Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:47:13 (2828110): wrapper (7.7.26015): starting
18:47:13 (2828110): wrapper: running run_atlas (--nthreads 6)
[2025-10-13 18:47:13] Arguments: --nthreads 6
[2025-10-13 18:47:13] Threads: 6
[2025-10-13 18:47:13] Checking for CVMFS
[2025-10-13 18:47:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 18:47:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 18:47:13] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 18:47:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 18:47:14] 2.11.5.0 3385007 5688 97364 151656 3 57 13659571 20971520 929 130560 0 11282582 99.996 192427 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.35.143:3126 1
[2025-10-13 18:47:14] CVMFS is ok
[2025-10-13 18:47:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 18:47:14] Checking for apptainer binary...
[2025-10-13 18:47:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 18:47:14] Running /usr/bin/apptainer --version
[2025-10-13 18:47:14] apptainer version 1.3.6-1.el9
[2025-10-13 18:47:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 18:47:14] testio006
[2025-10-13 18:47:14] apptainer works
[2025-10-13 18:47:14] Set ATHENA_PROC_NUMBER=6
[2025-10-13 18:47:14] Set ATHENA_CORE_NUMBER=6
[2025-10-13 18:47:14] Starting ATLAS job with PandaID=6840715222
[2025-10-13 18:47:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 20:04:38]  *** The last 200 lines of the pilot log: ***
[2025-10-13 20:04:38] 2025-10-13 11:03:32,278 | INFO     | monitor loop #352: job 0:6840715222 is in state 'finished'
[2025-10-13 20:04:38] 2025-10-13 11:03:32,279 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 20:04:38] 2025-10-13 11:03:32,483 | INFO     | time since job start (4566s) is within the limit (172800.0s)
[2025-10-13 20:04:38] 2025-10-13 11:03:34,488 | INFO     | time since job start (4568s) is within the limit (172800.0s)
[2025-10-13 20:04:38] 2025-10-13 11:03:34,781 | INFO     | monitor loop #353: job 0:6840715222 is in state 'finished'
[2025-10-13 20:04:38] 2025-10-13 11:03:34,782 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 20:04:38] 2025-10-13 11:03:36,493 | INFO     | time since job start (4570s) is within the limit (172800.0s)
[2025-10-13 20:04:38] 2025-10-13 11:03:37,284 | INFO     | monitor loop #354: job 0:6840715222 is in state 'finished'
[2025-10-13 20:04:38] 2025-10-13 11:03:37,284 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 20:04:38] 2025-10-13 11:03:37,577 | INFO     | PID=2831903 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 20:04:38] 2025-10-13 11:03:37,577 | INFO     | .. there are 2 such processes running
[2025-10-13 20:04:38] 2025-10-13 11:03:38,578 | INFO     | time since job start (4572s) is within the limit (172800.0s)
[2025-10-13 20:04:38] 2025-10-13 11:03:39,787 | INFO     | monitor loop #355: job 0:6840715222 is in state 'finished'
[2025-10-13 20:04:38] 2025-10-13 11:03:39,787 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 20:04:38] 2025-10-13 11:03:40,583 | INFO     | time since job start (4574s) is within the limit (172800.0s)
[2025-10-13 20:04:38] 2025-10-13 11:03:42,290 | INFO     | monitor loop #356: job 0:6840715222 is in state 'finished'
[2025-10-13 20:04:38] 2025-10-13 11:03:42,290 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 20:04:38] 2025-10-13 11:03:42,588 | INFO     | time since job start (4576s) is within the limit (172800.0s)
[2025-10-13 20:04:38] 2025-10-13 11:03:44,593 | INFO     | time since job start (4578s) is within the limit (172800.0s)
[2025-10-13 20:04:38] 2025-10-13 11:03:44,793 | INFO     | monitor loop #357: job 0:6840715222 is in state 'finished'
