Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:28:16 (441): wrapper (7.7.26015): starting
22:28:16 (441): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 22:28:16] Arguments: --nthreads 12
[2025-10-12 22:28:16] Threads: 12
[2025-10-12 22:28:16] Checking for CVMFS
[2025-10-12 22:28:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 22:28:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 22:28:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 22:28:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 22:28:16] 2.11.2.0 3297 223675 94660 151645 0 59 15278780 20275201 1 130560 2 109962253 99.984 13004724 12325 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 22:28:16] CVMFS is ok
[2025-10-12 22:28:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 22:28:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 22:28:16] Further information can be found at the LHC@home message board.
[2025-10-12 22:28:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 22:28:16] Checking for apptainer binary...
[2025-10-12 22:28:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 22:28:16] Running /usr/bin/apptainer --version
[2025-10-12 22:28:16] apptainer version 1.3.2-1.el7
[2025-10-12 22:28:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 22:28:17] c-205-22.aglt2.org
[2025-10-12 22:28:17] apptainer works
[2025-10-12 22:28:17] Set ATHENA_PROC_NUMBER=12
[2025-10-12 22:28:17] Set ATHENA_CORE_NUMBER=12
[2025-10-12 22:28:17] Starting ATLAS job with PandaID=6841068851
[2025-10-12 22:28:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:42:56]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:42:56] 2025-10-13 03:42:18,835 | INFO     | transferring file log.46676269._093087.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6841068851/log.46676269._093087.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 23:42:56] 2025-10-13 03:42:18,835 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6841068851/log.46676269._093087.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._093087.job
[2025-10-12 23:42:56] 2025-10-13 03:42:18,858 | INFO     | adding to output.list: log.46676269._093087.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2f/86/log.46676269._093087.job.log.tg
[2025-10-12 23:42:56] 2025-10-13 03:42:18,859 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 23:42:56] 2025-10-13 03:42:18,859 | INFO     | summary of transferred files:
[2025-10-12 23:42:56] 2025-10-13 03:42:18,859 | INFO     |  -- lfn=log.46676269._093087.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 23:42:56] 2025-10-13 03:42:18,859 | INFO     | stage-out finished correctly
[2025-10-12 23:42:56] 2025-10-13 03:42:19,300 | INFO     | time since job start (4427s) is within the limit (172800.0s)
[2025-10-12 23:42:56] 2025-10-13 03:42:19,387 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 23:42:56] 2025-10-13 03:42:19,469 | INFO     | job 6841068851 has state=finished
[2025-10-12 23:42:56] 2025-10-13 03:42:19,469 | INFO     | preparing for final server update for job 6841068851 in state='finished'
[2025-10-12 23:42:56] 2025-10-13 03:42:19,470 | INFO     | this job has now completed (state=finished)
[2025-10-12 23:42:56] 2025-10-13 03:42:19,470 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 23:42:56] 2025-10-13 03:42:19,470 | INFO     | log transfer has been attempted: DONE
[2025-10-12 23:42:56] 2025-10-13 03:42:19,471 | INFO     | job 6841068851 has finished - writing final server update
[2025-10-12 23:42:56] 2025-10-13 03:42:19,471 | INFO     | total number of processed events: 400 (read)
[2025-10-12 23:42:56] 2025-10-13 03:42:19,472 | INFO     | executing command: lscpu
