Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:39:06 (16922): wrapper (7.7.26015): starting
22:39:06 (16922): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 22:39:06] Arguments: --nthreads 8
[2025-10-12 22:39:06] Threads: 8
[2025-10-12 22:39:06] Checking for CVMFS
[2025-10-12 22:39:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 22:39:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 22:39:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 22:39:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 22:39:06] 2.11.2.0 3101 204483 84096 151645 2 58 15874087 20275201 1 130560 1 74679723 99.978 10444598 10355 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 22:39:06] CVMFS is ok
[2025-10-12 22:39:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 22:39:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 22:39:06] Further information can be found at the LHC@home message board.
[2025-10-12 22:39:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 22:39:06] Checking for apptainer binary...
[2025-10-12 22:39:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 22:39:06] Running /usr/bin/apptainer --version
[2025-10-12 22:39:06] apptainer version 1.3.2-1.el7
[2025-10-12 22:39:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 22:39:08] c-204-15.aglt2.org
[2025-10-12 22:39:08] apptainer works
[2025-10-12 22:39:08] Set ATHENA_PROC_NUMBER=8
[2025-10-12 22:39:08] Set ATHENA_CORE_NUMBER=8
[2025-10-12 22:39:08] Starting ATLAS job with PandaID=6840748933
[2025-10-12 22:39:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 00:55:46]  *** The last 200 lines of the pilot log: ***
[2025-10-13 00:55:46] 2025-10-13 04:55:13,352 | INFO     | fitting pss+swap vs Time
[2025-10-13 00:55:46] 2025-10-13 04:55:13,352 | INFO     | sum of square deviations: 729472282.0
[2025-10-13 00:55:46] 2025-10-13 04:55:13,353 | INFO     | sum of deviations: 4141189166.999992
[2025-10-13 00:55:46] 2025-10-13 04:55:13,353 | INFO     | mean x: 1760327224.0
[2025-10-13 00:55:46] 2025-10-13 04:55:13,353 | INFO     | mean y: 2517091.834586466
[2025-10-13 00:55:46] 2025-10-13 04:55:13,353 | INFO     | -- intersect: -9990800283.31959
[2025-10-13 00:55:46] 2025-10-13 04:55:13,354 | INFO     | intersect: -9990800283.31959
[2025-10-13 00:55:46] 2025-10-13 04:55:13,354 | INFO     | chi2: 1.7792077587780477
[2025-10-13 00:55:46] 2025-10-13 04:55:13,354 | INFO     | sum of square deviations: 650252192.0
[2025-10-13 00:55:46] 2025-10-13 04:55:13,355 | INFO     | sum of deviations: 4324352525.0
[2025-10-13 00:55:46] 2025-10-13 04:55:13,355 | INFO     | mean x: 1760327071.5
[2025-10-13 00:55:46] 2025-10-13 04:55:13,355 | INFO     | mean y: 2517444.59375
[2025-10-13 00:55:46] 2025-10-13 04:55:13,356 | INFO     | -- intersect: -11704132544.62594
[2025-10-13 00:55:46] 2025-10-13 04:55:13,356 | INFO     | intersect: -11704132544.62594
[2025-10-13 00:55:46] 2025-10-13 04:55:13,356 | INFO     | chi2: 1.7814718588943106
[2025-10-13 00:55:46] 2025-10-13 04:55:13,356 | INFO     | current chi2=1.7814718588943106 (change=-0.12725327354787694 %)
[2025-10-13 00:55:46] 2025-10-13 04:55:13,357 | INFO     | right removable region: 127
[2025-10-13 00:55:46] 2025-10-13 04:55:13,357 | INFO     | sum of square deviations: 650252192.0
