Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:50:50 (18292): wrapper (7.7.26015): starting
22:50:50 (18292): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 22:50:50] Arguments: --nthreads 8
[2025-10-12 22:50:50] Threads: 8
[2025-10-12 22:50:50] Checking for CVMFS
[2025-10-12 22:50:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 22:50:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 22:50:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 22:50:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 22:50:50] 2.11.2.0 8814 53724 114476 151645 3 59 18283562 18432000 1833 130560 0 48936072 99.974 2412747 39873 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 22:50:50] CVMFS is ok
[2025-10-12 22:50:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 22:50:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 22:50:50] Further information can be found at the LHC@home message board.
[2025-10-12 22:50:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 22:50:50] Checking for apptainer binary...
[2025-10-12 22:50:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 22:50:50] Running /usr/bin/apptainer --version
[2025-10-12 22:50:51] apptainer version 1.3.2-1.el7
[2025-10-12 22:50:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 22:50:51] c-206-19.aglt2.org
[2025-10-12 22:50:51] apptainer works
[2025-10-12 22:50:51] Set ATHENA_PROC_NUMBER=8
[2025-10-12 22:50:51] Set ATHENA_CORE_NUMBER=8
[2025-10-12 22:50:51] Starting ATLAS job with PandaID=6840850759
[2025-10-12 22:50:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 01:40:25]  *** The last 200 lines of the pilot log: ***
[2025-10-13 01:40:25] 2025-10-13 05:39:31,023 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 01:40:25] 2025-10-13 05:39:31,023 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 01:40:25] 2025-10-13 05:39:31,028 | INFO     | fitting pss+swap vs Time
[2025-10-13 01:40:25] 2025-10-13 05:39:31,028 | INFO     | sum of square deviations: 1418361477.5
[2025-10-13 01:40:25] 2025-10-13 05:39:31,029 | INFO     | sum of deviations: -3959202804.000002
[2025-10-13 01:40:25] 2025-10-13 05:39:31,030 | INFO     | mean x: 1760328920.5
[2025-10-13 01:40:25] 2025-10-13 05:39:31,030 | INFO     | mean y: 2473079.8554216865
[2025-10-13 01:40:25] 2025-10-13 05:39:31,030 | INFO     | -- intersect: 4916241049.844508
[2025-10-13 01:40:25] 2025-10-13 05:39:31,030 | INFO     | intersect: 4916241049.844508
[2025-10-13 01:40:25] 2025-10-13 05:39:31,031 | INFO     | chi2: 2.258836893769088
[2025-10-13 01:40:25] 2025-10-13 05:39:31,031 | INFO     | sum of square deviations: 1294014960.0
[2025-10-13 01:40:25] 2025-10-13 05:39:31,032 | INFO     | sum of deviations: 6861342159.000003
[2025-10-13 01:40:25] 2025-10-13 05:39:31,033 | INFO     | mean x: 1760328768.0
[2025-10-13 01:40:25] 2025-10-13 05:39:31,033 | INFO     | mean y: 2486023.8198757763
[2025-10-13 01:40:25] 2025-10-13 05:39:31,033 | INFO     | -- intersect: -9331423059.873356
[2025-10-13 01:40:25] 2025-10-13 05:39:31,033 | INFO     | intersect: -9331423059.873356
[2025-10-13 01:40:25] 2025-10-13 05:39:31,034 | INFO     | chi2: 1.4927000754694921
[2025-10-13 01:40:25] 2025-10-13 05:39:31,034 | INFO     | current chi2=1.4927000754694921 (change=33.91731472126004 %)
[2025-10-13 01:40:25] 2025-10-13 05:39:31,034 | INFO     | sum of square deviations: 1177156955.0