[2025-10-12 23:42:56] 2025-10-13 03:42:19,498 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 23:42:56] 2025-10-13 03:42:20,554 | WARNING  | process 11622 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 23:42:56] 2025-10-13 03:42:20,555 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6841068851/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 23:42:56] 2025-10-13 03:42:20,555 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6841068851/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 23:42:56] 2025-10-13 03:42:20,556 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-12 23:42:56] 2025-10-13 03:42:20,556 | WARNING  | maxPSS not found in memory monitor output
[2025-10-12 23:42:56] 2025-10-13 03:42:20,556 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4158712 B
[2025-10-12 23:42:56] 2025-10-13 03:42:20,557 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15544 B
[2025-10-12 23:42:56] 2025-10-13 03:42:20,557 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 23:42:56] 2025-10-13 03:42:21,305 | INFO     | time since job start (4429s) is within the limit (172800.0s)
[2025-10-12 23:42:56] 2025-10-13 03:42:23,310 | INFO     | time since job start (4431s) is within the limit (172800.0s)
[2025-10-12 23:42:56] 2025-10-13 03:42:24,175 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 23:42:56] 2025-10-13 03:42:24,183 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.6666666666667
[2025-10-12 23:42:56] 2025-10-13 03:42:24,185 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6841068851/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 23:42:56] 2025-10-13 03:42:24,186 | INFO     | extracted standard info from prmon json
[2025-10-12 23:42:56] 2025-10-13 03:42:24,186 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 23:42:56] 2025-10-13 03:42:24,186 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 23:42:56] 2025-10-13 03:42:24,187 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 23:42:56] 2025-10-13 03:42:24,187 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:42:56] 2025-10-13 03:42:24,189 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:42:56] 2025-10-13 03:42:24,189 | INFO     | sum of square deviations: 89127252.5
[2025-10-12 23:42:56] 2025-10-13 03:42:24,189 | INFO     | sum of deviations: -7013530662.499998
[2025-10-12 23:42:56] 2025-10-13 03:42:24,189 | INFO     | mean x: 1760324828.5
[2025-10-12 23:42:56] 2025-10-13 03:42:24,190 | INFO     | mean y: 2845604.803030303
[2025-10-12 23:42:56] 2025-10-13 03:42:24,190 | INFO     | -- intersect: 138524922908.2047
[2025-10-12 23:42:56] 2025-10-13 03:42:24,190 | INFO     | intersect: 138524922908.2047
[2025-10-12 23:42:56] 2025-10-13 03:42:24,190 | INFO     | chi2: 0.09958357351274555
[2025-10-12 23:42:56] 2025-10-13 03:42:24,190 | INFO     | -- intersect: 138524922908.2047
[2025-10-12 23:42:56] 2025-10-13 03:42:24,190 | INFO     | current memory leak: -78.69 B/s (using 66 data points, chi2=0.10)
[2025-10-12 23:42:56] 2025-10-13 03:42:24,191 | INFO     | could have reported an average CPU frequency of 2045 MHz (6 samples)
[2025-10-12 23:42:56] 2025-10-13 03:42:24,191 | INFO     | ..............................
[2025-10-12 23:42:56] 2025-10-13 03:42:24,191 | INFO     | . Timing measurements:
[2025-10-12 23:42:56] 2025-10-13 03:42:24,191 | INFO     | . get job = 0 s
[2025-10-12 23:42:56] 2025-10-13 03:42:24,191 | INFO     | . initial setup = 2 s
[2025-10-12 23:42:56] 2025-10-13 03:42:24,191 | INFO     | . payload setup = 7 s
[2025-10-12 23:42:56] 2025-10-13 03:42:24,192 | INFO     | sufficient remaining disk space (29353836544 B)
[2025-10-12 23:42:56] 2025-10-13 03:42:24,192 | INFO     | . stage-in = 0 s
[2025-10-12 23:42:56] 2025-10-13 03:42:24,192 | INFO     | . payload execution = 4398 s
[2025-10-12 23:42:56] 2025-10-13 03:42:24,192 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-12 23:42:56] 2025-10-13 03:42:24,192 | INFO     | . stage-out = 0 s
[2025-10-12 23:42:56] 2025-10-13 03:42:24,193 | INFO     | . log creation = 0 s
[2025-10-12 23:42:56] 2025-10-13 03:42:24,193 | INFO     | ..............................
