Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:55:11 (2269882): wrapper (7.7.26015): starting
23:55:11 (2269882): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 23:55:11] Arguments: --nthreads 9
[2025-10-12 23:55:11] Threads: 9
[2025-10-12 23:55:11] Checking for CVMFS
[2025-10-12 23:55:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 23:55:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 23:55:11] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 23:55:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 23:55:12] 2.13.2.0 1602499 124735 162592 151647 3 486 24456569 40960000 26658 16776704 0 306777582 99.735 202968837 35267 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 23:55:12] CVMFS is ok
[2025-10-12 23:55:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 23:55:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 23:55:12] Further information can be found at the LHC@home message board.
[2025-10-12 23:55:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 23:55:12] Checking for apptainer binary...
[2025-10-12 23:55:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 23:55:12] Running /usr/bin/apptainer --version
[2025-10-12 23:55:12] apptainer version 1.4.3-1.el9
[2025-10-12 23:55:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 23:55:12] c-212-17.aglt2.org
[2025-10-12 23:55:12] apptainer works
[2025-10-12 23:55:12] Set ATHENA_PROC_NUMBER=9
[2025-10-12 23:55:12] Set ATHENA_CORE_NUMBER=9
[2025-10-12 23:55:12] Starting ATLAS job with PandaID=6840849946
[2025-10-12 23:55:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:50:14]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:50:14] 2025-10-13 09:49:14,954 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 05:50:14] 2025-10-13 09:49:14,954 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 05:50:14] 2025-10-13 09:49:14,954 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 05:50:14] 2025-10-13 09:49:14,962 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:50:14] 2025-10-13 09:49:14,963 | INFO     | sum of square deviations: 12956517629.319824
[2025-10-13 05:50:14] 2025-10-13 09:49:14,985 | INFO     | sum of deviations: 162876628080.05472
[2025-10-13 05:50:14] 2025-10-13 09:49:14,985 | INFO     | mean x: 1760338325.5994236
[2025-10-13 05:50:14] 2025-10-13 09:49:14,985 | INFO     | mean y: 2466327.273775216
[2025-10-13 05:50:14] 2025-10-13 09:49:14,986 | INFO     | -- intersect: -22126780045.601753
[2025-10-13 05:50:14] 2025-10-13 09:49:14,986 | INFO     | intersect: -22126780045.601753
[2025-10-13 05:50:14] 2025-10-13 09:49:14,986 | INFO     | chi2: 4.762450519097818
[2025-10-13 05:50:14] 2025-10-13 09:49:14,986 | INFO     | sum of square deviations: 12404498274.619818
[2025-10-13 05:50:14] 2025-10-13 09:49:14,989 | INFO     | sum of deviations: 207099719853.97073
[2025-10-13 05:50:14] 2025-10-13 09:49:14,989 | INFO     | mean x: 1760338173.0994153
[2025-10-13 05:50:14] 2025-10-13 09:49:14,989 | INFO     | mean y: 2478430.8538011694
[2025-10-13 05:50:14] 2025-10-13 09:49:14,989 | INFO     | -- intersect: -29387306986.187828
[2025-10-13 05:50:14] 2025-10-13 09:49:14,989 | INFO     | intersect: -29387306986.187828
[2025-10-13 05:50:14] 2025-10-13 09:49:14,990 | INFO     | chi2: 3.1658249367074838
[2025-10-13 05:50:14] 2025-10-13 09:49:14,990 | INFO     | current chi2=3.1658249367074838 (change=33.52529492931705 %)
[2025-10-13 05:50:14] 2025-10-13 09:49:14,990 | INFO     | sum of square deviations: 11868219168.320425
