Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:47:38 (3851479): wrapper (7.7.26015): starting
13:47:38 (3851479): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 13:47:38] Arguments: --nthreads 3
[2025-10-13 13:47:38] Threads: 3
[2025-10-13 13:47:38] Checking for CVMFS
[2025-10-13 13:47:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 13:47:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 13:47:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 13:47:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 13:47:38] 2.9.2.0 796922 5743 83888 151660 3 57 32878557 36864001 0 130560 0 4562764 99.991 200228 970 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 13:47:38] CVMFS is ok
[2025-10-13 13:47:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 13:47:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 13:47:38] Further information can be found at the LHC@home message board.
[2025-10-13 13:47:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 13:47:38] Checking for apptainer binary...
[2025-10-13 13:47:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 13:47:38] Running /usr/bin/apptainer --version
[2025-10-13 13:47:38] apptainer version 1.4.1-1.1
[2025-10-13 13:47:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 13:47:38] atlasA303
[2025-10-13 13:47:38] apptainer works
[2025-10-13 13:47:38] Set ATHENA_PROC_NUMBER=3
[2025-10-13 13:47:38] Set ATHENA_CORE_NUMBER=3
[2025-10-13 13:47:38] Starting ATLAS job with PandaID=6840749655
[2025-10-13 13:47:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 15:12:13]  *** The last 200 lines of the pilot log: ***
[2025-10-13 15:12:13] 2025-10-13 13:11:42,716 | INFO     | 
[2025-10-13 15:12:13] 2025-10-13 13:11:42,716 | INFO     | architecture information:
[2025-10-13 15:12:13] 2025-10-13 13:11:42,717 | INFO     | executing command: cat /etc/os-release
[2025-10-13 15:12:13] 2025-10-13 13:11:42,726 | INFO     | cat /etc/os-release:
[2025-10-13 15:12:13] NAME="CentOS Linux"
[2025-10-13 15:12:13] VERSION="7 (Core)"
[2025-10-13 15:12:13] ID="centos"
[2025-10-13 15:12:13] ID_LIKE="rhel fedora"
[2025-10-13 15:12:13] VERSION_ID="7"
[2025-10-13 15:12:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 15:12:13] ANSI_COLOR="0;31"
[2025-10-13 15:12:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 15:12:13] HOME_URL="https://www.centos.org/"
[2025-10-13 15:12:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 15:12:13] 
[2025-10-13 15:12:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 15:12:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 15:12:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 15:12:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 15:12:13] 
[2025-10-13 15:12:13] 2025-10-13 13:11:42,726 | INFO     | ***************************************
[2025-10-13 15:12:13] 2025-10-13 13:11:43,229 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 15:12:13] 2025-10-13 13:11:43,243 | INFO     | sufficient remaining disk space (372365066240 B)
[2025-10-13 15:12:13] 2025-10-13 13:11:43,243 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 15:12:13] 2025-10-13 13:11:43,243 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 15:12:13] 2025-10-13 13:11:43,243 | INFO     | update_server=False
[2025-10-13 15:12:13] 2025-10-13 13:11:43,243 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 15:12:13] 2025-10-13 13:11:43,243 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 15:12:13] 2025-10-13 13:11:43,243 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 15:12:13] 2025-10-13 13:11:43,244 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 15:12:13] 2025-10-13 13:11:43,244 | INFO     | aborting loop
[2025-10-13 15:12:13] 2025-10-13 13:11:43,856 | INFO     | all data control threads have been joined
[2025-10-13 15:12:13] 2025-10-13 13:11:44,103 | INFO     | all payload control threads have been joined