[2025-10-12 23:42:56] 2025-10-13 03:42:24,276 | INFO     | 
[2025-10-12 23:42:56] 2025-10-13 03:42:24,276 | INFO     | job summary report
[2025-10-12 23:42:56] 2025-10-13 03:42:24,276 | INFO     | --------------------------------------------------
[2025-10-12 23:42:56] 2025-10-13 03:42:24,276 | INFO     | PanDA job id: 6841068851
[2025-10-12 23:42:56] 2025-10-13 03:42:24,276 | INFO     | task id: 46676269
[2025-10-12 23:42:56] 2025-10-13 03:42:24,277 | INFO     | errors: (none)
[2025-10-12 23:42:56] 2025-10-13 03:42:24,277 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:42:56] 2025-10-13 03:42:24,277 | INFO     | pilot state: finished 
[2025-10-12 23:42:56] 2025-10-13 03:42:24,277 | INFO     | transexitcode: 0
[2025-10-12 23:42:56] 2025-10-13 03:42:24,277 | INFO     | exeerrorcode: 0
[2025-10-12 23:42:56] 2025-10-13 03:42:24,277 | INFO     | exeerrordiag: 
[2025-10-12 23:42:56] 2025-10-13 03:42:24,277 | INFO     | exitcode: 0
[2025-10-12 23:42:56] 2025-10-13 03:42:24,278 | INFO     | exitmsg: OK
[2025-10-12 23:42:56] 2025-10-13 03:42:24,278 | INFO     | cpuconsumptiontime: 46956 s
[2025-10-12 23:42:56] 2025-10-13 03:42:24,278 | INFO     | nevents: 400
[2025-10-12 23:42:56] 2025-10-13 03:42:24,278 | INFO     | neventsw: 0
[2025-10-12 23:42:56] 2025-10-13 03:42:24,278 | INFO     | pid: 11622
[2025-10-12 23:42:56] 2025-10-13 03:42:24,278 | INFO     | pgrp: 11622
[2025-10-12 23:42:56] 2025-10-13 03:42:24,278 | INFO     | corecount: 12
[2025-10-12 23:42:56] 2025-10-13 03:42:24,278 | INFO     | event service: False
[2025-10-12 23:42:56] 2025-10-13 03:42:24,279 | INFO     | sizes: {0: 2348686, 1: 2348885, 6: 2349147, 11: 2349175, 4409: 2375224, 4410: 2384222, 4411: 2384406, 4415: 2384600}
[2025-10-12 23:42:56] 2025-10-13 03:42:24,279 | INFO     | --------------------------------------------------
[2025-10-12 23:42:56] 2025-10-13 03:42:24,279 | INFO     | 
[2025-10-12 23:42:56] 2025-10-13 03:42:24,279 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 23:42:56] 2025-10-13 03:42:24,283 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6841068851: 4456612 B (within 2537553920 B limit)
[2025-10-12 23:42:56] 2025-10-13 03:42:24,284 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6841068851/HITS.46676269._093087.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-12 23:42:56] 2025-10-13 03:42:24,284 | INFO     | total size of present files: 0 B (workdir size: 4456612 B)
[2025-10-12 23:42:56] 2025-10-13 03:42:24,284 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6841068851/HITS.46676269._093087.pool.root.1 since it does not exist
[2025-10-12 23:42:56] 2025-10-13 03:42:24,303 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:42:56] 2025-10-13 03:42:24,303 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:42:56] 2025-10-13 03:42:24,304 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:42:56] 2025-10-13 03:42:24,304 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:42:56] 2025-10-13 03:42:24,304 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:42:56] 2025-10-13 03:42:24,304 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:42:56] 2025-10-13 03:42:24,304 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:42:56] 2025-10-13 03:42:24,305 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:42:56] 2025-10-13 03:42:24,305 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:42:56] 2025-10-13 03:42:24,305 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:42:56] 2025-10-13 03:42:24,305 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:42:56] 2025-10-13 03:42:24,305 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:42:56] 2025-10-13 03:42:24,305 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:42:56] 2025-10-13 03:42:24,306 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:42:56] 2025-10-13 03:42:24,306 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:42:56] 2025-10-13 03:42:24,306 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:42:56] 2025-10-13 03:42:24,306 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:42:56] 2025-10-13 03:42:24,307 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:42:56] 2025-10-13 03:42:24,307 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:42:56] 2025-10-13 03:42:24,307 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:42:56] 2025-10-13 03:42:24,307 | INFO     | job 6841068851 has completed (purged errors)