[2025-10-13 05:50:14] 2025-10-13 09:49:14,992 | INFO     | sum of deviations: 203334839739.0269
[2025-10-13 05:50:14] 2025-10-13 09:49:14,993 | INFO     | mean x: 1760338020.5756676
[2025-10-13 05:50:14] 2025-10-13 09:49:14,993 | INFO     | mean y: 2477359.881305638
[2025-10-13 05:50:14] 2025-10-13 09:49:14,993 | INFO     | -- intersect: -30156895687.062862
[2025-10-13 05:50:14] 2025-10-13 09:49:14,993 | INFO     | intersect: -30156895687.062862
[2025-10-13 05:50:14] 2025-10-13 09:49:14,993 | INFO     | chi2: 3.163311908009911
[2025-10-13 05:50:14] 2025-10-13 09:49:14,993 | INFO     | current chi2=3.163311908009911 (change=0.07937990090463896 %)
[2025-10-13 05:50:14] 2025-10-13 09:49:14,993 | INFO     | right removable region: 336
[2025-10-13 05:50:14] 2025-10-13 09:49:14,994 | INFO     | sum of square deviations: 12404434534.997091
[2025-10-13 05:50:14] 2025-10-13 09:49:14,996 | INFO     | sum of deviations: 70727899001.58182
[2025-10-13 05:50:14] 2025-10-13 09:49:14,996 | INFO     | mean x: 1760338478.1081872
[2025-10-13 05:50:14] 2025-10-13 09:49:14,996 | INFO     | mean y: 2491739.4707602337
[2025-10-13 05:50:14] 2025-10-13 09:49:14,996 | INFO     | -- intersect: -10034647941.259016
[2025-10-13 05:50:14] 2025-10-13 09:49:14,996 | INFO     | intersect: -10034647941.259016
[2025-10-13 05:50:14] 2025-10-13 09:49:14,997 | INFO     | chi2: 2.1500993662946133
[2025-10-13 05:50:14] 2025-10-13 09:49:14,997 | INFO     | current chi2=2.1500993662946133 (change=54.85308755077794 %)
[2025-10-13 05:50:14] 2025-10-13 09:49:14,997 | INFO     | sum of square deviations: 11868279699.851631
[2025-10-13 05:50:14] 2025-10-13 09:49:15,000 | INFO     | sum of deviations: 42373639925.602325
[2025-10-13 05:50:14] 2025-10-13 09:49:15,000 | INFO     | mean x: 1760338630.6142433
[2025-10-13 05:50:14] 2025-10-13 09:49:15,000 | INFO     | mean y: 2499776.1661721068
[2025-10-13 05:50:14] 2025-10-13 09:49:15,000 | INFO     | -- intersect: -6282484835.521765
[2025-10-13 05:50:14] 2025-10-13 09:49:15,000 | INFO     | intersect: -6282484835.521765
[2025-10-13 05:50:14] 2025-10-13 09:49:15,001 | INFO     | chi2: 1.8948957053851094
[2025-10-13 05:50:14] 2025-10-13 09:49:15,001 | INFO     | current chi2=1.8948957053851094 (change=11.869389150572637 %)
[2025-10-13 05:50:14] 2025-10-13 09:49:15,001 | INFO     | left removable region: 20
[2025-10-13 05:50:14] 2025-10-13 09:49:15,001 | INFO     | sum of square deviations: 9784821806.341772
[2025-10-13 05:50:14] 2025-10-13 09:49:15,003 | INFO     | sum of deviations: 48691851539.18354
[2025-10-13 05:50:14] 2025-10-13 09:49:15,003 | INFO     | mean x: 1760338600.107595
[2025-10-13 05:50:14] 2025-10-13 09:49:15,003 | INFO     | mean y: 2523530.9651898732
[2025-10-13 05:50:14] 2025-10-13 09:49:15,003 | INFO     | -- intersect: -8757385179.848516
[2025-10-13 05:50:14] 2025-10-13 09:49:15,003 | INFO     | intersect: -8757385179.848516
[2025-10-13 05:50:14] 2025-10-13 09:49:15,004 | INFO     | chi2: 0.09590584005620767
[2025-10-13 05:50:14] 2025-10-13 09:49:15,004 | INFO     | -- intersect: -8757385179.848516
[2025-10-13 05:50:14] 2025-10-13 09:49:15,004 | INFO     | current memory leak: 4.98 B/s (using 316 data points, chi2=0.10)
[2025-10-13 05:50:14] 2025-10-13 09:49:15,004 | INFO     | could have reported an average CPU frequency of 3130 MHz (15 samples)
[2025-10-13 05:50:14] 2025-10-13 09:49:15,005 | INFO     | ..............................
