Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:34 (770829): wrapper (7.7.26015): starting
00:03:34 (770829): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 00:03:34] Arguments: --nthreads 9
[2025-10-13 00:03:34] Threads: 9
[2025-10-13 00:03:34] Checking for CVMFS
[2025-10-13 00:03:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:03:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:03:36] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:03:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:03:38] 2.13.2.0 1056763 130197 334440 151585 -2318 1184 27004015 32935936 24861 16776704 0 105976088 99.646 96840041 27785 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:03:38] CVMFS is ok
[2025-10-13 00:03:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:03:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:03:38] Further information can be found at the LHC@home message board.
[2025-10-13 00:03:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:03:38] Checking for apptainer binary...
[2025-10-13 00:03:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:03:38] Running /usr/bin/apptainer --version
[2025-10-13 00:03:38] apptainer version 1.4.3-1.el9
[2025-10-13 00:03:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:03:39] c-4-39.aglt2.org
[2025-10-13 00:03:39] apptainer works
[2025-10-13 00:03:39] Set ATHENA_PROC_NUMBER=9
[2025-10-13 00:03:39] Set ATHENA_CORE_NUMBER=9
[2025-10-13 00:03:39] Starting ATLAS job with PandaID=6840181286
[2025-10-13 00:03:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:07:31]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:07:31] 2025-10-13 12:06:41,320 | INFO     | sum of square deviations: 31173617991.30352
[2025-10-13 08:07:31] 2025-10-13 12:06:41,324 | INFO     | sum of deviations: 435746352601.5162
[2025-10-13 08:07:31] 2025-10-13 12:06:41,324 | INFO     | mean x: 1760342682.9612904
[2025-10-13 08:07:31] 2025-10-13 12:06:41,324 | INFO     | mean y: 2293399.139784946
[2025-10-13 08:07:31] 2025-10-13 12:06:41,324 | INFO     | -- intersect: -24603862474.17387
[2025-10-13 08:07:31] 2025-10-13 12:06:41,324 | INFO     | intersect: -24603862474.17387
[2025-10-13 08:07:31] 2025-10-13 12:06:41,324 | INFO     | chi2: 4.447389221359814
[2025-10-13 08:07:31] 2025-10-13 12:06:41,324 | INFO     | current chi2=4.447389221359814 (change=0.37964189693790307 %)
[2025-10-13 08:07:31] 2025-10-13 12:06:41,324 | INFO     | right removable region: 464
[2025-10-13 08:07:31] 2025-10-13 12:06:41,325 | INFO     | sum of square deviations: 31173373748.22352
[2025-10-13 08:07:31] 2025-10-13 12:06:41,328 | INFO     | sum of deviations: 321088515848.8062
[2025-10-13 08:07:31] 2025-10-13 12:06:41,328 | INFO     | mean x: 1760342987.9591398
[2025-10-13 08:07:31] 2025-10-13 12:06:41,328 | INFO     | mean y: 2315200.5161290322
[2025-10-13 08:07:31] 2025-10-13 12:06:41,329 | INFO     | -- intersect: -18129373783.608143
[2025-10-13 08:07:31] 2025-10-13 12:06:41,329 | INFO     | intersect: -18129373783.608143
[2025-10-13 08:07:31] 2025-10-13 12:06:41,329 | INFO     | chi2: 1.204353377259788
[2025-10-13 08:07:31] 2025-10-13 12:06:41,329 | INFO     | current chi2=1.204353377259788 (change=73.0227986008006 %)
[2025-10-13 08:07:31] 2025-10-13 12:06:41,329 | INFO     | sum of square deviations: 30178440200.21525
[2025-10-13 08:07:31] 2025-10-13 12:06:41,333 | INFO     | sum of deviations: 257355011712.9545
[2025-10-13 08:07:31] 2025-10-13 12:06:41,333 | INFO     | mean x: 1760343140.4586957
[2025-10-13 08:07:31] 2025-10-13 12:06:41,333 | INFO     | mean y: 2324963.0239130436
[2025-10-13 08:07:31] 2025-10-13 12:06:41,333 | INFO     | -- intersect: -15009488985.144802