[2025-10-12 23:42:56] 2025-10-13 03:42:24,307 | INFO     | overall cleanup function is called
[2025-10-12 23:42:56] 2025-10-13 03:42:24,384 | INFO     | number of running child processes to parent process 11622: 1
[2025-10-12 23:42:56] 2025-10-13 03:42:24,384 | INFO     | maximum number of monitored processes: 6
[2025-10-12 23:42:56] 2025-10-13 03:42:24,384 | INFO     | aborting job monitoring since job object (job id=6841068851) has expired
[2025-10-12 23:42:56] 2025-10-13 03:42:25,314 | INFO     | --- collectZombieJob: --- 10, [11622]
[2025-10-12 23:42:56] 2025-10-13 03:42:25,314 | INFO     | zombie collector waiting for pid 11622
[2025-10-12 23:42:56] 2025-10-13 03:42:25,314 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:42:56] 2025-10-13 03:42:25,314 | INFO     | collected zombie processes
[2025-10-12 23:42:56] 2025-10-13 03:42:25,314 | INFO     | will attempt to kill all subprocesses of pid=11622
[2025-10-12 23:42:56] 2025-10-13 03:42:25,400 | INFO     | process IDs to be killed: [11622] (in reverse order)
[2025-10-12 23:42:56] 2025-10-13 03:42:25,451 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:42:56] 2025-10-13 03:42:25,451 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:42:56] 2025-10-13 03:42:25,454 | INFO     | did not find any defunct processes belonging to 11622
[2025-10-12 23:42:56] 2025-10-13 03:42:25,456 | INFO     | did not find any defunct processes belonging to 11622
[2025-10-12 23:42:56] 2025-10-13 03:42:25,456 | INFO     | ready for new job
[2025-10-12 23:42:56] 2025-10-13 03:42:25,457 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:42:56] 2025-10-13 03:42:25,458 | INFO     | ***************************************
[2025-10-12 23:42:56] 2025-10-13 03:42:25,458 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:42:56] 2025-10-13 03:42:25,458 | INFO     | ***************************************
[2025-10-12 23:42:56] 2025-10-13 03:42:25,458 | INFO     | 
[2025-10-12 23:42:56] 2025-10-13 03:42:25,458 | INFO     | architecture information:
[2025-10-12 23:42:56] 2025-10-13 03:42:25,459 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:42:56] 2025-10-13 03:42:25,474 | INFO     | cat /etc/os-release:
[2025-10-12 23:42:56] NAME="CentOS Linux"
[2025-10-12 23:42:56] VERSION="7 (Core)"
[2025-10-12 23:42:56] ID="centos"
[2025-10-12 23:42:56] ID_LIKE="rhel fedora"
[2025-10-12 23:42:56] VERSION_ID="7"
[2025-10-12 23:42:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:42:56] ANSI_COLOR="0;31"
[2025-10-12 23:42:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:42:56] HOME_URL="https://www.centos.org/"
[2025-10-12 23:42:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:42:56] 
[2025-10-12 23:42:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:42:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:42:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:42:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:42:56] 
[2025-10-12 23:42:56] 2025-10-13 03:42:25,474 | INFO     | ***************************************
[2025-10-12 23:42:56] 2025-10-13 03:42:25,977 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 23:42:56] 2025-10-13 03:42:25,993 | INFO     | sufficient remaining disk space (29359079424 B)
[2025-10-12 23:42:56] 2025-10-13 03:42:25,993 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:42:56] 2025-10-13 03:42:25,993 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:42:56] 2025-10-13 03:42:25,993 | INFO     | update_server=False
[2025-10-12 23:42:56] 2025-10-13 03:42:25,994 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:42:56] 2025-10-13 03:42:25,994 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:42:56] 2025-10-13 03:42:25,994 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:42:56] 2025-10-13 03:42:25,994 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:42:56] 2025-10-13 03:42:25,995 | INFO     | aborting loop
