Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:35:49 (3898752): wrapper (7.7.26015): starting
14:35:49 (3898752): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 14:35:49] Arguments: --nthreads 4
[2025-10-13 14:35:49] Threads: 4
[2025-10-13 14:35:49] Checking for CVMFS
[2025-10-13 14:35:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 14:35:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 14:35:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 14:35:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 14:35:50] 2.9.2.0 1861142 5648 99032 151661 2 57 23265202 36864001 0 130560 0 5171956 99.992 201510 902 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 14:35:50] CVMFS is ok
[2025-10-13 14:35:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 14:35:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 14:35:50] Further information can be found at the LHC@home message board.
[2025-10-13 14:35:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 14:35:50] Checking for apptainer binary...
[2025-10-13 14:35:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 14:35:50] Running /usr/bin/apptainer --version
[2025-10-13 14:35:50] apptainer version 1.4.1-1.1
[2025-10-13 14:35:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 14:35:50] thA319
[2025-10-13 14:35:50] apptainer works
[2025-10-13 14:35:50] Set ATHENA_PROC_NUMBER=4
[2025-10-13 14:35:50] Set ATHENA_CORE_NUMBER=4
[2025-10-13 14:35:50] Starting ATLAS job with PandaID=6840749312
[2025-10-13 14:35:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 15:45:28]  *** The last 200 lines of the pilot log: ***
[2025-10-13 15:45:28] 2025-10-13 13:44:58,465 | INFO     | update_server=False
[2025-10-13 15:45:28] 2025-10-13 13:44:58,465 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 15:45:28] 2025-10-13 13:44:58,465 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 15:45:28] 2025-10-13 13:44:58,699 | INFO     | all data control threads have been joined
[2025-10-13 15:45:28] 2025-10-13 13:44:58,878 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 15:45:28] 2025-10-13 13:44:58,878 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 15:45:28] 2025-10-13 13:44:58,878 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 15:45:28] 2025-10-13 13:44:58,878 | INFO     | will abort loop
[2025-10-13 15:45:28] 2025-10-13 13:44:59,074 | INFO     | all payload control threads have been joined
[2025-10-13 15:45:28] 2025-10-13 13:44:59,203 | INFO     | all job control threads have been joined
[2025-10-13 15:45:28] 2025-10-13 13:44:59,358 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 15:45:28] 2025-10-13 13:44:59,470 | INFO     | [job] queue monitor thread has finished
[2025-10-13 15:45:28] 2025-10-13 13:44:59,471 | INFO     | [job] retrieve thread has finished
[2025-10-13 15:45:28] 2025-10-13 13:44:59,663 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 15:45:28] 2025-10-13 13:44:59,705 | INFO     | [data] control thread has finished
[2025-10-13 15:45:28] 2025-10-13 13:44:59,884 | INFO     | [job] job monitor thread has finished
[2025-10-13 15:45:28] 2025-10-13 13:44:59,986 | INFO     | [payload] validate_post thread has finished
[2025-10-13 15:45:28] 2025-10-13 13:45:00,080 | INFO     | [payload] control thread has finished
[2025-10-13 15:45:28] 2025-10-13 13:45:00,209 | INFO     | [job] control thread has finished
[2025-10-13 15:45:28] 2025-10-13 13:45:00,296 | INFO     | [job] validate thread has finished