[2025-10-13 00:55:46] 2025-10-13 04:55:13,358 | INFO     | sum of deviations: -17980031759.0
[2025-10-13 00:55:46] 2025-10-13 04:55:13,358 | INFO     | mean x: 1760327376.5
[2025-10-13 00:55:46] 2025-10-13 04:55:13,358 | INFO     | mean y: 2559040.140625
[2025-10-13 00:55:46] 2025-10-13 04:55:13,358 | INFO     | -- intersect: 48677123347.81027
[2025-10-13 00:55:46] 2025-10-13 04:55:13,358 | INFO     | intersect: 48677123347.81027
[2025-10-13 00:55:46] 2025-10-13 04:55:13,359 | INFO     | chi2: 0.16923900773202868
[2025-10-13 00:55:46] 2025-10-13 04:55:13,359 | INFO     | current chi2=0.16923900773202868 (change=90.48795696303273 %)
[2025-10-13 00:55:46] 2025-10-13 04:55:13,359 | INFO     | sum of square deviations: 576985702.0
[2025-10-13 00:55:46] 2025-10-13 04:55:13,360 | INFO     | sum of deviations: -20625684535.999996
[2025-10-13 00:55:46] 2025-10-13 04:55:13,360 | INFO     | mean x: 1760327529.0
[2025-10-13 00:55:46] 2025-10-13 04:55:13,360 | INFO     | mean y: 2564546.601626016
[2025-10-13 00:55:46] 2025-10-13 04:55:13,360 | INFO     | -- intersect: 62929531657.46148
[2025-10-13 00:55:46] 2025-10-13 04:55:13,361 | INFO     | intersect: 62929531657.46148
[2025-10-13 00:55:46] 2025-10-13 04:55:13,361 | INFO     | chi2: 0.12116640787942273
[2025-10-13 00:55:46] 2025-10-13 04:55:13,361 | INFO     | current chi2=0.12116640787942273 (change=28.405153455356825 %)
[2025-10-13 00:55:46] 2025-10-13 04:55:13,362 | INFO     | sum of square deviations: 509440249.5
[2025-10-13 00:55:46] 2025-10-13 04:55:13,362 | INFO     | sum of deviations: -17464057891.0
[2025-10-13 00:55:46] 2025-10-13 04:55:13,362 | INFO     | mean x: 1760327681.5
[2025-10-13 00:55:46] 2025-10-13 04:55:13,362 | INFO     | mean y: 2557386.9322033897
[2025-10-13 00:55:46] 2025-10-13 04:55:13,363 | INFO     | -- intersect: 60348131901.34994
[2025-10-13 00:55:46] 2025-10-13 04:55:13,363 | INFO     | intersect: 60348131901.34994
[2025-10-13 00:55:46] 2025-10-13 04:55:13,363 | INFO     | chi2: 0.1195487188617531
[2025-10-13 00:55:46] 2025-10-13 04:55:13,363 | INFO     | current chi2=0.1195487188617531 (change=1.3350969513592073 %)
[2025-10-13 00:55:46] 2025-10-13 04:55:13,363 | INFO     | left removable region: 30
[2025-10-13 00:55:46] 2025-10-13 04:55:13,364 | INFO     | sum of square deviations: 282974608.0
[2025-10-13 00:55:46] 2025-10-13 04:55:13,364 | INFO     | sum of deviations: -5089091285.999999
[2025-10-13 00:55:46] 2025-10-13 04:55:13,364 | INFO     | mean x: 1760327956.0
[2025-10-13 00:55:46] 2025-10-13 04:55:13,365 | INFO     | mean y: 2525772.3711340204
[2025-10-13 00:55:46] 2025-10-13 04:55:13,365 | INFO     | -- intersect: 31660736113.921608
[2025-10-13 00:55:46] 2025-10-13 04:55:13,365 | INFO     | intersect: 31660736113.921608
[2025-10-13 00:55:46] 2025-10-13 04:55:13,365 | INFO     | chi2: 0.06917067361535666
[2025-10-13 00:55:46] 2025-10-13 04:55:13,365 | INFO     | -- intersect: 31660736113.921608
[2025-10-13 00:55:46] 2025-10-13 04:55:13,366 | INFO     | current memory leak: -17.98 B/s (using 97 data points, chi2=0.07)
[2025-10-13 00:55:46] 2025-10-13 04:55:13,366 | INFO     | could have reported an average CPU frequency of 1995 MHz (8 samples)
[2025-10-13 00:55:46] 2025-10-13 04:55:13,366 | INFO     | ..............................
