Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:35:34 (2423648): wrapper (7.7.26015): starting
14:35:34 (2423648): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 14:35:34] Arguments: --nthreads 4
[2025-10-13 14:35:34] Threads: 4
[2025-10-13 14:35:34] Checking for CVMFS
[2025-10-13 14:35:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 14:35:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 14:35:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 14:35:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 14:35:35] 2.9.2.0 287733 5821 99160 151661 1 56 22562609 36864000 0 130560 0 5570033 99.993 197858 878 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 14:35:35] CVMFS is ok
[2025-10-13 14:35:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 14:35:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 14:35:35] Further information can be found at the LHC@home message board.
[2025-10-13 14:35:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 14:35:35] Checking for apptainer binary...
[2025-10-13 14:35:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 14:35:35] Running /usr/bin/apptainer --version
[2025-10-13 14:35:35] apptainer version 1.4.1-1.1
[2025-10-13 14:35:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 14:35:35] thA373a
[2025-10-13 14:35:35] apptainer works
[2025-10-13 14:35:35] Set ATHENA_PROC_NUMBER=4
[2025-10-13 14:35:35] Set ATHENA_CORE_NUMBER=4
[2025-10-13 14:35:35] Starting ATLAS job with PandaID=6840850069
[2025-10-13 14:35:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 14:39:49]  *** The last 200 lines of the pilot log: ***
[2025-10-13 14:39:49] 2025-10-13 12:38:55,955 | INFO     | [job] queue monitor thread has finished
[2025-10-13 14:39:49] 2025-10-13 12:38:55,959 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 14:39:49] 2025-10-13 12:38:55,994 | INFO     | [data] copytool_in thread has finished
[2025-10-13 14:39:49] 2025-10-13 12:38:56,060 | INFO     | [payload] failed_post thread has finished
[2025-10-13 14:39:49] 2025-10-13 12:38:56,166 | INFO     | [data] control thread has finished
[2025-10-13 14:39:49] 2025-10-13 12:38:56,195 | INFO     | [payload] validate_post thread has finished
[2025-10-13 14:39:49] 2025-10-13 12:38:56,780 | INFO     | [payload] control thread has finished
[2025-10-13 14:39:49] 2025-10-13 12:38:56,792 | INFO     | [job] validate thread has finished
[2025-10-13 14:39:49] 2025-10-13 12:38:56,902 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 14:39:49] 2025-10-13 12:38:56,940 | INFO     | [job] control thread has finished
[2025-10-13 14:39:49] 2025-10-13 12:38:56,968 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 14:39:49] 2025-10-13 12:38:57,108 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 14:39:49] 2025-10-13 12:38:57,218 | INFO     | [data] copytool_out thread has finished
[2025-10-13 14:39:49] 2025-10-13 12:38:57,286 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 14:39:49] 2025-10-13 12:38:59,966 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 14:39:49] 2025-10-13 12:39:25,952 | INFO     | PID=2427430 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 14:39:49] 2025-10-13 12:39:25,952 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 14:39:49] 2025-10-13 12:39:25,952 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 14:39:49] 2025-10-13 12:39:25,952 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 14:39:49] 2025-10-13 12:39:43,001 | INFO     | [monitor] cgroup control has ended
[2025-10-13 14:39:49] 2025-10-13 12:39:43,980 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140324032948032)>', '<ExcThread(monitor, started 140322998830848)>']
[2025-10-13 14:39:49] 2025-10-13 12:39:44,042 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 14:39:49] 2025-10-13 12:39:44,042 | INFO     | [monitor] control thread has ended
[2025-10-13 14:39:49] 2025-10-13 12:39:49,005 | INFO     | all workflow threads have been joined
[2025-10-13 14:39:49] 2025-10-13 12:39:49,005 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 14:39:49] 2025-10-13 12:39:49,005 | INFO     | traces error code: 0
[2025-10-13 14:39:49] 2025-10-13 12:39:49,006 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 14:39:49] 2025-10-13 12:39:49,083 [wrapper] ==== pilot stdout END ====
[2025-10-13 14:39:49] 2025-10-13 12:39:49,087 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 14:39:49] 2025-10-13 12:39:49,091 [wrapper] pilotpid: 2427430
[2025-10-13 14:39:49] 2025-10-13 12:39:49,095 [wrapper] Pilot exit status: 0