[2025-10-13 15:45:28] 2025-10-13 13:45:00,417 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 15:45:28] 2025-10-13 13:45:00,477 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 15:45:28] 2025-10-13 13:45:00,722 | INFO     | [data] copytool_in thread has finished
[2025-10-13 15:45:28] 2025-10-13 13:45:00,949 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 15:45:28] 2025-10-13 13:45:01,033 | INFO     | [payload] failed_post thread has finished
[2025-10-13 15:45:28] 2025-10-13 13:45:01,364 | INFO     | [data] copytool_out thread has finished
[2025-10-13 15:45:28] 2025-10-13 13:45:02,386 | INFO     | [monitor] cgroup control has ended
[2025-10-13 15:45:28] 2025-10-13 13:45:03,666 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 15:45:28] 2025-10-13 13:45:08,591 | INFO     | job.realtimelogging is not enabled
[2025-10-13 15:45:28] 2025-10-13 13:45:09,597 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 15:45:28] 2025-10-13 13:45:09,773 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139836390594368)>', '<ExcThread(monitor, started 139835578758912)>']
[2025-10-13 15:45:28] 2025-10-13 13:45:14,778 | INFO     | all workflow threads have been joined
[2025-10-13 15:45:28] 2025-10-13 13:45:14,778 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 15:45:28] 2025-10-13 13:45:14,779 | INFO     | traces error code: 0
[2025-10-13 15:45:28] 2025-10-13 13:45:14,779 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 15:45:28] 2025-10-13 13:45:28,694 | INFO     | PID=3902548 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 15:45:28] 2025-10-13 13:45:28,695 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 15:45:28] 2025-10-13 13:45:28,695 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 15:45:28] 2025-10-13 13:45:28,695 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 15:45:28] 2025-10-13 13:45:28,695 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 15:45:28] 2025-10-13 13:45:28,695 | INFO     | [monitor] control thread has ended
[2025-10-13 15:45:28] 2025-10-13 13:45:28,761 [wrapper] ==== pilot stdout END ====
[2025-10-13 15:45:28] 2025-10-13 13:45:28,765 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 15:45:28] 2025-10-13 13:45:28,768 [wrapper] pilotpid: 3902548
[2025-10-13 15:45:28] 2025-10-13 13:45:28,772 [wrapper] Pilot exit status: 0
[2025-10-13 15:45:28] 2025-10-13 13:45:28,784 [wrapper] pandaids: 6840749312
[2025-10-13 15:45:28] 2025-10-13 13:45:28,806 [wrapper] cleanup supervisor_pilot 3920015 3902549
[2025-10-13 15:45:28] 2025-10-13 13:45:28,809 [wrapper] Test setup, not cleaning
[2025-10-13 15:45:28] 2025-10-13 13:45:28,813 [wrapper] apfmon messages muted
[2025-10-13 15:45:28] 2025-10-13 13:45:28,817 [wrapper] ==== wrapper stdout END ====
[2025-10-13 15:45:28] 2025-10-13 13:45:28,820 [wrapper] ==== wrapper stderr END ====
[2025-10-13 15:45:28]  *** Error codes and diagnostics ***
[2025-10-13 15:45:28]     "exeErrorCode": 0,
[2025-10-13 15:45:28]     "exeErrorDiag": "",
[2025-10-13 15:45:28]     "pilotErrorCode": 0,
[2025-10-13 15:45:28]     "pilotErrorDiag": "",
[2025-10-13 15:45:28]  *** Listing of results directory ***
[2025-10-13 15:45:28] total 410248
[2025-10-13 15:45:28] -rw-r--r-- 1 boinc boinc    557409 Oct 12 22:23 pilot3.tar.gz
[2025-10-13 15:45:28] -rwx------ 1 boinc boinc     36292 Oct 12 22:35 runpilot2-wrapper.sh
[2025-10-13 15:45:28] -rw-r--r-- 1 boinc boinc      5112 Oct 12 22:35 queuedata.json
