Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:33:49 (27287): wrapper (7.7.26015): starting
22:33:49 (27287): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 22:33:49] Arguments: --nthreads 8
[2025-10-12 22:33:49] Threads: 8
[2025-10-12 22:33:49] Checking for CVMFS
[2025-10-12 22:33:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 22:33:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 22:33:49] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 22:33:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 22:33:49] 2.11.2.0 25047 53595 113916 151645 2 59 15635355 20275201 917 130560 0 64526044 99.980 2420212 24077 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 22:33:49] CVMFS is ok
[2025-10-12 22:33:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 22:33:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 22:33:49] Further information can be found at the LHC@home message board.
[2025-10-12 22:33:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 22:33:49] Checking for apptainer binary...
[2025-10-12 22:33:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 22:33:49] Running /usr/bin/apptainer --version
[2025-10-12 22:33:50] apptainer version 1.3.2-1.el7
[2025-10-12 22:33:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 22:33:50] c-205-37.aglt2.org
[2025-10-12 22:33:50] apptainer works
[2025-10-12 22:33:50] Set ATHENA_PROC_NUMBER=8
[2025-10-12 22:33:50] Set ATHENA_CORE_NUMBER=8
[2025-10-12 22:33:50] Starting ATLAS job with PandaID=6840713351
[2025-10-12 22:33:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:39:13]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:39:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ca/d4/log.46676269._087673.job.log.tgz.1
[2025-10-12 23:39:13]  workdir=None
[2025-10-12 23:39:13] ]
[2025-10-12 23:39:13] 2025-10-13 03:38:20,330 | INFO     | transferring file log.46676269._087673.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6840713351/log.46676269._087673.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 23:39:13] 2025-10-13 03:38:20,330 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6840713351/log.46676269._087673.job.log.tgz.1 /tmp/boinchome/slots/1/log.46676269._087673.job
[2025-10-12 23:39:13] 2025-10-13 03:38:20,352 | INFO     | adding to output.list: log.46676269._087673.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ca/d4/log.46676269._087673.job.log.tg
[2025-10-12 23:39:13] 2025-10-13 03:38:20,353 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 23:39:13] 2025-10-13 03:38:20,353 | INFO     | summary of transferred files:
[2025-10-12 23:39:13] 2025-10-13 03:38:20,353 | INFO     |  -- lfn=log.46676269._087673.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 23:39:13] 2025-10-13 03:38:20,353 | INFO     | stage-out finished correctly
[2025-10-12 23:39:13] 2025-10-13 03:38:20,646 | INFO     | PID=30982 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 23:39:13] 2025-10-13 03:38:20,646 | INFO     | .. there are 2 such processes running
[2025-10-12 23:39:13] 2025-10-13 03:38:21,647 | INFO     | time since job start (3859s) is within the limit (172800.0s)
[2025-10-12 23:39:13] 2025-10-13 03:38:23,301 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 23:39:13] 2025-10-13 03:38:23,471 | WARNING  | process 7118 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 23:39:13] 2025-10-13 03:38:23,472 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6840713351/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 23:39:13] 2025-10-13 03:38:23,562 | INFO     | number of running child processes to parent process 7118: 1
[2025-10-12 23:39:13] 2025-10-13 03:38:23,562 | INFO     | maximum number of monitored processes: 6
[2025-10-12 23:39:13] 2025-10-13 03:38:23,653 | INFO     | time since job start (3861s) is within the limit (172800.0s)
[2025-10-12 23:39:13] 2025-10-13 03:38:25,657 | INFO     | time since job start (3863s) is within the limit (172800.0s)
[2025-10-12 23:39:13] 2025-10-13 03:38:26,065 | INFO     | monitor loop #286: job 0:6840713351 is in state 'finished'