[2025-10-13 08:07:31] 2025-10-13 12:06:41,333 | INFO     | intersect: -15009488985.144802
[2025-10-13 08:07:31] 2025-10-13 12:06:41,333 | INFO     | chi2: 0.5610263944353657
[2025-10-13 08:07:31] 2025-10-13 12:06:41,334 | INFO     | current chi2=0.5610263944353657 (change=53.4167956823566 %)
[2025-10-13 08:07:31] 2025-10-13 12:06:41,334 | INFO     | sum of square deviations: 29204874097.288002
[2025-10-13 08:07:31] 2025-10-13 12:06:41,337 | INFO     | sum of deviations: 220641825330.4571
[2025-10-13 08:07:31] 2025-10-13 12:06:41,337 | INFO     | mean x: 1760343292.9604394
[2025-10-13 08:07:31] 2025-10-13 12:06:41,337 | INFO     | mean y: 2330707.9142857143
[2025-10-13 08:07:31] 2025-10-13 12:06:41,337 | INFO     | -- intersect: -13297002686.681198
[2025-10-13 08:07:31] 2025-10-13 12:06:41,338 | INFO     | intersect: -13297002686.681198
[2025-10-13 08:07:31] 2025-10-13 12:06:41,338 | INFO     | chi2: 0.3769972292218048
[2025-10-13 08:07:31] 2025-10-13 12:06:41,338 | INFO     | current chi2=0.3769972292218048 (change=32.80222945638299 %)
[2025-10-13 08:07:31] 2025-10-13 12:06:41,338 | INFO     | sum of square deviations: 28252552957.61102
[2025-10-13 08:07:31] 2025-10-13 12:06:41,341 | INFO     | sum of deviations: 198645372731.5999
[2025-10-13 08:07:31] 2025-10-13 12:06:41,342 | INFO     | mean x: 1760343445.4555554
[2025-10-13 08:07:31] 2025-10-13 12:06:41,342 | INFO     | mean y: 2334223.88
[2025-10-13 08:07:31] 2025-10-13 12:06:41,342 | INFO     | -- intersect: -12374744774.354229
[2025-10-13 08:07:31] 2025-10-13 12:06:41,342 | INFO     | intersect: -12374744774.354229
[2025-10-13 08:07:31] 2025-10-13 12:06:41,342 | INFO     | chi2: 0.3207946047937567
[2025-10-13 08:07:31] 2025-10-13 12:06:41,342 | INFO     | current chi2=0.3207946047937567 (change=14.90796750524166 %)
[2025-10-13 08:07:31] 2025-10-13 12:06:41,342 | INFO     | left removable region: 40
[2025-10-13 08:07:31] 2025-10-13 12:06:41,343 | INFO     | sum of square deviations: 23632580939.318527
[2025-10-13 08:07:31] 2025-10-13 12:06:41,346 | INFO     | sum of deviations: 146264245830.66742
[2025-10-13 08:07:31] 2025-10-13 12:06:41,346 | INFO     | mean x: 1760343872.4599056
[2025-10-13 08:07:31] 2025-10-13 12:06:41,346 | INFO     | mean y: 2339008.1863207547
[2025-10-13 08:07:31] 2025-10-13 12:06:41,346 | INFO     | -- intersect: -10892593270.649632
[2025-10-13 08:07:31] 2025-10-13 12:06:41,346 | INFO     | intersect: -10892593270.649632
[2025-10-13 08:07:31] 2025-10-13 12:06:41,346 | INFO     | chi2: 0.2719106859503509
[2025-10-13 08:07:31] 2025-10-13 12:06:41,347 | INFO     | -- intersect: -10892593270.649632
[2025-10-13 08:07:31] 2025-10-13 12:06:41,347 | INFO     | current memory leak: 6.19 B/s (using 424 data points, chi2=0.27)
[2025-10-13 08:07:31] 2025-10-13 12:06:41,347 | INFO     | could have reported an average CPU frequency of 2612 MHz (19 samples)
[2025-10-13 08:07:31] 2025-10-13 12:06:41,347 | INFO     | ..............................
[2025-10-13 08:07:31] 2025-10-13 12:06:41,347 | INFO     | . Timing measurements:
[2025-10-13 08:07:31] 2025-10-13 12:06:41,347 | INFO     | . get job = 0 s
[2025-10-13 08:07:31] 2025-10-13 12:06:41,347 | INFO     | . initial setup = 12 s
[2025-10-13 08:07:31] 2025-10-13 12:06:41,347 | INFO     | . payload setup = 51 s
[2025-10-13 08:07:31] 2025-10-13 12:06:41,348 | INFO     | . stage-in = 0 s
[2025-10-13 08:07:31] 2025-10-13 12:06:41,348 | INFO     | . payload execution = 28703 s
[2025-10-13 08:07:31] 2025-10-13 12:06:41,348 | INFO     | . stage-out = 2 s
[2025-10-13 08:07:31] 2025-10-13 12:06:41,348 | INFO     | . log creation = 0 s
[2025-10-13 08:07:31] 2025-10-13 12:06:41,348 | INFO     | ..............................
