-13 04:16:18] 2025-10-13 08:15:45,716 | INFO     | intersect: -1480468690.7176409
[2025-10-13 04:16:18] 2025-10-13 08:15:45,717 | INFO     | chi2: 0.0004773803339170573
[2025-10-13 04:16:18] 2025-10-13 08:15:45,717 | INFO     | current chi2=0.0004773803339170573 (change=3.5780664477452624 %)
[2025-10-13 04:16:18] 2025-10-13 08:15:45,717 | INFO     | left removable region: 40
[2025-10-13 04:16:18] 2025-10-13 08:15:45,717 | INFO     | sum of square deviations: 779958810.0
[2025-10-13 04:16:18] 2025-10-13 08:15:45,718 | INFO     | sum of deviations: 281755309.5
[2025-10-13 04:16:18] 2025-10-13 08:15:45,718 | INFO     | mean x: 1760338821.5
[2025-10-13 04:16:18] 2025-10-13 08:15:45,718 | INFO     | mean y: 2491379.757352941
[2025-10-13 04:16:18] 2025-10-13 08:15:45,718 | INFO     | -- intersect: -633420162.131119
[2025-10-13 04:16:18] 2025-10-13 08:15:45,718 | INFO     | intersect: -633420162.131119
[2025-10-13 04:16:18] 2025-10-13 08:15:45,718 | INFO     | chi2: 0.0003861259476472938
[2025-10-13 04:16:18] 2025-10-13 08:15:45,718 | INFO     | -- intersect: -633420162.131119
[2025-10-13 04:16:18] 2025-10-13 08:15:45,719 | INFO     | current memory leak: 0.36 B/s (using 136 data points, chi2=0.00)
[2025-10-13 04:16:18] 2025-10-13 08:15:45,719 | INFO     | could have reported an average CPU frequency of 2282 MHz (10 samples)
[2025-10-13 04:16:18] 2025-10-13 08:15:45,719 | INFO     | ..............................
[2025-10-13 04:16:18] 2025-10-13 08:15:45,719 | INFO     | . Timing measurements:
[2025-10-13 04:16:18] 2025-10-13 08:15:45,719 | INFO     | . get job = 0 s
[2025-10-13 04:16:18] 2025-10-13 08:15:45,719 | INFO     | . initial setup = 1 s
[2025-10-13 04:16:18] 2025-10-13 08:15:45,719 | INFO     | . payload setup = 6 s
[2025-10-13 04:16:18] 2025-10-13 08:15:45,719 | INFO     | . stage-in = 0 s
[2025-10-13 04:16:18] 2025-10-13 08:15:45,720 | INFO     | . payload execution = 11074 s
[2025-10-13 04:16:18] 2025-10-13 08:15:45,720 | INFO     | . stage-out = 1 s
[2025-10-13 04:16:18] 2025-10-13 08:15:45,720 | INFO     | . log creation = 0 s
[2025-10-13 04:16:18] 2025-10-13 08:15:45,720 | INFO     | ..............................