[2025-10-13 01:40:25] 2025-10-13 05:39:31,035 | INFO     | sum of deviations: 6570912252.999999
[2025-10-13 01:40:25] 2025-10-13 05:39:31,036 | INFO     | mean x: 1760328615.5
[2025-10-13 01:40:25] 2025-10-13 05:39:31,036 | INFO     | mean y: 2485644.6923076925
[2025-10-13 01:40:25] 2025-10-13 05:39:31,036 | INFO     | -- intersect: -9823701780.667187
[2025-10-13 01:40:25] 2025-10-13 05:39:31,036 | INFO     | intersect: -9823701780.667187
[2025-10-13 01:40:25] 2025-10-13 05:39:31,036 | INFO     | chi2: 1.4935588616708617
[2025-10-13 01:40:25] 2025-10-13 05:39:31,037 | INFO     | current chi2=1.4935588616708617 (change=-0.057532401550892794 %)
[2025-10-13 01:40:25] 2025-10-13 05:39:31,037 | INFO     | right removable region: 155
[2025-10-13 01:40:25] 2025-10-13 05:39:31,037 | INFO     | sum of square deviations: 1294014960.0
[2025-10-13 01:40:25] 2025-10-13 05:39:31,038 | INFO     | sum of deviations: -27189283255.0
[2025-10-13 01:40:25] 2025-10-13 05:39:31,039 | INFO     | mean x: 1760329073.0
[2025-10-13 01:40:25] 2025-10-13 05:39:31,039 | INFO     | mean y: 2501153.4720496894
[2025-10-13 01:40:25] 2025-10-13 05:39:31,039 | INFO     | -- intersect: 36989775077.88523
[2025-10-13 01:40:25] 2025-10-13 05:39:31,039 | INFO     | intersect: 36989775077.88523
[2025-10-13 01:40:25] 2025-10-13 05:39:31,040 | INFO     | chi2: 0.912066461661038
[2025-10-13 01:40:25] 2025-10-13 05:39:31,040 | INFO     | current chi2=0.912066461661038 (change=59.622296582062326 %)
[2025-10-13 01:40:25] 2025-10-13 05:39:31,040 | INFO     | sum of square deviations: 1177156955.0
[2025-10-13 01:40:25] 2025-10-13 05:39:31,041 | INFO     | sum of deviations: -22614246319.5
[2025-10-13 01:40:25] 2025-10-13 05:39:31,042 | INFO     | mean x: 1760329225.5
[2025-10-13 01:40:25] 2025-10-13 05:39:31,042 | INFO     | mean y: 2495161.8012820515
[2025-10-13 01:40:25] 2025-10-13 05:39:31,042 | INFO     | -- intersect: 33820006530.85373
[2025-10-13 01:40:25] 2025-10-13 05:39:31,042 | INFO     | intersect: 33820006530.85373
[2025-10-13 01:40:25] 2025-10-13 05:39:31,042 | INFO     | chi2: 0.9013654943702202
[2025-10-13 01:40:25] 2025-10-13 05:39:31,043 | INFO     | current chi2=0.9013654943702202 (change=1.1732661752883033 %)
[2025-10-13 01:40:25] 2025-10-13 05:39:31,043 | INFO     | left removable region: 20
[2025-10-13 01:40:25] 2025-10-13 05:39:31,043 | INFO     | sum of square deviations: 762879420.0
[2025-10-13 01:40:25] 2025-10-13 05:39:31,044 | INFO     | sum of deviations: -1165981999.0
[2025-10-13 01:40:25] 2025-10-13 05:39:31,044 | INFO     | mean x: 1760329195.0
[2025-10-13 01:40:25] 2025-10-13 05:39:31,045 | INFO     | mean y: 2492713.592592593
[2025-10-13 01:40:25] 2025-10-13 05:39:31,045 | INFO     | -- intersect: 2692973148.474636
[2025-10-13 01:40:25] 2025-10-13 05:39:31,045 | INFO     | intersect: 2692973148.474636
[2025-10-13 01:40:25] 2025-10-13 05:39:31,045 | INFO     | chi2: 0.03656983823877777
[2025-10-13 01:40:25] 2025-10-13 05:39:31,045 | INFO     | -- intersect: 2692973148.474636
[2025-10-13 01:40:25] 2025-10-13 05:39:31,046 | INFO     | current memory leak: -1.53 B/s (using 135 data points, chi2=0.04)
[2025-10-13 01:40:25] 2025-10-13 05:39:31,046 | INFO     | could have reported an average CPU frequency of 2546 MHz (9 samples)
[2025-10-13 01:40:25] 2025-10-13 05:39:31,047 | INFO     | ..............................