[2025-10-13 00:55:46] 2025-10-13 04:55:13,367 | INFO     | . Timing measurements:
[2025-10-13 00:55:46] 2025-10-13 04:55:13,367 | INFO     | . get job = 0 s
[2025-10-13 00:55:46] 2025-10-13 04:55:13,367 | INFO     | . initial setup = 2 s
[2025-10-13 00:55:46] 2025-10-13 04:55:13,367 | INFO     | . payload setup = 8 s
[2025-10-13 00:55:46] 2025-10-13 04:55:13,367 | INFO     | . stage-in = 0 s
[2025-10-13 00:55:46] 2025-10-13 04:55:13,367 | INFO     | . payload execution = 8105 s
[2025-10-13 00:55:46] 2025-10-13 04:55:13,368 | INFO     | . stage-out = 0 s
[2025-10-13 00:55:46] 2025-10-13 04:55:13,368 | INFO     | . log creation = 0 s
[2025-10-13 00:55:46] 2025-10-13 04:55:13,368 | INFO     | ..............................
[2025-10-13 00:55:46] 2025-10-13 04:55:13,461 | INFO     | 
[2025-10-13 00:55:46] 2025-10-13 04:55:13,461 | INFO     | job summary report
[2025-10-13 00:55:46] 2025-10-13 04:55:13,462 | INFO     | --------------------------------------------------
[2025-10-13 00:55:46] 2025-10-13 04:55:13,462 | INFO     | PanDA job id: 6840748933
[2025-10-13 00:55:46] 2025-10-13 04:55:13,462 | INFO     | task id: 46676269
[2025-10-13 00:55:46] 2025-10-13 04:55:13,462 | INFO     | errors: (none)
[2025-10-13 00:55:46] 2025-10-13 04:55:13,462 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 00:55:46] 2025-10-13 04:55:13,462 | INFO     | pilot state: finished 
[2025-10-13 00:55:46] 2025-10-13 04:55:13,463 | INFO     | transexitcode: 0
[2025-10-13 00:55:46] 2025-10-13 04:55:13,463 | INFO     | exeerrorcode: 0
[2025-10-13 00:55:46] 2025-10-13 04:55:13,463 | INFO     | exeerrordiag: 
[2025-10-13 00:55:46] 2025-10-13 04:55:13,463 | INFO     | exitcode: 0
[2025-10-13 00:55:46] 2025-10-13 04:55:13,463 | INFO     | exitmsg: OK
[2025-10-13 00:55:46] 2025-10-13 04:55:13,464 | INFO     | cpuconsumptiontime: 58697 s
[2025-10-13 00:55:46] 2025-10-13 04:55:13,464 | INFO     | nevents: 400
[2025-10-13 00:55:46] 2025-10-13 04:55:13,464 | INFO     | neventsw: 0
[2025-10-13 00:55:46] 2025-10-13 04:55:13,464 | INFO     | pid: 27030
[2025-10-13 00:55:46] 2025-10-13 04:55:13,464 | INFO     | pgrp: 27030
[2025-10-13 00:55:46] 2025-10-13 04:55:13,465 | INFO     | corecount: 8
[2025-10-13 00:55:46] 2025-10-13 04:55:13,465 | INFO     | event service: False
[2025-10-13 00:55:46] 2025-10-13 04:55:13,465 | INFO     | sizes: {0: 2348630, 1: 2348885, 7: 2349147, 12: 2349175, 8117: 2376917, 8119: 2385915, 8121: 2386099, 8130: 2386293}
[2025-10-13 00:55:46] 2025-10-13 04:55:13,465 | INFO     | --------------------------------------------------
[2025-10-13 00:55:46] 2025-10-13 04:55:13,466 | INFO     | 
[2025-10-13 00:55:46] 2025-10-13 04:55:13,466 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 00:55:46] 2025-10-13 04:55:13,497 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 00:55:46] 2025-10-13 04:55:13,498 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 00:55:46] 2025-10-13 04:55:13,498 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 00:55:46] 2025-10-13 04:55:13,498 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 00:55:46] 2025-10-13 04:55:13,498 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 00:55:46] 2025-10-13 04:55:13,498 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 00:55:46] 2025-10-13 04:55:13,499 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 