[2025-10-12 23:39:13] 2025-10-13 03:38:26,065 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:39:13] 2025-10-13 03:38:26,291 | INFO     | job 6840713351 has state=finished
[2025-10-12 23:39:13] 2025-10-13 03:38:26,292 | INFO     | preparing for final server update for job 6840713351 in state='finished'
[2025-10-12 23:39:13] 2025-10-13 03:38:26,292 | INFO     | this job has now completed (state=finished)
[2025-10-12 23:39:13] 2025-10-13 03:38:26,293 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 23:39:13] 2025-10-13 03:38:26,293 | INFO     | log transfer has been attempted: DONE
[2025-10-12 23:39:13] 2025-10-13 03:38:26,293 | INFO     | job 6840713351 has finished - writing final server update
[2025-10-12 23:39:13] 2025-10-13 03:38:26,293 | INFO     | total number of processed events: 400 (read)
[2025-10-12 23:39:13] 2025-10-13 03:38:26,294 | INFO     | executing command: lscpu
[2025-10-12 23:39:13] 2025-10-13 03:38:26,328 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 23:39:13] 2025-10-13 03:38:27,662 | INFO     | time since job start (3865s) is within the limit (172800.0s)
[2025-10-12 23:39:13] 2025-10-13 03:38:28,568 | INFO     | monitor loop #287: job 0:6840713351 is in state 'finished'
[2025-10-12 23:39:13] 2025-10-13 03:38:28,569 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:39:13] 2025-10-13 03:38:29,668 | INFO     | time since job start (3867s) is within the limit (172800.0s)
[2025-10-12 23:39:13] 2025-10-13 03:38:30,361 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 23:39:13] 2025-10-13 03:38:30,364 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 2063.5066875
[2025-10-12 23:39:13] 2025-10-13 03:38:30,366 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6840713351/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 23:39:13] 2025-10-13 03:38:30,366 | INFO     | extracted standard info from prmon json
[2025-10-12 23:39:13] 2025-10-13 03:38:30,366 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 23:39:13] 2025-10-13 03:38:30,366 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 23:39:13] 2025-10-13 03:38:30,367 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 23:39:13] 2025-10-13 03:38:30,367 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:39:13] 2025-10-13 03:38:30,368 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:39:13] 2025-10-13 03:38:30,368 | INFO     | sum of square deviations: 54438230.0
[2025-10-12 23:39:13] 2025-10-13 03:38:30,368 | INFO     | sum of deviations: -5966410762.5
[2025-10-12 23:39:13] 2025-10-13 03:38:30,368 | INFO     | mean x: 1760324849.5
[2025-10-12 23:39:13] 2025-10-13 03:38:30,368 | INFO     | mean y: 2685771.625
[2025-10-12 23:39:13] 2025-10-13 03:38:30,368 | INFO     | -- intersect: 192933666950.71536
[2025-10-12 23:39:13] 2025-10-13 03:38:30,368 | INFO     | intersect: 192933666950.71536
[2025-10-12 23:39:13] 2025-10-13 03:38:30,368 | INFO     | chi2: 0.042967153191030706
[2025-10-12 23:39:13] 2025-10-13 03:38:30,368 | INFO     | -- intersect: 192933666950.71536
[2025-10-12 23:39:13] 2025-10-13 03:38:30,368 | INFO     | current memory leak: -109.60 B/s (using 56 data points, chi2=0.04)
[2025-10-12 23:39:13] 2025-10-13 03:38:30,369 | INFO     | could have reported an average CPU frequency of 2237 MHz (6 samples)
[2025-10-12 23:39:13] 2025-10-13 03:38:30,369 | INFO     | ..............................
[2025-10-12 23:39:13] 2025-10-13 03:38:30,369 | INFO     | . Timing measurements:
[2025-10-12 23:39:13] 2025-10-13 03:38:30,369 | INFO     | . get job = 0 s
[2025-10-12 23:39:13] 2025-10-13 03:38:30,369 | INFO     | . initial setup = 2 s
[2025-10-12 23:39:13] 2025-10-13 03:38:30,369 | INFO     | . payload setup = 5 s
[2025-10-12 23:39:13] 2025-10-13 03:38:30,369 | INFO     | . stage-in = 0 s
[2025-10-12 23:39:13] 2025-10-13 03:38:30,369 | INFO     | . payload execution = 3831 s
[2025-10-12 23:39:13] 2025-10-13 03:38:30,369 | INFO     | . stage-out = 0 s
[2025-10-12 23:39:13] 2025-10-13 03:38:30,369 | INFO     | . log creation = 0 s
[2025-10-12 23:39:13] 2025-10-13 03:38:30,369 | INFO     | ..............................