[2025-10-13 20:04:38] 2025-10-13 11:03:44,793 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 20:04:38] 2025-10-13 11:03:46,598 | INFO     | time since job start (4580s) is within the limit (172800.0s)
[2025-10-13 20:04:38] 2025-10-13 11:03:47,296 | INFO     | monitor loop #358: job 0:6840715222 is in state 'finished'
[2025-10-13 20:04:38] 2025-10-13 11:03:47,296 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 20:04:38] 2025-10-13 11:03:48,604 | INFO     | time since job start (4582s) is within the limit (172800.0s)
[2025-10-13 20:04:38] 2025-10-13 11:03:49,799 | INFO     | monitor loop #359: job 0:6840715222 is in state 'finished'
[2025-10-13 20:04:38] 2025-10-13 11:03:49,799 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 20:04:38] 2025-10-13 11:03:50,609 | INFO     | time since job start (4584s) is within the limit (172800.0s)
[2025-10-13 20:04:38] 2025-10-13 11:03:52,302 | INFO     | monitor loop #360: job 0:6840715222 is in state 'finished'
[2025-10-13 20:04:38] 2025-10-13 11:03:52,302 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 20:04:38] 2025-10-13 11:03:52,614 | INFO     | time since job start (4586s) is within the limit (172800.0s)
[2025-10-13 20:04:38] 2025-10-13 11:03:54,620 | INFO     | time since job start (4588s) is within the limit (172800.0s)
[2025-10-13 20:04:38] 2025-10-13 11:03:54,805 | INFO     | monitor loop #361: job 0:6840715222 is in state 'finished'
[2025-10-13 20:04:38] 2025-10-13 11:03:54,805 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 20:04:38] 2025-10-13 11:03:56,625 | INFO     | time since job start (4590s) is within the limit (172800.0s)
[2025-10-13 20:04:38] 2025-10-13 11:03:56,924 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 20:04:38] 2025-10-13 11:03:56,926 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4010.280375
[2025-10-13 20:04:38] 2025-10-13 11:03:56,928 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6840715222/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 20:04:38] 2025-10-13 11:03:56,929 | INFO     | extracted standard info from prmon json
[2025-10-13 20:04:38] 2025-10-13 11:03:56,929 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 20:04:38] 2025-10-13 11:03:56,929 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 20:04:38] 2025-10-13 11:03:56,929 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 20:04:38] 2025-10-13 11:03:56,929 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 20:04:38] 2025-10-13 11:03:56,930 | INFO     | fitting pss+swap vs Time
[2025-10-13 20:04:38] 2025-10-13 11:03:56,930 | INFO     | sum of square deviations: 93237405.94029854
[2025-10-13 20:04:38] 2025-10-13 11:03:56,930 | INFO     | sum of deviations: -3306989493.014925
[2025-10-13 20:04:38] 2025-10-13 11:03:56,930 | INFO     | mean x: 1760351187.0298507
[2025-10-13 20:04:38] 2025-10-13 11:03:56,930 | INFO     | mean y: 2477305.5074626864
[2025-10-13 20:04:38] 2025-10-13 11:03:56,930 | INFO     | -- intersect: 62439466202.98544
[2025-10-13 20:04:38] 2025-10-13 11:03:56,930 | INFO     | intersect: 62439466202.98544
[2025-10-13 20:04:38] 2025-10-13 11:03:56,931 | INFO     | chi2: 0.039547752572906276
[2025-10-13 20:04:38] 2025-10-13 11:03:56,931 | INFO     | -- intersect: 62439466202.98544
[2025-10-13 20:04:38] 2025-10-13 11:03:56,931 | INFO     | current memory leak: -35.47 B/s (using 67 data points, chi2=0.04)
[2025-10-13 20:04:38] 2025-10-13 11:03:56,931 | INFO     | could have reported an average CPU frequency of 3990 MHz (6 samples)
[2025-10-13 20:04:38] 2025-10-13 11:03:56,931 | INFO     | ..............................