00:55:46] 2025-10-13 04:55:13,499 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 00:55:46] 2025-10-13 04:55:13,499 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 00:55:46] 2025-10-13 04:55:13,499 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 00:55:46] 2025-10-13 04:55:13,500 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 00:55:46] 2025-10-13 04:55:13,500 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 00:55:46] 2025-10-13 04:55:13,500 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 00:55:46] 2025-10-13 04:55:13,501 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 00:55:46] 2025-10-13 04:55:13,501 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 00:55:46] 2025-10-13 04:55:13,501 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 00:55:46] 2025-10-13 04:55:13,501 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 00:55:46] 2025-10-13 04:55:13,501 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 00:55:46] 2025-10-13 04:55:13,502 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 00:55:46] 2025-10-13 04:55:13,502 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 00:55:46] 2025-10-13 04:55:13,502 | INFO     | job 6840748933 has completed (purged errors)
[2025-10-13 00:55:46] 2025-10-13 04:55:13,503 | INFO     | overall cleanup function is called
[2025-10-13 00:55:46] 2025-10-13 04:55:13,540 | INFO     | PID=20661 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 00:55:46] 2025-10-13 04:55:14,512 | INFO     | --- collectZombieJob: --- 10, [27030]
[2025-10-13 00:55:46] 2025-10-13 04:55:14,512 | INFO     | zombie collector waiting for pid 27030
[2025-10-13 00:55:46] 2025-10-13 04:55:14,512 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 00:55:46] 2025-10-13 04:55:14,513 | INFO     | collected zombie processes
[2025-10-13 00:55:46] 2025-10-13 04:55:14,513 | INFO     | will attempt to kill all subprocesses of pid=27030
[2025-10-13 00:55:46] 2025-10-13 04:55:14,603 | INFO     | process IDs to be killed: [27030] (in reverse order)
[2025-10-13 00:55:46] 2025-10-13 04:55:14,741 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 00:55:46] 2025-10-13 04:55:14,742 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 00:55:46] 2025-10-13 04:55:14,746 | INFO     | did not find any defunct processes belonging to 27030
[2025-10-13 00:55:46] 2025-10-13 04:55:14,749 | INFO     | did not find any defunct processes belonging to 27030
[2025-10-13 00:55:46] 2025-10-13 04:55:14,750 | INFO     | ready for new job
[2025-10-13 00:55:46] 2025-10-13 04:55:14,750 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 00:55:46] 2025-10-13 04:55:14,752 | INFO     | ***************************************
[2025-10-13 00:55:46] 2025-10-13 04:55:14,752 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 00:55:46] 2025-10-13 04:55:14,752 | INFO     | ***************************************
[2025-10-13 00:55:46] 2025-10-13 04:55:14,752 | INFO     | 
[2025-10-13 00:55:46] 2025-10-13 04:55:14,753 | INFO     | architecture information:
[2025-10-13 00:55:46] 2025-10-13 04:55:14,753 | INFO     | executing command: cat /etc/os-release
[2025-10-13 00:55:46] 2025-10-13 04:55:14,774 | INFO     | cat /etc/os-release:
[2025-10-13 00:55:46] NAME="CentOS Linux"
[2025-10-13 00:55:46] VERSION="7 (Core)"
[2025-10-13 00:55:46] ID="centos"