[2025-10-13 15:45:28] -rw-r--r-- 1 boinc boinc       100 Oct 13 14:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 15:45:28] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 14:35 run_atlas
[2025-10-13 15:45:28] -rw-r--r-- 1 boinc boinc       105 Oct 13 14:35 job.xml
[2025-10-13 15:45:28] -rw-r--r-- 2 boinc boinc 224055312 Oct 13 14:35 EVNT.46676267._004852.pool.root.1
[2025-10-13 15:45:28] -rw-r--r-- 2 boinc boinc    569680 Oct 13 14:35 input.tar.gz
[2025-10-13 15:45:28] -rw-r--r-- 2 boinc boinc     15120 Oct 13 14:35 start_atlas.sh
[2025-10-13 15:45:28] drwxrwx--x 2 boinc boinc      4096 Oct 13 14:35 shared
[2025-10-13 15:45:28] -rw-r--r-- 1 boinc boinc         0 Oct 13 14:35 boinc_setup_complete
[2025-10-13 15:45:28] -rw-r--r-- 1 boinc boinc      6370 Oct 13 14:35 init_data.xml
[2025-10-13 15:45:28] -rw-r--r-- 1 boinc boinc         0 Oct 13 14:35 boinc_lockfile
[2025-10-13 15:45:28] -rw-r--r-- 1 boinc boinc      2550 Oct 13 14:35 pandaJob.out
[2025-10-13 15:45:28] -rw------- 1 boinc boinc    972497 Oct 13 14:35 agis_schedconf.cvmfs.json
[2025-10-13 15:45:28] -rw------- 1 boinc boinc   1560580 Oct 13 14:35 agis_ddmendpoints.agis.ALL.json
[2025-10-13 15:45:28] drwx------ 5 boinc boinc      4096 Oct 13 14:35 pilot3
[2025-10-13 15:45:28] -rw------- 1 boinc boinc 190369916 Oct 13 15:44 HITS.46676269._088833.pool.root.1
[2025-10-13 15:45:28] -rw-r--r-- 1 boinc boinc       530 Oct 13 15:44 boinc_task_state.xml
[2025-10-13 15:45:28] -rw------- 1 boinc boinc      1019 Oct 13 15:44 memory_monitor_summary.json
[2025-10-13 15:45:28] -rw------- 1 boinc boinc    273400 Oct 13 15:44 log.46676269._088833.job.log.tgz.1
[2025-10-13 15:45:28] -rw------- 1 boinc boinc      7764 Oct 13 15:44 heartbeat.json
[2025-10-13 15:45:28] -rw-r--r-- 1 boinc boinc      8192 Oct 13 15:45 boinc_mmap_file
[2025-10-13 15:45:28] -rw-r--r-- 1 boinc boinc        27 Oct 13 15:45 wrapper_checkpoint.txt
[2025-10-13 15:45:28] -rw------- 1 boinc boinc       747 Oct 13 15:45 pilotlog.txt
[2025-10-13 15:45:28] -rw------- 1 boinc boinc        95 Oct 13 15:45 pilot_heartbeat.json
[2025-10-13 15:45:28] -rw------- 1 boinc boinc    617512 Oct 13 15:45 log.46676269._088833.job.log.1
[2025-10-13 15:45:28] -rw------- 1 boinc boinc       357 Oct 13 15:45 output.list
[2025-10-13 15:45:28] -rw-r--r-- 1 boinc boinc       620 Oct 13 15:45 runtime_log
[2025-10-13 15:45:28] -rw------- 1 boinc boinc    911360 Oct 13 15:45 result.tar.gz
[2025-10-13 15:45:28] -rw-r--r-- 1 boinc boinc      8777 Oct 13 15:45 runtime_log.err
[2025-10-13 15:45:28] -rw------- 1 boinc boinc       658 Oct 13 15:45 0EnNDmkxHS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm5xUMDmOX9lMn.diag
[2025-10-13 15:45:28] -rw-r--r-- 1 boinc boinc      7738 Oct 13 15:45 stderr.txt
[2025-10-13 15:45:28] HITS file was successfully produced:
[2025-10-13 15:45:28] -rw------- 1 boinc boinc 190369916 Oct 13 15:44 shared/HITS.pool.root.1
[2025-10-13 15:45:28]  *** Contents of shared directory: ***
[2025-10-13 15:45:28] total 406196
[2025-10-13 15:45:28] -rw-r--r-- 2 boinc boinc 224055312 Oct 13 14:35 ATLAS.root_0
[2025-10-13 15:45:28] -rw-r--r-- 2 boinc boinc    569680 Oct 13 14:35 input.tar.gz
[2025-10-13 15:45:28] -rw-r--r-- 2 boinc boinc     15120 Oct 13 14:35 start_atlas.sh
[2025-10-13 15:45:28] -rw------- 1 boinc boinc 190369916 Oct 13 15:44 HITS.pool.root.1
[2025-10-13 15:45:28] -rw------- 1 boinc boinc    911360 Oct 13 15:45 result.tar.gz
15:45:30 (3898752): run_atlas exited; CPU time 15579.923037
15:45:30 (3898752): called boinc_finish(0)

</stderr_txt>
]]>

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