[2025-10-13 20:04:38] 2025-10-13 11:03:56,931 | INFO     | . Timing measurements:
[2025-10-13 20:04:38] 2025-10-13 11:03:56,931 | INFO     | . get job = 0 s
[2025-10-13 20:04:38] 2025-10-13 11:03:56,931 | INFO     | . initial setup = 6 s
[2025-10-13 20:04:38] 2025-10-13 11:03:56,931 | INFO     | . payload setup = 4 s
[2025-10-13 20:04:38] 2025-10-13 11:03:56,931 | INFO     | . stage-in = 0 s
[2025-10-13 20:04:38] 2025-10-13 11:03:56,931 | INFO     | . payload execution = 4486 s
[2025-10-13 20:04:38] 2025-10-13 11:03:56,931 | INFO     | . stage-out = 0 s
[2025-10-13 20:04:38] 2025-10-13 11:03:56,931 | INFO     | . log creation = 0 s
[2025-10-13 20:04:38] 2025-10-13 11:03:56,931 | INFO     | ..............................
[2025-10-13 20:04:38] 2025-10-13 11:03:56,983 | INFO     | 
[2025-10-13 20:04:38] 2025-10-13 11:03:56,983 | INFO     | job summary report
[2025-10-13 20:04:38] 2025-10-13 11:03:56,984 | INFO     | --------------------------------------------------
[2025-10-13 20:04:38] 2025-10-13 11:03:56,984 | INFO     | PanDA job id: 6840715222
[2025-10-13 20:04:38] 2025-10-13 11:03:56,984 | INFO     | task id: 46676269
[2025-10-13 20:04:38] 2025-10-13 11:03:56,984 | INFO     | errors: (none)
[2025-10-13 20:04:38] 2025-10-13 11:03:56,984 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 20:04:38] 2025-10-13 11:03:56,984 | INFO     | pilot state: finished 
[2025-10-13 20:04:38] 2025-10-13 11:03:56,984 | INFO     | transexitcode: 0
[2025-10-13 20:04:38] 2025-10-13 11:03:56,984 | INFO     | exeerrorcode: 0
[2025-10-13 20:04:38] 2025-10-13 11:03:56,984 | INFO     | exeerrordiag: 
[2025-10-13 20:04:38] 2025-10-13 11:03:56,984 | INFO     | exitcode: 0
[2025-10-13 20:04:38] 2025-10-13 11:03:56,984 | INFO     | exitmsg: OK
[2025-10-13 20:04:38] 2025-10-13 11:03:56,984 | INFO     | cpuconsumptiontime: 24366 s
[2025-10-13 20:04:38] 2025-10-13 11:03:56,984 | INFO     | nevents: 400
[2025-10-13 20:04:38] 2025-10-13 11:03:56,984 | INFO     | neventsw: 0
[2025-10-13 20:04:38] 2025-10-13 11:03:56,984 | INFO     | pid: 2838661
[2025-10-13 20:04:38] 2025-10-13 11:03:56,984 | INFO     | pgrp: 2838661
[2025-10-13 20:04:38] 2025-10-13 11:03:56,984 | INFO     | corecount: 6
[2025-10-13 20:04:38] 2025-10-13 11:03:56,984 | INFO     | event service: False
[2025-10-13 20:04:38] 2025-10-13 11:03:56,984 | INFO     | sizes: {0: 2348857, 3: 2349119, 11: 2349147, 4494: 2375316, 4495: 2384370, 4576: 2384508}
[2025-10-13 20:04:38] 2025-10-13 11:03:56,984 | INFO     | --------------------------------------------------
[2025-10-13 20:04:38] 2025-10-13 11:03:56,984 | INFO     | 
[2025-10-13 20:04:38] 2025-10-13 11:03:56,984 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-13 20:04:38] 2025-10-13 11:03:56,998 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 20:04:38] 2025-10-13 11:03:56,998 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 20:04:38] 2025-10-13 11:03:56,998 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 20:04:38] 2025-10-13 11:03:56,998 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 20:04:38] 2025-10-13 11:03:56,998 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 20:04:38] 2025-10-13 11:03:56,998 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 20:04:38] 2025-10-13 11:03:56,998 