Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:12 (1112777): wrapper (7.7.26015): starting
00:01:12 (1112777): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 00:01:12] Arguments: --nthreads 12
[2025-10-13 00:01:12] Threads: 12
[2025-10-13 00:01:12] Checking for CVMFS
[2025-10-13 00:01:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:01:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:01:15] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:01:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:01:16] 2.13.2.0 128745 116909 144824 151647 1 26 20251260 39288832 9911 16776704 0 65954848 99.778 42094996 35887 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 00:01:16] CVMFS is ok
[2025-10-13 00:01:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:01:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:01:16] Further information can be found at the LHC@home message board.
[2025-10-13 00:01:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:01:16] Checking for apptainer binary...
[2025-10-13 00:01:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:01:16] Running /usr/bin/apptainer --version
[2025-10-13 00:01:17] apptainer version 1.4.3-1.el9
[2025-10-13 00:01:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:01:19] c-211-4.aglt2.org
[2025-10-13 00:01:19] apptainer works
[2025-10-13 00:01:19] Set ATHENA_PROC_NUMBER=12
[2025-10-13 00:01:19] Set ATHENA_CORE_NUMBER=12
[2025-10-13 00:01:19] Starting ATLAS job with PandaID=6840834756
[2025-10-13 00:01:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 10:31:23]  *** The last 200 lines of the pilot log: ***
[2025-10-13 10:31:23] 2025-10-13 14:29:46,352 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 10:31:23] 2025-10-13 14:29:46,522 | INFO     | fitting pss+swap vs Time
[2025-10-13 10:31:23] 2025-10-13 14:29:46,579 | INFO     | sum of square deviations: 71077147411.66028
[2025-10-13 10:31:23] 2025-10-13 14:29:46,688 | INFO     | sum of deviations: 475491731029.6534
[2025-10-13 10:31:23] 2025-10-13 14:29:46,688 | INFO     | mean x: 1760347086.2810457
[2025-10-13 10:31:23] 2025-10-13 14:29:46,688 | INFO     | mean y: 2610846.22875817
[2025-10-13 10:31:23] 2025-10-13 14:29:46,689 | INFO     | -- intersect: -11773754888.047535
[2025-10-13 10:31:23] 2025-10-13 14:29:46,689 | INFO     | intersect: -11773754888.047535
[2025-10-13 10:31:23] 2025-10-13 14:29:46,694 | INFO     | chi2: 7.990360874768955
[2025-10-13 10:31:23] 2025-10-13 14:29:46,695 | INFO     | sum of square deviations: 69349764317.67062
[2025-10-13 10:31:23] 2025-10-13 14:29:46,713 | INFO     | sum of deviations: 557790754453.7913
[2025-10-13 10:31:23] 2025-10-13 14:29:46,714 | INFO     | mean x: 1760346933.803954
[2025-10-13 10:31:23] 2025-10-13 14:29:46,714 | INFO     | mean y: 2618072.6705107084
[2025-10-13 10:31:23] 2025-10-13 14:29:46,714 | INFO     | -- intersect: -14156121383.30096
[2025-10-13 10:31:23] 2025-10-13 14:29:46,714 | INFO     | intersect: -14156121383.30096
[2025-10-13 10:31:23] 2025-10-13 14:29:46,719 | INFO     | chi2: 6.461131678121677
[2025-10-13 10:31:23] 2025-10-13 14:29:46,720 | INFO     | current chi2=6.461131678121677 (change=19.138424667102367 %)
[2025-10-13 10:31:23] 2025-10-13 14:29:46,720 | INFO     | right removable region: 606
[2025-10-13 10:31:23] 2025-10-13 14:29:46,721 | INFO     | sum of square deviations: 69348726097.67065