[2025-10-12 23:42:56] 2025-10-13 03:42:26,053 | INFO     | all data control threads have been joined
[2025-10-12 23:42:56] 2025-10-13 03:42:26,111 | INFO     | all job control threads have been joined
[2025-10-12 23:42:56] 2025-10-13 03:42:26,389 | INFO     | all payload control threads have been joined
[2025-10-12 23:42:56] 2025-10-13 03:42:26,960 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:42:56] 2025-10-13 03:42:26,996 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:42:56] 2025-10-13 03:42:26,999 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:42:56] 2025-10-13 03:42:27,000 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:42:56] 2025-10-13 03:42:27,030 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:42:56] 2025-10-13 03:42:27,059 | INFO     | [data] control thread has finished
[2025-10-12 23:42:56] 2025-10-13 03:42:27,116 | INFO     | [job] control thread has finished
[2025-10-12 23:42:56] 2025-10-13 03:42:27,253 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:42:56] 2025-10-13 03:42:27,394 | INFO     | [payload] control thread has finished
[2025-10-12 23:42:56] 2025-10-13 03:42:27,544 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:42:56] 2025-10-13 03:42:27,784 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:42:56] 2025-10-13 03:42:28,018 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:42:56] 2025-10-13 03:42:28,055 | INFO     | [job] validate thread has finished
[2025-10-12 23:42:56] 2025-10-13 03:42:28,413 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:42:56] 2025-10-13 03:42:28,488 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:42:56] 2025-10-13 03:42:28,966 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:42:56] 2025-10-13 03:42:30,000 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:42:56] 2025-10-13 03:42:39,471 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:42:56] 2025-10-13 03:42:39,841 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140119919478592)>', '<ExcThread(monitor, started 140119315035904)>']
[2025-10-12 23:42:56] 2025-10-13 03:42:44,854 | INFO     | all workflow threads have been joined
[2025-10-12 23:42:56] 2025-10-13 03:42:44,859 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:42:56] 2025-10-13 03:42:44,860 | INFO     | traces error code: 0
[2025-10-12 23:42:56] 2025-10-13 03:42:44,860 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:42:56] 2025-10-13 03:42:56,502 | INFO     | PID=4769 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 23:42:56] 2025-10-13 03:42:56,502 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:42:56] 2025-10-13 03:42:56,502 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:42:56] 2025-10-13 03:42:56,503 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:42:56] 2025-10-13 03:42:56,503 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:42:56] 2025-10-13 03:42:56,503 | INFO     | [monitor] control thread has ended
[2025-10-12 23:42:56] 2025-10-13 03:42:56,586 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:42:56] 2025-10-13 03:42:56,590 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:42:56] 2025-10-13 03:42:56,593 [wrapper] pilotpid: 4769
[2025-10-12 23:42:56] 2025-10-13 03:42:56,597 [wrapper] Pilot exit status: 0
[2025-10-12 23:42:56] 2025-10-13 03:42:56,612 [wrapper] pandaids: 6841068851
[2025-10-12 23:42:56] 2025-10-13 03:42:56,653 [wrapper] cleanup supervisor_pilot 20882 4770
[2025-10-12 23:42:56] 2025-10-13 03:42:56,657 [wrapper] Test setup, not cleaning
[2025-10-12 23:42:56] 2025-10-13 03:42:56,661 [wrapper] apfmon messages muted
[2025-10-12 23:42:56] 2025-10-13 03:42:56,665 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:42:56] 2025-10-13 03:42:56,669 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:42:56]  *** Error codes and diagnostics ***
[2025-10-12 23:42:56]     "exeErrorCode": 0,
[2025-10-12 23:42:56]     "exeErrorDiag": "",
[2025-10-12 23:42:56]     "pilotErrorCode": 0,