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 20:04:38] 2025-10-13 11:03:56,998 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 20:04:38] 2025-10-13 11:03:56,998 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 20:04:38] 2025-10-13 11:03:56,998 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 20:04:38] 2025-10-13 11:03:56,998 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 20:04:38] 2025-10-13 11:03:56,999 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 20:04:38] 2025-10-13 11:03:56,999 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 20:04:38] 2025-10-13 11:03:56,999 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 20:04:38] 2025-10-13 11:03:56,999 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 20:04:38] 2025-10-13 11:03:56,999 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 20:04:38] 2025-10-13 11:03:56,999 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 20:04:38] 2025-10-13 11:03:56,999 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 20:04:38] 2025-10-13 11:03:56,999 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 20:04:38] 2025-10-13 11:03:56,999 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 20:04:38] 2025-10-13 11:03:56,999 | INFO     | job 6840715222 has completed (purged errors)
[2025-10-13 20:04:38] 2025-10-13 11:03:56,999 | INFO     | overall cleanup function is called
[2025-10-13 20:04:38] 2025-10-13 11:03:58,006 | INFO     | --- collectZombieJob: --- 10, [2838661]
[2025-10-13 20:04:38] 2025-10-13 11:03:58,006 | INFO     | zombie collector waiting for pid 2838661
[2025-10-13 20:04:38] 2025-10-13 11:03:58,006 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 20:04:38] 2025-10-13 11:03:58,006 | INFO     | collected zombie processes
[2025-10-13 20:04:38] 2025-10-13 11:03:58,006 | INFO     | will attempt to kill all subprocesses of pid=2838661
[2025-10-13 20:04:38] 2025-10-13 11:03:58,072 | INFO     | process IDs to be killed: [2838661] (in reverse order)
[2025-10-13 20:04:38] 2025-10-13 11:03:58,107 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 20:04:38] 2025-10-13 11:03:58,107 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 20:04:38] 2025-10-13 11:03:58,110 | INFO     | did not find any defunct processes belonging to 2838661
[2025-10-13 20:04:38] 2025-10-13 11:03:58,112 | INFO     | did not find any defunct processes belonging to 2838661
[2025-10-13 20:04:38] 2025-10-13 11:03:58,112 | INFO     | ready for new job
[2025-10-13 20:04:38] 2025-10-13 11:03:58,112 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 20:04:38] 2025-10-13 11:03:58,113 | INFO     | ***************************************
[2025-10-13 20:04:38] 2025-10-13 11:03:58,113 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 20:04:38] 2025-10-13 11:03:58,113 | INFO     | ***************************************
[2025-10-13 20:04:38] 2025-10-13 11:03:58,113 | INFO     | 
[2025-10-13 20:04:38] 2025-10-13 11:03:58,114 | INFO     | architecture information:
[2025-10-13 20:04:38] 2025-10-13 11:03:58,114 | INFO     | executing command: cat /etc/os-release
[2025-10-13 20:04:38] 2025-10-13 11:03:58,122 | INFO     | cat /etc/os-release:
[2025-10-13 20:04:38] NAME="CentOS Linux"
[2025-10-13 20:04:38] VERSION="7 (Core)"
[2025-10-13 20:04:38] ID="centos"