[2025-10-13 10:31:23] 2025-10-13 14:29:46,741 | INFO     | sum of deviations: 263111200559.73672
[2025-10-13 10:31:23] 2025-10-13 14:29:46,742 | INFO     | mean x: 1760347238.803954
[2025-10-13 10:31:23] 2025-10-13 14:29:46,742 | INFO     | mean y: 2629578.4431630974
[2025-10-13 10:31:23] 2025-10-13 14:29:46,743 | INFO     | -- intersect: -6676182008.541174
[2025-10-13 10:31:23] 2025-10-13 14:29:46,743 | INFO     | intersect: -6676182008.541174
[2025-10-13 10:31:23] 2025-10-13 14:29:46,744 | INFO     | chi2: 3.996636346920317
[2025-10-13 10:31:23] 2025-10-13 14:29:46,744 | INFO     | current chi2=3.996636346920317 (change=49.981779176702304 %)
[2025-10-13 10:31:23] 2025-10-13 14:29:46,745 | INFO     | sum of square deviations: 67648685997.12435
[2025-10-13 10:31:23] 2025-10-13 14:29:46,757 | INFO     | sum of deviations: 121135469647.53793
[2025-10-13 10:31:23] 2025-10-13 14:29:46,757 | INFO     | mean x: 1760347391.3205981
[2025-10-13 10:31:23] 2025-10-13 14:29:46,758 | INFO     | mean y: 2642307.504983389
[2025-10-13 10:31:23] 2025-10-13 14:29:46,758 | INFO     | -- intersect: -3149532858.16643
[2025-10-13 10:31:23] 2025-10-13 14:29:46,758 | INFO     | intersect: -3149532858.16643
[2025-10-13 10:31:23] 2025-10-13 14:29:46,759 | INFO     | chi2: 2.2747167741738346
[2025-10-13 10:31:23] 2025-10-13 14:29:46,759 | INFO     | current chi2=2.2747167741738346 (change=43.084219410488515 %)
[2025-10-13 10:31:23] 2025-10-13 14:29:46,760 | INFO     | sum of square deviations: 65976683629.91317
[2025-10-13 10:31:23] 2025-10-13 14:29:46,771 | INFO     | sum of deviations: 49759694001.76547
[2025-10-13 10:31:23] 2025-10-13 14:29:46,771 | INFO     | mean x: 1760347543.835846
[2025-10-13 10:31:23] 2025-10-13 14:29:46,771 | INFO     | mean y: 2648815.711892797
[2025-10-13 10:31:23] 2025-10-13 14:29:46,771 | INFO     | -- intersect: -1325007415.2284074
[2025-10-13 10:31:23] 2025-10-13 14:29:46,771 | INFO     | intersect: -1325007415.2284074
[2025-10-13 10:31:23] 2025-10-13 14:29:46,772 | INFO     | chi2: 1.8602679944518328
[2025-10-13 10:31:23] 2025-10-13 14:29:46,772 | INFO     | current chi2=1.8602679944518328 (change=18.21979705022958 %)
[2025-10-13 10:31:23] 2025-10-13 14:29:46,772 | INFO     | left removable region: 30
[2025-10-13 10:31:23] 2025-10-13 14:29:46,773 | INFO     | sum of square deviations: 59256446863.97211
[2025-10-13 10:31:23] 2025-10-13 14:29:46,783 | INFO     | sum of deviations: 55149319815.937515
[2025-10-13 10:31:23] 2025-10-13 14:29:46,783 | INFO     | mean x: 1760347818.3819444
[2025-10-13 10:31:23] 2025-10-13 14:29:46,783 | INFO     | mean y: 2663919.359375
[2025-10-13 10:31:23] 2025-10-13 14:29:46,783 | INFO     | -- intersect: -1635672328.6119752
[2025-10-13 10:31:23] 2025-10-13 14:29:46,784 | INFO     | intersect: -1635672328.6119752
[2025-10-13 10:31:23] 2025-10-13 14:29:46,785 | INFO     | chi2: 0.009208062946795504
[2025-10-13 10:31:23] 2025-10-13 14:29:46,785 | INFO     | -- intersect: -1635672328.6119752
[2025-10-13 10:31:23] 2025-10-13 14:29:46,785 | INFO     | current memory leak: 0.93 B/s (using 576 data points, chi2=0.01)
[2025-10-13 10:31:23] 2025-10-13 14:29:46,786 | INFO     | could have reported an average CPU frequency of 2599 MHz (24 samples)
[2025-10-13 10:31:23] 2025-10-13 14:29:46,787 | INFO     | ..............................