[2025-10-13 08:07:31] 2025-10-13 12:06:41,407 | INFO     | 
[2025-10-13 08:07:31] 2025-10-13 12:06:41,407 | INFO     | job summary report
[2025-10-13 08:07:31] 2025-10-13 12:06:41,408 | INFO     | --------------------------------------------------
[2025-10-13 08:07:31] 2025-10-13 12:06:41,408 | INFO     | PanDA job id: 6840181286
[2025-10-13 08:07:31] 2025-10-13 12:06:41,408 | INFO     | task id: 46676269
[2025-10-13 08:07:31] 2025-10-13 12:06:41,408 | INFO     | errors: (none)
[2025-10-13 08:07:31] 2025-10-13 12:06:41,408 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 08:07:31] 2025-10-13 12:06:41,408 | INFO     | pilot state: finished 
[2025-10-13 08:07:31] 2025-10-13 12:06:41,408 | INFO     | transexitcode: 0
[2025-10-13 08:07:31] 2025-10-13 12:06:41,408 | INFO     | exeerrorcode: 0
[2025-10-13 08:07:31] 2025-10-13 12:06:41,408 | INFO     | exeerrordiag: 
[2025-10-13 08:07:31] 2025-10-13 12:06:41,408 | INFO     | exitcode: 0
[2025-10-13 08:07:31] 2025-10-13 12:06:41,409 | INFO     | exitmsg: OK
[2025-10-13 08:07:31] 2025-10-13 12:06:41,409 | INFO     | cpuconsumptiontime: 52730 s
[2025-10-13 08:07:31] 2025-10-13 12:06:41,409 | INFO     | nevents: 400
[2025-10-13 08:07:31] 2025-10-13 12:06:41,409 | INFO     | neventsw: 0
[2025-10-13 08:07:31] 2025-10-13 12:06:41,409 | INFO     | pid: 796710
[2025-10-13 08:07:31] 2025-10-13 12:06:41,409 | INFO     | pgrp: 796710
[2025-10-13 08:07:31] 2025-10-13 12:06:41,409 | INFO     | corecount: 9
[2025-10-13 08:07:31] 2025-10-13 12:06:41,409 | INFO     | event service: False
[2025-10-13 08:07:31] 2025-10-13 12:06:41,409 | INFO     | sizes: {0: 2347928, 1: 2348529, 2: 2348613, 5: 2348697, 6: 2348868, 8: 2348896, 19: 2349052, 31: 2349080, 42: 2349108, 53: 2349164, 56: 2349454, 65: 2349762, 28759
[2025-10-13 08:07:31] 2025-10-13 12:06:41,409 | INFO     | --------------------------------------------------
[2025-10-13 08:07:31] 2025-10-13 12:06:41,410 | INFO     | 
[2025-10-13 08:07:31] 2025-10-13 12:06:41,410 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 08:07:31] 2025-10-13 12:06:41,430 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 08:07:31] 2025-10-13 12:06:41,431 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 08:07:31] 2025-10-13 12:06:41,431 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 08:07:31] 2025-10-13 12:06:41,431 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 08:07:31] 2025-10-13 12:06:41,431 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 08:07:31] 2025-10-13 12:06:41,431 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 08:07:31] 2025-10-13 12:06:41,431 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 08:07:31] 2025-10-13 12:06:41,431 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 08:07:31] 2025-10-13 12:06:41,432 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 08:07:31] 2025-10-13 12:06:41,432 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 08:07:31] 2025-10-13 12:06:41,432 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 08:07:31] 2025-10-13 12:06:41,432 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 08:07:31] 2025-10-13 12:06:41,432 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 08:07:31] 2025-10-13 12:06:41,432 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 08:07:31] 2025-10-13 12:06:41,432 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 08:07:31] 2025-10-13 12:06:41,432 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 08:07:31] 2025-10-13 12:06:41,433 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 08:07:31] 2025-10-13 12:06:41,433 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 08:07:31] 2025-10-13 12:06:41,433 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 08:07:31] 2025-10-13 12:06:41,433 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 08:07:31] 2025-10-13 12:06:41,433 | INFO     | job 6840181286 has completed (purged errors)
[2025-10-13 08:07:31] 2025-10-13 12:06:41,433 | INFO     | overall cleanup function is called