[2025-10-13 04:16:18] 2025-10-13 08:15:45,797 | INFO     | 
[2025-10-13 04:16:18] 2025-10-13 08:15:45,797 | INFO     | job summary report
[2025-10-13 04:16:18] 2025-10-13 08:15:45,797 | INFO     | --------------------------------------------------
[2025-10-13 04:16:18] 2025-10-13 08:15:45,797 | INFO     | PanDA job id: 6840536960
[2025-10-13 04:16:18] 2025-10-13 08:15:45,797 | INFO     | task id: 46676269
[2025-10-13 04:16:18] 2025-10-13 08:15:45,797 | INFO     | errors: (none)
[2025-10-13 04:16:18] 2025-10-13 08:15:45,797 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 04:16:18] 2025-10-13 08:15:45,797 | INFO     | pilot state: finished 
[2025-10-13 04:16:18] 2025-10-13 08:15:45,798 | INFO     | transexitcode: 0
[2025-10-13 04:16:18] 2025-10-13 08:15:45,798 | INFO     | exeerrorcode: 0
[2025-10-13 04:16:18] 2025-10-13 08:15:45,798 | INFO     | exeerrordiag: 
[2025-10-13 04:16:18] 2025-10-13 08:15:45,798 | INFO     | exitcode: 0
[2025-10-13 04:16:18] 2025-10-13 08:15:45,798 | INFO     | exitmsg: OK
[2025-10-13 04:16:18] 2025-10-13 08:15:45,798 | INFO     | cpuconsumptiontime: 84244 s
[2025-10-13 04:16:18] 2025-10-13 08:15:45,798 | INFO     | nevents: 400
[2025-10-13 04:16:18] 2025-10-13 08:15:45,798 | INFO     | neventsw: 0
[2025-10-13 04:16:18] 2025-10-13 08:15:45,798 | INFO     | pid: 28695
[2025-10-13 04:16:18] 2025-10-13 08:15:45,798 | INFO     | pgrp: 28695
[2025-10-13 04:16:18] 2025-10-13 08:15:45,799 | INFO     | corecount: 8
[2025-10-13 04:16:18] 2025-10-13 08:15:45,799 | INFO     | event service: False
[2025-10-13 04:16:18] 2025-10-13 08:15:45,799 | INFO     | sizes: {0: 2348855, 4: 2349117, 11: 2349145, 11084: 2378269, 11086: 2387267, 11088: 2387323, 11093: 2387645}
[2025-10-13 04:16:18] 2025-10-13 08:15:45,799 | INFO     | --------------------------------------------------
[2025-10-13 04:16:18] 2025-10-13 08:15:45,799 | INFO     | 
[2025-10-13 04:16:18] 2025-10-13 08:15:45,799 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-13 04:16:18] 2025-10-13 08:15:45,813 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 04:16:18] 2025-10-13 08:15:45,814 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 04:16:18] 2025-10-13 08:15:45,814 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 04:16:18] 2025-10-13 08:15:45,814 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 04:16:18] 2025-10-13 08:15:45,814 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 04:16:18] 2025-10-13 08:15:45,814 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 04:16:18] 2025-10-13 08:15:45,814 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 04:16:18] 2025-10-13 08:15:45,814 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 04:16:18] 2025-10-13 08:15:45,814 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 04:16:18] 2025-10-13 08:15:45,815 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 04:16:18] 2025-10-13 08:15:45,815 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 04:16:18] 2025-10-13 08:15:45,815 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 04:16:18] 2025-10-13 08:15:45,815 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 04:16:18] 2025-10-13 08:15:45,815 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 04:16:18] 2025-10-13 08:15:45,815 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 04:16:18] 2025-10-13 08:15:45,815 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 04:16:18] 2025-10-13 08:15:45,815 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 04:16:18] 2025-10-13 08:15:45,815 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 04:16:18] 2025-10-13 08:15:45,816 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 04:16:18] 2025-10-13 08:15:45,816 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 04:16:18] 2025-10-13 08:15:45,816 | INFO     | job 6840536960 has completed (purged errors)
[2025-10-13 04:16:18] 2025-10-13 08:15:45,816 | INFO     | overall cleanup function is called