[2025-10-13 10:31:23] 2025-10-13 14:29:46,787 | INFO     | . Timing measurements:
[2025-10-13 10:31:23] 2025-10-13 14:29:46,787 | INFO     | . get job = 0 s
[2025-10-13 10:31:23] 2025-10-13 14:29:46,787 | INFO     | . initial setup = 15 s
[2025-10-13 10:31:23] 2025-10-13 14:29:46,787 | INFO     | . payload setup = 76 s
[2025-10-13 10:31:23] 2025-10-13 14:29:46,787 | INFO     | . stage-in = 1 s
[2025-10-13 10:31:23] 2025-10-13 14:29:46,787 | INFO     | . payload execution = 37347 s
[2025-10-13 10:31:23] 2025-10-13 14:29:46,787 | INFO     | . stage-out = 7 s
[2025-10-13 10:31:23] 2025-10-13 14:29:46,788 | INFO     | . log creation = 1 s
[2025-10-13 10:31:23] 2025-10-13 14:29:46,788 | INFO     | ..............................
[2025-10-13 10:31:23] 2025-10-13 14:29:47,083 | INFO     | 
[2025-10-13 10:31:23] 2025-10-13 14:29:47,084 | INFO     | job summary report
[2025-10-13 10:31:23] 2025-10-13 14:29:47,084 | INFO     | --------------------------------------------------
[2025-10-13 10:31:23] 2025-10-13 14:29:47,084 | INFO     | PanDA job id: 6840834756
[2025-10-13 10:31:23] 2025-10-13 14:29:47,085 | INFO     | task id: 46676269
[2025-10-13 10:31:23] 2025-10-13 14:29:47,085 | INFO     | errors: (none)
[2025-10-13 10:31:23] 2025-10-13 14:29:47,085 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 10:31:23] 2025-10-13 14:29:47,085 | INFO     | pilot state: finished 
[2025-10-13 10:31:23] 2025-10-13 14:29:47,085 | INFO     | transexitcode: 0
[2025-10-13 10:31:23] 2025-10-13 14:29:47,085 | INFO     | exeerrorcode: 0
[2025-10-13 10:31:23] 2025-10-13 14:29:47,085 | INFO     | exeerrordiag: 
[2025-10-13 10:31:23] 2025-10-13 14:29:47,085 | INFO     | exitcode: 0
[2025-10-13 10:31:23] 2025-10-13 14:29:47,086 | INFO     | exitmsg: OK
[2025-10-13 10:31:23] 2025-10-13 14:29:47,086 | INFO     | cpuconsumptiontime: 50283 s
[2025-10-13 10:31:23] 2025-10-13 14:29:47,086 | INFO     | nevents: 400
[2025-10-13 10:31:23] 2025-10-13 14:29:47,086 | INFO     | neventsw: 0
[2025-10-13 10:31:23] 2025-10-13 14:29:47,086 | INFO     | pid: 1126700
[2025-10-13 10:31:23] 2025-10-13 14:29:47,086 | INFO     | pgrp: 1126700
[2025-10-13 10:31:23] 2025-10-13 14:29:47,086 | INFO     | corecount: 12
[2025-10-13 10:31:23] 2025-10-13 14:29:47,086 | INFO     | event service: False
[2025-10-13 10:31:23] 2025-10-13 14:29:47,087 | INFO     | sizes: {0: 2348686, 1: 2348686, 3: 2348885, 4: 2348913, 6: 2348941, 17: 2348969, 29: 2349125, 42: 2349153, 53: 2349499, 37428: 2390109, 37429: 2390108, 37436: 2399
[2025-10-13 10:31:23] 2025-10-13 14:29:47,087 | INFO     | --------------------------------------------------
[2025-10-13 10:31:23] 2025-10-13 14:29:47,087 | INFO     | 
[2025-10-13 10:31:23] 2025-10-13 14:29:47,087 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 10:31:23] 2025-10-13 14:29:47,252 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 10:31:23] 2025-10-13 14:29:47,253 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 10:31:23] 2025-10-13 14:29:47,253 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 10:31:23] 2025-10-13 14:29:47,253 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 10:31:23] 2025-10-13 14:29:47,253 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 10:31:23] 2025-10-13 14:29:47,254 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 10:31:23] 2025-10-13 14:29:47,254 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 10:31:23] 2025-10-13 14:29:47,254 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 10:31:23] 2025-10-13 14:29:47,254 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 10:31:23] 2025-10-13 14:29:47,254 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 10:31:23] 2025-10-13 14:29:47,254 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 10:31:23] 2025-10-13 14:29:47,255 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 10:31:23] 2025-10-13 14:29:47,255 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 10:31:23] 2025-10-13 14:29:47,255 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 10:31:23] 2025-10-13 14:29:47,255 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 10:31:23] 2025-10-13 14:29:47,255 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 10:31:23] 2025-10-13 14:29:47,255 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 10:31:23] 2025-10-13 14:29:47,255 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 10:31:23] 2025-10-13 14:29:47,285 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 10:31:23] 2025-10-13 14:29:47,286 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 10:31:23] 2025-10-13 14:29:47,286 | INFO     | job 6840834756 has completed (purged errors)
[2025-10-13 10:31:23] 2025-10-13 14:29:47,286 | INFO     | overall cleanup function is called
[2025-10-13 10:31:23] 2025-10-13 14:29:48,296 | INFO     | --- collectZombieJob: --- 10, [1126700]
[2025-10-13 10:31:23] 2025-10-13 14:29:48,298 | INFO     | zombie collector waiting for pid 1126700
[2025-10-13 10:31:23] 2025-10-13 14:29:48,298 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 10:31:23] 2025-10-13 14:29:48,298 | INFO     | collected zombie processes
[2025-10-13 10:31:23] 2025-10-13 14:29:48,298 | INFO     | will attempt to kill all subprocesses of pid=1126700
[2025-10-13 10:31:23] 2025-10-13 14:29:48,981 | INFO     | process IDs to be killed: [1126700] (in reverse order)
[2025-10-13 10:31:23] 2025-10-13 14:29:49,317 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 10:31:23] 2025-10-13 14:29:49,317 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 10:31:23] 2025-10-13 14:29:49,334 | INFO     | did not find any defunct processes belonging to 1126700
[2025-10-13 10:31:23] 2025-10-13 14:29:49,410 | INFO     | did not find any defunct processes belonging to 1126700
[2025-10-13 10:31:23] 2025-10-13 14:29:49,410 | INFO     | ready for new job
[2025-10-13 10:31:23] 2025-10-13 14:29:49,410 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 10:31:23] 2025-10-13 14:29:49,430 | INFO     | ***************************************
[2025-10-13 10:31:23] 2025-10-13 14:29:49,430 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 10:31:23] 2025-10-13 14:29:49,430 | INFO     | ***************************************
[2025-10-13 10:31:23] 2025-10-13 14:29:49,430 | INFO     | 
[2025-10-13 10:31:23] 2025-10-13 14:29:49,433 | INFO     | architecture information:
[2025-10-13 10:31:23] 2025-10-13 14:29:49,437 | INFO     | executing command: cat /etc/os-release
[2025-10-13 10:31:23] 2025-10-13 14:29:49,568 | INFO     | cat /etc/os-release:
[2025-10-13 10:31:23] NAME="CentOS Linux"
[2025-10-13 10:31:23] VERSION="7 (Core)"
[2025-10-13 10:31:23] ID="centos"
[2025-10-13 10:31:23] ID_LIKE="rhel fedora"