[2025-10-13 08:07:31] 2025-10-13 12:06:42,442 | INFO     | --- collectZombieJob: --- 10, [796710]
[2025-10-13 08:07:31] 2025-10-13 12:06:42,442 | INFO     | zombie collector waiting for pid 796710
[2025-10-13 08:07:31] 2025-10-13 12:06:42,443 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 08:07:31] 2025-10-13 12:06:42,443 | INFO     | collected zombie processes
[2025-10-13 08:07:31] 2025-10-13 12:06:42,443 | INFO     | will attempt to kill all subprocesses of pid=796710
[2025-10-13 08:07:31] 2025-10-13 12:06:42,798 | INFO     | process IDs to be killed: [796710] (in reverse order)
[2025-10-13 08:07:31] 2025-10-13 12:06:42,894 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 08:07:31] 2025-10-13 12:06:42,894 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 08:07:31] 2025-10-13 12:06:42,907 | INFO     | did not find any defunct processes belonging to 796710
[2025-10-13 08:07:31] 2025-10-13 12:06:42,920 | INFO     | did not find any defunct processes belonging to 796710
[2025-10-13 08:07:31] 2025-10-13 12:06:42,920 | INFO     | ready for new job
[2025-10-13 08:07:31] 2025-10-13 12:06:42,920 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 08:07:31] 2025-10-13 12:06:42,923 | INFO     | ***************************************
[2025-10-13 08:07:31] 2025-10-13 12:06:42,924 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 08:07:31] 2025-10-13 12:06:42,924 | INFO     | ***************************************
[2025-10-13 08:07:31] 2025-10-13 12:06:42,924 | INFO     | 
[2025-10-13 08:07:31] 2025-10-13 12:06:42,938 | INFO     | architecture information:
[2025-10-13 08:07:31] 2025-10-13 12:06:42,938 | INFO     | executing command: cat /etc/os-release
[2025-10-13 08:07:31] 2025-10-13 12:06:42,953 | INFO     | cat /etc/os-release:
[2025-10-13 08:07:31] NAME="CentOS Linux"
[2025-10-13 08:07:31] VERSION="7 (Core)"
[2025-10-13 08:07:31] ID="centos"
[2025-10-13 08:07:31] ID_LIKE="rhel fedora"
[2025-10-13 08:07:31] VERSION_ID="7"
[2025-10-13 08:07:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 08:07:31] ANSI_COLOR="0;31"
[2025-10-13 08:07:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 08:07:31] HOME_URL="https://www.centos.org/"
[2025-10-13 08:07:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 08:07:31] 
[2025-10-13 08:07:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 08:07:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 08:07:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 08:07:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 08:07:31] 
[2025-10-13 08:07:31] 2025-10-13 12:06:42,953 | INFO     | ***************************************
[2025-10-13 08:07:31] 2025-10-13 12:06:43,454 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 08:07:31] 2025-10-13 12:06:43,471 | INFO     | sufficient remaining disk space (75669438464 B)
[2025-10-13 08:07:31] 2025-10-13 12:06:43,471 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 08:07:31] 2025-10-13 12:06:43,472 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 08:07:31] 2025-10-13 12:06:43,472 | INFO     | update_server=False
[2025-10-13 08:07:31] 2025-10-13 12:06:43,472 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 08:07:31] 2025-10-13 12:06:43,472 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:07:31] 2025-10-13 12:06:43,906 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 08:07:31] 2025-10-13 12:06:43,906 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 08:07:31] 2025-10-13 12:06:43,906 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:07:31] 2025-10-13 12:06:43,907 | INFO     | will abort loop
[2025-10-13 08:07:31] 2025-10-13 12:06:44,320 | INFO     | all data control threads have been joined
[2025-10-13 08:07:31] 2025-10-13 12:06:44,476 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:07:31] 2025-10-13 12:06:44,542 | INFO     | all payload control threads have been joined