[2025-10-12 23:39:13] 2025-10-13 03:38:30,418 | INFO     | 
[2025-10-12 23:39:13] 2025-10-13 03:38:30,418 | INFO     | job summary report
[2025-10-12 23:39:13] 2025-10-13 03:38:30,418 | INFO     | --------------------------------------------------
[2025-10-12 23:39:13] 2025-10-13 03:38:30,419 | INFO     | PanDA job id: 6840713351
[2025-10-12 23:39:13] 2025-10-13 03:38:30,419 | INFO     | task id: 46676269
[2025-10-12 23:39:13] 2025-10-13 03:38:30,419 | INFO     | errors: (none)
[2025-10-12 23:39:13] 2025-10-13 03:38:30,419 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:39:13] 2025-10-13 03:38:30,419 | INFO     | pilot state: finished 
[2025-10-12 23:39:13] 2025-10-13 03:38:30,419 | INFO     | transexitcode: 0
[2025-10-12 23:39:13] 2025-10-13 03:38:30,419 | INFO     | exeerrorcode: 0
[2025-10-12 23:39:13] 2025-10-13 03:38:30,419 | INFO     | exeerrordiag: 
[2025-10-12 23:39:13] 2025-10-13 03:38:30,420 | INFO     | exitcode: 0
[2025-10-12 23:39:13] 2025-10-13 03:38:30,420 | INFO     | exitmsg: OK
[2025-10-12 23:39:13] 2025-10-13 03:38:30,420 | INFO     | cpuconsumptiontime: 28412 s
[2025-10-12 23:39:13] 2025-10-13 03:38:30,420 | INFO     | nevents: 400
[2025-10-12 23:39:13] 2025-10-13 03:38:30,420 | INFO     | neventsw: 0
[2025-10-12 23:39:13] 2025-10-13 03:38:30,420 | INFO     | pid: 7118
[2025-10-12 23:39:13] 2025-10-13 03:38:30,420 | INFO     | pgrp: 7118
[2025-10-12 23:39:13] 2025-10-13 03:38:30,420 | INFO     | corecount: 8
[2025-10-12 23:39:13] 2025-10-13 03:38:30,420 | INFO     | event service: False
[2025-10-12 23:39:13] 2025-10-13 03:38:30,421 | INFO     | sizes: {0: 2348857, 4: 2349119, 11: 2349147, 3841: 2375040, 3842: 2384038, 3845: 2384094, 3852: 2384416}
[2025-10-12 23:39:13] 2025-10-13 03:38:30,421 | INFO     | --------------------------------------------------
[2025-10-12 23:39:13] 2025-10-13 03:38:30,421 | INFO     | 
[2025-10-12 23:39:13] 2025-10-13 03:38:30,421 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 23:39:13] 2025-10-13 03:38:30,442 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:39:13] 2025-10-13 03:38:30,443 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:39:13] 2025-10-13 03:38:30,443 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:39:13] 2025-10-13 03:38:30,443 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:39:13] 2025-10-13 03:38:30,443 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:39:13] 2025-10-13 03:38:30,443 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:39:13] 2025-10-13 03:38:30,443 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:39:13] 2025-10-13 03:38:30,444 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:39:13] 2025-10-13 03:38:30,444 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:39:13] 2025-10-13 03:38:30,444 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:39:13] 2025-10-13 03:38:30,444 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:39:13] 2025-10-13 03:38:30,444 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:39:13] 2025-10-13 03:38:30,444 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:39:13] 2025-10-13 03:38:30,444 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:39:13] 2025-10-13 03:38:30,444 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:39:13] 2025-10-13 03:38:30,445 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:39:13] 2025-10-13 03:38:30,445 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:39:13] 2025-10-13 03:38:30,445 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:39:13] 2025-10-13 03:38:30,445 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:39:13] 2025-10-13 03:38:30,445 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:39:13] 2025-10-13 03:38:30,445 | INFO     | job 6840713351 has completed (purged errors)
[2025-10-12 23:39:13] 2025-10-13 03:38:30,446 | INFO     | overall cleanup function is called