[2025-10-13 20:04:38] ID_LIKE="rhel fedora"
[2025-10-13 20:04:38] VERSION_ID="7"
[2025-10-13 20:04:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 20:04:38] ANSI_COLOR="0;31"
[2025-10-13 20:04:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 20:04:38] HOME_URL="https://www.centos.org/"
[2025-10-13 20:04:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 20:04:38] 
[2025-10-13 20:04:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 20:04:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 20:04:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 20:04:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 20:04:38] 
[2025-10-13 20:04:38] 2025-10-13 11:03:58,123 | INFO     | ***************************************
[2025-10-13 20:04:38] 2025-10-13 11:03:58,625 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-13 20:04:38] 2025-10-13 11:03:58,635 | INFO     | sufficient remaining disk space (83579895808 B)
[2025-10-13 20:04:38] 2025-10-13 11:03:58,635 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 20:04:38] 2025-10-13 11:03:58,635 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 20:04:38] 2025-10-13 11:03:58,635 | INFO     | update_server=False
[2025-10-13 20:04:38] 2025-10-13 11:03:58,635 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 20:04:38] 2025-10-13 11:03:58,636 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 20:04:38] 2025-10-13 11:03:58,636 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 20:04:38] 2025-10-13 11:03:58,636 | INFO     | aborting loop
[2025-10-13 20:04:38] 2025-10-13 11:03:58,802 | INFO     | all job control threads have been joined
[2025-10-13 20:04:38] 2025-10-13 11:03:58,827 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 20:04:38] 2025-10-13 11:03:58,889 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 20:04:38] 2025-10-13 11:03:58,940 | INFO     | all data control threads have been joined
[2025-10-13 20:04:38] 2025-10-13 11:03:59,636 | INFO     | [job] job monitor thread has finished
[2025-10-13 20:04:38] 2025-10-13 11:03:59,641 | INFO     | [job] retrieve thread has finished
[2025-10-13 20:04:38] 2025-10-13 11:03:59,641 | INFO     | [job] queue monitor thread has finished
[2025-10-13 20:04:38] 2025-10-13 11:03:59,667 | INFO     | [payload] validate_post thread has finished
[2025-10-13 20:04:38] 2025-10-13 11:03:59,689 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 20:04:38] 2025-10-13 11:03:59,792 | INFO     | all payload control threads have been joined
[2025-10-13 20:04:38] 2025-10-13 11:03:59,807 | INFO     | [job] control thread has finished
[2025-10-13 20:04:38] 2025-10-13 11:03:59,853 | INFO     | [data] copytool_in thread has finished
[2025-10-13 20:04:38] 2025-10-13 11:03:59,879 | INFO     | [payload] failed_post thread has finished
[2025-10-13 20:04:38] 2025-10-13 11:03:59,945 | INFO     | [data] control thread has finished
[2025-10-13 20:04:38] 2025-10-13 11:04:00,403 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 20:04:38] 2025-10-13 11:04:00,798 | INFO     | [payload] control thread has finished
[2025-10-13 20:04:38] 2025-10-13 11:04:00,808 | INFO     | [job] validate thread has finished
[2025-10-13 20:04:38] 2025-10-13 11:04:00,894 | INFO     | [data] copytool_out thread has finished