[2025-10-13 15:12:13] 2025-10-13 13:11:44,248 | INFO     | [job] retrieve thread has finished
[2025-10-13 15:12:13] 2025-10-13 13:11:44,249 | INFO     | [job] queue monitor thread has finished
[2025-10-13 15:12:13] 2025-10-13 13:11:44,249 | INFO     | [job] job monitor thread has finished
[2025-10-13 15:12:13] 2025-10-13 13:11:44,409 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 15:12:13] 2025-10-13 13:11:44,493 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 15:12:13] 2025-10-13 13:11:44,677 | INFO     | all job control threads have been joined
[2025-10-13 15:12:13] 2025-10-13 13:11:44,862 | INFO     | [data] control thread has finished
[2025-10-13 15:12:13] 2025-10-13 13:11:45,109 | INFO     | [payload] control thread has finished
[2025-10-13 15:12:13] 2025-10-13 13:11:45,141 | INFO     | [payload] validate_post thread has finished
[2025-10-13 15:12:13] 2025-10-13 13:11:45,218 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 15:12:13] 2025-10-13 13:11:45,244 | INFO     | [data] copytool_in thread has finished
[2025-10-13 15:12:13] 2025-10-13 13:11:45,426 | INFO     | [payload] failed_post thread has finished
[2025-10-13 15:12:13] 2025-10-13 13:11:45,505 | INFO     | [job] validate thread has finished
[2025-10-13 15:12:13] 2025-10-13 13:11:45,616 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 15:12:13] 2025-10-13 13:11:45,616 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 15:12:13] 2025-10-13 13:11:45,683 | INFO     | [job] control thread has finished
[2025-10-13 15:12:13] 2025-10-13 13:11:46,499 | INFO     | [data] copytool_out thread has finished
[2025-10-13 15:12:13] 2025-10-13 13:11:47,250 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 15:12:13] 2025-10-13 13:11:50,510 | INFO     | [monitor] cgroup control has ended
[2025-10-13 15:12:13] 2025-10-13 13:11:50,738 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140186218669888)>', '<ExcThread(monitor, started 140185568270080)>']
[2025-10-13 15:12:13] 2025-10-13 13:11:55,763 | INFO     | all workflow threads have been joined
[2025-10-13 15:12:13] 2025-10-13 13:11:55,764 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 15:12:13] 2025-10-13 13:11:55,764 | INFO     | traces error code: 0
[2025-10-13 15:12:13] 2025-10-13 13:11:55,764 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 15:12:13] 2025-10-13 13:12:13,353 | INFO     | PID=3855228 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 15:12:13] 2025-10-13 13:12:13,353 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 15:12:13] 2025-10-13 13:12:13,353 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 15:12:13] 2025-10-13 13:12:13,353 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 15:12:13] 2025-10-13 13:12:13,353 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 15:12:13] 2025-10-13 13:12:13,353 | INFO     | [monitor] control thread has ended
[2025-10-13 15:12:13] 2025-10-13 13:12:13,401 [wrapper] ==== pilot stdout END ====
[2025-10-13 15:12:13] 2025-10-13 13:12:13,403 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 15:12:13] 2025-10-13 13:12:13,406 [wrapper] pilotpid: 3855228
[2025-10-13 15:12:13] 2025-10-13 13:12:13,408 [wrapper] Pilot exit status: 0
[2025-10-13 15:12:13] 2025-10-13 13:12:13,416 [wrapper] pandaids: 6840749655
[2025-10-13 15:12:13] 2025-10-13 13:12:13,433 [wrapper] cleanup supervisor_pilot 3891035 3855229
[2025-10-13 15:12:13] 2025-10-13 13:12:13,436 [wrapper] Test setup, not cleaning
[2025-10-13 15:12:13] 2025-10-13 13:12:13,439 [wrapper] apfmon messages muted
[2025-10-13 15:12:13] 2025-10-13 13:12:13,441 [wrapper] ==== wrapper stdout END ====
[2025-10-13 15:12:13] 2025-10-13 13:12:13,444 [wrapper] ==== wrapper stderr END ====
[2025-10-13 15:12:13]  *** Error codes and diagnostics ***
[2025-10-13 15:12:13]     "exeErrorCode": 0,
[2025-10-13 15:12:13]     "exeErrorDiag": "",
[2025-10-13 15:12:13]     "pilotErrorCode": 0,
[2025-10-13 15:12:13]     "pilotErrorDiag": "",