[2025-10-13 14:39:49] 2025-10-13 12:39:49,106 [wrapper] pandaids: 6840850069
[2025-10-13 14:39:49] 2025-10-13 12:39:49,129 [wrapper] cleanup supervisor_pilot 2427436 2427431
[2025-10-13 14:39:49] 2025-10-13 12:39:49,132 [wrapper] Test setup, not cleaning
[2025-10-13 14:39:49] 2025-10-13 12:39:49,137 [wrapper] apfmon messages muted
[2025-10-13 14:39:49] 2025-10-13 12:39:49,140 [wrapper] ==== wrapper stdout END ====
[2025-10-13 14:39:49] 2025-10-13 12:39:49,144 [wrapper] ==== wrapper stderr END ====
[2025-10-13 14:39:49]  *** Error codes and diagnostics ***
[2025-10-13 14:39:49]     "exeErrorCode": 65,
[2025-10-13 14:39:49]     "exeErrorDiag": "EVNTtoHITS got a SIGHUP signal (exit code 129)",
[2025-10-13 14:39:49]     "pilotErrorCode": 1305,
[2025-10-13 14:39:49]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGHUP signal (exit code 129)",
[2025-10-13 14:39:49]  *** Listing of results directory ***
[2025-10-13 14:39:49] total 216900
[2025-10-13 14:39:49] -rw-r--r-- 1 boinc boinc    557409 Oct 12 23:57 pilot3.tar.gz
[2025-10-13 14:39:49] -rw-r--r-- 1 boinc boinc      5112 Oct 13 00:06 queuedata.json
[2025-10-13 14:39:49] -rwx------ 1 boinc boinc     36292 Oct 13 00:06 runpilot2-wrapper.sh
[2025-10-13 14:39:49] -rw-r--r-- 1 boinc boinc       100 Oct 13 14:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 14:39:49] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 14:35 run_atlas
[2025-10-13 14:39:49] -rw-r--r-- 1 boinc boinc       105 Oct 13 14:35 job.xml
[2025-10-13 14:39:49] -rw-r--r-- 2 boinc boinc 217973139 Oct 13 14:35 EVNT.46676267._004059.pool.root.1
[2025-10-13 14:39:49] -rw-r--r-- 2 boinc boinc    569683 Oct 13 14:35 input.tar.gz
[2025-10-13 14:39:49] -rw-r--r-- 2 boinc boinc     15120 Oct 13 14:35 start_atlas.sh
[2025-10-13 14:39:49] drwxrwx--x 2 boinc boinc      4096 Oct 13 14:35 shared
[2025-10-13 14:39:49] -rw-r--r-- 1 boinc boinc         0 Oct 13 14:35 boinc_setup_complete
[2025-10-13 14:39:49] -rw-r--r-- 1 boinc boinc      6376 Oct 13 14:35 init_data.xml
[2025-10-13 14:39:49] -rw-r--r-- 1 boinc boinc         0 Oct 13 14:35 boinc_lockfile
[2025-10-13 14:39:49] -rw-r--r-- 1 boinc boinc      2550 Oct 13 14:35 pandaJob.out
[2025-10-13 14:39:49] -rw------- 1 boinc boinc    972497 Oct 13 14:35 agis_schedconf.cvmfs.json
[2025-10-13 14:39:49] -rw------- 1 boinc boinc   1560580 Oct 13 14:35 agis_ddmendpoints.agis.ALL.json
[2025-10-13 14:39:49] drwx------ 5 boinc boinc      4096 Oct 13 14:35 pilot3
[2025-10-13 14:39:49] -rw-r--r-- 1 boinc boinc       523 Oct 13 14:36 boinc_task_state.xml
[2025-10-13 14:39:49] -rw------- 1 boinc boinc       972 Oct 13 14:36 memory_monitor_summary.json
[2025-10-13 14:39:49] -rw------- 1 boinc boinc     34258 Oct 13 14:36 log.46676269._090661.job.log.tgz.1
[2025-10-13 14:39:49] -rw------- 1 boinc boinc        95 Oct 13 14:38 pilot_heartbeat.json
[2025-10-13 14:39:49] -rw------- 1 boinc boinc      8409 Oct 13 14:38 heartbeat.json
[2025-10-13 14:39:49] -rw-r--r-- 1 boinc boinc        23 Oct 13 14:39 wrapper_checkpoint.txt
[2025-10-13 14:39:49] -rw-r--r-- 1 boinc boinc      8192 Oct 13 14:39 boinc_mmap_file
[2025-10-13 14:39:49] -rw------- 1 boinc boinc      4752 Oct 13 14:39 pilotlog.txt
[2025-10-13 14:39:49] -rw------- 1 boinc boinc     86280 Oct 13 14:39 log.46676269._090661.job.log.1
[2025-10-13 14:39:49] -rw------- 1 boinc boinc       188 Oct 13 14:39 output.list
[2025-10-13 14:39:49] -rw-r--r-- 1 boinc boinc       620 Oct 13 14:39 runtime_log
[2025-10-13 14:39:49] -rw------- 1 boinc boinc    143360 Oct 13 14:39 result.tar.gz
[2025-10-13 14:39:49] -rw-r--r-- 1 boinc boinc      8629 Oct 13 14:39 runtime_log.err
[2025-10-13 14:39:49] -rw------- 1 boinc boinc       649 Oct 13 14:39 Vy1MDmWOJS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmK8UMDmcJ4hDm.diag
[2025-10-13 14:39:49] -rw-r--r-- 1 boinc boinc      6462 Oct 13 14:39 stderr.txt
[2025-10-13 14:39:49] No HITS result produced
[2025-10-13 14:39:49]  *** Contents of shared directory: ***
[2025-10-13 14:39:49] total 213588
[2025-10-13 14:39:49] -rw-r--r-- 2 boinc boinc 217973139 Oct 13 14:35 ATLAS.root_0
[2025-10-13 14:39:49] -rw-r--r-- 2 boinc boinc    569683 Oct 13 14:35 input.tar.gz
[2025-10-13 14:39:49] -rw-r--r-- 2 boinc boinc     15120 Oct 13 14:35 start_atlas.sh
[2025-10-13 14:39:49] -rw------- 1 boinc boinc    143360 Oct 13 14:39 result.tar.gz
14:39:50 (2423648): run_atlas exited; CPU time 33.662130
14:39:50 (2423648): called boinc_finish(0)

</stderr_txt>
]]>

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