[2025-10-13 10:31:23] VERSION_ID="7"
[2025-10-13 10:31:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 10:31:23] ANSI_COLOR="0;31"
[2025-10-13 10:31:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 10:31:23] HOME_URL="https://www.centos.org/"
[2025-10-13 10:31:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 10:31:23] 
[2025-10-13 10:31:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 10:31:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 10:31:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 10:31:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 10:31:23] 
[2025-10-13 10:31:23] 2025-10-13 14:29:49,569 | INFO     | ***************************************
[2025-10-13 10:31:23] 2025-10-13 14:29:50,072 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 10:31:23] 2025-10-13 14:29:50,276 | INFO     | sufficient remaining disk space (52589232128 B)
[2025-10-13 10:31:23] 2025-10-13 14:29:50,277 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 10:31:23] 2025-10-13 14:29:50,277 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 10:31:23] 2025-10-13 14:29:50,277 | INFO     | update_server=False
[2025-10-13 10:31:23] 2025-10-13 14:29:50,277 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 10:31:23] 2025-10-13 14:29:50,543 | INFO     | all payload control threads have been joined
[2025-10-13 10:31:23] 2025-10-13 14:29:50,663 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 10:31:23] 2025-10-13 14:29:50,663 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 10:31:23] 2025-10-13 14:29:50,663 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:31:23] 2025-10-13 14:29:50,663 | INFO     | will abort loop
[2025-10-13 10:31:23] 2025-10-13 14:29:51,255 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 10:31:23] 2025-10-13 14:29:51,283 | INFO     | [job] retrieve thread has finished
[2025-10-13 10:31:23] 2025-10-13 14:29:51,290 | INFO     | all data control threads have been joined
[2025-10-13 10:31:23] 2025-10-13 14:29:51,447 | INFO     | all job control threads have been joined
[2025-10-13 10:31:23] 2025-10-13 14:29:51,549 | INFO     | [payload] control thread has finished
[2025-10-13 10:31:23] 2025-10-13 14:29:51,670 | INFO     | [job] job monitor thread has finished
[2025-10-13 10:31:23] 2025-10-13 14:29:51,751 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 10:31:23] 2025-10-13 14:29:51,761 | INFO     | [data] copytool_in thread has finished
[2025-10-13 10:31:23] 2025-10-13 14:29:51,762 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 10:31:23] 2025-10-13 14:29:51,766 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 10:31:23] 2025-10-13 14:29:51,767 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 10:31:23] 2025-10-13 14:29:51,837 | INFO     | [payload] failed_post thread has finished
[2025-10-13 10:31:23] 2025-10-13 14:29:52,146 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:31:23] 2025-10-13 14:29:52,228 | INFO     | [job] validate thread has finished
[2025-10-13 10:31:23] 2025-10-13 14:29:52,251 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 10:31:23] 2025-10-13 14:29:52,296 | INFO     | [data] control thread has finished
[2025-10-13 10:31:23] 2025-10-13 14:29:52,452 | INFO     | [job] control thread has finished
[2025-10-13 10:31:23] 2025-10-13 14:29:52,639 | INFO     | [payload] validate_post thread has finished