[2025-10-13 08:07:31] 2025-10-13 12:06:44,639 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:07:31] 2025-10-13 12:06:44,745 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:07:31] 2025-10-13 12:06:44,785 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:07:31] 2025-10-13 12:06:44,854 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:07:31] 2025-10-13 12:06:44,911 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:07:31] 2025-10-13 12:06:45,106 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:07:31] 2025-10-13 12:06:45,154 | INFO     | all job control threads have been joined
[2025-10-13 08:07:31] 2025-10-13 12:06:45,325 | INFO     | [data] control thread has finished
[2025-10-13 08:07:31] 2025-10-13 12:06:45,431 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:07:31] 2025-10-13 12:06:45,432 | INFO     | [job] validate thread has finished
[2025-10-13 08:07:31] 2025-10-13 12:06:45,547 | INFO     | [payload] control thread has finished
[2025-10-13 08:07:31] 2025-10-13 12:06:45,973 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:07:31] 2025-10-13 12:06:46,160 | INFO     | [job] control thread has finished
[2025-10-13 08:07:31] 2025-10-13 12:06:46,419 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:07:31] 2025-10-13 12:06:46,749 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:07:31] 2025-10-13 12:06:47,424 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:07:31] 2025-10-13 12:06:47,478 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:07:31] 2025-10-13 12:06:53,613 | INFO     | job.realtimelogging is not enabled
[2025-10-13 08:07:31] 2025-10-13 12:06:54,618 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:07:31] 2025-10-13 12:07:14,807 | INFO     | PID=779964 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 08:07:31] 2025-10-13 12:07:14,808 | INFO     | .. there are 24 such processes running
[2025-10-13 08:07:31] 2025-10-13 12:07:14,809 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 08:07:31] 2025-10-13 12:07:14,809 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 08:07:31] 2025-10-13 12:07:14,810 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:07:31] 2025-10-13 12:07:24,504 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:07:31] 2025-10-13 12:07:26,586 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139939832887104)>', '<ExcThread(monitor, started 139939329062656)>']
[2025-10-13 08:07:31] 2025-10-13 12:07:26,868 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:07:31] 2025-10-13 12:07:26,868 | INFO     | [monitor] control thread has ended
[2025-10-13 08:07:31] 2025-10-13 12:07:31,612 | INFO     | all workflow threads have been joined
[2025-10-13 08:07:31] 2025-10-13 12:07:31,612 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:07:31] 2025-10-13 12:07:31,612 | INFO     | traces error code: 0
[2025-10-13 08:07:31] 2025-10-13 12:07:31,613 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:07:31] 2025-10-13 12:07:31,786 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:07:31] 2025-10-13 12:07:31,788 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:07:31] 2025-10-13 12:07:31,791 [wrapper] pilotpid: 779964
[2025-10-13 08:07:31] 2025-10-13 12:07:31,794 [wrapper] Pilot exit status: 0
[2025-10-13 08:07:31] 2025-10-13 12:07:31,803 [wrapper] pandaids: 6840181286
[2025-10-13 08:07:31] 2025-10-13 12:07:31,871 [wrapper] cleanup supervisor_pilot 2216314 779965
[2025-10-13 08:07:31] 2025-10-13 12:07:31,873 [wrapper] Test setup, not cleaning
[2025-10-13 08:07:31] 2025-10-13 12:07:31,875 [wrapper] apfmon messages muted
[2025-10-13 08:07:31] 2025-10-13 12:07:31,877 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:07:31] 2025-10-13 12:07:31,879 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:07:31]  *** Error codes and diagnostics ***
[2025-10-13 08:07:31]     "exeErrorCode": 0,
[2025-10-13 08:07:31]     "exeErrorDiag": "",
[2025-10-13 08:07:31]     "pilotErrorCode": 0,
[2025-10-13 08:07:31]     "pilotErrorDiag": "",
[2025-10-13 08:07:31]  *** Listing of results directory ***