[2025-10-12 23:42:56]     "pilotErrorDiag": "",
[2025-10-12 23:42:56]  *** Listing of results directory ***
[2025-10-12 23:42:56] total 414588
[2025-10-12 23:42:56] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 20:11 pilot3.tar.gz
[2025-10-12 23:42:56] -rwx------ 1 boincer umatlas     36292 Oct 12 20:21 runpilot2-wrapper.sh
[2025-10-12 23:42:56] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 20:21 queuedata.json
[2025-10-12 23:42:56] -rw-r--r-- 1 boincer umatlas       100 Oct 12 22:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:42:56] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 22:28 run_atlas
[2025-10-12 23:42:56] -rw-r--r-- 1 boincer umatlas       105 Oct 12 22:28 job.xml
[2025-10-12 23:42:56] -rw-r--r-- 2 boincer umatlas 222076128 Oct 12 22:28 EVNT.46676267._004690.pool.root.1
[2025-10-12 23:42:56] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 22:28 start_atlas.sh
[2025-10-12 23:42:56] drwxrwx--x 2 boincer umatlas      4096 Oct 12 22:28 shared
[2025-10-12 23:42:56] -rw-r--r-- 2 boincer umatlas    569676 Oct 12 22:28 input.tar.gz
[2025-10-12 23:42:56] -rw-r--r-- 1 boincer umatlas         0 Oct 12 22:28 boinc_lockfile
[2025-10-12 23:42:56] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 22:28 pandaJob.out
[2025-10-12 23:42:56] -rw------- 1 boincer umatlas    974373 Oct 12 22:28 agis_schedconf.cvmfs.json
[2025-10-12 23:42:56] -rw------- 1 boincer umatlas   1560580 Oct 12 22:28 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:42:56] drwx------ 5 boincer umatlas      4096 Oct 12 22:28 pilot3
[2025-10-12 23:42:56] -rw-r--r-- 1 boincer umatlas      5953 Oct 12 23:37 init_data.xml
[2025-10-12 23:42:56] -rw------- 1 boincer umatlas 196514358 Oct 12 23:41 HITS.46676269._093087.pool.root.1
[2025-10-12 23:42:56] -rw-r--r-- 1 boincer umatlas       530 Oct 12 23:41 boinc_task_state.xml
[2025-10-12 23:42:56] -rw------- 1 boincer umatlas      1050 Oct 12 23:42 memory_monitor_summary.json
[2025-10-12 23:42:56] -rw------- 1 boincer umatlas    381638 Oct 12 23:42 log.46676269._093087.job.log.tgz.1
[2025-10-12 23:42:56] -rw------- 1 boincer umatlas      7856 Oct 12 23:42 heartbeat.json
[2025-10-12 23:42:56] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 23:42 boinc_mmap_file
[2025-10-12 23:42:56] -rw-r--r-- 1 boincer umatlas        27 Oct 12 23:42 wrapper_checkpoint.txt
[2025-10-12 23:42:56] -rw------- 1 boincer umatlas        95 Oct 12 23:42 pilot_heartbeat.json
[2025-10-12 23:42:56] -rw------- 1 boincer umatlas       744 Oct 12 23:42 pilotlog.txt
[2025-10-12 23:42:56] -rw------- 1 boincer umatlas    643660 Oct 12 23:42 log.46676269._093087.job.log.1
[2025-10-12 23:42:56] -rw------- 1 boincer umatlas       357 Oct 12 23:42 output.list
[2025-10-12 23:42:56] -rw-r--r-- 1 boincer umatlas       620 Oct 12 23:42 runtime_log
[2025-10-12 23:42:56] -rw------- 1 boincer umatlas   1044480 Oct 12 23:42 result.tar.gz
[2025-10-12 23:42:56] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 23:42 runtime_log.err
[2025-10-12 23:42:56] -rw------- 1 boincer umatlas       659 Oct 12 23:42 PtoNDmvULS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmCNVMDm92A42n.diag
[2025-10-12 23:42:56] -rw-r--r-- 1 boincer umatlas     22736 Oct 12 23:42 stderr.txt
[2025-10-12 23:42:56] HITS file was successfully produced:
[2025-10-12 23:42:56] -rw------- 1 boincer umatlas 196514358 Oct 12 23:41 shared/HITS.pool.root.1
[2025-10-12 23:42:56]  *** Contents of shared directory: ***
[2025-10-12 23:42:56] total 410384
[2025-10-12 23:42:56] -rw-r--r-- 2 boincer umatlas 222076128 Oct 12 22:28 ATLAS.root_0
[2025-10-12 23:42:56] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 22:28 start_atlas.sh
[2025-10-12 23:42:56] -rw-r--r-- 2 boincer umatlas    569676 Oct 12 22:28 input.tar.gz
[2025-10-12 23:42:56] -rw------- 1 boincer umatlas 196514358 Oct 12 23:41 HITS.pool.root.1
[2025-10-12 23:42:56] -rw------- 1 boincer umatlas   1044480 Oct 12 23:42 result.tar.gz
23:42:58 (441): run_atlas exited; CPU time 46924.476364
23:42:58 (441): called boinc_finish(0)

</stderr_txt>
]]>

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