[2025-10-13 05:50:14] 2025-10-13 09:49:15,005 | INFO     | . Timing measurements:
[2025-10-13 05:50:14] 2025-10-13 09:49:15,005 | INFO     | . get job = 0 s
[2025-10-13 05:50:14] 2025-10-13 09:49:15,005 | INFO     | . initial setup = 2 s
[2025-10-13 05:50:14] 2025-10-13 09:49:15,005 | INFO     | . payload setup = 13 s
[2025-10-13 05:50:14] 2025-10-13 09:49:15,005 | INFO     | . stage-in = 0 s
[2025-10-13 05:50:14] 2025-10-13 09:49:15,005 | INFO     | . payload execution = 21171 s
[2025-10-13 05:50:14] 2025-10-13 09:49:15,005 | INFO     | . stage-out = 2 s
[2025-10-13 05:50:14] 2025-10-13 09:49:15,005 | INFO     | . log creation = 0 s
[2025-10-13 05:50:14] 2025-10-13 09:49:15,005 | INFO     | ..............................
[2025-10-13 05:50:14] 2025-10-13 09:49:15,082 | INFO     | 
[2025-10-13 05:50:14] 2025-10-13 09:49:15,083 | INFO     | job summary report
[2025-10-13 05:50:14] 2025-10-13 09:49:15,083 | INFO     | --------------------------------------------------
[2025-10-13 05:50:14] 2025-10-13 09:49:15,083 | INFO     | PanDA job id: 6840849946
[2025-10-13 05:50:14] 2025-10-13 09:49:15,083 | INFO     | task id: 46676269
[2025-10-13 05:50:14] 2025-10-13 09:49:15,083 | INFO     | errors: (none)
[2025-10-13 05:50:14] 2025-10-13 09:49:15,083 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:50:14] 2025-10-13 09:49:15,083 | INFO     | pilot state: finished 
[2025-10-13 05:50:14] 2025-10-13 09:49:15,083 | INFO     | transexitcode: 0
[2025-10-13 05:50:14] 2025-10-13 09:49:15,083 | INFO     | exeerrorcode: 0
[2025-10-13 05:50:14] 2025-10-13 09:49:15,084 | INFO     | exeerrordiag: 
[2025-10-13 05:50:14] 2025-10-13 09:49:15,084 | INFO     | exitcode: 0
[2025-10-13 05:50:14] 2025-10-13 09:49:15,084 | INFO     | exitmsg: OK
[2025-10-13 05:50:14] 2025-10-13 09:49:15,084 | INFO     | cpuconsumptiontime: 35386 s
[2025-10-13 05:50:14] 2025-10-13 09:49:15,084 | INFO     | nevents: 400
[2025-10-13 05:50:14] 2025-10-13 09:49:15,084 | INFO     | neventsw: 0
[2025-10-13 05:50:14] 2025-10-13 09:49:15,084 | INFO     | pid: 2280301
[2025-10-13 05:50:14] 2025-10-13 09:49:15,084 | INFO     | pgrp: 2280301
[2025-10-13 05:50:14] 2025-10-13 09:49:15,084 | INFO     | corecount: 9
[2025-10-13 05:50:14] 2025-10-13 09:49:15,084 | INFO     | event service: False
[2025-10-13 05:50:14] 2025-10-13 09:49:15,084 | INFO     | sizes: {0: 2348857, 1: 2348857, 10: 2349147, 12: 2349175, 21189: 2383023, 21192: 2392021, 21195: 2392205, 21203: 2392399}
[2025-10-13 05:50:14] 2025-10-13 09:49:15,084 | INFO     | --------------------------------------------------
[2025-10-13 05:50:14] 2025-10-13 09:49:15,084 | INFO     | 
[2025-10-13 05:50:14] 2025-10-13 09:49:15,084 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 05:50:14] 2025-10-13 09:49:15,106 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:50:14] 2025-10-13 09:49:15,106 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:50:14] 2025-10-13 09:49:15,107 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:50:14] 2025-10-13 09:49:15,107 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:50:14] 2025-10-13 09:49:15,107 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:50:14] 2025-10-13 09:49:15,107 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:50:14] 2025-10-13 09:49:15,107 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:50:14] 2025-10-13 09:49:15,107 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:50:14] 2025-10-13 09:49:15,107 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:50:14] 2025-10-13 09:49:15,107 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:50:14] 2025-10-13 09:49:15,107 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:50:14] 2025-10-13 09:49:15,107 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:50:14] 2025-10-13 09:49:15,107 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:50:14] 2025-10-13 09:49:15,107 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:50:14] 2025-10-13 09:49:15,107 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:50:14] 2025-10-13 09:49:15,107 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:50:14] 2025-10-13 09:49:15,107 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:50:14] 2025-10-13 09:49:15,107 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:50:14] 2025-10-13 09:49:15,107 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:50:14] 2025-10-13 09:49:15,108 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:50:14] 2025-10-13 09:49:15,108 | INFO     | job 6840849946 has completed (purged errors)
[2025-10-13 05:50:14] 2025-10-13 09:49:15,108 | INFO     | overall cleanup function is called
[2025-10-13 05:50:14] 2025-10-13 09:49:16,117 | INFO     | --- collectZombieJob: --- 10, [2280301]
[2025-10-13 05:50:14] 2025-10-13 09:49:16,117 | INFO     | zombie collector waiting for pid 2280301
[2025-10-13 05:50:14] 2025-10-13 09:49:16,117 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:50:14] 2025-10-13 09:49:16,117 | INFO     | collected zombie processes
[2025-10-13 05:50:14] 2025-10-13 09:49:16,122 | INFO     | will attempt to kill all subprocesses of pid=2280301
[2025-10-13 05:50:14] 2025-10-13 09:49:16,581 | INFO     | process IDs to be killed: [2280301] (in reverse order)
[2025-10-13 05:50:14] 2025-10-13 09:49:16,706 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:50:14] 2025-10-13 09:49:16,707 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:50:14] 2025-10-13 09:49:16,754 | INFO     | did not find any defunct processes belonging to 2280301
[2025-10-13 05:50:14] 2025-10-13 09:49:16,771 | INFO     | did not find any defunct processes belonging to 2280301
[2025-10-13 05:50:14] 2025-10-13 09:49:16,771 | INFO     | ready for new job
[2025-10-13 05:50:14] 2025-10-13 09:49:16,771 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:50:14] 2025-10-13 09:49:16,774 | INFO     | ***************************************
[2025-10-13 05:50:14] 2025-10-13 09:49:16,774 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:50:14] 2025-10-13 09:49:16,774 | INFO     | ***************************************
[2025-10-13 05:50:14] 2025-10-13 09:49:16,774 | INFO     | 
[2025-10-13 05:50:14] 2025-10-13 09:49:16,781 | INFO     | architecture information:
[2025-10-13 05:50:14] 2025-10-13 09:49:16,781 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:50:14] 2025-10-13 09:49:16,801 | INFO     | cat /etc/os-release:
[2025-10-13 05:50:14] NAME="CentOS Linux"
[2025-10-13 05:50:14] VERSION="7 (Core)"
[2025-10-13 05:50:14] ID="centos"
[2025-10-13 05:50:14] ID_LIKE="rhel fedora"
[2025-10-13 05:50:14] VERSION_ID="7"
[2025-10-13 05:50:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:50:14] ANSI_COLOR="0;31"
[2025-10-13 05:50:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:50:14] HOME_URL="https://www.centos.org/"
[2025-10-13 05:50:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:50:14] 
[2025-10-13 05:50:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:50:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:50:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:50:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:50:14] 
[2025-10-13 05:50:14] 2025-10-13 09:49:16,802 | INFO     | ***************************************
[2025-10-13 05:50:14] 2025-10-13 09:49:17,305 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 05:50:14] 2025-10-13 09:49:17,324 | INFO     | sufficient remaining disk space (127788908544 B)
[2025-10-13 05:50:14] 2025-10-13 09:49:17,324 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:50:14] 2025-10-13 09:49:17,324 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:50:14] 2025-10-13 09:49:17,324 | INFO     | update_server=False
[2025-10-13 05:50:14] 2025-10-13 09:49:17,324 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:50:14] 2025-10-13 09:49:17,324 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:50:14] 2025-10-13 09:49:17,324 | INFO     | aborting loop
[2025-10-13 05:50:14] 2025-10-13 09:49:17,324 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:50:14] 2025-10-13 09:49:17,861 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:50:14] 2025-10-13 09:49:17,937 | INFO     | all data control threads have been joined