[2025-10-13 01:40:25] 2025-10-13 05:39:31,047 | INFO     | . Timing measurements:
[2025-10-13 01:40:25] 2025-10-13 05:39:31,047 | INFO     | . get job = 0 s
[2025-10-13 01:40:25] 2025-10-13 05:39:31,047 | INFO     | . initial setup = 2 s
[2025-10-13 01:40:25] 2025-10-13 05:39:31,047 | INFO     | . payload setup = 4 s
[2025-10-13 01:40:25] 2025-10-13 05:39:31,047 | INFO     | . stage-in = 0 s
[2025-10-13 01:40:25] 2025-10-13 05:39:31,048 | INFO     | . payload execution = 10074 s
[2025-10-13 01:40:25] 2025-10-13 05:39:31,048 | INFO     | . stage-out = 1 s
[2025-10-13 01:40:25] 2025-10-13 05:39:31,048 | INFO     | . log creation = 0 s
[2025-10-13 01:40:25] 2025-10-13 05:39:31,048 | INFO     | ..............................
[2025-10-13 01:40:25] 2025-10-13 05:39:31,130 | INFO     | 
[2025-10-13 01:40:25] 2025-10-13 05:39:31,130 | INFO     | job summary report
[2025-10-13 01:40:25] 2025-10-13 05:39:31,130 | INFO     | --------------------------------------------------
[2025-10-13 01:40:25] 2025-10-13 05:39:31,130 | INFO     | PanDA job id: 6840850759
[2025-10-13 01:40:25] 2025-10-13 05:39:31,130 | INFO     | task id: 46676269
[2025-10-13 01:40:25] 2025-10-13 05:39:31,130 | INFO     | errors: (none)
[2025-10-13 01:40:25] 2025-10-13 05:39:31,130 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 01:40:25] 2025-10-13 05:39:31,130 | INFO     | pilot state: finished 
[2025-10-13 01:40:25] 2025-10-13 05:39:31,131 | INFO     | transexitcode: 0
[2025-10-13 01:40:25] 2025-10-13 05:39:31,131 | INFO     | exeerrorcode: 0
[2025-10-13 01:40:25] 2025-10-13 05:39:31,131 | INFO     | exeerrordiag: 
[2025-10-13 01:40:25] 2025-10-13 05:39:31,131 | INFO     | exitcode: 0
[2025-10-13 01:40:25] 2025-10-13 05:39:31,131 | INFO     | exitmsg: OK
[2025-10-13 01:40:25] 2025-10-13 05:39:31,131 | INFO     | cpuconsumptiontime: 76467 s
[2025-10-13 01:40:25] 2025-10-13 05:39:31,131 | INFO     | nevents: 400
[2025-10-13 01:40:25] 2025-10-13 05:39:31,131 | INFO     | neventsw: 0
[2025-10-13 01:40:25] 2025-10-13 05:39:31,131 | INFO     | pid: 28997
[2025-10-13 01:40:25] 2025-10-13 05:39:31,131 | INFO     | pgrp: 28997
[2025-10-13 01:40:25] 2025-10-13 05:39:31,132 | INFO     | corecount: 8
[2025-10-13 01:40:25] 2025-10-13 05:39:31,132 | INFO     | event service: False
[2025-10-13 01:40:25] 2025-10-13 05:39:31,132 | INFO     | sizes: {0: 2348630, 1: 2348885, 2: 2348885, 5: 2349175, 12: 2349231, 10082: 2377778, 10083: 2377905, 10084: 2386959, 10087: 2387015, 10092: 2387273}
[2025-10-13 01:40:25] 2025-10-13 05:39:31,132 | INFO     | --------------------------------------------------
[2025-10-13 01:40:25] 2025-10-13 05:39:31,132 | INFO     | 
[2025-10-13 01:40:25] 2025-10-13 05:39:31,132 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 01:40:25] 2025-10-13 05:39:31,145 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 01:40:25] 2025-10-13 05:39:31,145 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 01:40:25] 2025-10-13 05:39:31,145 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 01:40:25] 2025-10-13 05:39:31,145 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 01:40:25] 2025-10-13 05:39:31,146 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 01:40:25] 2025-10-13 05:39:31,146 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 01:40:25] 2025-10-13 05:39:31,146 