[2025-10-13 00:55:46] ID_LIKE="rhel fedora"
[2025-10-13 00:55:46] VERSION_ID="7"
[2025-10-13 00:55:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 00:55:46] ANSI_COLOR="0;31"
[2025-10-13 00:55:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 00:55:46] HOME_URL="https://www.centos.org/"
[2025-10-13 00:55:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 00:55:46] 
[2025-10-13 00:55:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 00:55:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 00:55:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 00:55:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 00:55:46] 
[2025-10-13 00:55:46] 2025-10-13 04:55:14,775 | INFO     | ***************************************
[2025-10-13 00:55:46] 2025-10-13 04:55:15,278 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 00:55:46] 2025-10-13 04:55:15,301 | INFO     | sufficient remaining disk space (18581815296 B)
[2025-10-13 00:55:46] 2025-10-13 04:55:15,302 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 00:55:46] 2025-10-13 04:55:15,302 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 00:55:46] 2025-10-13 04:55:15,302 | INFO     | update_server=False
[2025-10-13 00:55:46] 2025-10-13 04:55:15,302 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 00:55:46] 2025-10-13 04:55:15,303 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:55:46] 2025-10-13 04:55:15,445 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 00:55:46] 2025-10-13 04:55:15,445 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 00:55:46] 2025-10-13 04:55:15,445 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:55:46] 2025-10-13 04:55:15,445 | INFO     | will abort loop
[2025-10-13 00:55:46] 2025-10-13 04:55:15,703 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 00:55:46] 2025-10-13 04:55:15,986 | INFO     | all payload control threads have been joined
[2025-10-13 00:55:46] 2025-10-13 04:55:16,236 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 00:55:46] 2025-10-13 04:55:16,308 | INFO     | [job] retrieve thread has finished
[2025-10-13 00:55:46] 2025-10-13 04:55:16,309 | INFO     | [job] queue monitor thread has finished
[2025-10-13 00:55:46] 2025-10-13 04:55:16,378 | INFO     | all data control threads have been joined
[2025-10-13 00:55:46] 2025-10-13 04:55:16,451 | INFO     | [job] job monitor thread has finished
[2025-10-13 00:55:46] 2025-10-13 04:55:16,635 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 00:55:46] 2025-10-13 04:55:16,756 | INFO     | [job] validate thread has finished
[2025-10-13 00:55:46] 2025-10-13 04:55:16,963 | INFO     | all job control threads have been joined
[2025-10-13 00:55:46] 2025-10-13 04:55:16,991 | INFO     | [payload] control thread has finished
[2025-10-13 00:55:46] 2025-10-13 04:55:17,097 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 00:55:46] 2025-10-13 04:55:17,201 | INFO     | [payload] failed_post thread has finished
[2025-10-13 00:55:46] 2025-10-13 04:55:17,251 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 00:55:46] 2025-10-13 04:55:17,364 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 00:55:46] 2025-10-13 04:55:17,384 | INFO     | [data] control thread has finished
[2025-10-13 00:55:46] 2025-10-13 04:55:17,523 | INFO     | [data] copytool_in thread has finished