[2025-10-13 05:50:14] 2025-10-13 09:49:18,300 | INFO     | all payload control threads have been joined
[2025-10-13 05:50:14] 2025-10-13 09:49:18,302 | INFO     | all job control threads have been joined
[2025-10-13 05:50:14] 2025-10-13 09:49:18,330 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:50:14] 2025-10-13 09:49:18,330 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:50:14] 2025-10-13 09:49:18,373 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:50:14] 2025-10-13 09:49:18,524 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:50:14] 2025-10-13 09:49:18,773 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:50:14] 2025-10-13 09:49:18,941 | INFO     | [data] control thread has finished
[2025-10-13 05:50:14] 2025-10-13 09:49:18,941 | INFO     | [job] validate thread has finished
[2025-10-13 05:50:14] 2025-10-13 09:49:19,048 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:50:14] 2025-10-13 09:49:19,310 | INFO     | [job] control thread has finished
[2025-10-13 05:50:14] 2025-10-13 09:49:19,331 | INFO     | [payload] control thread has finished
[2025-10-13 05:50:14] 2025-10-13 09:49:19,332 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:50:14] 2025-10-13 09:49:19,507 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:50:14] 2025-10-13 09:49:19,742 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:50:14] 2025-10-13 09:49:19,789 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:50:14] 2025-10-13 09:49:20,096 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:50:14] 2025-10-13 09:49:21,102 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:50:14] 2025-10-13 09:49:21,874 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:50:14] 2025-10-13 09:49:48,473 | INFO     | PID=2273557 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 05:50:14] 2025-10-13 09:49:48,473 | INFO     | .. there are 23 such processes running
[2025-10-13 05:50:14] 2025-10-13 09:49:48,474 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:50:14] 2025-10-13 09:49:48,475 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:50:14] 2025-10-13 09:49:48,475 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:50:14] 2025-10-13 09:50:08,311 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:50:14] 2025-10-13 09:50:08,615 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140672582428480)>', '<ExcThread(monitor, started 140672233359104)>']
[2025-10-13 05:50:14] 2025-10-13 09:50:09,598 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:50:14] 2025-10-13 09:50:09,598 | INFO     | [monitor] control thread has ended
[2025-10-13 05:50:14] 2025-10-13 09:50:13,640 | INFO     | all workflow threads have been joined
[2025-10-13 05:50:14] 2025-10-13 09:50:13,643 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:50:14] 2025-10-13 09:50:13,643 | INFO     | traces error code: 0
[2025-10-13 05:50:14] 2025-10-13 09:50:13,644 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:50:14] 2025-10-13 09:50:13,818 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:50:14] 2025-10-13 09:50:13,821 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:50:14] 2025-10-13 09:50:13,824 [wrapper] pilotpid: 2273557
[2025-10-13 05:50:14] 2025-10-13 09:50:13,826 [wrapper] Pilot exit status: 0
[2025-10-13 05:50:14] 2025-10-13 09:50:13,837 [wrapper] pandaids: 6840849946
[2025-10-13 05:50:14] 2025-10-13 09:50:13,933 [wrapper] cleanup supervisor_pilot 3356150 2273558
[2025-10-13 05:50:14] 2025-10-13 09:50:13,946 [wrapper] Test setup, not cleaning
[2025-10-13 05:50:14] 2025-10-13 09:50:13,952 [wrapper] apfmon messages muted
[2025-10-13 05:50:14] 2025-10-13 09:50:13,955 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:50:14] 2025-10-13 09:50:13,958 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:50:14]  *** Error codes and diagnostics ***
[2025-10-13 05:50:14]     "exeErrorCode": 0,
[2025-10-13 05:50:14]     "exeErrorDiag": "",
[2025-10-13 05:50:14]     "pilotErrorCode": 0,
[2025-10-13 05:50:14]     "pilotErrorDiag": "",
[2025-10-13 05:50:14]  *** Listing of results directory ***
[2025-10-13 05:50:14] total 412608
[2025-10-13 05:50:14] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 17:57 pilot3.tar.gz
[2025-10-13 05:50:14] -rwx------. 1 boincer umatlas     36292 Oct 12 18:03 runpilot2-wrapper.sh
[2025-10-13 05:50:14] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 18:03 queuedata.json
[2025-10-13 05:50:14] -rw-r--r--. 1 boincer umatlas       100 Oct 12 23:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:50:14] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 23:55 run_atlas
[2025-10-13 05:50:14] -rw-r--r--. 1 boincer umatlas       105 Oct 12 23:55 job.xml
[2025-10-13 05:50:14] -rw-r--r--. 2 boincer umatlas 219265329 Oct 12 23:55 EVNT.46676267._004053.pool.root.1
[2025-10-13 05:50:14] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 23:55 start_atlas.sh
[2025-10-13 05:50:14] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 23:55 shared
[2025-10-13 05:50:14] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 23:55 input.tar.gz
[2025-10-13 05:50:14] -rw-r--r--. 1 boincer umatlas         0 Oct 12 23:55 boinc_lockfile
[2025-10-13 05:50:14] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 23:55 pandaJob.out
[2025-10-13 05:50:14] -rw-------. 1 boincer umatlas    974373 Oct 12 23:55 agis_schedconf.cvmfs.json
[2025-10-13 05:50:14] drwx------. 5 boincer umatlas      4096 Oct 12 23:55 pilot3
[2025-10-13 05:50:14] -rw-------. 1 boincer umatlas 192767923 Oct 13 05:46 HITS.46676269._090538.pool.root.1
[2025-10-13 05:50:14] -rw-r--r--. 1 boincer umatlas       531 Oct 13 05:46 boinc_task_state.xml
[2025-10-13 05:50:14] -rw-r--r--. 1 boincer umatlas      6948 Oct 13 05:48 init_data.xml
[2025-10-13 05:50:14] -rw-------. 1 boincer umatlas      1049 Oct 13 05:48 memory_monitor_summary.json
[2025-10-13 05:50:14] -rw-------. 1 boincer umatlas   1560580 Oct 13 05:49 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:50:14] -rw-------. 1 boincer umatlas    562851 Oct 13 05:49 log.46676269._090538.job.log.tgz.1
[2025-10-13 05:50:14] -rw-------. 1 boincer umatlas      7804 Oct 13 05:49 heartbeat.json
[2025-10-13 05:50:14] -rw-------. 1 boincer umatlas        95 Oct 13 05:49 pilot_heartbeat.json
[2025-10-13 05:50:14] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 05:50 boinc_mmap_file
[2025-10-13 05:50:14] -rw-r--r--. 1 boincer umatlas        28 Oct 13 05:50 wrapper_checkpoint.txt
[2025-10-13 05:50:14] -rw-------. 1 boincer umatlas      4825 Oct 13 05:50 pilotlog.txt
[2025-10-13 05:50:14] -rw-------. 1 boincer umatlas   2723569 Oct 13 05:50 log.46676269._090538.job.log.1
[2025-10-13 05:50:14] -rw-------. 1 boincer umatlas       357 Oct 13 05:50 output.list
[2025-10-13 05:50:14] -rw-r--r--. 1 boincer umatlas       620 Oct 13 05:50 runtime_log
[2025-10-13 05:50:14] -rw-------. 1 boincer umatlas   3307520 Oct 13 05:50 result.tar.gz
[2025-10-13 05:50:14] -rw-r--r--. 1 boincer umatlas      8704 Oct 13 05:50 runtime_log.err
[2025-10-13 05:50:14] -rw-------. 1 boincer umatlas       662 Oct 13 05:50 n7QKDmYLJS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmP7UMDmIt5SZn.diag
[2025-10-13 05:50:14] -rw-r--r--. 1 boincer umatlas     21002 Oct 13 05:50 stderr.txt
[2025-10-13 05:50:14] HITS file was successfully produced:
[2025-10-13 05:50:14] -rw-------. 1 boincer umatlas 192767923 Oct 13 05:46 shared/HITS.pool.root.1
[2025-10-13 05:50:14]  *** Contents of shared directory: ***
[2025-10-13 05:50:14] total 406196
[2025-10-13 05:50:14] -rw-r--r--. 2 boincer umatlas 219265329 Oct 12 23:55 ATLAS.root_0
[2025-10-13 05:50:14] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 23:55 start_atlas.sh
[2025-10-13 05:50:14] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 23:55 input.tar.gz
[2025-10-13 05:50:14] -rw-------. 1 boincer umatlas 192767923 Oct 13 05:46 HITS.pool.root.1
[2025-10-13 05:50:14] -rw-------. 1 boincer umatlas   3307520 Oct 13 05:50 result.tar.gz
05:50:15 (2269882): run_atlas exited; CPU time 35934.039267
05:50:15 (2269882): called boinc_finish(0)

</stderr_txt>
]]>

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