[2025-10-13 08:07:31] total 419584
[2025-10-13 08:07:31] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 09:55 pilot3.tar.gz
[2025-10-13 08:07:31] -rwx------. 1 boincer umatlas     36292 Oct 12 10:05 runpilot2-wrapper.sh
[2025-10-13 08:07:31] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 10:05 queuedata.json
[2025-10-13 08:07:31] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:07:31] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:03 run_atlas
[2025-10-13 08:07:31] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:03 job.xml
[2025-10-13 08:07:31] -rw-r--r--. 2 boincer umatlas 218528592 Oct 13 00:03 EVNT.46676267._001882.pool.root.1
[2025-10-13 08:07:31] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:03 start_atlas.sh
[2025-10-13 08:07:31] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:03 shared
[2025-10-13 08:07:31] -rw-r--r--. 2 boincer umatlas    569680 Oct 13 00:03 input.tar.gz
[2025-10-13 08:07:31] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:03 boinc_lockfile
[2025-10-13 08:07:31] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 00:03 pandaJob.out
[2025-10-13 08:07:31] -rw-------. 1 boincer umatlas    975520 Oct 13 00:05 agis_schedconf.cvmfs.json
[2025-10-13 08:07:31] drwx------. 5 boincer umatlas      4096 Oct 13 00:05 pilot3
[2025-10-13 08:07:31] -rw-r--r--. 1 boincer umatlas      6658 Oct 13 08:03 init_data.xml
[2025-10-13 08:07:31] -rw-------. 1 boincer umatlas 199002499 Oct 13 08:05 HITS.46676269._080245.pool.root.1
[2025-10-13 08:07:31] -rw-r--r--. 1 boincer umatlas       531 Oct 13 08:05 boinc_task_state.xml
[2025-10-13 08:07:31] -rw-------. 1 boincer umatlas      1050 Oct 13 08:06 memory_monitor_summary.json
[2025-10-13 08:07:31] -rw-------. 1 boincer umatlas   1560580 Oct 13 08:06 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:07:31] -rw-------. 1 boincer umatlas    667144 Oct 13 08:06 log.46676269._080245.job.log.tgz.1
[2025-10-13 08:07:31] -rw-------. 1 boincer umatlas      7843 Oct 13 08:06 heartbeat.json
[2025-10-13 08:07:31] -rw-------. 1 boincer umatlas        95 Oct 13 08:07 pilot_heartbeat.json
[2025-10-13 08:07:31] -rw-r--r--. 1 boincer umatlas        28 Oct 13 08:07 wrapper_checkpoint.txt
[2025-10-13 08:07:31] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 08:07 boinc_mmap_file
[2025-10-13 08:07:31] -rw-------. 1 boincer umatlas      5081 Oct 13 08:07 pilotlog.txt
[2025-10-13 08:07:31] -rw-------. 1 boincer umatlas   3441826 Oct 13 08:07 log.46676269._080245.job.log.1
[2025-10-13 08:07:31] -rw-------. 1 boincer umatlas       357 Oct 13 08:07 output.list
[2025-10-13 08:07:31] -rw-r--r--. 1 boincer umatlas       620 Oct 13 08:07 runtime_log
[2025-10-13 08:07:31] -rw-------. 1 boincer umatlas   4126720 Oct 13 08:07 result.tar.gz
[2025-10-13 08:07:31] -rw-------. 1 boincer umatlas       654 Oct 13 08:07 wRpKDmesBS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmu2TMDmRpCwLn.diag
[2025-10-13 08:07:31] -rw-r--r--. 1 boincer umatlas      8694 Oct 13 08:07 runtime_log.err
[2025-10-13 08:07:31] -rw-r--r--. 1 boincer umatlas     21080 Oct 13 08:07 stderr.txt
[2025-10-13 08:07:31] HITS file was successfully produced:
[2025-10-13 08:07:31] -rw-------. 1 boincer umatlas 199002499 Oct 13 08:05 shared/HITS.pool.root.1
[2025-10-13 08:07:31]  *** Contents of shared directory: ***
[2025-10-13 08:07:31] total 412364
[2025-10-13 08:07:31] -rw-r--r--. 2 boincer umatlas 218528592 Oct 13 00:03 ATLAS.root_0
[2025-10-13 08:07:31] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:03 start_atlas.sh
[2025-10-13 08:07:31] -rw-r--r--. 2 boincer umatlas    569680 Oct 13 00:03 input.tar.gz
[2025-10-13 08:07:31] -rw-------. 1 boincer umatlas 199002499 Oct 13 08:05 HITS.pool.root.1
[2025-10-13 08:07:31] -rw-------. 1 boincer umatlas   4126720 Oct 13 08:07 result.tar.gz
08:07:33 (770829): run_atlas exited; CPU time 53810.236926
08:07:33 (770829): called boinc_finish(0)

</stderr_txt>
]]>

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