[2025-10-12 23:39:13] 2025-10-13 03:38:31,454 | INFO     | --- collectZombieJob: --- 10, [7118]
[2025-10-12 23:39:13] 2025-10-13 03:38:31,454 | INFO     | zombie collector waiting for pid 7118
[2025-10-12 23:39:13] 2025-10-13 03:38:31,454 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:39:13] 2025-10-13 03:38:31,454 | INFO     | collected zombie processes
[2025-10-12 23:39:13] 2025-10-13 03:38:31,454 | INFO     | will attempt to kill all subprocesses of pid=7118
[2025-10-12 23:39:13] 2025-10-13 03:38:31,573 | INFO     | process IDs to be killed: [7118] (in reverse order)
[2025-10-12 23:39:13] 2025-10-13 03:38:31,630 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:39:13] 2025-10-13 03:38:31,630 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:39:13] 2025-10-13 03:38:31,635 | INFO     | did not find any defunct processes belonging to 7118
[2025-10-12 23:39:13] 2025-10-13 03:38:31,639 | INFO     | did not find any defunct processes belonging to 7118
[2025-10-12 23:39:13] 2025-10-13 03:38:31,639 | INFO     | ready for new job
[2025-10-12 23:39:13] 2025-10-13 03:38:31,639 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:39:13] 2025-10-13 03:38:31,641 | INFO     | ***************************************
[2025-10-12 23:39:13] 2025-10-13 03:38:31,641 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:39:13] 2025-10-13 03:38:31,641 | INFO     | ***************************************
[2025-10-12 23:39:13] 2025-10-13 03:38:31,642 | INFO     | 
[2025-10-12 23:39:13] 2025-10-13 03:38:31,643 | INFO     | architecture information:
[2025-10-12 23:39:13] 2025-10-13 03:38:31,643 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:39:13] 2025-10-13 03:38:31,659 | INFO     | cat /etc/os-release:
[2025-10-12 23:39:13] NAME="CentOS Linux"
[2025-10-12 23:39:13] VERSION="7 (Core)"
[2025-10-12 23:39:13] ID="centos"
[2025-10-12 23:39:13] ID_LIKE="rhel fedora"
[2025-10-12 23:39:13] VERSION_ID="7"
[2025-10-12 23:39:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:39:13] ANSI_COLOR="0;31"
[2025-10-12 23:39:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:39:13] HOME_URL="https://www.centos.org/"
[2025-10-12 23:39:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:39:13] 
[2025-10-12 23:39:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:39:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:39:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:39:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:39:13] 
[2025-10-12 23:39:13] 2025-10-13 03:38:31,659 | INFO     | ***************************************
[2025-10-12 23:39:13] 2025-10-13 03:38:32,162 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 23:39:13] 2025-10-13 03:38:32,181 | INFO     | sufficient remaining disk space (32896974848 B)
[2025-10-12 23:39:13] 2025-10-13 03:38:32,182 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:39:13] 2025-10-13 03:38:32,182 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:39:13] 2025-10-13 03:38:32,182 | INFO     | update_server=False
[2025-10-12 23:39:13] 2025-10-13 03:38:32,182 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:39:13] 2025-10-13 03:38:32,183 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:39:13] 2025-10-13 03:38:32,183 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:39:13] 2025-10-13 03:38:32,183 | INFO     | aborting loop
[2025-10-12 23:39:13] 2025-10-13 03:38:32,929 | INFO     | all data control threads have been joined
[2025-10-12 23:39:13] 2025-10-13 03:38:33,183 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:39:13] 2025-10-13 03:38:33,188 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:39:13] 2025-10-13 03:38:33,189 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:39:13] 2025-10-13 03:38:33,220 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:39:13] 2025-10-13 03:38:33,223 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:39:13] 2025-10-13 03:38:33,262 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:39:13] 2025-10-13 03:38:33,372 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:39:13] 2025-10-13 03:38:33,424 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:39:13] 2025-10-13 03:38:33,446 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:39:13] 2025-10-13 03:38:33,646 | INFO     | all payload control threads have been joined