[2025-10-13 20:04:38] 2025-10-13 11:04:01,052 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 20:04:38] 2025-10-13 11:04:02,832 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 20:04:38] 2025-10-13 11:04:09,289 | INFO     | job.realtimelogging is not enabled
[2025-10-13 20:04:38] 2025-10-13 11:04:10,295 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 20:04:38] 2025-10-13 11:04:29,784 | INFO     | PID=2831903 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 20:04:38] 2025-10-13 11:04:29,784 | INFO     | .. there are 2 such processes running
[2025-10-13 20:04:38] 2025-10-13 11:04:29,784 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 20:04:38] 2025-10-13 11:04:29,784 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 20:04:38] 2025-10-13 11:04:29,784 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 20:04:38] 2025-10-13 11:04:32,883 | INFO     | [monitor] cgroup control has ended
[2025-10-13 20:04:38] 2025-10-13 11:04:33,676 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140626717353792)>', '<ExcThread(monitor, started 140626087638784)>']
[2025-10-13 20:04:38] 2025-10-13 11:04:33,804 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 20:04:38] 2025-10-13 11:04:33,805 | INFO     | [monitor] control thread has ended
[2025-10-13 20:04:38] 2025-10-13 11:04:38,701 | INFO     | all workflow threads have been joined
[2025-10-13 20:04:38] 2025-10-13 11:04:38,702 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 20:04:38] 2025-10-13 11:04:38,702 | INFO     | traces error code: 0
[2025-10-13 20:04:38] 2025-10-13 11:04:38,702 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 20:04:38] 2025-10-13 11:04:38,759 [wrapper] ==== pilot stdout END ====
[2025-10-13 20:04:38] 2025-10-13 11:04:38,761 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 20:04:38] 2025-10-13 11:04:38,762 [wrapper] pilotpid: 2831903
[2025-10-13 20:04:38] 2025-10-13 11:04:38,763 [wrapper] Pilot exit status: 0
[2025-10-13 20:04:38] 2025-10-13 11:04:38,768 [wrapper] pandaids: 6840715222
[2025-10-13 20:04:38] 2025-10-13 11:04:38,786 [wrapper] cleanup supervisor_pilot 2874415 2831904
[2025-10-13 20:04:38] 2025-10-13 11:04:38,787 [wrapper] Test setup, not cleaning
[2025-10-13 20:04:38] 2025-10-13 11:04:38,789 [wrapper] apfmon messages muted
[2025-10-13 20:04:38] 2025-10-13 11:04:38,790 [wrapper] ==== wrapper stdout END ====
[2025-10-13 20:04:38] 2025-10-13 11:04:38,791 [wrapper] ==== wrapper stderr END ====
[2025-10-13 20:04:38]  *** Error codes and diagnostics ***
[2025-10-13 20:04:38]     "exeErrorCode": 0,
[2025-10-13 20:04:38]     "exeErrorDiag": "",
[2025-10-13 20:04:38]     "pilotErrorCode": 0,
[2025-10-13 20:04:38]     "pilotErrorDiag": "",
[2025-10-13 20:04:38]  *** Listing of results directory ***
[2025-10-13 20:04:38] total 406608
[2025-10-13 20:04:38] -rw-r--r--. 1 boinc boinc    557409 Oct 13 04:50 pilot3.tar.gz
[2025-10-13 20:04:38] -rw-r--r--. 1 boinc boinc      5112 Oct 13 05:01 queuedata.json
[2025-10-13 20:04:38] -rwx------. 1 boinc boinc     36292 Oct 13 05:02 runpilot2-wrapper.sh
[2025-10-13 20:04:38] -rw-r--r--. 1 boinc boinc       100 Oct 13 18:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 20:04:38] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 18:47 run_atlas
[2025-10-13 20:04:38] -rw-r--r--. 1 boinc boinc       105 Oct 13 18:47 job.xml