[2025-10-13 04:16:18] 2025-10-13 08:15:46,823 | INFO     | --- collectZombieJob: --- 10, [28695]
[2025-10-13 04:16:18] 2025-10-13 08:15:46,823 | INFO     | zombie collector waiting for pid 28695
[2025-10-13 04:16:18] 2025-10-13 08:15:46,823 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 04:16:18] 2025-10-13 08:15:46,823 | INFO     | collected zombie processes
[2025-10-13 04:16:18] 2025-10-13 08:15:46,823 | INFO     | will attempt to kill all subprocesses of pid=28695
[2025-10-13 04:16:18] 2025-10-13 08:15:46,918 | INFO     | process IDs to be killed: [28695] (in reverse order)
[2025-10-13 04:16:18] 2025-10-13 08:15:46,955 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 04:16:18] 2025-10-13 08:15:46,956 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 04:16:18] 2025-10-13 08:15:46,958 | INFO     | did not find any defunct processes belonging to 28695
[2025-10-13 04:16:18] 2025-10-13 08:15:46,960 | INFO     | did not find any defunct processes belonging to 28695
[2025-10-13 04:16:18] 2025-10-13 08:15:46,960 | INFO     | ready for new job
[2025-10-13 04:16:18] 2025-10-13 08:15:46,961 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 04:16:18] 2025-10-13 08:15:46,962 | INFO     | ***************************************
[2025-10-13 04:16:18] 2025-10-13 08:15:46,962 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 04:16:18] 2025-10-13 08:15:46,962 | INFO     | ***************************************
[2025-10-13 04:16:18] 2025-10-13 08:15:46,962 | INFO     | 
[2025-10-13 04:16:18] 2025-10-13 08:15:46,963 | INFO     | architecture information:
[2025-10-13 04:16:18] 2025-10-13 08:15:46,963 | INFO     | executing command: cat /etc/os-release
[2025-10-13 04:16:18] 2025-10-13 08:15:46,975 | INFO     | cat /etc/os-release:
[2025-10-13 04:16:18] NAME="CentOS Linux"
[2025-10-13 04:16:18] VERSION="7 (Core)"
[2025-10-13 04:16:18] ID="centos"
[2025-10-13 04:16:18] ID_LIKE="rhel fedora"
[2025-10-13 04:16:18] VERSION_ID="7"
[2025-10-13 04:16:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 04:16:18] ANSI_COLOR="0;31"
[2025-10-13 04:16:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 04:16:18] HOME_URL="https://www.centos.org/"
[2025-10-13 04:16:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 04:16:18] 
[2025-10-13 04:16:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 04:16:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 04:16:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 04:16:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 04:16:18] 
[2025-10-13 04:16:18] 2025-10-13 08:15:46,975 | INFO     | ***************************************
[2025-10-13 04:16:18] 2025-10-13 08:15:47,478 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-13 04:16:18] 2025-10-13 08:15:47,490 | INFO     | sufficient remaining disk space (27922530304 B)
[2025-10-13 04:16:18] 2025-10-13 08:15:47,490 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 04:16:18] 2025-10-13 08:15:47,490 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 04:16:18] 2025-10-13 08:15:47,490 | INFO     | update_server=False
[2025-10-13 04:16:18] 2025-10-13 08:15:47,491 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 04:16:18] 2025-10-13 08:15:47,491 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:16:18] 2025-10-13 08:15:47,491 | INFO     | aborting loop
[2025-10-13 04:16:18] 2025-10-13 08:15:47,491 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:16:18] 2025-10-13 08:15:47,491 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 04:16:18] 2025-10-13 08:15:47,663 | INFO     | all payload control threads have been joined
[2025-10-13 04:16:18] 2025-10-13 08:15:48,457 | INFO     | all data control threads have been joined
[2025-10-13 04:16:18] 2025-10-13 08:15:48,493 | INFO     | [job] job monitor thread has finished
[2025-10-13 04:16:18] 2025-10-13 08:15:48,496 | INFO     | [job] retrieve thread has finished
[2025-10-13 04:16:18] 2025-10-13 08:15:48,497 | INFO     | [job] queue monitor thread has finished