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 01:40:25] 2025-10-13 05:39:31,146 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 01:40:25] 2025-10-13 05:39:31,146 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 01:40:25] 2025-10-13 05:39:31,146 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 01:40:25] 2025-10-13 05:39:31,147 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 01:40:25] 2025-10-13 05:39:31,147 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 01:40:25] 2025-10-13 05:39:31,147 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 01:40:25] 2025-10-13 05:39:31,147 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 01:40:25] 2025-10-13 05:39:31,147 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 01:40:25] 2025-10-13 05:39:31,147 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 01:40:25] 2025-10-13 05:39:31,148 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 01:40:25] 2025-10-13 05:39:31,148 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 01:40:25] 2025-10-13 05:39:31,148 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 01:40:25] 2025-10-13 05:39:31,148 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 01:40:25] 2025-10-13 05:39:31,148 | INFO     | job 6840850759 has completed (purged errors)
[2025-10-13 01:40:25] 2025-10-13 05:39:31,149 | INFO     | overall cleanup function is called
[2025-10-13 01:40:25] 2025-10-13 05:39:32,155 | INFO     | --- collectZombieJob: --- 10, [28997]
[2025-10-13 01:40:25] 2025-10-13 05:39:32,155 | INFO     | zombie collector waiting for pid 28997
[2025-10-13 01:40:25] 2025-10-13 05:39:32,156 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 01:40:25] 2025-10-13 05:39:32,156 | INFO     | collected zombie processes
[2025-10-13 01:40:25] 2025-10-13 05:39:32,156 | INFO     | will attempt to kill all subprocesses of pid=28997
[2025-10-13 01:40:25] 2025-10-13 05:39:32,321 | INFO     | process IDs to be killed: [28997] (in reverse order)
[2025-10-13 01:40:25] 2025-10-13 05:39:32,376 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 01:40:25] 2025-10-13 05:39:32,376 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 01:40:25] 2025-10-13 05:39:32,379 | INFO     | did not find any defunct processes belonging to 28997
[2025-10-13 01:40:25] 2025-10-13 05:39:32,381 | INFO     | did not find any defunct processes belonging to 28997
[2025-10-13 01:40:25] 2025-10-13 05:39:32,381 | INFO     | ready for new job
[2025-10-13 01:40:25] 2025-10-13 05:39:32,381 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 01:40:25] 2025-10-13 05:39:32,383 | INFO     | ***************************************
[2025-10-13 01:40:25] 2025-10-13 05:39:32,383 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 01:40:25] 2025-10-13 05:39:32,383 | INFO     | ***************************************
[2025-10-13 01:40:25] 2025-10-13 05:39:32,383 | INFO     | 
[2025-10-13 01:40:25] 2025-10-13 05:39:32,384 | INFO     | architecture information:
[2025-10-13 01:40:25] 2025-10-13 05:39:32,384 | INFO     | executing command: cat /etc/os-release
[2025-10-13 01:40:25] 2025-10-13 05:39:32,399 | INFO     | cat /etc/os-release:
[2025-10-13 01:40:25] NAME="CentOS Linux"
[2025-10-13 01:40:25] VERSION="7 (Core)"
[2025-10-13 01:40:25] ID="centos"
[2025-10-13 01:40:25] ID_LIKE="rhel fedora"