[2025-10-13 20:04:38] -rw-r--r--. 2 boinc boinc 220477771 Oct 13 18:47 EVNT.46676267._004481.pool.root.1
[2025-10-13 20:04:38] -rw-r--r--. 2 boinc boinc     15120 Oct 13 18:47 start_atlas.sh
[2025-10-13 20:04:38] drwxrwx--x. 2 boinc boinc        68 Oct 13 18:47 shared
[2025-10-13 20:04:38] -rw-r--r--. 2 boinc boinc    569681 Oct 13 18:47 input.tar.gz
[2025-10-13 20:04:38] -rw-r--r--. 1 boinc boinc      9465 Oct 13 18:47 init_data.xml
[2025-10-13 20:04:38] -rw-r--r--. 1 boinc boinc         0 Oct 13 18:47 boinc_lockfile
[2025-10-13 20:04:38] -rw-r--r--. 1 boinc boinc      2550 Oct 13 18:47 pandaJob.out
[2025-10-13 20:04:38] -rw-------. 1 boinc boinc    972849 Oct 13 18:47 agis_schedconf.cvmfs.json
[2025-10-13 20:04:38] -rw-------. 1 boinc boinc   1560580 Oct 13 18:47 agis_ddmendpoints.agis.ALL.json
[2025-10-13 20:04:38] drwx------. 5 boinc boinc      4096 Oct 13 18:47 pilot3
[2025-10-13 20:04:38] -rw-------. 1 boinc boinc 190048390 Oct 13 20:02 HITS.46676269._088174.pool.root.1
[2025-10-13 20:04:38] -rw-r--r--. 1 boinc boinc       529 Oct 13 20:02 boinc_task_state.xml
[2025-10-13 20:04:38] -rw-------. 1 boinc boinc      1016 Oct 13 20:02 memory_monitor_summary.json
[2025-10-13 20:04:38] -rw-------. 1 boinc boinc    297064 Oct 13 20:02 log.46676269._088174.job.log.tgz.1
[2025-10-13 20:04:38] -rw-------. 1 boinc boinc        95 Oct 13 20:03 pilot_heartbeat.json
[2025-10-13 20:04:38] -rw-------. 1 boinc boinc      7751 Oct 13 20:03 heartbeat.json
[2025-10-13 20:04:38] -rw-r--r--. 1 boinc boinc      8192 Oct 13 20:04 boinc_mmap_file
[2025-10-13 20:04:38] -rw-r--r--. 1 boinc boinc        27 Oct 13 20:04 wrapper_checkpoint.txt
[2025-10-13 20:04:38] -rw-------. 1 boinc boinc      4895 Oct 13 20:04 pilotlog.txt
[2025-10-13 20:04:38] -rw-------. 1 boinc boinc    677472 Oct 13 20:04 log.46676269._088174.job.log.1
[2025-10-13 20:04:38] -rw-------. 1 boinc boinc       357 Oct 13 20:04 output.list
[2025-10-13 20:04:38] -rw-r--r--. 1 boinc boinc       620 Oct 13 20:04 runtime_log
[2025-10-13 20:04:38] -rw-------. 1 boinc boinc    993280 Oct 13 20:04 result.tar.gz
[2025-10-13 20:04:38] -rw-r--r--. 1 boinc boinc      8661 Oct 13 20:04 runtime_log.err
[2025-10-13 20:04:38] -rw-------. 1 boinc boinc       642 Oct 13 20:04 6emKDm0RHS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNNlNDmy2q7Io.diag
[2025-10-13 20:04:38] -rw-r--r--. 1 boinc boinc     21931 Oct 13 20:04 stderr.txt
[2025-10-13 20:04:38] HITS file was successfully produced:
[2025-10-13 20:04:38] -rw-------. 1 boinc boinc 190048390 Oct 13 20:02 shared/HITS.pool.root.1
[2025-10-13 20:04:38]  *** Contents of shared directory: ***
[2025-10-13 20:04:38] total 402456
[2025-10-13 20:04:38] -rw-r--r--. 2 boinc boinc 220477771 Oct 13 18:47 ATLAS.root_0
[2025-10-13 20:04:38] -rw-r--r--. 2 boinc boinc     15120 Oct 13 18:47 start_atlas.sh
[2025-10-13 20:04:38] -rw-r--r--. 2 boinc boinc    569681 Oct 13 18:47 input.tar.gz
[2025-10-13 20:04:38] -rw-------. 1 boinc boinc 190048390 Oct 13 20:02 HITS.pool.root.1
[2025-10-13 20:04:38] -rw-------. 1 boinc boinc    993280 Oct 13 20:04 result.tar.gz
20:04:40 (2828110): run_atlas exited; CPU time 24408.074506
20:04:40 (2828110): called boinc_finish(0)

</stderr_txt>
]]>

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