[2025-10-12 23:39:13] 2025-10-13 03:38:33,799 | INFO     | all job control threads have been joined
[2025-10-12 23:39:13] 2025-10-13 03:38:33,900 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:39:13] 2025-10-13 03:38:33,935 | INFO     | [data] control thread has finished
[2025-10-12 23:39:13] 2025-10-13 03:38:34,252 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:39:13] 2025-10-13 03:38:34,544 | INFO     | [job] validate thread has finished
[2025-10-12 23:39:13] 2025-10-13 03:38:34,647 | INFO     | [payload] control thread has finished
[2025-10-12 23:39:13] 2025-10-13 03:38:34,799 | INFO     | [job] control thread has finished
[2025-10-12 23:39:13] 2025-10-13 03:38:35,429 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:39:13] 2025-10-13 03:38:37,906 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:39:13] 2025-10-13 03:38:42,883 | INFO     | job.realtimelogging is not enabled
[2025-10-12 23:39:13] 2025-10-13 03:38:43,888 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:39:13] 2025-10-13 03:39:02,904 | INFO     | PID=30982 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 23:39:13] 2025-10-13 03:39:02,904 | INFO     | .. there are 2 such processes running
[2025-10-12 23:39:13] 2025-10-13 03:39:02,905 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:39:13] 2025-10-13 03:39:02,905 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:39:13] 2025-10-13 03:39:02,905 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:39:13] 2025-10-13 03:39:08,318 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:39:13] 2025-10-13 03:39:08,426 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140064814180160)>', '<ExcThread(monitor, started 140064235443968)>']
[2025-10-12 23:39:13] 2025-10-13 03:39:08,930 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:39:13] 2025-10-13 03:39:08,930 | INFO     | [monitor] control thread has ended
[2025-10-12 23:39:13] 2025-10-13 03:39:13,451 | INFO     | all workflow threads have been joined
[2025-10-12 23:39:13] 2025-10-13 03:39:13,452 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:39:13] 2025-10-13 03:39:13,452 | INFO     | traces error code: 0
[2025-10-12 23:39:13] 2025-10-13 03:39:13,453 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:39:13] 2025-10-13 03:39:13,563 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:39:13] 2025-10-13 03:39:13,566 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:39:13] 2025-10-13 03:39:13,570 [wrapper] pilotpid: 30982
[2025-10-12 23:39:13] 2025-10-13 03:39:13,573 [wrapper] Pilot exit status: 0
[2025-10-12 23:39:13] 2025-10-13 03:39:13,583 [wrapper] pandaids: 6840713351
[2025-10-12 23:39:13] 2025-10-13 03:39:13,623 [wrapper] cleanup supervisor_pilot 23131 30983
[2025-10-12 23:39:13] 2025-10-13 03:39:13,627 [wrapper] Test setup, not cleaning
[2025-10-12 23:39:13] 2025-10-13 03:39:13,630 [wrapper] apfmon messages muted
[2025-10-12 23:39:13] 2025-10-13 03:39:13,634 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:39:13] 2025-10-13 03:39:13,637 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:39:13]  *** Error codes and diagnostics ***
[2025-10-12 23:39:13]     "exeErrorCode": 0,
[2025-10-12 23:39:13]     "exeErrorDiag": "",
[2025-10-12 23:39:13]     "pilotErrorCode": 0,
[2025-10-12 23:39:13]     "pilotErrorDiag": "",
[2025-10-12 23:39:13]  *** Listing of results directory ***
[2025-10-12 23:39:13] total 404472
[2025-10-12 23:39:13] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 15:28 pilot3.tar.gz