[2025-10-13 01:40:25] VERSION_ID="7"
[2025-10-13 01:40:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 01:40:25] ANSI_COLOR="0;31"
[2025-10-13 01:40:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 01:40:25] HOME_URL="https://www.centos.org/"
[2025-10-13 01:40:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 01:40:25] 
[2025-10-13 01:40:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 01:40:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 01:40:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 01:40:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 01:40:25] 
[2025-10-13 01:40:25] 2025-10-13 05:39:32,400 | INFO     | ***************************************
[2025-10-13 01:40:25] 2025-10-13 05:39:32,903 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 01:40:25] 2025-10-13 05:39:32,917 | INFO     | sufficient remaining disk space (28041019392 B)
[2025-10-13 01:40:25] 2025-10-13 05:39:32,917 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 01:40:25] 2025-10-13 05:39:32,918 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 01:40:25] 2025-10-13 05:39:32,918 | INFO     | update_server=False
[2025-10-13 01:40:25] 2025-10-13 05:39:32,918 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 01:40:25] 2025-10-13 05:39:32,918 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 01:40:25] 2025-10-13 05:39:32,918 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:40:25] 2025-10-13 05:39:33,228 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:40:25] 2025-10-13 05:39:33,228 | INFO     | aborting loop
[2025-10-13 01:40:25] 2025-10-13 05:39:33,569 | INFO     | all data control threads have been joined
[2025-10-13 01:40:25] 2025-10-13 05:39:33,729 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 01:40:25] 2025-10-13 05:39:33,923 | INFO     | [job] retrieve thread has finished
[2025-10-13 01:40:25] 2025-10-13 05:39:33,924 | INFO     | [job] queue monitor thread has finished
[2025-10-13 01:40:25] 2025-10-13 05:39:34,034 | INFO     | [payload] validate_post thread has finished
[2025-10-13 01:40:25] 2025-10-13 05:39:34,169 | INFO     | all job control threads have been joined
[2025-10-13 01:40:25] 2025-10-13 05:39:34,170 | INFO     | all payload control threads have been joined
[2025-10-13 01:40:25] 2025-10-13 05:39:34,188 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 01:40:25] 2025-10-13 05:39:34,233 | INFO     | [job] job monitor thread has finished
[2025-10-13 01:40:25] 2025-10-13 05:39:34,261 | INFO     | [job] validate thread has finished
[2025-10-13 01:40:25] 2025-10-13 05:39:34,574 | INFO     | [data] control thread has finished
[2025-10-13 01:40:25] 2025-10-13 05:39:35,072 | INFO     | [payload] failed_post thread has finished
[2025-10-13 01:40:25] 2025-10-13 05:39:35,116 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 01:40:25] 2025-10-13 05:39:35,130 | INFO     | [data] copytool_in thread has finished
[2025-10-13 01:40:25] 2025-10-13 05:39:35,174 | INFO     | [job] control thread has finished
[2025-10-13 01:40:25] 2025-10-13 05:39:35,176 | INFO     | [payload] control thread has finished
[2025-10-13 01:40:25] 2025-10-13 05:39:35,181 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 01:40:25] 2025-10-13 05:39:35,734 | INFO     | [data] copytool_out thread has finished