[2025-10-13 04:16:18] 2025-10-13 08:15:48,587 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 04:16:18] 2025-10-13 08:15:48,666 | INFO     | [payload] control thread has finished
[2025-10-13 04:16:18] 2025-10-13 08:15:48,798 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 04:16:18] 2025-10-13 08:15:48,990 | INFO     | all job control threads have been joined
[2025-10-13 04:16:18] 2025-10-13 08:15:49,206 | INFO     | [job] validate thread has finished
[2025-10-13 04:16:18] 2025-10-13 08:15:49,357 | INFO     | [payload] validate_post thread has finished
[2025-10-13 04:16:18] 2025-10-13 08:15:49,446 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 04:16:18] 2025-10-13 08:15:49,455 | INFO     | [data] copytool_in thread has finished
[2025-10-13 04:16:18] 2025-10-13 08:15:49,463 | INFO     | [data] control thread has finished
[2025-10-13 04:16:18] 2025-10-13 08:15:49,497 | INFO     | [data] copytool_out thread has finished
[2025-10-13 04:16:18] 2025-10-13 08:15:49,818 | INFO     | [payload] failed_post thread has finished
[2025-10-13 04:16:18] 2025-10-13 08:15:49,966 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 04:16:18] 2025-10-13 08:15:49,995 | INFO     | [job] control thread has finished
[2025-10-13 04:16:18] 2025-10-13 08:15:50,956 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 04:16:18] 2025-10-13 08:15:54,962 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 04:16:18] 2025-10-13 08:15:55,248 | INFO     | [monitor] cgroup control has ended
[2025-10-13 04:16:18] 2025-10-13 08:15:56,245 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140594431551296)>', '<ExcThread(monitor, started 140593825027840)>']
[2025-10-13 04:16:18] 2025-10-13 08:16:01,270 | INFO     | all workflow threads have been joined
[2025-10-13 04:16:18] 2025-10-13 08:16:01,270 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 04:16:18] 2025-10-13 08:16:01,270 | INFO     | traces error code: 0
[2025-10-13 04:16:18] 2025-10-13 08:16:01,271 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 04:16:18] 2025-10-13 08:16:18,513 | INFO     | PID=9526 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 04:16:18] 2025-10-13 08:16:18,513 | INFO     | .. there are 3 such processes running
[2025-10-13 04:16:18] 2025-10-13 08:16:18,513 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 04:16:18] 2025-10-13 08:16:18,513 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 04:16:18] 2025-10-13 08:16:18,513 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 04:16:18] 2025-10-13 08:16:18,514 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 04:16:18] 2025-10-13 08:16:18,514 | INFO     | [monitor] control thread has ended
[2025-10-13 04:16:18] 2025-10-13 08:16:18,592 [wrapper] ==== pilot stdout END ====
[2025-10-13 04:16:18] 2025-10-13 08:16:18,594 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 04:16:18] 2025-10-13 08:16:18,596 [wrapper] pilotpid: 9526
[2025-10-13 04:16:18] 2025-10-13 08:16:18,598 [wrapper] Pilot exit status: 0
[2025-10-13 04:16:18] 2025-10-13 08:16:18,605 [wrapper] pandaids: 6840536960 6840536960
[2025-10-13 04:16:18] 2025-10-13 08:16:18,630 [wrapper] cleanup supervisor_pilot 21445 9528
[2025-10-13 04:16:18] 2025-10-13 08:16:18,632 [wrapper] Test setup, not cleaning
[2025-10-13 04:16:18] 2025-10-13 08:16:18,635 [wrapper] apfmon messages muted
[2025-10-13 04:16:18] 2025-10-13 08:16:18,637 [wrapper] ==== wrapper stdout END ====
[2025-10-13 04:16:18] 2025-10-13 08:16:18,639 [wrapper] ==== wrapper stderr END ====
[2025-10-13 04:16:18]  *** Error codes and diagnostics ***
[2025-10-13 04:16:18]     "exeErrorCode": 0,
[2025-10-13 04:16:18]     "exeErrorDiag": "",
[2025-10-13 04:16:18]     "pilotErrorCode": 0,
[2025-10-13 04:16:18]     "pilotErrorDiag": "",
[2025-10-13 04:16:18]  *** Listing of results directory ***
[2025-10-13 04:16:18] total 619940