[2025-10-13 10:31:23] 2025-10-13 14:29:53,152 | INFO     | [job] queue monitor thread has finished
[2025-10-13 10:31:23] 2025-10-13 14:29:53,262 | INFO     | [data] copytool_out thread has finished
[2025-10-13 10:31:23] 2025-10-13 14:29:56,260 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 10:31:23] 2025-10-13 14:30:22,042 | INFO     | PID=1118163 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 10:31:23] 2025-10-13 14:30:22,042 | INFO     | .. there are 8 such processes running
[2025-10-13 10:31:23] 2025-10-13 14:30:22,073 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 10:31:23] 2025-10-13 14:30:22,073 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 10:31:23] 2025-10-13 14:30:22,073 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 10:31:23] 2025-10-13 14:30:50,325 | INFO     | [monitor] cgroup control has ended
[2025-10-13 10:31:23] 2025-10-13 14:30:51,962 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140687767197504)>', '<ExcThread(monitor, started 140686754051840)>']
[2025-10-13 10:31:23] 2025-10-13 14:30:52,263 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 10:31:23] 2025-10-13 14:30:52,263 | INFO     | [monitor] control thread has ended
[2025-10-13 10:31:23] 2025-10-13 14:30:56,988 | INFO     | all workflow threads have been joined
[2025-10-13 10:31:23] 2025-10-13 14:30:56,988 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 10:31:23] 2025-10-13 14:30:57,019 | INFO     | traces error code: 0
[2025-10-13 10:31:23] 2025-10-13 14:30:57,020 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 10:31:23] 2025-10-13 14:30:57,925 [wrapper] ==== pilot stdout END ====
[2025-10-13 10:31:23] 2025-10-13 14:30:57,929 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 10:31:23] 2025-10-13 14:30:57,933 [wrapper] pilotpid: 1118163
[2025-10-13 10:31:23] 2025-10-13 14:30:57,938 [wrapper] Pilot exit status: 0
[2025-10-13 10:31:23] 2025-10-13 14:30:58,087 [wrapper] pandaids: 6840834756
[2025-10-13 10:31:23] 2025-10-13 14:30:58,443 [wrapper] cleanup supervisor_pilot 2015838 1118164
[2025-10-13 10:31:23] 2025-10-13 14:30:58,448 [wrapper] Test setup, not cleaning
[2025-10-13 10:31:23] 2025-10-13 14:30:58,453 [wrapper] apfmon messages muted
[2025-10-13 10:31:23] 2025-10-13 14:30:58,457 [wrapper] ==== wrapper stdout END ====
[2025-10-13 10:31:23] 2025-10-13 14:30:58,462 [wrapper] ==== wrapper stderr END ====
[2025-10-13 10:31:23]  *** Error codes and diagnostics ***
[2025-10-13 10:31:23]     "exeErrorCode": 0,
[2025-10-13 10:31:23]     "exeErrorDiag": "",
[2025-10-13 10:31:23]     "pilotErrorCode": 0,
[2025-10-13 10:31:23]     "pilotErrorDiag": "",
[2025-10-13 10:31:23]  *** Listing of results directory ***
[2025-10-13 10:31:23] total 412732
[2025-10-13 10:31:23] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 17:31 pilot3.tar.gz
[2025-10-13 10:31:23] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 17:48 queuedata.json
[2025-10-13 10:31:23] -rwx------. 1 boincer umatlas     36292 Oct 12 17:49 runpilot2-wrapper.sh
[2025-10-13 10:31:23] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 10:31:23] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:01 run_atlas
[2025-10-13 10:31:23] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:01 job.xml
[2025-10-13 10:31:23] -rw-r--r--. 2 boincer umatlas 219626182 Oct 13 00:01 EVNT.46676267._004842.pool.root.1