[2025-10-13 01:40:25] 2025-10-13 05:39:36,925 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 01:40:25] 2025-10-13 05:39:43,418 | INFO     | job.realtimelogging is not enabled
[2025-10-13 01:40:25] 2025-10-13 05:39:44,425 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 01:40:25] 2025-10-13 05:40:02,690 | INFO     | PID=22521 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 01:40:25] 2025-10-13 05:40:02,690 | INFO     | .. there are 3 such processes running
[2025-10-13 01:40:25] 2025-10-13 05:40:02,691 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 01:40:25] 2025-10-13 05:40:02,691 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 01:40:25] 2025-10-13 05:40:02,691 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 01:40:25] 2025-10-13 05:40:19,086 | INFO     | [monitor] cgroup control has ended
[2025-10-13 01:40:25] 2025-10-13 05:40:19,792 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139870105032512)>', '<ExcThread(monitor, started 139869787494144)>']
[2025-10-13 01:40:25] 2025-10-13 05:40:20,781 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 01:40:25] 2025-10-13 05:40:20,781 | INFO     | [monitor] control thread has ended
[2025-10-13 01:40:25] 2025-10-13 05:40:24,819 | INFO     | all workflow threads have been joined
[2025-10-13 01:40:25] 2025-10-13 05:40:24,819 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 01:40:25] 2025-10-13 05:40:24,819 | INFO     | traces error code: 0
[2025-10-13 01:40:25] 2025-10-13 05:40:24,820 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 01:40:25] 2025-10-13 05:40:24,960 [wrapper] ==== pilot stdout END ====
[2025-10-13 01:40:25] 2025-10-13 05:40:24,963 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 01:40:25] 2025-10-13 05:40:24,965 [wrapper] pilotpid: 22521
[2025-10-13 01:40:25] 2025-10-13 05:40:24,968 [wrapper] Pilot exit status: 0
[2025-10-13 01:40:25] 2025-10-13 05:40:24,983 [wrapper] pandaids: 6840850759
[2025-10-13 01:40:25] 2025-10-13 05:40:25,025 [wrapper] cleanup supervisor_pilot   489 22522
[2025-10-13 01:40:25] 2025-10-13 05:40:25,027 [wrapper] Test setup, not cleaning
[2025-10-13 01:40:25] 2025-10-13 05:40:25,030 [wrapper] apfmon messages muted
[2025-10-13 01:40:25] 2025-10-13 05:40:25,032 [wrapper] ==== wrapper stdout END ====
[2025-10-13 01:40:25] 2025-10-13 05:40:25,035 [wrapper] ==== wrapper stderr END ====
[2025-10-13 01:40:25]  *** Error codes and diagnostics ***
[2025-10-13 01:40:25]     "exeErrorCode": 0,
[2025-10-13 01:40:25]     "exeErrorDiag": "",
[2025-10-13 01:40:25]     "pilotErrorCode": 0,
[2025-10-13 01:40:25]     "pilotErrorDiag": "",
[2025-10-13 01:40:25]  *** Listing of results directory ***
[2025-10-13 01:40:25] total 410756
[2025-10-13 01:40:25] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 17:57 pilot3.tar.gz
[2025-10-13 01:40:25] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 18:06 queuedata.json
[2025-10-13 01:40:25] -rwx------ 1 boincer umatlas     36292 Oct 12 18:08 runpilot2-wrapper.sh
[2025-10-13 01:40:25] -rw-r--r-- 1 boincer umatlas       100 Oct 12 22:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 01:40:25] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 22:50 run_atlas
[2025-10-13 01:40:25] -rw-r--r-- 1 boincer umatlas       105 Oct 12 22:50 job.xml
[2025-10-13 01:40:25] -rw-r--r-- 2 boincer umatlas 223297019 Oct 12 22:50 EVNT.46676267._004296.pool.root.1