[2025-10-13 04:16:18] drwx------ 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-13 04:16:18] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 14:20 pilot3.tar.gz
[2025-10-13 04:16:18] -rwx------ 1 boincer umatlas     36292 Oct 12 14:39 runpilot2-wrapper.sh
[2025-10-13 04:16:18] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 14:39 queuedata.json
[2025-10-13 04:16:18] -rw-r--r-- 1 boincer umatlas       100 Oct 12 22:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 04:16:18] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 22:52 run_atlas
[2025-10-13 04:16:18] -rw-r--r-- 1 boincer umatlas       105 Oct 12 22:52 job.xml
[2025-10-13 04:16:18] -rw-r--r-- 3 boincer umatlas 219205596 Oct 12 22:52 EVNT.46676267._004415.pool.root.1
[2025-10-13 04:16:18] -rw-r--r-- 3 boincer umatlas 219205596 Oct 12 22:52 ATLAS.root_0
[2025-10-13 04:16:18] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 22:52 start_atlas.sh
[2025-10-13 04:16:18] drwxrwx--x 2 boincer umatlas      4096 Oct 12 22:52 shared
[2025-10-13 04:16:18] -rw-r--r-- 2 boincer umatlas    569672 Oct 12 22:52 input.tar.gz
[2025-10-13 04:16:18] -rw-r--r-- 1 boincer umatlas         0 Oct 12 22:52 boinc_lockfile
[2025-10-13 04:16:18] -rw-r--r-- 1 boincer umatlas      2549 Oct 13 01:10 pandaJob.out
[2025-10-13 04:16:18] -rw------- 1 boincer umatlas    974365 Oct 13 01:10 agis_schedconf.cvmfs.json
[2025-10-13 04:16:18] -rw-r--r-- 1 boincer umatlas      5952 Oct 13 04:12 init_data.xml
[2025-10-13 04:16:18] -rw------- 1 boincer umatlas 188583413 Oct 13 04:15 HITS.46676269._086379.pool.root.1
[2025-10-13 04:16:18] -rw-r--r-- 1 boincer umatlas       531 Oct 13 04:15 boinc_task_state.xml
[2025-10-13 04:16:18] -rw------- 1 boincer umatlas      1061 Oct 13 04:15 memory_monitor_summary.json
[2025-10-13 04:16:18] -rw------- 1 boincer umatlas   1560580 Oct 13 04:15 agis_ddmendpoints.agis.ALL.json
[2025-10-13 04:16:18] -rw------- 1 boincer umatlas    407034 Oct 13 04:15 log.46676269._086379.job.log.tgz.1
[2025-10-13 04:16:18] -rw------- 1 boincer umatlas      7850 Oct 13 04:15 heartbeat.json
[2025-10-13 04:16:18] -rw------- 1 boincer umatlas        96 Oct 13 04:15 pilot_heartbeat.json
[2025-10-13 04:16:18] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 04:16 boinc_mmap_file
[2025-10-13 04:16:18] -rw-r--r-- 1 boincer umatlas        29 Oct 13 04:16 wrapper_checkpoint.txt
[2025-10-13 04:16:18] -rw------- 1 boincer umatlas       819 Oct 13 04:16 pilotlog.txt
[2025-10-13 04:16:18] -rw------- 1 boincer umatlas   1558688 Oct 13 04:16 log.46676269._086379.job.log.1
[2025-10-13 04:16:18] -rw------- 1 boincer umatlas       357 Oct 13 04:16 output.list
[2025-10-13 04:16:18] -rw-r--r-- 1 boincer umatlas       620 Oct 13 04:16 runtime_log
[2025-10-13 04:16:18] -rw------- 1 boincer umatlas   1986560 Oct 13 04:16 result.tar.gz
[2025-10-13 04:16:18] -rw-r--r-- 1 boincer umatlas      8784 Oct 13 04:16 runtime_log.err
[2025-10-13 04:16:18] -rw------- 1 boincer umatlas       786 Oct 13 04:16 GJYNDmR9FS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmRhUMDmbNqhEo.diag
[2025-10-13 04:16:18] -rw-r--r-- 1 boincer umatlas     23026 Oct 13 04:16 stderr.txt
[2025-10-13 04:16:18] HITS file was successfully produced:
[2025-10-13 04:16:18] -rw------- 1 boincer umatlas 188583413 Oct 13 04:15 shared/HITS.pool.root.1
[2025-10-13 04:16:18]  *** Contents of shared directory: ***
[2025-10-13 04:16:18] total 400752
[2025-10-13 04:16:18] -rw-r--r-- 3 boincer umatlas 219205596 Oct 12 22:52 ATLAS.root_0
[2025-10-13 04:16:18] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 22:52 start_atlas.sh
[2025-10-13 04:16:18] -rw-r--r-- 2 boincer umatlas    569672 Oct 12 22:52 input.tar.gz
[2025-10-13 04:16:18] -rw------- 1 boincer umatlas 188583413 Oct 13 04:15 HITS.pool.root.1
[2025-10-13 04:16:18] -rw------- 1 boincer umatlas   1986560 Oct 13 04:16 result.tar.gz
04:16:20 (30727): run_atlas exited; CPU time 84374.438111
04:16:20 (30727): called boinc_finish(0)

</stderr_txt>
]]>

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