Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:12:30 (21598): wrapper (7.7.26015): starting
14:12:30 (21598): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 14:12:30] Arguments: --nthreads 8
[2025-10-13 14:12:30] Threads: 8
[2025-10-13 14:12:30] Checking for CVMFS
[2025-10-13 14:12:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 14:12:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 14:12:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 14:12:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 14:12:33] 2.11.2.0 9407 221820 139348 151660 3 61 25063989 25165824 4632 130560 0 104106151 99.862 63704164 3078 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 14:12:33] CVMFS is ok
[2025-10-13 14:12:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 14:12:33] Checking for apptainer binary...
[2025-10-13 14:12:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 14:12:33] Running /usr/bin/apptainer --version
[2025-10-13 14:12:33] apptainer version 1.3.2-1.el7
[2025-10-13 14:12:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 14:12:48] cg-vwn416.simple-grid.lan
[2025-10-13 14:12:48] apptainer works
[2025-10-13 14:12:48] Set ATHENA_PROC_NUMBER=8
[2025-10-13 14:12:48] Set ATHENA_CORE_NUMBER=8
[2025-10-13 14:12:48] Starting ATLAS job with PandaID=6837367372
[2025-10-13 14:12:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 18:32:53]  *** The last 200 lines of the pilot log: ***
[2025-10-13 18:32:53] 2025-10-13 16:32:12,698 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 18:32:53] 2025-10-13 16:32:12,698 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 18:32:53] 2025-10-13 16:32:12,703 | INFO     | fitting pss+swap vs Time
[2025-10-13 18:32:53] 2025-10-13 16:32:12,703 | INFO     | sum of square deviations: 4394577280.5
[2025-10-13 18:32:53] 2025-10-13 16:32:12,705 | INFO     | sum of deviations: 49634004382.999985
[2025-10-13 18:32:53] 2025-10-13 16:32:12,706 | INFO     | mean x: 1760365615.5
[2025-10-13 18:32:53] 2025-10-13 16:32:12,706 | INFO     | mean y: 2471603.487603306
[2025-10-13 18:32:53] 2025-10-13 16:32:12,706 | INFO     | -- intersect: -19879758039.648483
[2025-10-13 18:32:53] 2025-10-13 16:32:12,706 | INFO     | intersect: -19879758039.648483
[2025-10-13 18:32:53] 2025-10-13 16:32:12,706 | INFO     | chi2: 6.980571820655422
[2025-10-13 18:32:53] 2025-10-13 16:32:12,707 | INFO     | sum of square deviations: 4127772278.0
[2025-10-13 18:32:53] 2025-10-13 16:32:12,709 | INFO     | sum of deviations: 65782870126.99998
[2025-10-13 18:32:53] 2025-10-13 16:32:12,709 | INFO     | mean x: 1760365463.0
[2025-10-13 18:32:53] 2025-10-13 16:32:12,709 | INFO     | mean y: 2480670.388185654
[2025-10-13 18:32:53] 2025-10-13 16:32:12,709 | INFO     | -- intersect: -28051851019.802303
[2025-10-13 18:32:53] 2025-10-13 16:32:12,709 | INFO     | intersect: -28051851019.802303
[2025-10-13 18:32:53] 2025-10-13 16:32:12,710 | INFO     | chi2: 6.174625295830069
[2025-10-13 18:32:53] 2025-10-13 16:32:12,710 | INFO     | current chi2=6.174625295830069 (change=11.545565972698226 %)
[2025-10-13 18:32:53] 2025-10-13 16:32:12,710 | INFO     | right removable region: 236
[2025-10-13 18:32:53] 2025-10-13 16:32:12,710 | INFO     | sum of square deviations: 4127772278.0
[2025-10-13 18:32:53] 2025-10-13 16:32:12,713 | INFO     | sum of deviations: -32981527580.000008
[2025-10-13 18:32:53] 2025-10-13 16:32:12,713 | INFO     | mean x: 1760365768.0
[2025-10-13 18:32:53] 2025-10-13 16:32:12,713 | INFO     | mean y: 2518785.2742616036
[2025-10-13 18:32:53] 2025-10-13 16:32:12,713 | INFO     | -- intersect: 14068108701.080149
[2025-10-13 18:32:53] 2025-10-13 16:32:12,713 | INFO     | intersect: 14068108701.080149
[2025-10-13 18:32:53] 2025-10-13 16:32:12,714 | INFO     | chi2: 2.383492736577037
[2025-10-13 18:32:53] 2025-10-13 16:32:12,714 | INFO     | current chi2=2.383492736577037 (change=65.85533681461004 %)
[2025-10-13 18:32:53] 2025-10-13 16:32:12,718 | INFO     | sum of square deviations: 3871990738.0
[2025-10-13 18:32:53] 2025-10-13 16:32:12,719 | INFO     | sum of deviations: -71340554568.0
[2025-10-13 18:32:53] 2025-10-13 16:32:12,720 | INFO     | mean x: 1760365920.5
[2025-10-13 18:32:53] 2025-10-13 16:32:12,720 | INFO     | mean y: 2541504.6379310344
[2025-10-13 18:32:53] 2025-10-13 16:32:12,720 | INFO     | -- intersect: 32436885879.115047
[2025-10-13 18:32:53] 2025-10-13 16:32:12,720 | INFO     | intersect: 32436885879.115047
[2025-10-13 18:32:53] 2025-10-13 16:32:12,720 | INFO     | chi2: 1.1189923259519305
[2025-10-13 18:32:53] 2025-10-13 16:32:12,721 | INFO     | current chi2=1.1189923259519305 (change=53.05241300802413 %)
[2025-10-13 18:32:53] 2025-10-13 16:32:12,721 | INFO     | sum of square deviations: 3627000098.0
[2025-10-13 18:32:53] 2025-10-13 16:32:12,723 | INFO     | sum of deviations: -69647386230.0
[2025-10-13 18:32:53] 2025-10-13 16:32:12,723 | INFO     | mean x: 1760366073.0
[2025-10-13 18:32:53] 2025-10-13 16:32:12,723 | INFO     | mean y: 2540416.4669603524
[2025-10-13 18:32:53] 2025-10-13 16:32:12,723 | INFO     | -- intersect: 33805929575.46537
[2025-10-13 18:32:53] 2025-10-13 16:32:12,723 | INFO     | intersect: 33805929575.46537
[2025-10-13 18:32:53] 2025-10-13 16:32:12,724 | INFO     | chi2: 1.1022063016399966
[2025-10-13 18:32:53] 2025-10-13 16:32:12,724 | INFO     | current chi2=1.1022063016399966 (change=1.500101825779195 %)
[2025-10-13 18:32:53] 2025-10-13 16:32:12,724 | INFO     | left removable region: 30
[2025-10-13 18:32:53] 2025-10-13 16:32:12,724 | INFO     | sum of square deviations: 2710627567.5
[2025-10-13 18:32:53] 2025-10-13 16:32:12,726 | INFO     | sum of deviations: -31287743294.5
[2025-10-13 18:32:53] 2025-10-13 16:32:12,726 | INFO     | mean x: 1760366347.5
[2025-10-13 18:32:53] 2025-10-13 16:32:12,726 | INFO     | mean y: 2536967.674757282
[2025-10-13 18:32:53] 2025-10-13 16:32:12,726 | INFO     | -- intersect: 20321776336.901226
[2025-10-13 18:32:53] 2025-10-13 16:32:12,726 | INFO     | intersect: 20321776336.901226
[2025-10-13 18:32:53] 2025-10-13 16:32:12,727 | INFO     | chi2: 0.1720852508650902
[2025-10-13 18:32:53] 2025-10-13 16:32:12,727 | INFO     | -- intersect: 20321776336.901226
[2025-10-13 18:32:53] 2025-10-13 16:32:12,727 | INFO     | current memory leak: -11.54 B/s (using 206 data points, chi2=0.17)
[2025-10-13 18:32:53] 2025-10-13 16:32:12,728 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 18:32:53] 2025-10-13 16:32:12,732 | INFO     | ..............................
[2025-10-13 18:32:53] 2025-10-13 16:32:12,732 | INFO     | . Timing measurements:
[2025-10-13 18:32:53] 2025-10-13 16:32:12,733 | INFO     | . get job = 0 s
[2025-10-13 18:32:53] 2025-10-13 16:32:12,733 | INFO     | . initial setup = 8 s
[2025-10-13 18:32:53] 2025-10-13 16:32:12,733 | INFO     | . payload setup = 129 s
[2025-10-13 18:32:53] 2025-10-13 16:32:12,733 | INFO     | . stage-in = 0 s
[2025-10-13 18:32:53] 2025-10-13 16:32:12,733 | INFO     | . payload execution = 14930 s
[2025-10-13 18:32:53] 2025-10-13 16:32:12,733 | INFO     | . stage-out = 3 s
[2025-10-13 18:32:53] 2025-10-13 16:32:12,733 | INFO     | . log creation = 1 s
[2025-10-13 18:32:53] 2025-10-13 16:32:12,733 | INFO     | ..............................
[2025-10-13 18:32:53] 2025-10-13 16:32:13,254 | INFO     | 
[2025-10-13 18:32:53] 2025-10-13 16:32:13,254 | INFO     | job summary report
[2025-10-13 18:32:53] 2025-10-13 16:32:13,255 | INFO     | --------------------------------------------------
[2025-10-13 18:32:53] 2025-10-13 16:32:13,255 | INFO     | PanDA job id: 6837367372
[2025-10-13 18:32:53] 2025-10-13 16:32:13,255 | INFO     | task id: 46676269
[2025-10-13 18:32:53] 2025-10-13 16:32:13,255 | INFO     | errors: (none)
[2025-10-13 18:32:53] 2025-10-13 16:32:13,255 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 18:32:53] 2025-10-13 16:32:13,255 | INFO     | pilot state: finished 
[2025-10-13 18:32:53] 2025-10-13 16:32:13,255 | INFO     | transexitcode: 0
[2025-10-13 18:32:53] 2025-10-13 16:32:13,255 | INFO     | exeerrorcode: 0
[2025-10-13 18:32:53] 2025-10-13 16:32:13,255 | INFO     | exeerrordiag: 
[2025-10-13 18:32:53] 2025-10-13 16:32:13,255 | INFO     | exitcode: 0
[2025-10-13 18:32:53] 2025-10-13 16:32:13,255 | INFO     | exitmsg: OK
[2025-10-13 18:32:53] 2025-10-13 16:32:13,255 | INFO     | cpuconsumptiontime: 54783 s
[2025-10-13 18:32:53] 2025-10-13 16:32:13,255 | INFO     | nevents: 400
[2025-10-13 18:32:53] 2025-10-13 16:32:13,256 | INFO     | neventsw: 0
[2025-10-13 18:32:53] 2025-10-13 16:32:13,256 | INFO     | pid: 31968
[2025-10-13 18:32:53] 2025-10-13 16:32:13,256 | INFO     | pgrp: 31968
[2025-10-13 18:32:53] 2025-10-13 16:32:13,256 | INFO     | corecount: 8
[2025-10-13 18:32:53] 2025-10-13 16:32:13,256 | INFO     | event service: False
[2025-10-13 18:32:53] 2025-10-13 16:32:13,256 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 23: 2348913, 33: 2348941, 44: 2348997, 55: 2349153, 65: 2349181, 76: 2349209, 87: 2349265, 89: 2349555, 98: 2349863, 1
[2025-10-13 18:32:53] 2025-10-13 16:32:13,256 | INFO     | --------------------------------------------------
[2025-10-13 18:32:53] 2025-10-13 16:32:13,256 | INFO     | 
[2025-10-13 18:32:53] 2025-10-13 16:32:13,256 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-10-13 18:32:53] 2025-10-13 16:32:13,481 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 18:32:53] 2025-10-13 16:32:13,481 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 18:32:53] 2025-10-13 16:32:13,481 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 18:32:53] 2025-10-13 16:32:13,482 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 18:32:53] 2025-10-13 16:32:13,482 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 18:32:53] 2025-10-13 16:32:13,482 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 18:32:53] 2025-10-13 16:32:13,482 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 18:32:53] 2025-10-13 16:32:13,482 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 18:32:53] 2025-10-13 16:32:13,482 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 18:32:53] 2025-10-13 16:32:13,482 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 18:32:53] 2025-10-13 16:32:13,482 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 18:32:53] 2025-10-13 16:32:13,482 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 18:32:53] 2025-10-13 16:32:13,482 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 18:32:53] 2025-10-13 16:32:13,483 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 18:32:53] 2025-10-13 16:32:13,483 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 18:32:53] 2025-10-13 16:32:13,483 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 18:32:53] 2025-10-13 16:32:13,483 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 18:32:53] 2025-10-13 16:32:13,483 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 18:32:53] 2025-10-13 16:32:13,483 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 18:32:53] 2025-10-13 16:32:13,483 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 18:32:53] 2025-10-13 16:32:13,483 | INFO     | job 6837367372 has completed (purged errors)
[2025-10-13 18:32:53] 2025-10-13 16:32:13,484 | INFO     | overall cleanup function is called
[2025-10-13 18:32:53] 2025-10-13 16:32:14,491 | INFO     | --- collectZombieJob: --- 10, [31968]
[2025-10-13 18:32:53] 2025-10-13 16:32:14,491 | INFO     | zombie collector waiting for pid 31968
[2025-10-13 18:32:53] 2025-10-13 16:32:14,492 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 18:32:53] 2025-10-13 16:32:14,492 | INFO     | collected zombie processes
[2025-10-13 18:32:53] 2025-10-13 16:32:14,492 | INFO     | will attempt to kill all subprocesses of pid=31968
[2025-10-13 18:32:53] 2025-10-13 16:32:14,622 | INFO     | process IDs to be killed: [31968] (in reverse order)
[2025-10-13 18:32:53] 2025-10-13 16:32:15,560 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 18:32:53] 2025-10-13 16:32:15,560 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 18:32:53] 2025-10-13 16:32:15,564 | INFO     | did not find any defunct processes belonging to 31968
[2025-10-13 18:32:53] 2025-10-13 16:32:15,567 | INFO     | did not find any defunct processes belonging to 31968
[2025-10-13 18:32:53] 2025-10-13 16:32:15,567 | INFO     | ready for new job
[2025-10-13 18:32:53] 2025-10-13 16:32:15,567 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 18:32:53] 2025-10-13 16:32:15,570 | INFO     | ***************************************
[2025-10-13 18:32:53] 2025-10-13 16:32:15,570 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 18:32:53] 2025-10-13 16:32:15,570 | INFO     | ***************************************
[2025-10-13 18:32:53] 2025-10-13 16:32:15,570 | INFO     | 
[2025-10-13 18:32:53] 2025-10-13 16:32:15,571 | INFO     | pilot is running in a VM
[2025-10-13 18:32:53] 2025-10-13 16:32:15,571 | INFO     | architecture information:
[2025-10-13 18:32:53] 2025-10-13 16:32:15,585 | INFO     | executing command: cat /etc/os-release
[2025-10-13 18:32:53] 2025-10-13 16:32:15,847 | INFO     | cat /etc/os-release:
[2025-10-13 18:32:53] NAME="CentOS Linux"
[2025-10-13 18:32:53] VERSION="7 (Core)"
[2025-10-13 18:32:53] ID="centos"
[2025-10-13 18:32:53] ID_LIKE="rhel fedora"
[2025-10-13 18:32:53] VERSION_ID="7"
[2025-10-13 18:32:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 18:32:53] ANSI_COLOR="0;31"
[2025-10-13 18:32:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 18:32:53] HOME_URL="https://www.centos.org/"
[2025-10-13 18:32:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 18:32:53] 
[2025-10-13 18:32:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 18:32:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 18:32:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 18:32:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 18:32:53] 
[2025-10-13 18:32:53] 2025-10-13 16:32:15,847 | INFO     | ***************************************
[2025-10-13 18:32:53] 2025-10-13 16:32:16,350 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-10-13 18:32:53] 2025-10-13 16:32:16,561 | INFO     | sufficient remaining disk space (496134782976 B)
[2025-10-13 18:32:53] 2025-10-13 16:32:16,561 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 18:32:53] 2025-10-13 16:32:16,562 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 18:32:53] 2025-10-13 16:32:16,562 | INFO     | update_server=False
[2025-10-13 18:32:53] 2025-10-13 16:32:16,562 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 18:32:53] 2025-10-13 16:32:16,562 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 18:32:53] 2025-10-13 16:32:16,563 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 18:32:53] 2025-10-13 16:32:16,563 | INFO     | aborting loop
[2025-10-13 18:32:53] 2025-10-13 16:32:16,568 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 18:32:53] 2025-10-13 16:32:16,645 | INFO     | all data control threads have been joined
[2025-10-13 18:32:53] 2025-10-13 16:32:17,304 | INFO     | all payload control threads have been joined
[2025-10-13 18:32:53] 2025-10-13 16:32:17,420 | INFO     | all job control threads have been joined
[2025-10-13 18:32:53] 2025-10-13 16:32:17,568 | INFO     | [job] retrieve thread has finished
[2025-10-13 18:32:53] 2025-10-13 16:32:17,569 | INFO     | [job] job monitor thread has finished
[2025-10-13 18:32:53] 2025-10-13 16:32:17,647 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 18:32:53] 2025-10-13 16:32:17,651 | INFO     | [data] control thread has finished
[2025-10-13 18:32:53] 2025-10-13 16:32:17,659 | INFO     | [job] validate thread has finished
[2025-10-13 18:32:53] 2025-10-13 16:32:17,730 | INFO     | [payload] failed_post thread has finished
[2025-10-13 18:32:53] 2025-10-13 16:32:17,901 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 18:32:53] 2025-10-13 16:32:17,970 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 18:32:53] 2025-10-13 16:32:17,995 | INFO     | [payload] validate_post thread has finished
[2025-10-13 18:32:53] 2025-10-13 16:32:18,178 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 18:32:53] 2025-10-13 16:32:18,307 | INFO     | [data] copytool_in thread has finished
[2025-10-13 18:32:53] 2025-10-13 16:32:18,311 | INFO     | [payload] control thread has finished
[2025-10-13 18:32:53] 2025-10-13 16:32:18,426 | INFO     | [job] control thread has finished
[2025-10-13 18:32:53] 2025-10-13 16:32:18,576 | INFO     | [data] copytool_out thread has finished
[2025-10-13 18:32:53] 2025-10-13 16:32:18,582 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 18:32:53] 2025-10-13 16:32:18,907 | INFO     | [job] queue monitor thread has finished
[2025-10-13 18:32:53] 2025-10-13 16:32:20,571 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 18:32:53] 2025-10-13 16:32:41,891 | INFO     | [monitor] cgroup control has ended
[2025-10-13 18:32:53] 2025-10-13 16:32:42,752 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140171055470400)>', '<ExcThread(monitor, started 140170468775680)>']
[2025-10-13 18:32:53] 2025-10-13 16:32:45,407 | INFO     | PID=25401 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 18:32:53] 2025-10-13 16:32:45,407 | INFO     | .. there are 9 such processes running
[2025-10-13 18:32:53] 2025-10-13 16:32:45,408 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 18:32:53] 2025-10-13 16:32:45,409 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 18:32:53] 2025-10-13 16:32:45,409 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 18:32:53] 2025-10-13 16:32:45,409 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 18:32:53] 2025-10-13 16:32:45,409 | INFO     | [monitor] control thread has ended
[2025-10-13 18:32:53] 2025-10-13 16:32:47,778 | INFO     | all workflow threads have been joined
[2025-10-13 18:32:53] 2025-10-13 16:32:47,778 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 18:32:53] 2025-10-13 16:32:47,779 | INFO     | traces error code: 0
[2025-10-13 18:32:53] 2025-10-13 16:32:47,779 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 18:32:53] 2025-10-13 16:32:48,182 [wrapper] ==== pilot stdout END ====
[2025-10-13 18:32:53] 2025-10-13 16:32:48,292 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 18:32:53] 2025-10-13 16:32:48,440 [wrapper] pilotpid: 25401
[2025-10-13 18:32:53] 2025-10-13 16:32:48,531 [wrapper] Pilot exit status: 0
[2025-10-13 18:32:53] 2025-10-13 16:32:48,977 [wrapper] pandaids: 6837367372
[2025-10-13 18:32:53] 2025-10-13 16:32:49,822 [wrapper] cleanup supervisor_pilot 25512 25402
[2025-10-13 18:32:53] 2025-10-13 16:32:49,894 [wrapper] Test setup, not cleaning
[2025-10-13 18:32:53] 2025-10-13 16:32:50,001 [wrapper] apfmon messages muted
[2025-10-13 18:32:53] 2025-10-13 16:32:50,035 [wrapper] ==== wrapper stdout END ====
[2025-10-13 18:32:53] 2025-10-13 16:32:50,102 [wrapper] ==== wrapper stderr END ====
[2025-10-13 18:32:53]  *** Error codes and diagnostics ***
[2025-10-13 18:32:53]     "exeErrorCode": 0,
[2025-10-13 18:32:53]     "exeErrorDiag": "",
[2025-10-13 18:32:53]     "pilotErrorCode": 0,
[2025-10-13 18:32:53]     "pilotErrorDiag": "",
[2025-10-13 18:32:53]  *** Listing of results directory ***
[2025-10-13 18:32:53] total 417544
[2025-10-13 18:32:53] -rw-r--r--. 1 boinc boinc    557409 Oct 10 00:55 pilot3.tar.gz
[2025-10-13 18:32:53] -rw-r--r--. 1 boinc boinc      5112 Oct 10 01:13 queuedata.json
[2025-10-13 18:32:53] -rwx------. 1 boinc boinc     36292 Oct 10 01:13 runpilot2-wrapper.sh
[2025-10-13 18:32:53] -rw-r--r--. 1 boinc boinc       100 Oct 13 14:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 18:32:53] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 14:12 run_atlas
[2025-10-13 18:32:53] -rw-r--r--. 1 boinc boinc       105 Oct 13 14:12 job.xml
[2025-10-13 18:32:53] -rw-r--r--. 2 boinc boinc 220452853 Oct 13 14:12 EVNT.46676267._001168.pool.root.1
[2025-10-13 18:32:53] -rw-r--r--. 2 boinc boinc     15120 Oct 13 14:12 start_atlas.sh
[2025-10-13 18:32:53] drwxrwx--x. 2 boinc boinc        68 Oct 13 14:12 shared
[2025-10-13 18:32:53] -rw-r--r--. 2 boinc boinc    569681 Oct 13 14:12 input.tar.gz
[2025-10-13 18:32:53] -rw-r--r--. 1 boinc boinc      6390 Oct 13 14:12 init_data.xml
[2025-10-13 18:32:53] -rw-r--r--. 1 boinc boinc         0 Oct 13 14:12 boinc_lockfile
[2025-10-13 18:32:53] -rw-r--r--. 1 boinc boinc      2550 Oct 13 14:12 pandaJob.out
[2025-10-13 18:32:53] -rw-------. 1 boinc boinc    972497 Oct 13 14:16 agis_schedconf.cvmfs.json
[2025-10-13 18:32:53] drwx------. 5 boinc boinc      4096 Oct 13 14:16 pilot3
[2025-10-13 18:32:53] -rw-------. 1 boinc boinc 198200093 Oct 13 18:29 HITS.46676269._027813.pool.root.1
[2025-10-13 18:32:53] -rw-r--r--. 1 boinc boinc       531 Oct 13 18:29 boinc_task_state.xml
[2025-10-13 18:32:53] -rw-------. 1 boinc boinc      1018 Oct 13 18:30 memory_monitor_summary.json
[2025-10-13 18:32:53] -rw-------. 1 boinc boinc   1560580 Oct 13 18:30 agis_ddmendpoints.agis.ALL.json
[2025-10-13 18:32:53] -rw-------. 1 boinc boinc    460121 Oct 13 18:30 log.46676269._027813.job.log.tgz.1
[2025-10-13 18:32:53] -rw-------. 1 boinc boinc      7787 Oct 13 18:32 heartbeat.json
[2025-10-13 18:32:53] -rw-r--r--. 1 boinc boinc      8192 Oct 13 18:32 boinc_mmap_file
[2025-10-13 18:32:53] -rw-r--r--. 1 boinc boinc        28 Oct 13 18:32 wrapper_checkpoint.txt
[2025-10-13 18:32:53] -rw-------. 1 boinc boinc        95 Oct 13 18:32 pilot_heartbeat.json
[2025-10-13 18:32:53] -rw-------. 1 boinc boinc      4884 Oct 13 18:32 pilotlog.txt
[2025-10-13 18:32:53] -rw-------. 1 boinc boinc   2052499 Oct 13 18:32 log.46676269._027813.job.log.1
[2025-10-13 18:32:53] -rw-------. 1 boinc boinc       357 Oct 13 18:32 output.list
[2025-10-13 18:32:53] -rw-r--r--. 1 boinc boinc       620 Oct 13 18:32 runtime_log
[2025-10-13 18:32:53] -rw-------. 1 boinc boinc   2529280 Oct 13 18:32 result.tar.gz
[2025-10-13 18:32:53] -rw-r--r--. 1 boinc boinc      8703 Oct 13 18:32 runtime_log.err
[2025-10-13 18:32:53] -rw-------. 1 boinc boinc       657 Oct 13 18:32 EKPKDmp0ER8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIbbNDmB9PcRo.diag
[2025-10-13 18:32:53] -rw-r--r--. 1 boinc boinc     20610 Oct 13 18:32 stderr.txt
[2025-10-13 18:32:53] HITS file was successfully produced:
[2025-10-13 18:32:53] -rw-------. 1 boinc boinc 198200093 Oct 13 18:29 shared/HITS.pool.root.1
[2025-10-13 18:32:53]  *** Contents of shared directory: ***
[2025-10-13 18:32:53] total 411892
[2025-10-13 18:32:53] -rw-r--r--. 2 boinc boinc 220452853 Oct 13 14:12 ATLAS.root_0
[2025-10-13 18:32:53] -rw-r--r--. 2 boinc boinc     15120 Oct 13 14:12 start_atlas.sh
[2025-10-13 18:32:53] -rw-r--r--. 2 boinc boinc    569681 Oct 13 14:12 input.tar.gz
[2025-10-13 18:32:53] -rw-------. 1 boinc boinc 198200093 Oct 13 18:29 HITS.pool.root.1
[2025-10-13 18:32:53] -rw-------. 1 boinc boinc   2529280 Oct 13 18:32 result.tar.gz
18:32:54 (21598): run_atlas exited; CPU time 54994.225823
18:32:54 (21598): called boinc_finish(0)

</stderr_txt>
]]>

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