[2025-10-12 23:39:13] -rwx------ 1 boincer umatlas     36292 Oct 12 15:39 runpilot2-wrapper.sh
[2025-10-12 23:39:13] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 15:39 queuedata.json
[2025-10-12 23:39:13] -rw-r--r-- 1 boincer umatlas       100 Oct 12 22:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:39:13] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 22:33 run_atlas
[2025-10-12 23:39:13] -rw-r--r-- 1 boincer umatlas       105 Oct 12 22:33 job.xml
[2025-10-12 23:39:13] -rw-r--r-- 2 boincer umatlas 218846077 Oct 12 22:33 EVNT.46676267._004461.pool.root.1
[2025-10-12 23:39:13] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 22:33 start_atlas.sh
[2025-10-12 23:39:13] drwxrwx--x 2 boincer umatlas      4096 Oct 12 22:33 shared
[2025-10-12 23:39:13] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 22:33 input.tar.gz
[2025-10-12 23:39:13] -rw-r--r-- 1 boincer umatlas         0 Oct 12 22:33 boinc_lockfile
[2025-10-12 23:39:13] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 22:33 pandaJob.out
[2025-10-12 23:39:13] -rw------- 1 boincer umatlas    974373 Oct 12 22:34 agis_schedconf.cvmfs.json
[2025-10-12 23:39:13] -rw------- 1 boincer umatlas   1560580 Oct 12 22:34 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:39:13] drwx------ 5 boincer umatlas      4096 Oct 12 22:34 pilot3
[2025-10-12 23:39:13] -rw-r--r-- 1 boincer umatlas      6135 Oct 12 23:37 init_data.xml
[2025-10-12 23:39:13] -rw------- 1 boincer umatlas 189629933 Oct 12 23:37 HITS.46676269._087673.pool.root.1
[2025-10-12 23:39:13] -rw-r--r-- 1 boincer umatlas       530 Oct 12 23:38 boinc_task_state.xml
[2025-10-12 23:39:13] -rw------- 1 boincer umatlas      1047 Oct 12 23:38 memory_monitor_summary.json
[2025-10-12 23:39:13] -rw------- 1 boincer umatlas    320754 Oct 12 23:38 log.46676269._087673.job.log.tgz.1
[2025-10-12 23:39:13] -rw------- 1 boincer umatlas      7841 Oct 12 23:38 heartbeat.json
[2025-10-12 23:39:13] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 23:38 boinc_mmap_file
[2025-10-12 23:39:13] -rw-r--r-- 1 boincer umatlas        27 Oct 12 23:38 wrapper_checkpoint.txt
[2025-10-12 23:39:13] -rw------- 1 boincer umatlas        95 Oct 12 23:39 pilot_heartbeat.json
[2025-10-12 23:39:13] -rw------- 1 boincer umatlas      4893 Oct 12 23:39 pilotlog.txt
[2025-10-12 23:39:13] -rw------- 1 boincer umatlas    579429 Oct 12 23:39 log.46676269._087673.job.log.1
[2025-10-12 23:39:13] -rw------- 1 boincer umatlas       357 Oct 12 23:39 output.list
[2025-10-12 23:39:13] -rw-r--r-- 1 boincer umatlas       620 Oct 12 23:39 runtime_log
[2025-10-12 23:39:13] -rw------- 1 boincer umatlas    921600 Oct 12 23:39 result.tar.gz
[2025-10-12 23:39:13] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 23:39 runtime_log.err
[2025-10-12 23:39:13] -rw------- 1 boincer umatlas       657 Oct 12 23:39 dmCODmG6GS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkIlNDmzmwZxn.diag
[2025-10-12 23:39:13] -rw-r--r-- 1 boincer umatlas     22289 Oct 12 23:39 stderr.txt
[2025-10-12 23:39:13] HITS file was successfully produced:
[2025-10-12 23:39:13] -rw------- 1 boincer umatlas 189629933 Oct 12 23:37 shared/HITS.pool.root.1
[2025-10-12 23:39:13]  *** Contents of shared directory: ***
[2025-10-12 23:39:13] total 400388
[2025-10-12 23:39:13] -rw-r--r-- 2 boincer umatlas 218846077 Oct 12 22:33 ATLAS.root_0
[2025-10-12 23:39:13] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 22:33 start_atlas.sh
[2025-10-12 23:39:13] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 22:33 input.tar.gz
[2025-10-12 23:39:13] -rw------- 1 boincer umatlas 189629933 Oct 12 23:37 HITS.pool.root.1
[2025-10-12 23:39:13] -rw------- 1 boincer umatlas    921600 Oct 12 23:39 result.tar.gz
23:39:15 (27287): run_atlas exited; CPU time 28408.393468
23:39:15 (27287): called boinc_finish(0)

</stderr_txt>
]]>

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