[2025-10-13 01:40:25] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 22:50 start_atlas.sh
[2025-10-13 01:40:25] drwxrwx--x 2 boincer umatlas      4096 Oct 12 22:50 shared
[2025-10-13 01:40:25] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 22:50 input.tar.gz
[2025-10-13 01:40:25] -rw-r--r-- 1 boincer umatlas         0 Oct 12 22:50 boinc_lockfile
[2025-10-13 01:40:25] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 22:50 pandaJob.out
[2025-10-13 01:40:25] -rw------- 1 boincer umatlas    974373 Oct 12 22:51 agis_schedconf.cvmfs.json
[2025-10-13 01:40:25] -rw------- 1 boincer umatlas   1560580 Oct 12 22:51 agis_ddmendpoints.agis.ALL.json
[2025-10-13 01:40:25] drwx------ 5 boincer umatlas      4096 Oct 12 22:51 pilot3
[2025-10-13 01:40:25] -rw------- 1 boincer umatlas 189785058 Oct 13 01:38 HITS.46676269._090707.pool.root.1
[2025-10-13 01:40:25] -rw-r--r-- 1 boincer umatlas      5953 Oct 13 01:38 init_data.xml
[2025-10-13 01:40:25] -rw-r--r-- 1 boincer umatlas       530 Oct 13 01:38 boinc_task_state.xml
[2025-10-13 01:40:25] -rw------- 1 boincer umatlas      1054 Oct 13 01:39 memory_monitor_summary.json
[2025-10-13 01:40:25] -rw------- 1 boincer umatlas    396195 Oct 13 01:39 log.46676269._090707.job.log.tgz.1
[2025-10-13 01:40:25] -rw------- 1 boincer umatlas        95 Oct 13 01:39 pilot_heartbeat.json
[2025-10-13 01:40:25] -rw------- 1 boincer umatlas      7857 Oct 13 01:39 heartbeat.json
[2025-10-13 01:40:25] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 01:40 boinc_mmap_file
[2025-10-13 01:40:25] -rw-r--r-- 1 boincer umatlas        28 Oct 13 01:40 wrapper_checkpoint.txt
[2025-10-13 01:40:25] -rw------- 1 boincer umatlas      4893 Oct 13 01:40 pilotlog.txt
[2025-10-13 01:40:25] -rw------- 1 boincer umatlas   1422178 Oct 13 01:40 log.46676269._090707.job.log.1
[2025-10-13 01:40:25] -rw------- 1 boincer umatlas       357 Oct 13 01:40 output.list
[2025-10-13 01:40:25] -rw-r--r-- 1 boincer umatlas       620 Oct 13 01:40 runtime_log
[2025-10-13 01:40:25] -rw------- 1 boincer umatlas   1832960 Oct 13 01:40 result.tar.gz
[2025-10-13 01:40:25] -rw------- 1 boincer umatlas       661 Oct 13 01:40 YjnNDmdPJS8n9Rq4apOajLDm4fhM0noT9bVof3QYDml8UMDmvRm2Sn.diag
[2025-10-13 01:40:25] -rw-r--r-- 1 boincer umatlas      8704 Oct 13 01:40 runtime_log.err
[2025-10-13 01:40:25] -rw-r--r-- 1 boincer umatlas     20888 Oct 13 01:40 stderr.txt
[2025-10-13 01:40:25] HITS file was successfully produced:
[2025-10-13 01:40:25] -rw------- 1 boincer umatlas 189785058 Oct 13 01:38 shared/HITS.pool.root.1
[2025-10-13 01:40:25]  *** Contents of shared directory: ***
[2025-10-13 01:40:25] total 405776
[2025-10-13 01:40:25] -rw-r--r-- 2 boincer umatlas 223297019 Oct 12 22:50 ATLAS.root_0
[2025-10-13 01:40:25] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 22:50 start_atlas.sh
[2025-10-13 01:40:25] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 22:50 input.tar.gz
[2025-10-13 01:40:25] -rw------- 1 boincer umatlas 189785058 Oct 13 01:38 HITS.pool.root.1
[2025-10-13 01:40:25] -rw------- 1 boincer umatlas   1832960 Oct 13 01:40 result.tar.gz
01:40:26 (18292): run_atlas exited; CPU time 76585.185703
01:40:26 (18292): called boinc_finish(0)

</stderr_txt>
]]>

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