[2025-10-13 10:31:23] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:01 start_atlas.sh
[2025-10-13 10:31:23] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:01 shared
[2025-10-13 10:31:23] -rw-r--r--. 2 boincer umatlas    569682 Oct 13 00:01 input.tar.gz
[2025-10-13 10:31:23] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:01 boinc_lockfile
[2025-10-13 10:31:23] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:01 pandaJob.out
[2025-10-13 10:31:23] -rw-------. 1 boincer umatlas    974373 Oct 13 00:03 agis_schedconf.cvmfs.json
[2025-10-13 10:31:23] drwx------. 5 boincer umatlas      4096 Oct 13 00:03 pilot3
[2025-10-13 10:31:23] -rw-------. 1 boincer umatlas 188930077 Oct 13 10:26 HITS.46676269._090349.pool.root.1
[2025-10-13 10:31:23] -rw-r--r--. 1 boincer umatlas       530 Oct 13 10:26 boinc_task_state.xml
[2025-10-13 10:31:23] -rw-r--r--. 1 boincer umatlas      6659 Oct 13 10:28 init_data.xml
[2025-10-13 10:31:23] -rw-------. 1 boincer umatlas      1060 Oct 13 10:29 memory_monitor_summary.json
[2025-10-13 10:31:23] -rw-------. 1 boincer umatlas   1560580 Oct 13 10:29 agis_ddmendpoints.agis.ALL.json
[2025-10-13 10:31:23] -rw-------. 1 boincer umatlas    796757 Oct 13 10:29 log.46676269._090349.job.log.tgz.1
[2025-10-13 10:31:23] -rw-------. 1 boincer umatlas      7856 Oct 13 10:29 heartbeat.json
[2025-10-13 10:31:23] -rw-------. 1 boincer umatlas        95 Oct 13 10:30 pilot_heartbeat.json
[2025-10-13 10:31:23] -rw-------. 1 boincer umatlas      5009 Oct 13 10:30 pilotlog.txt
[2025-10-13 10:31:23] -rw-------. 1 boincer umatlas   4294797 Oct 13 10:30 log.46676269._090349.job.log.1
[2025-10-13 10:31:23] -rw-------. 1 boincer umatlas       357 Oct 13 10:30 output.list
[2025-10-13 10:31:23] -rw-r--r--. 1 boincer umatlas       620 Oct 13 10:30 runtime_log
[2025-10-13 10:31:23] -rw-------. 1 boincer umatlas   5109760 Oct 13 10:30 result.tar.gz
[2025-10-13 10:31:23] -rw-------. 1 boincer umatlas       662 Oct 13 10:30 e5QKDmQ7IS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmF6UMDm56p6Qo.diag
[2025-10-13 10:31:23] -rw-r--r--. 1 boincer umatlas      8701 Oct 13 10:30 runtime_log.err
[2025-10-13 10:31:23] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 10:31 boinc_mmap_file
[2025-10-13 10:31:23] -rw-r--r--. 1 boincer umatlas        27 Oct 13 10:31 wrapper_checkpoint.txt
[2025-10-13 10:31:23] -rw-r--r--. 1 boincer umatlas     21056 Oct 13 10:31 stderr.txt
[2025-10-13 10:31:23] HITS file was successfully produced:
[2025-10-13 10:31:23] -rw-------. 1 boincer umatlas 188930077 Oct 13 10:26 shared/HITS.pool.root.1
[2025-10-13 10:31:23]  *** Contents of shared directory: ***
[2025-10-13 10:31:23] total 404556
[2025-10-13 10:31:23] -rw-r--r--. 2 boincer umatlas 219626182 Oct 13 00:01 ATLAS.root_0
[2025-10-13 10:31:23] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:01 start_atlas.sh
[2025-10-13 10:31:23] -rw-r--r--. 2 boincer umatlas    569682 Oct 13 00:01 input.tar.gz
[2025-10-13 10:31:23] -rw-------. 1 boincer umatlas 188930077 Oct 13 10:26 HITS.pool.root.1
[2025-10-13 10:31:23] -rw-------. 1 boincer umatlas   5109760 Oct 13 10:30 result.tar.gz
10:31:25 (1112777): run_atlas exited; CPU time 51063.470681
10:31:25 (1112777): called boinc_finish(0)

</stderr_txt>
]]>

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