[2025-10-13 00:55:46] 2025-10-13 04:55:17,798 | INFO     | [payload] validate_post thread has finished
[2025-10-13 00:55:46] 2025-10-13 04:55:17,964 | INFO     | [job] control thread has finished
[2025-10-13 00:55:46] 2025-10-13 04:55:18,241 | INFO     | [data] copytool_out thread has finished
[2025-10-13 00:55:46] 2025-10-13 04:55:19,710 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 00:55:46] 2025-10-13 04:55:38,694 | INFO     | [monitor] cgroup control has ended
[2025-10-13 00:55:46] 2025-10-13 04:55:40,574 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139836853323584)>', '<ExcThread(monitor, started 139836634375936)>']
[2025-10-13 00:55:46] 2025-10-13 04:55:45,581 | INFO     | all workflow threads have been joined
[2025-10-13 00:55:46] 2025-10-13 04:55:45,582 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 00:55:46] 2025-10-13 04:55:45,582 | INFO     | traces error code: 0
[2025-10-13 00:55:46] 2025-10-13 04:55:45,583 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 00:55:46] 2025-10-13 04:55:45,747 | INFO     | PID=20661 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 00:55:46] 2025-10-13 04:55:45,748 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 00:55:46] 2025-10-13 04:55:45,748 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 00:55:46] 2025-10-13 04:55:45,748 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 00:55:46] 2025-10-13 04:55:45,748 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 00:55:46] 2025-10-13 04:55:45,749 | CRITICAL | thread 'MainThread' is not alive
[2025-10-13 00:55:46] 2025-10-13 04:55:45,749 | INFO     | [monitor] control thread has ended
[2025-10-13 00:55:46] 2025-10-13 04:55:45,872 [wrapper] ==== pilot stdout END ====
[2025-10-13 00:55:46] 2025-10-13 04:55:45,877 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 00:55:46] 2025-10-13 04:55:45,882 [wrapper] pilotpid: 20661
[2025-10-13 00:55:46] 2025-10-13 04:55:45,886 [wrapper] Pilot exit status: 0
[2025-10-13 00:55:46] 2025-10-13 04:55:45,905 [wrapper] pandaids: 6840748933
[2025-10-13 00:55:46] 2025-10-13 04:55:45,951 [wrapper] cleanup supervisor_pilot 28181 20662
[2025-10-13 00:55:46] 2025-10-13 04:55:45,957 [wrapper] Test setup, not cleaning
[2025-10-13 00:55:46] 2025-10-13 04:55:45,962 [wrapper] apfmon messages muted
[2025-10-13 00:55:46] 2025-10-13 04:55:45,966 [wrapper] ==== wrapper stdout END ====
[2025-10-13 00:55:46] 2025-10-13 04:55:45,971 [wrapper] ==== wrapper stderr END ====
[2025-10-13 00:55:46]  *** Error codes and diagnostics ***
[2025-10-13 00:55:46]     "exeErrorCode": 0,
[2025-10-13 00:55:46]     "exeErrorDiag": "",
[2025-10-13 00:55:46]     "pilotErrorCode": 0,
[2025-10-13 00:55:46]     "pilotErrorDiag": "",
[2025-10-13 00:55:46]  *** Listing of results directory ***
[2025-10-13 00:55:46] total 416836
[2025-10-13 00:55:46] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 16:08 pilot3.tar.gz
[2025-10-13 00:55:46] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 16:20 queuedata.json
[2025-10-13 00:55:46] -rwx------ 1 boincer umatlas     36292 Oct 12 16:20 runpilot2-wrapper.sh
[2025-10-13 00:55:46] -rw-r--r-- 1 boincer umatlas       100 Oct 12 22:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 00:55:46] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 22:39 run_atlas
[2025-10-13 00:55:46] -rw-r--r-- 1 boincer umatlas       105 Oct 12 22:39 job.xml