[2025-10-13 15:12:13]  *** Listing of results directory ***
[2025-10-13 15:12:13] total 410804
[2025-10-13 15:12:13] -rw-r--r-- 1 boinc boinc    557409 Oct 12 22:43 pilot3.tar.gz
[2025-10-13 15:12:13] -rw-r--r-- 1 boinc boinc      5112 Oct 12 22:48 queuedata.json
[2025-10-13 15:12:13] -rwx------ 1 boinc boinc     36292 Oct 12 22:48 runpilot2-wrapper.sh
[2025-10-13 15:12:13] -rw-r--r-- 1 boinc boinc       100 Oct 13 13:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 15:12:13] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 13:47 run_atlas
[2025-10-13 15:12:13] -rw-r--r-- 1 boinc boinc       105 Oct 13 13:47 job.xml
[2025-10-13 15:12:13] -rw-r--r-- 2 boinc boinc 220612771 Oct 13 13:47 EVNT.46676267._004863.pool.root.1
[2025-10-13 15:12:13] -rw-r--r-- 2 boinc boinc    569684 Oct 13 13:47 input.tar.gz
[2025-10-13 15:12:13] -rw-r--r-- 2 boinc boinc     15120 Oct 13 13:47 start_atlas.sh
[2025-10-13 15:12:13] drwxrwx--x 2 boinc boinc      4096 Oct 13 13:47 shared
[2025-10-13 15:12:13] -rw-r--r-- 1 boinc boinc         0 Oct 13 13:47 boinc_setup_complete
[2025-10-13 15:12:13] -rw-r--r-- 1 boinc boinc      6450 Oct 13 13:47 init_data.xml
[2025-10-13 15:12:13] -rw-r--r-- 1 boinc boinc         0 Oct 13 13:47 boinc_lockfile
[2025-10-13 15:12:13] -rw-r--r-- 1 boinc boinc      2550 Oct 13 13:47 pandaJob.out
[2025-10-13 15:12:13] -rw------- 1 boinc boinc    972497 Oct 13 13:47 agis_schedconf.cvmfs.json
[2025-10-13 15:12:13] -rw------- 1 boinc boinc   1560580 Oct 13 13:47 agis_ddmendpoints.agis.ALL.json
[2025-10-13 15:12:13] drwx------ 5 boinc boinc      4096 Oct 13 13:47 pilot3
[2025-10-13 15:12:13] -rw------- 1 boinc boinc 194195637 Oct 13 15:11 HITS.46676269._089087.pool.root.1
[2025-10-13 15:12:13] -rw-r--r-- 1 boinc boinc       529 Oct 13 15:11 boinc_task_state.xml
[2025-10-13 15:12:13] -rw------- 1 boinc boinc      1014 Oct 13 15:11 memory_monitor_summary.json
[2025-10-13 15:12:13] -rw------- 1 boinc boinc    243497 Oct 13 15:11 log.46676269._089087.job.log.tgz.1
[2025-10-13 15:12:13] -rw------- 1 boinc boinc      7754 Oct 13 15:11 heartbeat.json
[2025-10-13 15:12:13] -rw-r--r-- 1 boinc boinc      8192 Oct 13 15:12 boinc_mmap_file
[2025-10-13 15:12:13] -rw-r--r-- 1 boinc boinc        27 Oct 13 15:12 wrapper_checkpoint.txt
[2025-10-13 15:12:13] -rw------- 1 boinc boinc       747 Oct 13 15:12 pilotlog.txt
[2025-10-13 15:12:13] -rw------- 1 boinc boinc        95 Oct 13 15:12 pilot_heartbeat.json
[2025-10-13 15:12:13] -rw------- 1 boinc boinc    738565 Oct 13 15:12 log.46676269._089087.job.log.1
[2025-10-13 15:12:13] -rw------- 1 boinc boinc       357 Oct 13 15:12 output.list
[2025-10-13 15:12:13] -rw-r--r-- 1 boinc boinc       620 Oct 13 15:12 runtime_log
[2025-10-13 15:12:13] -rw------- 1 boinc boinc   1003520 Oct 13 15:12 result.tar.gz
[2025-10-13 15:12:13] -rw-r--r-- 1 boinc boinc      8792 Oct 13 15:12 runtime_log.err
[2025-10-13 15:12:13] -rw------- 1 boinc boinc       661 Oct 13 15:12 l4KNDmuAIS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGVlNDmXhSCum.diag
[2025-10-13 15:12:13] -rw-r--r-- 1 boinc boinc      9031 Oct 13 15:12 stderr.txt
[2025-10-13 15:12:13] HITS file was successfully produced:
[2025-10-13 15:12:13] -rw------- 1 boinc boinc 194195637 Oct 13 15:11 shared/HITS.pool.root.1
[2025-10-13 15:12:13]  *** Contents of shared directory: ***
[2025-10-13 15:12:13] total 406656
[2025-10-13 15:12:13] -rw-r--r-- 2 boinc boinc 220612771 Oct 13 13:47 ATLAS.root_0
[2025-10-13 15:12:13] -rw-r--r-- 2 boinc boinc    569684 Oct 13 13:47 input.tar.gz
[2025-10-13 15:12:13] -rw-r--r-- 2 boinc boinc     15120 Oct 13 13:47 start_atlas.sh
[2025-10-13 15:12:13] -rw------- 1 boinc boinc 194195637 Oct 13 15:11 HITS.pool.root.1
[2025-10-13 15:12:13] -rw------- 1 boinc boinc   1003520 Oct 13 15:12 result.tar.gz
15:12:15 (3851479): run_atlas exited; CPU time 14423.520061
15:12:15 (3851479): called boinc_finish(0)

</stderr_txt>
]]>

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