[2025-10-13 00:55:46] -rw-r--r-- 2 boincer umatlas 220783977 Oct 12 22:39 EVNT.46676267._004492.pool.root.1
[2025-10-13 00:55:46] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 22:39 start_atlas.sh
[2025-10-13 00:55:46] drwxrwx--x 2 boincer umatlas      4096 Oct 12 22:39 shared
[2025-10-13 00:55:46] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 22:39 input.tar.gz
[2025-10-13 00:55:46] -rw-r--r-- 1 boincer umatlas         0 Oct 12 22:39 boinc_lockfile
[2025-10-13 00:55:46] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 22:39 pandaJob.out
[2025-10-13 00:55:46] -rw------- 1 boincer umatlas    974373 Oct 12 22:39 agis_schedconf.cvmfs.json
[2025-10-13 00:55:46] -rw------- 1 boincer umatlas   1560580 Oct 12 22:39 agis_ddmendpoints.agis.ALL.json
[2025-10-13 00:55:46] drwx------ 5 boincer umatlas      4096 Oct 12 22:39 pilot3
[2025-10-13 00:55:46] -rw------- 1 boincer umatlas 199114078 Oct 13 00:54 HITS.46676269._088499.pool.root.1
[2025-10-13 00:55:46] -rw-r--r-- 1 boincer umatlas       529 Oct 13 00:54 boinc_task_state.xml
[2025-10-13 00:55:46] -rw------- 1 boincer umatlas      1050 Oct 13 00:54 memory_monitor_summary.json
[2025-10-13 00:55:46] -rw------- 1 boincer umatlas    380822 Oct 13 00:55 log.46676269._088499.job.log.tgz.1
[2025-10-13 00:55:46] -rw------- 1 boincer umatlas      7850 Oct 13 00:55 heartbeat.json
[2025-10-13 00:55:46] -rw-r--r-- 1 boincer umatlas      5910 Oct 13 00:55 init_data.xml
[2025-10-13 00:55:46] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 00:55 boinc_mmap_file
[2025-10-13 00:55:46] -rw-r--r-- 1 boincer umatlas        27 Oct 13 00:55 wrapper_checkpoint.txt
[2025-10-13 00:55:46] -rw------- 1 boincer umatlas        95 Oct 13 00:55 pilot_heartbeat.json
[2025-10-13 00:55:46] -rw------- 1 boincer umatlas       815 Oct 13 00:55 pilotlog.txt
[2025-10-13 00:55:46] -rw------- 1 boincer umatlas   1142586 Oct 13 00:55 log.46676269._088499.job.log.1
[2025-10-13 00:55:46] -rw------- 1 boincer umatlas       357 Oct 13 00:55 output.list
[2025-10-13 00:55:46] -rw-r--r-- 1 boincer umatlas       620 Oct 13 00:55 runtime_log
[2025-10-13 00:55:46] -rw------- 1 boincer umatlas   1546240 Oct 13 00:55 result.tar.gz
[2025-10-13 00:55:46] -rw------- 1 boincer umatlas       660 Oct 13 00:55 v6iMDmrjHS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmLwUMDmYXDq2n.diag
[2025-10-13 00:55:46] -rw-r--r-- 1 boincer umatlas      8703 Oct 13 00:55 runtime_log.err
[2025-10-13 00:55:46] -rw-r--r-- 1 boincer umatlas     20998 Oct 13 00:55 stderr.txt
[2025-10-13 00:55:46] HITS file was successfully produced:
[2025-10-13 00:55:46] -rw------- 1 boincer umatlas 199114078 Oct 13 00:54 shared/HITS.pool.root.1
[2025-10-13 00:55:46]  *** Contents of shared directory: ***
[2025-10-13 00:55:46] total 412152
[2025-10-13 00:55:46] -rw-r--r-- 2 boincer umatlas 220783977 Oct 12 22:39 ATLAS.root_0
[2025-10-13 00:55:46] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 22:39 start_atlas.sh
[2025-10-13 00:55:46] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 22:39 input.tar.gz
[2025-10-13 00:55:46] -rw------- 1 boincer umatlas 199114078 Oct 13 00:54 HITS.pool.root.1
[2025-10-13 00:55:46] -rw------- 1 boincer umatlas   1546240 Oct 13 00:55 result.tar.gz
00:55:47 (16922): run_atlas exited; CPU time 58628.128964
00:55:47 (16922): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN